Spo03436.1 (mRNA) | SpinachBase

Overview


Name	Spo03436.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Peptidyl-prolyl cis-trans isomerase (5.2.1.8)
Location	SpoScf_22293 : 66 .. 1481 (-)
Sequence length	712

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTTGGTATAAGCCTCCATTAGAAAAGAAAATTGAAGGATAGGAAAATAAAATAAAATTGACTGATAGTAGGTGTTGGTGTCCTCTCTTTCTTATGTGAGGTGTTTGGGGTTTGAGATCTGCTGCCTTGTGGGAGAATGAAGGGTTTAAAGACATTTTTATTTGTTGAACTTTTTGTTTCCTTTTGAAAATTTAGGGTGAAAACTGAATGTGATGTTTAATTGTTGGAAATTTCAGGGTAGCTTCTGCAATACTCGTTTTCATGTTCAAAGATTGCCTATGATGACTAGCATGACCACTGTGCCACAATTTCAACGTCTGTCTGCTTCTGCAAGGTACTCAGAATGCAGGTTGTCATCGACAAATCTTTCTGCATCAGCCTTTGGCTGTAAAATATCGAAGACATCTTCAATCCCACATCGTAGTATTCGATGTATGAGCACCGAAACTGATGTGAGTTTCCTCTTTATTTACTTTTATCAATTGTACTTCATTTTGGATACATATAATGTTAACTGTGGGGATATTGAGATCAGTCATCAACTCATCATTATCAATGAGCTAGGGGCATTTTGGTGCATTTTGAAGGAAAAGACAGACCAAAACAAAATTCACCTGTCTTCGGTTTTTCAGTATTAAGATTCCTCATTCTCTTTGATGCATGGAAGTAAGGAAGGACAATTGAAAGTATGGAAAGAATCAAGGTTCTTCTAGAACCATCAAAGTTGAATATCTGGGTTAGAGTTATCACATAGTATGGAAAGAATCAAGGTTCTTCTAGAACCATCAAAGTTGAATATCTGGGTTAGAGTTATCACATACATGAGCAAGTAATATTTTAATTATAACTTGGGTATGCTTATGTATCATTGGCTCCACTATCTAGTTTCCTACTACTGCTACTTGCAAGAACTGTGTGTAAGTAGGTTTATCTTTTCGTGTATTCAGTGGCTACTTACATAATGTGTAATTTCCCGGCATGAAAAAATAACAGCTTGGAGATAGTGAGTATTTTTGGCGCACTATTTCATTTGATGTCTGTAAAATTGATTGCCGCATCAACATTTTCAGAACTTCAAGTTAGGTCTTTATATATGTTTAGTTGGTATGCAGATTATACTTCATGGTTTGTGATGTAAAATTTACTTTGTGATTAGGTTCAAGACGTGCAAGCAGAAGTGACCAGTAAAGTCTTCTTTGATGTAGACATTGGTGGGGAGCAAGTGGGAAGAATTGTTATGGGCTTATTTGGAGGTGTGGTTCCTAAAACTGCTGAGAACTTCCGTGTCCTATGCACAGGTAAGATTTATTTTTGTAACGTATCTTGCATCCTGTAATTCCTCTTTTTTGCTGTGTATTTATTGTTATCTTGTCTAGATGTAATGCGACAAAGAATATCTTTGCAACTAAGTGAC

mRNA sequence

AAGGTTGGTATAAGCCTCCATTAGAAAAGAAAATTGAAGGATAGGAAAATAAAATAAAATTGACTGATAGTAGGTGTTGGTGTCCTCTCTTTCTTATGTGAGGTGTTTGGGGTTTGAGATCTGCTGCCTTGTGGGAGAATGAAGGGTTTAAAGACATTTTTATTTGTTGAACTTTTTGTTTCCTTTTGAAAATTTAGGGTGAAAACTGAATGTGATGTTTAATTGTTGGAAATTTCAGGGTAGCTTCTGCAATACTCGTTTTCATGTTCAAAGATTGCCTATGATGACTAGCATGACCACTGTGCCACAATTTCAACGTCTGTCTGCTTCTGCAAGGTACTCAGAATGCAGGTTGTCATCGACAAATCTTTCTGCATCAGCCTTTGGCTGTAAAATATCGAAGACATCTTCAATCCCACATCGTAGTATTCGATGTATGAGCACCGAAACTGATGTTCAAGACGTGCAAGCAGAAGTGACCAGTAAAGTCTTCTTTGATGTAGACATTGGTGGGGAGCAAGTGGGAAGAATTGTTATGGGCTTATTTGGAGGTGTGGTTCCTAAAACTGCTGAGAACTTCCGTGTCCTATGCACAGGTAAGATTTATTTTTGTAACGTATCTTGCATCCTGTAATTCCTCTTTTTTGCTGTGTATTTATTGTTATCTTGTCTAGATGTAATGCGACAAAGAATATCTTTGCAACTAAGTGAC

