Spo03711.1 (mRNA) | SpinachBase

Overview


Name	Spo03711.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	50S ribosomal protein L21, related protein
Location	SpoScf_00131 : 485164 .. 491312 (+)
Sequence length	1479

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAAATTTCGACGATTAACAATATACTACCTAGGTATTTTATTCAAAGATATGTTTAGTTAAATTATTTTTCAGTATTCTAATTACGTCATTTTGGGTTCTTACGGGGGTGTTGATGGTGGCGTTAGGTAGCATTGACAATTTGATGGCGAATCGACATGGTAGTAACTTTGTAGTATAATTTTTATGATATTGATTTTTTAGGTAGCTTGTGTGGCGACGGTGGTGGAGTAACATACTAACATTAGTTAGACTGTCATGGTGTTTGTTTGATCGAGTTTGCAGTGTCGATTTTATTTTCAGTTAATATAATTCCATATACCCACCTCCCCCTTGAGTACGAGAACTCGATACATAGGGGTTTTGGAGGTGGATCCCCAAATTTTAAATCTAATATACATATATAAAGGAGGCATATTTGATGAAAGATTAGAGCGGCCACCTAGGATTACTAATGGTTTCGGCCAATGAAAAATAAGATTTCTAATTTCTTTTTGAATTAAAAAAAATCAAGTTCCACGTAGATATTTTAATTAATTAATTATTAATATACACAACTCCATCGAAAATCAAACACTCTAATAATTAATAAATAATCGATTGCCACGTAGATAATTAATTAAGTGCTACATAGATATTTTAATTAATAAATTAATTACTAATATATACAACTCCATCTAAAATCAAACACTCTAATAATTTAAAAATAAATCTAAAATAAAATTCATCCAAAATCAAACAATAATCTAAAATAAAATAAATAAATTTCAATTTAAAATCAAACATTAATCCAATATTAGAGCGCCACGTAGAAAAATCTAATGGCTTCGGCCAATGGAGGAATATTTGCTGAAATATTAGAGCGACACCTAGGATTACTAATGGTTTCGGCCAATTAATGAAAAATAATATTTCTAATTTCTTTTTGAATTTAAAAAATCAAGTGACACATAGATAATTAATTAGGTGACACGTAGATAATTAATTAGGTGCCACGTAGATATTTTTATTAATTAATTACTAATATATACAACTCCATCGAAAATCAAACACTATAATAATTAAAAAATAATCGATTTCCACGTAGATAATTAATTAGGTGCCACGTAGATATTTTAATTAATTAATTACTAATATATACAACTCCCTCTAAAATCAAACACTCTAATAATTAAAAAATAAATCTAAATAAAATCATCCAAAATCAAACAATAATCTAAAATAAAATAAATAAAATTCATTTTAAAATCAAACAATAATCTAAAATAAAATAAATAAAATTCAACTTAAAATCAAACCTTAATACAATAGTAGAGCGCCACATAGAAAAATCTAATGGTTTTCCGCCAATGAAAAATAAGATTTCAAAATTAATTTTGAATTAAAAAAGTCGAGTGCCACGTAAAGAAATGATTAACTTTCACGTAAATATTTTTTATTAATTATTTATTAATATTACGCATATACATTTTCATCAAAAAACAAACACTTTCATAATAAAAAAAAAATCTAAAATGAAATTCAATGCAAAATCAAAAACTAATCTAATCTAATCTAATATATAAAAGTAGTATATACATAGGATTTTTATTTAAACATAACAATTTAATAGAATCTGTGCATCGCACGGGCTAAAATCTAATTTTATAAAAATAGTTAACCAACCATCAAGTATGGGGTTGGATGATTTCCAACCCATACCTGATTCCAAAATATGCTAAACCAAATACACCCTTAATTATTTAATTTCCATTTGTCTACTTGGGCCGGGCCCAAATTTGTAGCACGGTTTCGAAGGCTATGCAAGTGTGAAATACAGAGTAACTGAGATCTTCTTCAACCTATCTTCTTCAACCTAATTTCAGTTTTCTGGCGGAAAAACTTTGATACAATCAGCAAGTTTGCTTGGGAAACGTGAATATTAGATTGAAATCTCGTTTCCCATTCGTTTCCGGGATGAATTCAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGGCGCGTTCCGAAACGCGTTTCCGGGGTTTCCCCGTTCCAGGACGTTTCGGAAACGGTAAGTCGTGATTTTTTGGCGTTTCCGTGCTTTGTAGGTAGTGAGTTGTACGAGTATGTTTTAATAATTCAATTTCTTCTTCTTGTTGTTTGTTAACCCTGGGTTTTTAGATGTTCATGAGTGCTTACATTCTTCGGCAGAATAGGCCAAGATAGGATTGTATGTGGGATCAATTTTTCTTACACTGAAATTTGTATCATATAAAAAGGTTTTCAATCGAAGCATCGGCTTTTTTTTTTCTGGAATTTCGTTTTAGGAGATTGATTTATAGCTGAGAAGCCAAACTGTCAAACATAGTGATTTGTCAACTATTACAGTTCTCAAGTATTATTTGCTACTCTGCTTTTGTGCTACAAAATTGGTGGCCGGACTCGGGACGAATCGGCATAAATTACAGAAAGTTAAAGAATAGATTATCAAGTATTCATGAGTTTGTTTTGATTTTTCAATATCTTGTTGTTATCTGTGGGAATGGGGATTAGTTCATGAGTTAAAGTGGATGGTTCACGAGTTGTTATTTGTTGTTGTTGACTTGTTATTGGTGGATTGTTGTTTTAATTATGAGTGAATGCATCAGTCGGTTTGATCATTCAATATCATATTTGTTTAGTTGCTCAATTGCGTTTGTAAAGGCAATTAATAATGTGAGGAGTAACTAAGTAAGCATTGTTTGATTGTTCTTTTGATTTTGTTTATCTTAGTGTATGTGTATTTGATTTGTTTTGACTAAGCAATTAATTAGATGGTACAATCACTCTGACTAAGCAAGTTAATTATATGTTACAATCACTCAATCAGTGGGCATTGTGAATCACTAATATGAATCTTGTTGTAATTGTGACTTTATTTTTAGAATGAAAAGGAAGAGCAATTGTAATGATTTTGTAGGTATTTGATTGTAATATGTACTTTTGGGACGATTTTTTTGACGTACTTTTATACATATATGTTGTTTGTTTTTTATATTAATTATGCGGTGCTTTATCGATGGTGACACAGCACCCTAAAGTTCCTGTATACGCCACTGCTTACTTCACACCAACAACAATGGCGTCCAGGCGGTGTTTCACCACTCTCACCCGCCTTTCGTTCAACCCCCTCTTCTCCAAGTCCAACTCGCTCCACTCCCTCAAATCTCTAACTTCTCCCCTCCGTTCTCTGCAATGCCTCCCCCACACTCTCTCTCCTCAATCCAACCCTCATTCATTCCTACCTCGCTACTTCTCTTCCCGTACTCAAAACCATAAATCCCCCAAAATCACCGAAAACGATGAGGATGAGGATGATGATGATGATGATGATGATGATGATGATGATGATGATAATGAGGAAGATTATACAAGCGGAGAAGAGGAGAGAGAAGTTTCAAATGAGCCGTCTAATCTAGCTGATAGATCGTATTTTGTAGAGGATAAACTTGAAGAAGCTGCTCATATTGGGTATAAGGTTATTGGGCCGCTTTTGCCTACTGATCGGGTTTTTAAACCCTATGAACTCGCTTTTGCAGTTGTTCAGGTTTGATTTCTTTTCTAATTTTGTAGTTTTTGTTTCGAATTCGGTGTTTTTTGGGTTTAGGGGTTTAATTGAGGTTTTTGATTTGTTTTGCGGTTTAGGTAGGATCGCATCAGTTTAAAGTGAGTAATGGGGATTGCATCTATGTGGAGAAGCTCAAGTACTGTGAGGTCAATGATAAGGTATTTCATTTTTCTGATTAAGGCTAAGTTCAGTGATTAATGATCAATATAATTTGTAATAGCAATGACTGATTTTGTTGCCTACACGAAATTGCTGGGAAGATGGTACTGTTTTGAATTATGGTAGTTTTACATTTTTGTCCGTATGCTGTTCTTTATCACTGGTAATTAGACTTGTTTAGTGCTACAGATGCTGTTCTTTATCACTGGTAATTAGACTTGTTTAGTGCTACTTGTACTTTGGTGTGAGAACCCCTTTCTGTACATTTTTTTGTTATGCGTCAACATTTTGCTATTAATAGAGCACATATCGTCCATGGTGAAGCAGTTAATGTGTAGTACATAAAAACTGTTCCTTTTTTTTATTGTTATTTTCAGTATCTAAGAGCTGAGAATGAGCAAAAGGAAAGTGGGAAAAACGGTTTATGTATCCGGGTTCTTAACAGAAGAGAAAAACTAGATTGACTAAGATGATTGAATTAATATAGAGTTGATCATAACCAATTTTCTCTCGAGAGTGCCCGCTTGATTACTTGTATGGAGGCATAGTTAGGGTGATGATACATCTATACTGCATGTATTGGCTGTAGAAGATATTTAAGGTCTATTTTGATGACAGTCTTGATCAGTTACGATAGTCCTTTGTTGCACATGAAAGAACAAAAGTACCTCTATTCAGAATGCCTATATACGGTGGTGAACAAAAATACCTCTGTGCAGAATGCCTTGATCACTATAAGCAATGAGGATCTTCCTGACTTCATTGTCCTATTTTGTTTCTAAAATCCTCGTTTGATGCATTTCTTGCAAACACTAATAACCGTAACCTTACTTCCTAAATCAGTGGAAACTAGCAAGTGTACACTTTTCAGCAAGGGCCCTCTTACATTGAGATGTAGAATTTTACAAGTGTCATTTGGTTTCTCTCTTTCTTTACATGCATGCATCGATGTTTTAGTGTTTTGTGACCCAAATTTTAATAATTTATTTAAGTTATCTCCATTTCATCAAGTTGTTCCTCGCAGTTACTTTGCCCATATATACCAATAATTCAGACTGGTTTATTCATCATTTTGGTGTTCTGCAGTTGATCTTAAGTAAGGTCTTGATGGCGGGTTCACCAACTCAAACAATGATCGGGAGACCTATATTGCCAGAGGTAGCAGTTCATGCTGTAGTGGAGGAGCATGTAAGAAACCTTCTGAAATTTTTATTTATTCATGTTTCTTAATGATTTCTGGGCATATACTGACCTTCAATATTTGAGCATCTGTATTCCGTTAGTCTTGACAAAAGATGATTTCAGCTTCACATGGTTATCAGTTATGAGTTAATGACACGATAAGTTACTTAGCTTGTAAGCTGTCTTCATATGATCTCATGTATTTGTAATATGATAGTTGATAGCGAGCTTTGAATACCTCTAGAAACAAGTGAACGCATGATTTCTGGATGGAGGGCAAAAAGTCTGTTTAAGAGGCCACTCATTAAAAAGAAATAAGCAGTCAACTTTATCAAAGCTTTAGTCTGGTGATTACTTGGATGTTTTGGAGTTAGAACTGTCTAAGGCACTTAATTTTTGGTAGATTTTTCTGGCATGAAAACTGAAGTTGGATGCATTGCAGGGATAGTAGTTTTAATTCTCCCACCTTGTCATTTTCAGGCTTTAGATGCCAAGGTGATCATCTTTAAAAAGAAGCGAAGAAAGAACTACCGGAGAACCAAAGGTCACAGACAGGTAATGGCAAATTGAGATTCATGCCTGGCTCTGTAAACTCACACTTATAGTTGGTTGCTAATGTATAAATGGACTTACAGGAGCTCACTAGGTTGAGAATAACTGACGTAGAAGGAATTGAGAAACCAGAAGCACCACCAGTTGGGAAGACGCTTAAAATATCTGCTAAGAAAGTAGAAAAAGTAGCAGTGGATGCATAGTTGAATTGCTGATCTGATATGCTGAATTGCTGATGATAGAGGCTCAACTCTTGCAAACTGACACTGGGATTTCATGTCATGTTTGTTGAATTTATGTTATAGGAAGTTTTGATTCTAACCATATGTTAGGTTTTGATGGTTAATCTTGTAGGTGTAAAATTTGTTCAATTCATAAACCATCGAGCAGACACGTGCAATTCTTCTCCCTTGATGAAAGGAGTTGGAGGTCTACTGGAATGAGTTCAATATCGTAGTTGTCTCCTTGATAAAGTTCTGGTTAACATTATGGAACATCTGTTTTGCCAACTTTACCTGTGGCCAGTTGTTCATAGATTTATGTAAGAAATCGCAGAAGGGGTATTTTTACCACTGTTTGCATATCTTTTTATTTGTGTTGTATTTGGTCGTATTTCAATAGTATTTCAATAATCAGTTTTTTTTTCCTCTCCTGAAAAT