Coding sequence (CDS)

ATGTTTAATTGTTGGAAATTTCAGGGTAGCTTCTGCAATACTCGTTTTCATGTTCAAAGATTGCCTATGATGACTAGCATGACCACTGTGCCACAATTTCAACGTCTGTCTGCTTCTGCAAGGTACTCAGAATGCAGGTTGTCATCGACAAATCTTTCTGCATCAGCCTTTGGCTGTAAAATATCGAAGACATCTTCAATCCCACATCGTAGTATTCGATGTATGAGCACCGAAACTGATGTTCAAGACGTGCAAGCAGAAGTGACCAGTAAAGTCTTCTTTGATGTAGACATTGGTGGGGAGCAAGTGGGAAGAATTGTTATGGGCTTATTTGGAGGTGTGGTTCCTAAAACTGCTGAGAACTTCCGTGTCCTATGCACAGGTAAGATTTATTTTTGTAACGTATCTTGCATCCTGTAA

Protein sequence

MFNCWKFQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTGKIYFCNVSCIL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03436	Spo03436	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03436.1	Spo03436.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03436.1.utr5p.1	Spo03436.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03436.1.CDS.2	Spo03436.1.CDS.2	CDS
Spo03436.1.CDS.1	Spo03436.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03436.1.utr3p.1	Spo03436.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03436.1.exon.2	Spo03436.1.exon.2	exon
Spo03436.1.exon.1	Spo03436.1.exon.1	exon

Homology

[Close]

BLAST of Spo03436.1 vs. NCBI nr
Match: gi|902231058|gb|KNA22103.1| (hypothetical protein SOVF_036950 [Spinacia oleracea])

HSP 1 Score: 237.3 bits (604), Expect = 1.600e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1


		  
Query: 9   GSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIP 68
           GSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIP
Sbjct: 14  GSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIP 73

Query: 69  HRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTG 128
           HRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTG
Sbjct: 74  HRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTG 133

[Close]

BLAST of Spo03436.1 vs. NCBI nr
Match: gi|731323534|ref|XP_010672482.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase A1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 162.5 bits (410), Expect = 5.100e-37
Identity = 90/127 (70.87%), Postives = 99/127 (77.95%), Query Frame = 1


		  
Query: 3   NCWKFQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKIS 62
           N     GSFCN    VQRLPM+T MT V QF RL AS  YS+ RLSS +L+ASAFG KIS
Sbjct: 8   NLQAHMGSFCNNLSQVQRLPMITGMTNVQQFHRLPASVSYSKSRLSSRHLNASAFGYKIS 67

Query: 63  KTSSIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENF 122
           + SS  HRS RCMS+  DVQD+ AEVT+KVFFDVDIGGE VGRIVMGLFG VVPKTAENF
Sbjct: 68  EASS--HRSFRCMSS-ADVQDLGAEVTTKVFFDVDIGGEPVGRIVMGLFGDVVPKTAENF 127

Query: 123 RVLCTGK 130
           RVLCTG+
Sbjct: 128 RVLCTGE 131

[Close]

BLAST of Spo03436.1 vs. NCBI nr
Match: gi|641868058|gb|KDO86742.1| (hypothetical protein CISIN_1g024387mg [Citrus sinensis])

HSP 1 Score: 99.8 bits (247), Expect = 4.100e-18
Identity = 58/124 (46.77%), Postives = 83/124 (66.94%), Query Frame = 1