mRNA sequence

ATGTCCAAAATTTCGACGATTAACAATATACTACCTAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGGCGCGTTCCGAAACGCGTTTCCGGGGTTTCCCCGTTCCAGGACGTTTCGGAAACGCACCCTAAAGTTCCTGTATACGCCACTGCTTACTTCACACCAACAACAATGGCGTCCAGGCGGTGTTTCACCACTCTCACCCGCCTTTCGTTCAACCCCCTCTTCTCCAAGTCCAACTCGCTCCACTCCCTCAAATCTCTAACTTCTCCCCTCCGTTCTCTGCAATGCCTCCCCCACACTCTCTCTCCTCAATCCAACCCTCATTCATTCCTACCTCGCTACTTCTCTTCCCGTACTCAAAACCATAAATCCCCCAAAATCACCGAAAACGATGAGGATGAGGATGATGATGATGATGATGATGATGATGATGATGATGATGATAATGAGGAAGATTATACAAGCGGAGAAGAGGAGAGAGAAGTTTCAAATGAGCCGTCTAATCTAGCTGATAGATCGTATTTTGTAGAGGATAAACTTGAAGAAGCTGCTCATATTGGGTATAAGGTTATTGGGCCGCTTTTGCCTACTGATCGGGTTTTTAAACCCTATGAACTCGCTTTTGCAGTTGTTCAGGTAGGATCGCATCAGTTTAAAGTGAGTAATGGGGATTGCATCTATGTGGAGAAGCTCAAGTACTGTGAGGTCAATGATAAGTTGATCTTAAGTAAGGTCTTGATGGCGGGTTCACCAACTCAAACAATGATCGGGAGACCTATATTGCCAGAGGTAGCAGTTCATGCTGTAGTGGAGGAGCATGCTTTAGATGCCAAGGTGATCATCTTTAAAAAGAAGCGAAGAAAGAACTACCGGAGAACCAAAGGTCACAGACAGGAGCTCACTAGGTTGAGAATAACTGACGTAGAAGGAATTGAGAAACCAGAAGCACCACCAGTTGGGAAGACGCTTAAAATATCTGCTAAGAAAGTAGAAAAAGTAGCAGTGGATGCATAGTTGAATTGCTGATCTGATATGCTGAATTGCTGATGATAGAGGCTCAACTCTTGCAAACTGACACTGGGATTTCATGTCATGTTTGTTGAATTTATGTTATAGGAAGTTTTGATTCTAACCATATGTTAGGTTTTGATGGTTAATCTTGTAGGTGTAAAATTTGTTCAATTCATAAACCATCGAGCAGACACGTGCAATTCTTCTCCCTTGATGAAAGGAGTTGGAGGTCTACTGGAATGAGTTCAATATCGTAGTTGTCTCCTTGATAAAGTTCTGGTTAACATTATGGAACATCTGTTTTGCCAACTTTACCTGTGGCCAGTTGTTCATAGATTTATGTAAGAAATCGCAGAAGGGGTATTTTTACCACTGTTTGCATATCTTTTTATTTGTGTTGTATTTGGTCGTATTTCAATAGTATTTCAATAATCAGTTTTTTTTTCCTCTCCTGAAAAT

Coding sequence (CDS)

ATGTCCAAAATTTCGACGATTAACAATATACTACCTAGTTTCAAACACGTCTCCATTTTTCTGAAACGGTTTCGGCGCGTTCCGAAACGCGTTTCCGGGGTTTCCCCGTTCCAGGACGTTTCGGAAACGCACCCTAAAGTTCCTGTATACGCCACTGCTTACTTCACACCAACAACAATGGCGTCCAGGCGGTGTTTCACCACTCTCACCCGCCTTTCGTTCAACCCCCTCTTCTCCAAGTCCAACTCGCTCCACTCCCTCAAATCTCTAACTTCTCCCCTCCGTTCTCTGCAATGCCTCCCCCACACTCTCTCTCCTCAATCCAACCCTCATTCATTCCTACCTCGCTACTTCTCTTCCCGTACTCAAAACCATAAATCCCCCAAAATCACCGAAAACGATGAGGATGAGGATGATGATGATGATGATGATGATGATGATGATGATGATGATAATGAGGAAGATTATACAAGCGGAGAAGAGGAGAGAGAAGTTTCAAATGAGCCGTCTAATCTAGCTGATAGATCGTATTTTGTAGAGGATAAACTTGAAGAAGCTGCTCATATTGGGTATAAGGTTATTGGGCCGCTTTTGCCTACTGATCGGGTTTTTAAACCCTATGAACTCGCTTTTGCAGTTGTTCAGGTAGGATCGCATCAGTTTAAAGTGAGTAATGGGGATTGCATCTATGTGGAGAAGCTCAAGTACTGTGAGGTCAATGATAAGTTGATCTTAAGTAAGGTCTTGATGGCGGGTTCACCAACTCAAACAATGATCGGGAGACCTATATTGCCAGAGGTAGCAGTTCATGCTGTAGTGGAGGAGCATGCTTTAGATGCCAAGGTGATCATCTTTAAAAAGAAGCGAAGAAAGAACTACCGGAGAACCAAAGGTCACAGACAGGAGCTCACTAGGTTGAGAATAACTGACGTAGAAGGAATTGAGAAACCAGAAGCACCACCAGTTGGGAAGACGCTTAAAATATCTGCTAAGAAAGTAGAAAAAGTAGCAGTGGATGCATAG