		  
Query: 7   FQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGC-KISKTS 66
           FQGS+     +V  LPM +S+T        +++ + S   L+S +  AS+F   ++SK  
Sbjct: 18  FQGSYSQGVANVCMLPMTSSITNSQSGHCPASTLKLSGRALTSRSHYASSFPIVQLSKAP 77

Query: 67  SIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVL 126
           S+ +R + C+++     ++QA+VT+KVFFDVDIGG+  GRIVMGLFG VVPKTAENFR L
Sbjct: 78  SVKYRRMFCVNSMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRAL 137

Query: 127 CTGK 130
           CTG+
Sbjct: 138 CTGE 141

[Close]

BLAST of Spo03436.1 vs. NCBI nr
Match: gi|567904308|ref|XP_006444642.1| (hypothetical protein CICLE_v10021681mg [Citrus clementina])

HSP 1 Score: 99.8 bits (247), Expect = 4.100e-18
Identity = 58/124 (46.77%), Postives = 83/124 (66.94%), Query Frame = 1


		  
Query: 7   FQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGC-KISKTS 66
           FQGS+     +V  LPM +S+T        +++ + S   L+S +  AS+F   ++SK  
Sbjct: 18  FQGSYSQGVANVCMLPMTSSITNSQSGHCPASTLKLSGRALTSRSHYASSFPIVQLSKAP 77

Query: 67  SIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVL 126
           S+ +R + C+++     ++QA+VT+KVFFDVDIGG+  GRIVMGLFG VVPKTAENFR L
Sbjct: 78  SVKYRRMFCVNSMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRAL 137

Query: 127 CTGK 130
           CTG+
Sbjct: 138 CTGE 141

[Close]

BLAST of Spo03436.1 vs. NCBI nr
Match: gi|567904310|ref|XP_006444643.1| (hypothetical protein CICLE_v10021681mg [Citrus clementina])

HSP 1 Score: 96.7 bits (239), Expect = 3.500e-17
Identity = 57/122 (46.72%), Postives = 81/122 (66.39%), Query Frame = 1


		  
Query: 7   FQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGC-KISKTS 66
           FQGS+     +V  LPM +S+T        +++ + S   L+S +  AS+F   ++SK  
Sbjct: 18  FQGSYSQGVANVCMLPMTSSITNSQSGHCPASTLKLSGRALTSRSHYASSFPIVQLSKAP 77

Query: 67  SIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVL 126
           S+ +R + C+++     ++QA+VT+KVFFDVDIGG+  GRIVMGLFG VVPKTAENFR L
Sbjct: 78  SVKYRRMFCVNSMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRAL 137

Query: 127 CT 128
           CT
Sbjct: 138 CT 139

[Close]

BLAST of Spo03436.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRM3_SPIOL (Peptidyl-prolyl cis-trans isomerase OS=Spinacia oleracea GN=SOVF_036950 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.100e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1


		  
Query: 9   GSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIP 68
           GSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIP
Sbjct: 14  GSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIP 73

Query: 69  HRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTG 128
           HRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTG
Sbjct: 74  HRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTG 133

[Close]

BLAST of Spo03436.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CUD8_BETVU (Peptidyl-prolyl cis-trans isomerase OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g059000 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.600e-37
Identity = 90/127 (70.87%), Postives = 99/127 (77.95%), Query Frame = 1


		  
Query: 3   NCWKFQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKIS 62
           N     GSFCN    VQRLPM+T MT V QF RL AS  YS+ RLSS +L+ASAFG KIS
Sbjct: 8   NLQAHMGSFCNNLSQVQRLPMITGMTNVQQFHRLPASVSYSKSRLSSRHLNASAFGYKIS 67

Query: 63  KTSSIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENF 122
           + SS  HRS RCMS+  DVQD+ AEVT+KVFFDVDIGGE VGRIVMGLFG VVPKTAENF
Sbjct: 68  EASS--HRSFRCMSS-ADVQDLGAEVTTKVFFDVDIGGEPVGRIVMGLFGDVVPKTAENF 127

Query: 123 RVLCTGK 130
           RVLCTG+
Sbjct: 128 RVLCTGE 131

[Close]