Protein sequence

MSKISTINNILPSFKHVSIFLKRFRRVPKRVSGVSPFQDVSETHPKVPVYATAYFTPTTMASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPLRSLQCLPHTLSPQSNPHSFLPRYFSSRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADRSYFVEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKYCEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVAVDA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03711	Spo03711	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03711.1	Spo03711.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03711.1.exon.1	Spo03711.1.exon.1	exon
Spo03711.1.exon.2	Spo03711.1.exon.2	exon
Spo03711.1.exon.3	Spo03711.1.exon.3	exon
Spo03711.1.exon.4	Spo03711.1.exon.4	exon
Spo03711.1.exon.5	Spo03711.1.exon.5	exon
Spo03711.1.exon.6	Spo03711.1.exon.6	exon
Spo03711.1.exon.7	Spo03711.1.exon.7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03711.1.CDS.1	Spo03711.1.CDS.1	CDS
Spo03711.1.CDS.2	Spo03711.1.CDS.2	CDS
Spo03711.1.CDS.3	Spo03711.1.CDS.3	CDS
Spo03711.1.CDS.4	Spo03711.1.CDS.4	CDS
Spo03711.1.CDS.5	Spo03711.1.CDS.5	CDS
Spo03711.1.CDS.6	Spo03711.1.CDS.6	CDS
Spo03711.1.CDS.7	Spo03711.1.CDS.7	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03711.1.utr3p.1	Spo03711.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo03711.1 vs. NCBI nr
Match: gi|902155554|gb|KNA05914.1| (hypothetical protein SOVF_185930 [Spinacia oleracea])

HSP 1 Score: 486.5 bits (1251), Expect = 3.800e-134
Identity = 263/281 (93.59%), Postives = 271/281 (96.44%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPLRSLQCLPHTLSPQSNPHSFLPRYFS 119
           MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSP RSLQCLP TLSP+S+PHSFLPRYFS
Sbjct: 1   MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPFRSLQCLPDTLSPESHPHSFLPRYFS 60

Query: 120 SRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADRSYFV 179
           SRTQN KSPKI END    DD++DDDDDDDDD+EEDYTSGEEEREVSNEPSNLADRSYFV
Sbjct: 61  SRTQNPKSPKIIEND----DDNEDDDDDDDDDDEEDYTSGEEEREVSNEPSNLADRSYFV 120

Query: 180 EDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKYCEV 239
           EDK+EEAAHIGYKVIGPLLPTDRVFKPYE AFAVVQVGSHQFKVSNGDCIYVEKLKYCEV
Sbjct: 121 EDKIEEAAHIGYKVIGPLLPTDRVFKPYEPAFAVVQVGSHQFKVSNGDCIYVEKLKYCEV 180

Query: 240 NDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 299
           NDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH
Sbjct: 181 NDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 240

Query: 300 RQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVAVDA 341
           RQELTRLRITDVEGIEKPEAPPVGKT K+SAKKVEKVA+DA
Sbjct: 241 RQELTRLRITDVEGIEKPEAPPVGKTPKLSAKKVEKVAMDA 277

[Close]

BLAST of Spo03711.1 vs. NCBI nr
Match: gi|731349526|ref|XP_010686037.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 377.9 bits (969), Expect = 1.900e-101
Identity = 211/281 (75.09%), Postives = 241/281 (85.77%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPLRSLQCLPHTLSPQSNPHSFLPRYFS 119
           MA RRCFTTLTR + + L    +SLH LKSL S L S+Q LPH LSPQ NP S+L R FS
Sbjct: 1   MAYRRCFTTLTRQTSSLLSQNPHSLHPLKSLISHLPSIQRLPHILSPQLNPQSYLSRNFS 60

Query: 120 SRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADRSYFV 179
           SRT+N K+P+I ++++D+D D D +DD+D+DD EEDY+S ++E EV  EPSNLA+RSYFV
Sbjct: 61  SRTKNPKNPRIIDDEDDDDHDVDGEDDEDEDDEEEDYSS-QDEGEVLIEPSNLAERSYFV 120

Query: 180 EDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKYCEV 239
           EDK++EAAHIGYKV+GPL P DRVFKPYE A+A+VQVGSHQFKVSNGDCIYVEKLKYCEV
Sbjct: 121 EDKIQEAAHIGYKVVGPLEPGDRVFKPYEPAYAIVQVGSHQFKVSNGDCIYVEKLKYCEV 180

Query: 240 NDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 299
           NDKLIL+K LMAGSPTQTMIGRPILP+V VHAVVEEHALDAKVIIFKKKRRKNYRRTKGH
Sbjct: 181 NDKLILTKALMAGSPTQTMIGRPILPDVTVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 240

Query: 300 RQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVAVDA 341
           RQELTRLRIT++EGIEKPE P  GKT K  AKKVEK+AV A
Sbjct: 241 RQELTRLRITEIEGIEKPETPLPGKTPKTPAKKVEKIAVAA 280

[Close]

BLAST of Spo03711.1 vs. NCBI nr
Match: gi|658056796|ref|XP_008364157.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Malus domestica])

HSP 1 Score: 256.1 bits (653), Expect = 8.400e-65
Identity = 169/290 (58.28%), Postives = 205/290 (70.69%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKS---LTSPLRSLQCLPHTLSPQSNPHSFLPR 119
           MA+ R    LTR + + LFSKS S HSL +   +  PL++L      +S   +P   L R
Sbjct: 1   MATPRRLQALTRHA-SALFSKSPSFHSLPAPLPIXQPLKTLTSNFSLISSSPDPTRSLTR 60

Query: 120 YFSSRTQNHKSPKITE-NDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADR 179
           +FSS+      P+I + N+++E  ++++DDDDDDDD++E+    E+E       S    R
Sbjct: 61  HFSSK------PRIGDVNEDNEHSEEEEDDDDDDDDDDEEVGDSEDESAYRCSGSK---R 120

Query: 180 SYFVEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLK 239
            Y  E+K  EAA IGY+VIGPL  +DRVFKPYE  FAVVQVGSHQFKVSNGDCI+ EKLK
Sbjct: 121 EYTPEEKXAEAAGIGYQVIGPLQRSDRVFKPYEPVFAVVQVGSHQFKVSNGDCIFTEKLK 180

Query: 240 YCEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRR 299
           +CEVNDKL+L+KVLM GS +QT+IGRPILP+ AVHAVVEEHALDAKVIIFKKKRRKNYRR
Sbjct: 181 FCEVNDKLVLNKVLMLGSSSQTIIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRR 240