BLAST of Spo03436.1 vs. UniProtKB/TrEMBL
Match: A0A067HFI6_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g024387mg PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.900e-18
Identity = 58/124 (46.77%), Postives = 83/124 (66.94%), Query Frame = 1


		  
Query: 7   FQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGC-KISKTS 66
           FQGS+     +V  LPM +S+T        +++ + S   L+S +  AS+F   ++SK  
Sbjct: 18  FQGSYSQGVANVCMLPMTSSITNSQSGHCPASTLKLSGRALTSRSHYASSFPIVQLSKAP 77

Query: 67  SIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVL 126
           S+ +R + C+++     ++QA+VT+KVFFDVDIGG+  GRIVMGLFG VVPKTAENFR L
Sbjct: 78  SVKYRRMFCVNSMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRAL 137

Query: 127 CTGK 130
           CTG+
Sbjct: 138 CTGE 141

[Close]

BLAST of Spo03436.1 vs. UniProtKB/TrEMBL
Match: A0A067HFT8_CITSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus sinensis GN=CISIN_1g024387mg PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.900e-18
Identity = 58/124 (46.77%), Postives = 83/124 (66.94%), Query Frame = 1


		  
Query: 7   FQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGC-KISKTS 66
           FQGS+     +V  LPM +S+T        +++ + S   L+S +  AS+F   ++SK  
Sbjct: 18  FQGSYSQGVANVCMLPMTSSITNSQSGHCPASTLKLSGRALTSRSHYASSFPIVQLSKAP 77

Query: 67  SIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVL 126
           S+ +R + C+++     ++QA+VT+KVFFDVDIGG+  GRIVMGLFG VVPKTAENFR L
Sbjct: 78  SVKYRRMFCVNSMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRAL 137

Query: 127 CTGK 130
           CTG+
Sbjct: 138 CTGE 141

[Close]

BLAST of Spo03436.1 vs. UniProtKB/TrEMBL
Match: V4TWG4_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Citrus clementina GN=CICLE_v10021681mg PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.900e-18
Identity = 58/124 (46.77%), Postives = 83/124 (66.94%), Query Frame = 1


		  
Query: 7   FQGSFCNTRFHVQRLPMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGC-KISKTS 66
           FQGS+     +V  LPM +S+T        +++ + S   L+S +  AS+F   ++SK  
Sbjct: 18  FQGSYSQGVANVCMLPMTSSITNSQSGHCPASTLKLSGRALTSRSHYASSFPIVQLSKAP 77

Query: 67  SIPHRSIRCMSTETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVL 126
           S+ +R + C+++     ++QA+VT+KVFFDVDIGG+  GRIVMGLFG VVPKTAENFR L
Sbjct: 78  SVKYRRMFCVNSMAKDVELQAKVTTKVFFDVDIGGKPAGRIVMGLFGDVVPKTAENFRAL 137

Query: 127 CTGK 130
           CTG+
Sbjct: 138 CTGE 141

[Close]

BLAST of Spo03436.1 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.100e-14
Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = 1


		  
Query: 62  SKTSSIPHRSIRCMS-TETDVQDVQAEVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAE 121
           SK  SI  R I C S  + +V ++QA+VTSK+FFD++IGGE  GRIV+GLFG  VPKT E
Sbjct: 53  SKAKSITSRRITCASGAQGEVAELQAKVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVE 112

Query: 122 NFRVLCTG 129
           NF+ L TG
Sbjct: 113 NFKTLSTG 120

[Close]

BLAST of Spo03436.1 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.400e-13
Identity = 48/100 (48.00%), Postives = 61/100 (61.00%), Query Frame = 1


		  
Query: 34  QRLSASARYSECRLSSTNLSASAFGCKISKTSSIPHRSIRCMST----ETDVQDVQAEVT 93
           Q +   AR S   LSS    AS         ++  H+   C+ +    E +V + QA+VT
Sbjct: 35  QSVCFGARSSGIALSSRLHYASPIKQFSGVYATTKHQRTACVKSMAAEEEEVIEPQAKVT 94

Query: 94  SKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           +KV+FDV+IGGE  GRIVMGLFG VVPKT ENFR LCTG+
Sbjct: 95  NKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGE 134

[Close]

BLAST of Spo03436.1 vs. ExPASy Swiss-Prot
Match: CP21A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP21-1 OS=Arabidopsis thaliana GN=CYP21-1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.100e-10
Identity = 29/43 (67.44%), Postives = 38/43 (88.37%), Query Frame = 1


		  
Query: 87  EVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           E+T++VF DVDI G+++GRIV+GL+G VVPKT ENFR LCTG+
Sbjct: 44  EITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGE 86

[Close]

BLAST of Spo03436.1 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.100e-10
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1


		  
Query: 87  EVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           EVT KV+FDV+I G+  GR+V+GLFG  VPKTAENFR LCTG+
Sbjct: 29  EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGE 71

[Close]

BLAST of Spo03436.1 vs. ExPASy Swiss-Prot
Match: PNSL5_ARATH (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana GN=PNSL5 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.400e-10
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1


		  
Query: 22  PMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIPHRSIRCMSTETDV 81
           P+ TS  T   F+  + S+  S    SST  SAS+     S T     R+ RC S +++ 
Sbjct: 23  PINTSAFTSTSFRLRTKSSFDSISFSSSTPFSASSLLLHTSYTK----RNHRCFSVQSNA 82

Query: 82  QDV---QAEVTSKVFFDVDIG---GEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           + V   Q+++T KV+FD+ +G   G+  GRIV+GL+G  VP+T ENFR LCTG+
Sbjct: 83  EVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGE 132

[Close]

BLAST of Spo03436.1 vs. TAIR (Arabidopsis)
Match: AT3G62030.2 (rotamase CYP 4)

HSP 1 Score: 77.4 bits (189), Expect = 7.700e-15
Identity = 48/100 (48.00%), Postives = 61/100 (61.00%), Query Frame = 1


		  
Query: 34  QRLSASARYSECRLSSTNLSASAFGCKISKTSSIPHRSIRCMST----ETDVQDVQAEVT 93
           Q +   AR S   LSS    AS         ++  H+   C+ +    E +V + QA+VT
Sbjct: 88  QSVCFGARSSGIALSSRLHYASPIKQFSGVYATTKHQRTACVKSMAAEEEEVIEPQAKVT 147

Query: 94  SKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           +KV+FDV+IGGE  GRIVMGLFG VVPKT ENFR LCTG+
Sbjct: 148 NKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGE 187

[Close]

BLAST of Spo03436.1 vs. TAIR (Arabidopsis)
Match: AT2G29960.1 (cyclophilin 5)

HSP 1 Score: 67.8 bits (164), Expect = 6.100e-12
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 1


		  
Query: 87  EVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           EVT KV+FDV+I G+  GR+V+GLFG  VPKTAENFR LCTG+
Sbjct: 29  EVTHKVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGE 71

[Close]

BLAST of Spo03436.1 vs. TAIR (Arabidopsis)
Match: AT4G34960.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 67.8 bits (164), Expect = 6.100e-12
Identity = 29/43 (67.44%), Postives = 38/43 (88.37%), Query Frame = 1


		  
Query: 87  EVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           E+T++VF DVDI G+++GRIV+GL+G VVPKT ENFR LCTG+
Sbjct: 44  EITNRVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGE 86

[Close]

BLAST of Spo03436.1 vs. TAIR (Arabidopsis)
Match: AT5G58710.1 (rotamase CYP 7)

HSP 1 Score: 67.4 bits (163), Expect = 8.000e-12
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 1


		  
Query: 87  EVTSKVFFDVDIGGEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           E+T KV+FDV+I G+  GRIVMGLFG  VPKT ENFR LCTG+
Sbjct: 32  EITHKVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGE 74

[Close]

BLAST of Spo03436.1 vs. TAIR (Arabidopsis)
Match: AT5G13120.1 (cyclophilin 20-2)

HSP 1 Score: 67.4 bits (163), Expect = 8.000e-12
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1


		  
Query: 22  PMMTSMTTVPQFQRLSASARYSECRLSSTNLSASAFGCKISKTSSIPHRSIRCMSTETDV 81
           P+ TS  T   F+  + S+  S    SST  SAS+     S T     R+ RC S +++ 
Sbjct: 23  PINTSAFTSTSFRLRTKSSFDSISFSSSTPFSASSLLLHTSYTK----RNHRCFSVQSNA 82