Query: 300 TKGHRQELTRLRITDVEGIEKP-----EAPPVGKTLKISAKKVEKVAVDA 341
           TKGHRQELT+LRI DV+GIEKP     E PP  K  K   KK EKV V A
Sbjct: 241 TKGHRQELTKLRIVDVQGIEKPEPVVTEKPP--KAPKAPGKKTEKVVVAA 278

[Close]

BLAST of Spo03711.1 vs. NCBI nr
Match: gi|657959635|ref|XP_008371367.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Malus domestica])

HSP 1 Score: 255.8 bits (652), Expect = 1.100e-64
Identity = 169/290 (58.28%), Postives = 205/290 (70.69%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKS---LTSPLRSLQCLPHTLSPQSNPHSFLPR 119
           MA+ R    LTR + + LFSKS S HSL +   +  PL++L      +S   +P   L R
Sbjct: 1   MATXRRLQALTRHA-SALFSKSPSFHSLPAPLPIXQPLKTLTSNFSLISSSPDPTRSLTR 60

Query: 120 YFSSRTQNHKSPKITE-NDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADR 179
           +FSS+      P+I + N+++E  ++++DDDDDDDD++E+    E+E       S    R
Sbjct: 61  HFSSK------PRIGDVNEDNEHSEEEEDDDDDDDDDDEEVGDSEDESAYRCSGSK---R 120

Query: 180 SYFVEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLK 239
            Y  E+K  EAA IGY+VIGPL  +DRVFKPYE  FAVVQVGSHQFKVSNGDCI+ EKLK
Sbjct: 121 EYTPEEKEAEAAGIGYQVIGPLQRSDRVFKPYEPVFAVVQVGSHQFKVSNGDCIFTEKLK 180

Query: 240 YCEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRR 299
           +CEVNDKL+L+KVLM GS +QT+IGRPILP+ AVHAVVEEHALDAKVIIFKKKRRKNYRR
Sbjct: 181 FCEVNDKLVLNKVLMLGSSSQTIIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYRR 240

Query: 300 TKGHRQELTRLRITDVEGIEKP-----EAPPVGKTLKISAKKVEKVAVDA 341
           TKGHRQELT+LRI DV+GIEKP     E PP  K  K   KK EKV V A
Sbjct: 241 TKGHRQELTKLRIVDVQGIEKPEPVVTEKPP--KAPKAPGKKTEKVVVAA 278

[Close]

BLAST of Spo03711.1 vs. NCBI nr
Match: gi|694323722|ref|XP_009352917.1| (PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Pyrus x bretschneideri])

HSP 1 Score: 255.4 bits (651), Expect = 1.400e-64
Identity = 165/286 (57.69%), Postives = 199/286 (69.58%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKS-----LTSPLRSLQCLPHTLSPQSNPHSFL 119
           MA+RR    LTR + + LFSK+ S HSL +     +  PL++L      +    +P   L
Sbjct: 1   MATRRPLQALTRHA-SALFSKNPSFHSLPTPPPLPIYQPLKTLTSNFSLIFSNPDPTRSL 60

Query: 120 PRYFSSRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLAD 179
            R+FSS+      P+I + +ED +  DDD+D+D+DDD  E     E+E       S    
Sbjct: 61  TRHFSSK------PRIGDVNEDNEHSDDDEDEDEDDDESEGVGDSEDESAYRCSGSK--- 120

Query: 180 RSYFVEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKL 239
           R Y  E+K  EAA IGY+VIGPL  +DRVFKPYE  FAVVQVGSHQFKVSNGDCI+ E+L
Sbjct: 121 REYTPEEKEVEAAAIGYQVIGPLQRSDRVFKPYEPVFAVVQVGSHQFKVSNGDCIFTERL 180

Query: 240 KYCEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYR 299
           K+CEVNDKL+L+KVLM GS +QT+IGRPILP+ AVHAVVEEHALDAKVIIFKKKRRKNYR
Sbjct: 181 KFCEVNDKLVLNKVLMLGSSSQTIIGRPILPDAAVHAVVEEHALDAKVIIFKKKRRKNYR 240

Query: 300 RTKGHRQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVAVDA 341
           RTKGHRQELT+LRI DV+GIEKPE     K  +   KK EKVAV A
Sbjct: 241 RTKGHRQELTKLRIVDVQGIEKPEPVVTEKPSRAPGKKTEKVAVAA 276

[Close]

BLAST of Spo03711.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QF61_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_185930 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.700e-134
Identity = 263/281 (93.59%), Postives = 271/281 (96.44%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPLRSLQCLPHTLSPQSNPHSFLPRYFS 119
           MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSP RSLQCLP TLSP+S+PHSFLPRYFS
Sbjct: 1   MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPFRSLQCLPDTLSPESHPHSFLPRYFS 60

Query: 120 SRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADRSYFV 179
           SRTQN KSPKI END    DD++DDDDDDDDD+EEDYTSGEEEREVSNEPSNLADRSYFV
Sbjct: 61  SRTQNPKSPKIIEND----DDNEDDDDDDDDDDEEDYTSGEEEREVSNEPSNLADRSYFV 120

Query: 180 EDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKYCEV 239
           EDK+EEAAHIGYKVIGPLLPTDRVFKPYE AFAVVQVGSHQFKVSNGDCIYVEKLKYCEV
Sbjct: 121 EDKIEEAAHIGYKVIGPLLPTDRVFKPYEPAFAVVQVGSHQFKVSNGDCIYVEKLKYCEV 180

Query: 240 NDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 299
           NDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH
Sbjct: 181 NDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 240

Query: 300 RQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVAVDA 341
           RQELTRLRITDVEGIEKPEAPPVGKT K+SAKKVEKVA+DA
Sbjct: 241 RQELTRLRITDVEGIEKPEAPPVGKTPKLSAKKVEKVAMDA 277

[Close]

BLAST of Spo03711.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZR4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g176280 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.300e-101
Identity = 211/281 (75.09%), Postives = 241/281 (85.77%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPLRSLQCLPHTLSPQSNPHSFLPRYFS 119
           MA RRCFTTLTR + + L    +SLH LKSL S L S+Q LPH LSPQ NP S+L R FS
Sbjct: 1   MAYRRCFTTLTRQTSSLLSQNPHSLHPLKSLISHLPSIQRLPHILSPQLNPQSYLSRNFS 60

Query: 120 SRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADRSYFV 179
           SRT+N K+P+I ++++D+D D D +DD+D+DD EEDY+S ++E EV  EPSNLA+RSYFV
Sbjct: 61  SRTKNPKNPRIIDDEDDDDHDVDGEDDEDEDDEEEDYSS-QDEGEVLIEPSNLAERSYFV 120

Query: 180 EDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKYCEV 239
           EDK++EAAHIGYKV+GPL P DRVFKPYE A+A+VQVGSHQFKVSNGDCIYVEKLKYCEV
Sbjct: 121 EDKIQEAAHIGYKVVGPLEPGDRVFKPYEPAYAIVQVGSHQFKVSNGDCIYVEKLKYCEV 180

Query: 240 NDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 299
           NDKLIL+K LMAGSPTQTMIGRPILP+V VHAVVEEHALDAKVIIFKKKRRKNYRRTKGH
Sbjct: 181 NDKLILTKALMAGSPTQTMIGRPILPDVTVHAVVEEHALDAKVIIFKKKRRKNYRRTKGH 240

Query: 300 RQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVAVDA 341
           RQELTRLRIT++EGIEKPE P  GKT K  AKKVEK+AV A
Sbjct: 241 RQELTRLRITEIEGIEKPETPLPGKTPKTPAKKVEKIAVAA 280

[Close]

BLAST of Spo03711.1 vs. UniProtKB/TrEMBL
Match: K4B945_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 4.200e-63
Identity = 164/284 (57.75%), Postives = 202/284 (71.13%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTR-LSFNPLFSKSNSLHSLKSLTSPL-RSLQCLPHTLSPQ----SNPHSF 119
           MA+RRC  TLTR LS+  L S + SL S ++LT PL  S+  L  T SP+    +   S 
Sbjct: 1   MANRRCLQTLTRHLSY--LLSPNPSLCSPQTLTPPLLNSINTL--TSSPKCPQVTTQLSS 60

Query: 120 LPRYFSSRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLA 179
             R+FSS       P  ++ +E+++ +D+ D DDDDDD+ E + S  E   V        
Sbjct: 61  FHRHFSSNR-----PSNSDEEEEDESEDETDYDDDDDDDVEGFKSNSEPGRV-------- 120

Query: 180 DRSYFVEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEK 239
              Y  E+K  EAA IGYKVIGPL  +DRVFKPYE  +AV+Q+GSHQFKVSNGD I+VEK
Sbjct: 121 ---YTPEEKEYEAAEIGYKVIGPLQKSDRVFKPYEPVYAVIQIGSHQFKVSNGDSIFVEK 180

Query: 240 LKYCEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNY 299
           LK+CEVNDKLIL+KVL+ GS TQT+IGRP+LP+ AVHAVVEEHALDAKV+IFKKKRRKNY
Sbjct: 181 LKFCEVNDKLILNKVLLLGSKTQTIIGRPVLPDAAVHAVVEEHALDAKVLIFKKKRRKNY 240

Query: 300 RRTKGHRQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVA 338
           RRT+GHRQELT+LRITD++G+EKPE  P+ KT K  AKKV   A
Sbjct: 241 RRTRGHRQELTKLRITDIQGVEKPEVVPILKTEKKDAKKVAVAA 264

[Close]

BLAST of Spo03711.1 vs. UniProtKB/TrEMBL
Match: M1CWR8_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400029725 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 7.100e-63
Identity = 163/287 (56.79%), Postives = 198/287 (68.99%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTR-----LSFNPLFSKSNSLHSLKSLTSPLRSLQCLPHTLSPQ----SNP 119
           MA+RRC  TLTR     LS NP     NS+       + L S+  L  T SP+    S  
Sbjct: 1   MANRRCLQTLTRHLSYLLSPNPSLCSLNSISPQTLTPALLNSINTL--TSSPKCPQVSTK 60

Query: 120 HSFLPRYFSSRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPS 179
            S   R+FSS   +        N +DE++D+ +D+ D DDD ++D     E  E ++EP 
Sbjct: 61  ISSFHRHFSSNRPS--------NSDDEEEDESEDETDYDDDGDDDV----EGLESNSEPG 120

Query: 180 NLADRSYFVEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIY 239
               R Y  E+K  EAA IGYKVIGPL  +DRVFKPYE  +AV+Q+GSHQFKVSNGD I+
Sbjct: 121 ----REYTPEEKEHEAAEIGYKVIGPLQKSDRVFKPYEPVYAVIQIGSHQFKVSNGDSIF 180

Query: 240 VEKLKYCEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRR 299
           VEKLK+CEVNDKLIL+KVL+ GS TQT+IGRPILP+ AVHAVVEEHALDAKV+IFKKKRR
Sbjct: 181 VEKLKFCEVNDKLILNKVLLLGSKTQTIIGRPILPDAAVHAVVEEHALDAKVLIFKKKRR 240

Query: 300 KNYRRTKGHRQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVA 338
           KNYRRT+GHRQELT+LRITD++G+EKPE  P+ KT K  AKKV   A
Sbjct: 241 KNYRRTRGHRQELTKLRITDIQGVEKPEVAPILKTEKKDAKKVAVAA 269

[Close]

BLAST of Spo03711.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HU23_SOLCH (Putative 50S ribosomal protein L21, mitochondrial-like OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.700e-62
Identity = 159/279 (56.99%), Postives = 197/279 (70.61%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTR-LSFNPLFSKSNSLHSLKSLTSPLRSLQCLPHTLSPQSNPHSFLPRYF 119
           MA+RRC  TLTR LS+  L S + SL SL S++  + +   L    +  S+P        
Sbjct: 1   MANRRCLQTLTRHLSY--LLSPNPSLCSLNSISPQILTPALLNSINTLTSSPKCPQVSTK 60

Query: 120 SSRTQNHKSPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADRSYF 179
            S    H S     N ++E++D+ +D+ D DDD ++D     E  E ++EP     R Y 
Sbjct: 61  ISSFHRHFSSNRPSNSDEEEEDESEDETDYDDDGDDDV----EGLESNSEPG----REYT 120

Query: 180 VEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKYCE 239
            E+K  EAA IGYKVIGPL  +DRVFKPYE  +AV+Q+GSHQFKVSNGD I+VEKLK+CE
Sbjct: 121 PEEKEHEAAEIGYKVIGPLQKSDRVFKPYEPVYAVIQIGSHQFKVSNGDSIFVEKLKFCE 180

Query: 240 VNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKG 299
           VNDKLIL+KVL+ GS TQT+IGRPILP+ AVHAVVEEHALDAKV+IFKKKRRKNYRRT+G
Sbjct: 181 VNDKLILNKVLLLGSKTQTIIGRPILPDAAVHAVVEEHALDAKVLIFKKKRRKNYRRTRG 240

Query: 300 HRQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVA 338
           HRQELT+LRITD++G+EKPE  P+ KT K  AKKV   A
Sbjct: 241 HRQELTKLRITDIQGVEKPEVAPILKTEKKDAKKVAVAA 269

[Close]

BLAST of Spo03711.1 vs. ExPASy Swiss-Prot
Match: RM21_ARATH (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana GN=RPL21M PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.100e-54
Identity = 145/284 (51.06%), Postives = 188/284 (66.20%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPLRSLQCLPH-TLSPQSNPHSFLPRYF 119
           MAS RCF  L+R +   +FS  N   S+ S      S   + H T+ P  +    LP Y 
Sbjct: 1   MASLRCFRELSRRA-TTVFS-INQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPWYS 60

Query: 120 S-SRTQNHK-SPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADRS 179
              R+Q+   S    + DEDE+  + +DDD+++ ++ ED    E ERE            
Sbjct: 61  HWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDSADMEVERE------------ 120

Query: 180 YFVEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKY 239
           Y   +K+EEA  IGYKV+GPL P++R+FKPYE  FA+VQ+GSHQFKVSNGD I+ EKLK+
Sbjct: 121 YSPAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKF 180

Query: 240 CEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRT 299
           C++NDKL L+KVL+ GS +QT+IGRPILP+  VHAVVEEHALD KV+IFKKKRRKNYRRT
Sbjct: 181 CDINDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRT 240

Query: 300 KGHRQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVAVDA 341
           +GHRQELT+LRITD++GIEKPE   V K  K +  +  K  + A
Sbjct: 241 RGHRQELTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA 270

[Close]

BLAST of Spo03711.1 vs. ExPASy Swiss-Prot
Match: RK21_SPIOL (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.000e-25
Identity = 68/148 (45.95%), Postives = 90/148 (60.81%), Query Frame = 1


		  
Query: 193 VIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKYCEVNDKLILSKVLMAG 252
           +I   LP      P E  FAVV +GS Q+ V  G  IY ++LK   VNDK++L+KVL+ G
Sbjct: 106 IINQFLPKKGPPPPREEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVG 165

Query: 253 SPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTRLRITDVE 312
           +   T IG PI+   AVHAVVEE  LD KVI+FK K++KNYRR  GHRQ +TR++IT + 
Sbjct: 166 TKASTYIGTPIVTNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGIT 225

Query: 313 GIEKPEAPPVGKTLKISAKKVEKVAVDA 341
           G E   A     TL+   +  E+   +A
Sbjct: 226 GYEDYPA----STLEAEVEAKEEAEAEA 249

[Close]

BLAST of Spo03711.1 vs. ExPASy Swiss-Prot
Match: RK21_ARATH (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 8.800e-22
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 1


		  
Query: 208 ELAFAVVQVGSHQFKVSNGDCIYVEKLKYCEVNDKLILSKVLMAGSPTQTMIGRPILPEV 267
           E  FAV+ VG  Q+ V  G  +Y ++LK   V+D+++L+KVL+ G+ T T IG+P++   
Sbjct: 98  EEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNA 157

Query: 268 AVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTRLRITDVEGIEKPEAPP 322
            VHAVVE   L+ KV++FK K +K YRR  GHRQ  TR+RIT + G E+  A P
Sbjct: 158 TVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEEYPASP 211

[Close]

BLAST of Spo03711.1 vs. ExPASy Swiss-Prot
Match: RL21_RHOCS (50S ribosomal protein L21 OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=rplU PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.500e-17
Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 1


		  
Query: 211 FAVVQVGSHQFKVSNGDCIYVEKLKYCEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVH 270
           FAV++ G  Q+KV+NGD I VEKL   +    + L  VLM     +T IG P++   AV 
Sbjct: 2   FAVIRTGGKQYKVANGDVIKVEKL-VADAGATVTLDDVLMVSDAGKTTIGTPVVQGAAVT 61

Query: 271 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTRLRITDVE 313
           A V   +   K+IIFKKKRR+NYRR  GHRQ+LT LRIT ++
Sbjct: 62  AEVVAQSRGPKIIIFKKKRRQNYRRKNGHRQDLTVLRITGIQ 102

[Close]

BLAST of Spo03711.1 vs. ExPASy Swiss-Prot
Match: RL21_PELCD (50S ribosomal protein L21 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rplU PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.200e-16
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 1


		  
Query: 211 FAVVQVGSHQFKVSNGDCIYVEKLKYCEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVH 270
           +AV++ G  Q+KVS GD + +EK++   V D + L +VLM G   +  IG P+LP   V 
Sbjct: 2   YAVIKTGGKQYKVSEGDLVKIEKIEGA-VGDTIELDEVLMVGGE-EVKIGTPLLPGAKVT 61

Query: 271 AVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTRLRITDVE 313
           A + +   D KV++F  KRRK YR+T GHRQ +TRL+IT +E
Sbjct: 62  ARIVQQGKDKKVLVFHSKRRKGYRKTYGHRQPITRLQITGIE 101

[Close]

BLAST of Spo03711.1 vs. TAIR (Arabidopsis)
Match: AT4G30930.1 (Ribosomal protein L21)

HSP 1 Score: 213.0 bits (541), Expect = 2.900e-55
Identity = 145/284 (51.06%), Postives = 188/284 (66.20%), Query Frame = 1


		  
Query: 60  MASRRCFTTLTRLSFNPLFSKSNSLHSLKSLTSPLRSLQCLPH-TLSPQSNPHSFLPRYF 119
           MAS RCF  L+R +   +FS  N   S+ S      S   + H T+ P  +    LP Y 
Sbjct: 1   MASLRCFRELSRRA-TTVFS-INQTRSISSFHGIEFSGTSISHGTVIPNRSLTRNLPWYS 60

Query: 120 S-SRTQNHK-SPKITENDEDEDDDDDDDDDDDDDDNEEDYTSGEEEREVSNEPSNLADRS 179
              R+Q+   S    + DEDE+  + +DDD+++ ++ ED    E ERE            
Sbjct: 61  HWYRSQDRCFSSNTKDTDEDEESSEGEDDDEEEGEDFEDSADMEVERE------------ 120

Query: 180 YFVEDKLEEAAHIGYKVIGPLLPTDRVFKPYELAFAVVQVGSHQFKVSNGDCIYVEKLKY 239
           Y   +K+EEA  IGYKV+GPL P++R+FKPYE  FA+VQ+GSHQFKVSNGD I+ EKLK+
Sbjct: 121 YSPAEKVEEAEEIGYKVMGPLKPSERLFKPYEPVFAIVQIGSHQFKVSNGDSIFTEKLKF 180

Query: 240 CEVNDKLILSKVLMAGSPTQTMIGRPILPEVAVHAVVEEHALDAKVIIFKKKRRKNYRRT 299
           C++NDKL L+KVL+ GS +QT+IGRPILP+  VHAVVEEHALD KV+IFKKKRRKNYRRT
Sbjct: 181 CDINDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRT 240

Query: 300 KGHRQELTRLRITDVEGIEKPEAPPVGKTLKISAKKVEKVAVDA 341
           +GHRQELT+LRITD++GIEKPE   V K  K +  +  K  + A
Sbjct: 241 RGHRQELTKLRITDIQGIEKPEPKIVHKPSKEAVTEQTKAELVA 270

[Close]

BLAST of Spo03711.1 vs. TAIR (Arabidopsis)
Match: AT1G35680.1 (Ribosomal protein L21)

HSP 1 Score: 105.9 bits (263), Expect = 4.900e-23
Identity = 53/114 (46.49%), Postives = 75/114 (65.79%), Query Frame = 1


		  
Query: 208 ELAFAVVQVGSHQFKVSNGDCIYVEKLKYCEVNDKLILSKVLMAGSPTQTMIGRPILPEV 267
           E  FAV+ VG  Q+ V  G  +Y ++LK   V+D+++L+KVL+ G+ T T IG+P++   
Sbjct: 98  EEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNA 157

Query: 268 AVHAVVEEHALDAKVIIFKKKRRKNYRRTKGHRQELTRLRITDVEGIEKPEAPP 322
            VHAVVE   L+ KV++FK K +K YRR  GHRQ  TR+RIT + G E+  A P
Sbjct: 158 TVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEEYPASP 211

The following BLAST results are available for this feature:

BLAST of Spo03711.1 vs. NCBI nr
BLAST of Spo03711.1 vs. UniProtKB/TrEMBL
BLAST of Spo03711.1 vs. ExPASy Swiss-Prot
BLAST of Spo03711.1 vs. TAIR (Arabidopsis)

BLAST of Spo03711.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902155554\|gb\|KNA05914.1\|	3.8e-134	93.5	hypothetical protein SOVF_1859...	[more]
gi\|731349526\|ref\|XP_010686037.1\|	1.9e-101	75.0	PREDICTED: 50S ribosomal prote...	[more]
gi\|658056796\|ref\|XP_008364157.1\|	8.4e-65	58.2	PREDICTED: 50S ribosomal prote...	[more]
gi\|657959635\|ref\|XP_008371367.1\|	1.1e-64	58.2	PREDICTED: 50S ribosomal prote...	[more]
gi\|694323722\|ref\|XP_009352917.1\|	1.4e-64	57.6	PREDICTED: 50S ribosomal prote...	[more]

BLAST of Spo03711.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QF61_SPIOL	2.7e-134	93.5	Uncharacterized protein OS=Spi...	[more]
A0A0J8BZR4_BETVU	1.3e-101	75.0	Uncharacterized protein OS=Bet...	[more]
K4B945_SOLLC	4.2e-63	57.7	Uncharacterized protein OS=Sol...	[more]
M1CWR8_SOLTU	7.1e-63	56.7	Uncharacterized protein OS=Sol...	[more]
A0A0V0HU23_SOLCH	2.7e-62	56.9	Putative 50S ribosomal protein...	[more]

BLAST of Spo03711.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RM21_ARATH	5.1e-54	51.0	50S ribosomal protein L21, mit...	[more]
RK21_SPIOL	1.0e-25	45.9	50S ribosomal protein L21, chl...	[more]
RK21_ARATH	8.8e-22	46.4	50S ribosomal protein L21, chl...	[more]
RL21_RHOCS	8.5e-17	49.0	50S ribosomal protein L21 OS=R...	[more]
RL21_PELCD	7.2e-16	45.1	50S ribosomal protein L21 OS=P...	[more]

BLAST of Spo03711.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G30930.1	2.9e-55	51.0	Ribosomal protein L21	[more]
AT1G35680.1	4.9e-23	46.4	Ribosomal protein L21	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001787	Ribosomal protein L21	HAMAP	MF_01363	Ribosomal_L21	coord: 210..313 score: 21
IPR001787	Ribosomal protein L21	TIGRFAMs	TIGR00061	TIGR00061	coord: 211..311 score: 2.2
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 110..157 score: 2.
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 86..164 score: 2.1
IPR018258	Ribosomal protein L21, conserved site	PROSITE	PS01169	RIBOSOMAL_L21	coord: 282..304 scor
None	No IPR available	PANTHER	PTHR21349	50S RIBOSOMAL PROTEIN L21	coord: 78..335 score: 8.7
None	No IPR available	PANTHER	PTHR21349:SF0	39S RIBOSOMAL PROTEIN L21, MITOCHONDRIAL	coord: 78..335 score: 8.7

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0016572	histone phosphorylation
biological_process	GO:0001510	RNA methylation
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0009555	pollen development
biological_process	GO:0000741	karyogamy
biological_process	GO:0051567	histone H3-K9 methylation
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0009567	double fertilization forming a zygote and endosperm
biological_process	GO:0006342	chromatin silencing
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005488	binding
molecular_function	GO:0019843	rRNA binding