Query: 82  QDV---QAEVTSKVFFDVDIG---GEQVGRIVMGLFGGVVPKTAENFRVLCTGK 130
           + V   Q+++T KV+FD+ +G   G+  GRIV+GL+G  VP+T ENFR LCTG+
Sbjct: 83  EVVTEPQSKITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGE 132

The following BLAST results are available for this feature:

BLAST of Spo03436.1 vs. NCBI nr
BLAST of Spo03436.1 vs. UniProtKB/TrEMBL
BLAST of Spo03436.1 vs. ExPASy Swiss-Prot
BLAST of Spo03436.1 vs. TAIR (Arabidopsis)

BLAST of Spo03436.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902231058\|gb\|KNA22103.1\|	1.6e-59	100.	hypothetical protein SOVF_0369...	[more]
gi\|731323534\|ref\|XP_010672482.1\|	5.1e-37	70.8	PREDICTED: peptidyl-prolyl cis...	[more]
gi\|641868058\|gb\|KDO86742.1\|	4.1e-18	46.7	hypothetical protein CISIN_1g0...	[more]
gi\|567904308\|ref\|XP_006444642.1\|	4.1e-18	46.7	hypothetical protein CICLE_v10...	[more]
gi\|567904310\|ref\|XP_006444643.1\|	3.5e-17	46.7	hypothetical protein CICLE_v10...	[more]

BLAST of Spo03436.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RRM3_SPIOL	1.1e-59	100.	Peptidyl-prolyl cis-trans isom...	[more]
A0A0J8CUD8_BETVU	3.6e-37	70.8	Peptidyl-prolyl cis-trans isom...	[more]
A0A067HFI6_CITSI	2.9e-18	46.7	Peptidyl-prolyl cis-trans isom...	[more]
A0A067HFT8_CITSI	2.9e-18	46.7	Peptidyl-prolyl cis-trans isom...	[more]
V4TWG4_9ROSI	2.9e-18	46.7	Peptidyl-prolyl cis-trans isom...	[more]

BLAST of Spo03436.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
CYPB_VICFA	2.1e-14	58.8	Peptidyl-prolyl cis-trans isom...	[more]
CP20C_ARATH	1.4e-13	48.0	Peptidyl-prolyl cis-trans isom...	[more]
CP21A_ARATH	1.1e-10	67.4	Peptidyl-prolyl cis-trans isom...	[more]
CP19D_ARATH	1.1e-10	69.7	Peptidyl-prolyl cis-trans isom...	[more]
PNSL5_ARATH	1.4e-10	40.3	Photosynthetic NDH subunit of ...	[more]

BLAST of Spo03436.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G62030.2	7.7e-15	48.0	rotamase CYP 4	[more]
AT2G29960.1	6.1e-12	69.7	cyclophilin 5	[more]
AT4G34960.1	6.1e-12	67.4	Cyclophilin-like peptidyl-prol...	[more]
AT5G58710.1	8.0e-12	69.7	rotamase CYP 7	[more]
AT5G13120.1	8.0e-12	40.3	cyclophilin 20-2	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50072	CSA_PPIASE_2	coord: 93..129 score:
IPR024936	Cyclophilin-type peptidyl-prolyl cis-trans isomerase	PANTHER	PTHR11071	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 24..128 score: 1.9
None	No IPR available	PANTHER	PTHR11071:SF247	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE D	coord: 24..128 score: 1.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0072330	monocarboxylic acid biosynthetic process
biological_process	GO:0006790	sulfur compound metabolic process
biological_process	GO:0006950	response to stress
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0050789	regulation of biological process
biological_process	GO:1901362	organic cyclic compound biosynthetic process
biological_process	GO:0046483	heterocycle metabolic process
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0006732	coenzyme metabolic process
biological_process	GO:0034641	cellular nitrogen compound metabolic process
biological_process	GO:0044255	cellular lipid metabolic process
biological_process	GO:0008652	cellular amino acid biosynthetic process
biological_process	GO:0019438	aromatic compound biosynthetic process
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity