Spo03772.1 (mRNA) | SpinachBase

Overview


Name	Spo03772.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Homeobox/lipid-binding domain protein
Location	SpoScf_05687 : 3440 .. 5933 (-)
Sequence length	1052

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTTTGTAACACTGTTCTTTTTACACTTTGATGCTATGAGTAGCCCAGCACCTTGCAGCAGCACCTGGTAAGTTTCTTTGTTTCTTATTCATTAACTTTTGTTTCGTTACGTCGAGTATGATCATTGAACATAACATTTGTTTGTTTTCCAAGGTCAATTAGTGAAGATTCACCAAAGAGATATGTACAATATGCAAGCGAGAACTGTATACAAGAGCTGCTGTCAGCGTCAGACTCGAGTAGGAATGGGAATGGAAATGACGGGTGGAAGATTGTTTCGTTAGATAGTGGTATGGAAATATCAAAGCGGCGTTCAGGATCATTCCACATCTTTCGTAGTCGTTGGCTCCTCAAATCAGTCTCTCCTCAGCAGTTCATTTCTGTTGCCAATGCTATTGATGCTGCAAAGGTCTGGTCTTGTCTTTCTGTTTTGTCATATGAATATAGTTGTTGAACTAACTCATTGACCTTCAGAACTTACCCCTATTGATTAAAATTCATACTTTTTCCGTCCTTAATTTATTGTTACATGTACTGTATTAAGATACAGTTTCTTATTCCATAGTATTTGGTTTGTATATATATATCATCAATGGGATCCTGACTTGGTGGAGGCAAGATACATAAAGGATCTGGAGGAAAATCTGAGCATAATACGTCTAAGATTCGGTGACGCATCAAGGCCGTTGTTTAAGAACAGAGAATTTATTGTATACGAAAGACGTGAGACGATGGATGACGGCACCCTTGTGGTTGCAGTAGCTTCACTCCCAAAAGAGATAGCTGCTGGGTTATACCCTAAGCAAAACAAGGCTATCAGGGGTTTATTGTTACAATCTGGCTGGGTTGTGGAGAAGCTTGAAGATCATTCCTGCATGGTCACCTATGTTGTTCAGGTTTTAACTTTTTTCATTTTTTTTTATTTAACTTTCTTCTTCTTACCGTAACACCACATGACAATATTAATCCCGTTACAAAACTTTAATCCAATCACACCAAAAAAAAATTATAAATAATAAAAAATTATAGAAGATACTTTTTTATTTCTTACCATCTAGAAAGTAATATCACGTCAACAATGTTACTCCCTCCGTATTTATTTAAGGGATACACTTGCCTTTTCCGACCGTATTTATTTAAGAGATACACTTGCCATTTTTAGTAACTTATCAACCCCACCATCTAATTAAATAATATATCTACATCCCAACCTCACCCCCACTCCCTAAAATAACATGGTCCCCACTTGTTTTTCTTATTAAAATATCTACTAAAACCCACTTGTTTTATTACTTTGTTTCATTCAATTCTTTTTCTTAATACGCGTGCCCGACCAAGTGTATCTCTTAAATAAATACGGAGGGAGTATTTCAACATCATTAAATTTTGTTTCTTTTTCAAAATTACATGAATTTACAGATCTTACAACCTTTAAAAGTGAGGAGTTGATTATCACTATTCATCCAATAGTTAAAGTACTGATTTACCCTTATTTTTCTTCACATTTTCGTTACTACCATCTATATAATATACTAAAAGAGAGGAAATCAATGTGGTGATGACAAGTGTCACTCATTGATTCGCCTCTCTTTTTAATTAAAAAAAATAATTTTTTTTTTGAGGGAATTAGAATATTTTATTTAAGGAAGTGTATTATTTATTTTGATTACAAATCCTAAAGATTCTGTTGATAATAAACATCCTAAAAATACTAAGTAAAAATAGAAAATAGAAAAAATATAGACAATCTATTACTATATACTAAAAGAGACACCAGGAATGACACGTGTCACTTCCTGGTGAAAAATTTTCCCGCTAAAAACTCTTTCCTAAAAATATATTTATTTTATTCTTTTTTTATTTTCTCTCCTTTTATATAAATGTTTATATATGGAAAAAAAAATATAGGATTATGGAATATGCCATTATTAAAATTTTGCTAAAATTTTAGTCAAACTGNTTTTTTTTTAAATGAAAATATTTTGTACAAGAATTTCTAACTTGATCGTTTTTAATTTGGTTTTTGATACAGCTAGATCCAGCAGGATGGCTTCCAAAGTTTTTTGTGAATCGGCTGAACACAAAACTTGTAATGATTATTGAAAATCTAAAAAAATTAGCACAAAGAAATCAACTTGCTAGTGCTATATAATTACTTGTACAAAAAACTTTTCAAAAGAAAAAAAAAGTGCAGGGACCATTTTAGTGGTAAAATTTTCTGTCATAGTTGATAGTACTAGTAATTATGAGAGCTTCTACTTGTATTTTATATGTGCTAACTATAACCGGTTAGACGGTAGGACATCTCGTACGCTAATTATTTTATTTTTGTCCACTTTTTTTTTTTTTTTTTCTAGTGGGGTAATTTTATCCACACTAATTTTTAAATGGACCTTGTTCATACTAAATTATTGTGGATCATGTATAAAATAAATAAATTAACAACTTGATTCTTAATTTATTTGACGTGTTTACACTACTACATAAACGAG

mRNA sequence

TATTTTTGTAACACTGTTCTTTTTACACTTTGATGCTATGAGTAGCCCAGCACCTTGCAGCAGCACCTGGTCAATTAGTGAAGATTCACCAAAGAGATATGTACAATATGCAAGCGAGAACTGTATACAAGAGCTGCTGTCAGCGTCAGACTCGAGTAGGAATGGGAATGGAAATGACGGGTGGAAGATTGTTTCGTTAGATAGTGGTATGGAAATATCAAAGCGGCGTTCAGGATCATTCCACATCTTTCGTAGTCGTTGGCTCCTCAAATCAGTCTCTCCTCAGCAGTTCATTTCTGTTGCCAATGCTATTGATGCTGCAAAGGATCTGGAGGAAAATCTGAGCATAATACGTCTAAGATTCGGTGACGCATCAAGGCCGTTGTTTAAGAACAGAGAATTTATTGTATACGAAAGACGTGAGACGATGGATGACGGCACCCTTGTGGTTGCAGTAGCTTCACTCCCAAAAGAGATAGCTGCTGGGTTATACCCTAAGCAAAACAAGGCTATCAGGGGTTTATTGTTACAATCTGGCTGGGTTGTGGAGAAGCTTGAAGATCATTCCTGCATGGTCACCTATGTTGTTCAGCTAGATCCAGCAGGATGGCTTCCAAAGTTTTTTGTGAATCGGCTGAACACAAAACTTGTAATGATTATTGAAAATCTAAAAAAATTAGCACAAAGAAATCAACTTGCTAGTGCTATATAATTACTTGTACAAAAAACTTTTCAAAAGAAAAAAAAAGTGCAGGGACCATTTTAGTGGTAAAATTTTCTGTCATAGTTGATAGTACTAGTAATTATGAGAGCTTCTACTTGTATTTTATATGTGCTAACTATAACCGGTTAGACGGTAGGACATCTCGTACGCTAATTATTTTATTTTTGTCCACTTTTTTTTTTTTTTTTTCTAGTGGGGTAATTTTATCCACACTAATTTTTAAATGGACCTTGTTCATACTAAATTATTGTGGATCATGTATAAAATAAATAAATTAACAACTTGATTCTTAATTTATTTGACGTGTTTACACTACTACATAAACGAG

Coding sequence (CDS)

ATGAGTAGCCCAGCACCTTGCAGCAGCACCTGGTCAATTAGTGAAGATTCACCAAAGAGATATGTACAATATGCAAGCGAGAACTGTATACAAGAGCTGCTGTCAGCGTCAGACTCGAGTAGGAATGGGAATGGAAATGACGGGTGGAAGATTGTTTCGTTAGATAGTGGTATGGAAATATCAAAGCGGCGTTCAGGATCATTCCACATCTTTCGTAGTCGTTGGCTCCTCAAATCAGTCTCTCCTCAGCAGTTCATTTCTGTTGCCAATGCTATTGATGCTGCAAAGGATCTGGAGGAAAATCTGAGCATAATACGTCTAAGATTCGGTGACGCATCAAGGCCGTTGTTTAAGAACAGAGAATTTATTGTATACGAAAGACGTGAGACGATGGATGACGGCACCCTTGTGGTTGCAGTAGCTTCACTCCCAAAAGAGATAGCTGCTGGGTTATACCCTAAGCAAAACAAGGCTATCAGGGGTTTATTGTTACAATCTGGCTGGGTTGTGGAGAAGCTTGAAGATCATTCCTGCATGGTCACCTATGTTGTTCAGCTAGATCCAGCAGGATGGCTTCCAAAGTTTTTTGTGAATCGGCTGAACACAAAACTTGTAATGATTATTGAAAATCTAAAAAAATTAGCACAAAGAAATCAACTTGCTAGTGCTATATAA

Protein sequence

MSSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEISKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAKDLEENLSIIRLRFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSGWVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQRNQLASAI

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03772	Spo03772	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03772.1	Spo03772.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03772.1.utr5p.1	Spo03772.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03772.1.CDS.4	Spo03772.1.CDS.4	CDS
Spo03772.1.CDS.3	Spo03772.1.CDS.3	CDS
Spo03772.1.CDS.2	Spo03772.1.CDS.2	CDS
Spo03772.1.CDS.1	Spo03772.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03772.1.utr3p.1	Spo03772.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03772.1.exon.4	Spo03772.1.exon.4	exon
Spo03772.1.exon.3	Spo03772.1.exon.3	exon
Spo03772.1.exon.2	Spo03772.1.exon.2	exon
Spo03772.1.exon.1	Spo03772.1.exon.1	exon

Homology

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BLAST of Spo03772.1 vs. NCBI nr
Match: gi|731341809|ref|XP_010682083.1| (PREDICTED: PCTP-like protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 402.1 bits (1032), Expect = 6.200e-109
Identity = 207/237 (87.34%), Postives = 214/237 (90.30%), Query Frame = 1


		  
Query: 1   MSSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEI 60
           MSSPAPCSS+WSISEDS +RYV YASENCIQELLSASDSSRNGNGNDGWKI+SLD GMEI
Sbjct: 1   MSSPAPCSSSWSISEDSLRRYVHYASENCIQELLSASDSSRNGNGNDGWKILSLDGGMEI 60

Query: 61  SKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAK-------------DLEENLSIIRL 120
           SKR SGSFHIFRSRWLL+SVSP+QFISVANAIDAAK             DLEENLSIIRL
Sbjct: 61  SKRHSGSFHIFRSRWLLRSVSPEQFISVANAIDAAKQWDRDLVEAKYIKDLEENLSIIRL 120

Query: 121 RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG 180
           RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG
Sbjct: 121 RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG 180

Query: 181 WVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQRNQLASAI 225
           WVVEKLED SCMVTYVVQLDPAGWLPKFFVNRLNTKLVMII NLKK+AQ N L  A+
Sbjct: 181 WVVEKLEDDSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIGNLKKIAQSNPLDGAL 237

[Close]

BLAST of Spo03772.1 vs. NCBI nr
Match: gi|568833189|ref|XP_006470794.1| (PREDICTED: PCTP-like protein isoform X1 [Citrus sinensis])

HSP 1 Score: 366.3 bits (939), Expect = 3.800e-98
Identity = 185/229 (80.79%), Postives = 205/229 (89.52%), Query Frame = 1


		  
Query: 1   MSSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEI 60
           MSSPAPCS +WSISEDS +RYV +ASE+CIQELLSASDS+R GNG+DGWK+++LD G+EI
Sbjct: 1   MSSPAPCSRSWSISEDSLRRYVHFASESCIQELLSASDSNRFGNGDDGWKVLTLDDGVEI 60

Query: 61  SKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAK-------------DLEENLSIIRL 120
           SKRRSGS H FRSRWLLKSVSPQQFI+VANAIDAAK             DLE+NLSIIRL
Sbjct: 61  SKRRSGSLHTFRSRWLLKSVSPQQFITVANAIDAAKQWDSDLVEAKYIKDLEDNLSIIRL 120

Query: 121 RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG 180
           RFG+ S+PLF+NREFIVYERRETM+DGTLVVAVASLPKEIAAGL+PKQN +IRGLLLQSG
Sbjct: 121 RFGEHSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAGLHPKQNNSIRGLLLQSG 180

Query: 181 WVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           WVVEKLED SCMVTYVVQLDPAGW+PK FVNRLNTKLVMIIENL+KLAQ
Sbjct: 181 WVVEKLEDDSCMVTYVVQLDPAGWVPKCFVNRLNTKLVMIIENLRKLAQ 229

[Close]

BLAST of Spo03772.1 vs. NCBI nr
Match: gi|802640508|ref|XP_012078848.1| (PREDICTED: PCTP-like protein isoform X1 [Jatropha curcas])

HSP 1 Score: 363.2 bits (931), Expect = 3.200e-97
Identity = 184/228 (80.70%), Postives = 204/228 (89.47%), Query Frame = 1


		  
Query: 2   SSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEIS 61
           +SP P S +WSISEDS +RYV +ASE+CIQELLSASDS+R GNGNDGWK+V+LD+G+EIS
Sbjct: 3   TSPTPSSRSWSISEDSLRRYVHFASESCIQELLSASDSNRFGNGNDGWKVVTLDNGVEIS 62

Query: 62  KRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAA-------------KDLEENLSIIRLR 121
           KRRSGSFH FRSRW+L+SVSPQQFI+VANAIDAA             KDLE+NLSIIRLR
Sbjct: 63  KRRSGSFHAFRSRWVLRSVSPQQFITVANAIDAARQWDGDLVEARYIKDLEDNLSIIRLR 122

Query: 122 FGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSGW 181
           FG+ S+PLF+NREFIVYERRETM+DGTLVVAVASLPKEIAAGL+PKQN AIRGLLLQSGW
Sbjct: 123 FGENSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAGLHPKQNNAIRGLLLQSGW 182

Query: 182 VVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           VVEKLED SCMVTYVVQLDPAGWLPK FVNRLNTKLVMIIENL+KLAQ
Sbjct: 183 VVEKLEDDSCMVTYVVQLDPAGWLPKCFVNRLNTKLVMIIENLRKLAQ 230

[Close]

BLAST of Spo03772.1 vs. NCBI nr
Match: gi|802640510|ref|XP_012078849.1| (PREDICTED: PCTP-like protein isoform X2 [Jatropha curcas])

HSP 1 Score: 363.2 bits (931), Expect = 3.200e-97
Identity = 184/228 (80.70%), Postives = 204/228 (89.47%), Query Frame = 1


		  
Query: 2   SSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEIS 61
           +SP P S +WSISEDS +RYV +ASE+CIQELLSASDS+R GNGNDGWK+V+LD+G+EIS
Sbjct: 41  TSPTPSSRSWSISEDSLRRYVHFASESCIQELLSASDSNRFGNGNDGWKVVTLDNGVEIS 100

Query: 62  KRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAA-------------KDLEENLSIIRLR 121
           KRRSGSFH FRSRW+L+SVSPQQFI+VANAIDAA             KDLE+NLSIIRLR
Sbjct: 101 KRRSGSFHAFRSRWVLRSVSPQQFITVANAIDAARQWDGDLVEARYIKDLEDNLSIIRLR 160

Query: 122 FGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSGW 181
           FG+ S+PLF+NREFIVYERRETM+DGTLVVAVASLPKEIAAGL+PKQN AIRGLLLQSGW
Sbjct: 161 FGENSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAGLHPKQNNAIRGLLLQSGW 220

Query: 182 VVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           VVEKLED SCMVTYVVQLDPAGWLPK FVNRLNTKLVMIIENL+KLAQ
Sbjct: 221 VVEKLEDDSCMVTYVVQLDPAGWLPKCFVNRLNTKLVMIIENLRKLAQ 268

[Close]

BLAST of Spo03772.1 vs. NCBI nr
Match: gi|567877633|ref|XP_006431375.1| (hypothetical protein CICLE_v10002337mg [Citrus clementina])

HSP 1 Score: 362.1 bits (928), Expect = 7.100e-97
Identity = 183/229 (79.91%), Postives = 204/229 (89.08%), Query Frame = 1


		  
Query: 1   MSSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEI 60
           M+SPAPCS +WSISEDS +RYV +ASE+CIQELLSASDS+R GNG+D WK+++LD G+EI
Sbjct: 1   MNSPAPCSRSWSISEDSLRRYVHFASESCIQELLSASDSNRFGNGDDEWKVLTLDDGVEI 60

Query: 61  SKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAK-------------DLEENLSIIRL 120
           SKRRSGS H FRSRWLLKSVSPQQFI+VANAIDAAK             DLE+NLSIIRL
Sbjct: 61  SKRRSGSLHTFRSRWLLKSVSPQQFITVANAIDAAKQWDSDLVEAKYIKDLEDNLSIIRL 120

Query: 121 RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG 180
           RFG+ S+PLF+NREFIVYERRETM+DGTLVVAVASLPKEIAAGL+PKQN +IRGLLLQSG
Sbjct: 121 RFGEHSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAGLHPKQNNSIRGLLLQSG 180

Query: 181 WVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           WVVEKLED SCMVTYVVQLDPAGW+PK FVNRLNTKLVMIIENL+KLAQ
Sbjct: 181 WVVEKLEDDSCMVTYVVQLDPAGWVPKCFVNRLNTKLVMIIENLRKLAQ 229

[Close]

BLAST of Spo03772.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2V9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g145500 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 4.300e-109
Identity = 207/237 (87.34%), Postives = 214/237 (90.30%), Query Frame = 1


		  
Query: 1   MSSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEI 60
           MSSPAPCSS+WSISEDS +RYV YASENCIQELLSASDSSRNGNGNDGWKI+SLD GMEI
Sbjct: 1   MSSPAPCSSSWSISEDSLRRYVHYASENCIQELLSASDSSRNGNGNDGWKILSLDGGMEI 60

Query: 61  SKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAK-------------DLEENLSIIRL 120
           SKR SGSFHIFRSRWLL+SVSP+QFISVANAIDAAK             DLEENLSIIRL
Sbjct: 61  SKRHSGSFHIFRSRWLLRSVSPEQFISVANAIDAAKQWDRDLVEAKYIKDLEENLSIIRL 120

Query: 121 RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG 180
           RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG
Sbjct: 121 RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG 180

Query: 181 WVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQRNQLASAI 225
           WVVEKLED SCMVTYVVQLDPAGWLPKFFVNRLNTKLVMII NLKK+AQ N L  A+
Sbjct: 181 WVVEKLEDDSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIGNLKKIAQSNPLDGAL 237

[Close]

BLAST of Spo03772.1 vs. UniProtKB/TrEMBL
Match: A0A067KBP6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13373 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.200e-97
Identity = 184/228 (80.70%), Postives = 204/228 (89.47%), Query Frame = 1


		  
Query: 2   SSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEIS 61
           +SP P S +WSISEDS +RYV +ASE+CIQELLSASDS+R GNGNDGWK+V+LD+G+EIS
Sbjct: 3   TSPTPSSRSWSISEDSLRRYVHFASESCIQELLSASDSNRFGNGNDGWKVVTLDNGVEIS 62

Query: 62  KRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAA-------------KDLEENLSIIRLR 121
           KRRSGSFH FRSRW+L+SVSPQQFI+VANAIDAA             KDLE+NLSIIRLR
Sbjct: 63  KRRSGSFHAFRSRWVLRSVSPQQFITVANAIDAARQWDGDLVEARYIKDLEDNLSIIRLR 122

Query: 122 FGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSGW 181
           FG+ S+PLF+NREFIVYERRETM+DGTLVVAVASLPKEIAAGL+PKQN AIRGLLLQSGW
Sbjct: 123 FGENSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAGLHPKQNNAIRGLLLQSGW 182

Query: 182 VVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           VVEKLED SCMVTYVVQLDPAGWLPK FVNRLNTKLVMIIENL+KLAQ
Sbjct: 183 VVEKLEDDSCMVTYVVQLDPAGWLPKCFVNRLNTKLVMIIENLRKLAQ 230

[Close]

BLAST of Spo03772.1 vs. UniProtKB/TrEMBL
Match: V4SZU5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002337mg PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 5.000e-97
Identity = 183/229 (79.91%), Postives = 204/229 (89.08%), Query Frame = 1


		  
Query: 1   MSSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEI 60
           M+SPAPCS +WSISEDS +RYV +ASE+CIQELLSASDS+R GNG+D WK+++LD G+EI
Sbjct: 1   MNSPAPCSRSWSISEDSLRRYVHFASESCIQELLSASDSNRFGNGDDEWKVLTLDDGVEI 60

Query: 61  SKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAK-------------DLEENLSIIRL 120
           SKRRSGS H FRSRWLLKSVSPQQFI+VANAIDAAK             DLE+NLSIIRL
Sbjct: 61  SKRRSGSLHTFRSRWLLKSVSPQQFITVANAIDAAKQWDSDLVEAKYIKDLEDNLSIIRL 120

Query: 121 RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG 180
           RFG+ S+PLF+NREFIVYERRETM+DGTLVVAVASLPKEIAAGL+PKQN +IRGLLLQSG
Sbjct: 121 RFGEHSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAGLHPKQNNSIRGLLLQSG 180

Query: 181 WVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           WVVEKLED SCMVTYVVQLDPAGW+PK FVNRLNTKLVMIIENL+KLAQ
Sbjct: 181 WVVEKLEDDSCMVTYVVQLDPAGWVPKCFVNRLNTKLVMIIENLRKLAQ 229

[Close]

BLAST of Spo03772.1 vs. UniProtKB/TrEMBL
Match: D7TGJ1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g02080 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 9.400e-96
Identity = 179/229 (78.17%), Postives = 203/229 (88.65%), Query Frame = 1


		  
Query: 1   MSSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDSGMEI 60
           MSSPAPC+ +WSISEDS +RYV +ASE+CIQELLSASD++R GN +DGWK+++LD+G+EI
Sbjct: 1   MSSPAPCTRSWSISEDSLRRYVYFASESCIQELLSASDTTRVGNSSDGWKVLTLDNGVEI 60

Query: 61  SKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAK-------------DLEENLSIIRL 120
           SKRRSGS H FRSRWLL+SVSP+QFI+VANAIDAAK             DLE+NLSIIRL
Sbjct: 61  SKRRSGSLHTFRSRWLLRSVSPEQFITVANAIDAAKQWDSDLVEAKYIKDLEDNLSIIRL 120

Query: 121 RFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQSG 180
           RFG++S+PLF+NREFIVYERRETMDDGTLVVAVASLPKEIAAGL+PKQN AIR LLLQSG
Sbjct: 121 RFGESSKPLFRNREFIVYERRETMDDGTLVVAVASLPKEIAAGLHPKQNNAIRALLLQSG 180

Query: 181 WVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           WVVEKLED SCMVTYV+QLDPAGWLPK FVNRLNTKLVMIIENL+K  Q
Sbjct: 181 WVVEKLEDDSCMVTYVIQLDPAGWLPKCFVNRLNTKLVMIIENLRKQVQ 229

[Close]

BLAST of Spo03772.1 vs. UniProtKB/TrEMBL
Match: B9N0K3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s23990g PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 9.400e-96
Identity = 186/230 (80.87%), Postives = 204/230 (88.70%), Query Frame = 1


		  
Query: 2   SSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGN-GNDGWKIVS-LDSGME 61
           + P PCS +WSISEDS +RYV +ASE+CIQELLSASDS+R GN GNDGWKI++ LD+G+E
Sbjct: 4   TGPTPCSRSWSISEDSLRRYVHFASESCIQELLSASDSNRFGNVGNDGWKILTDLDNGVE 63

Query: 62  ISKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAK-------------DLEENLSIIR 121
           ISKRRSGSFH FRSRWLL+SVSPQQFI+VANAIDAAK             DLE+NLSIIR
Sbjct: 64  ISKRRSGSFHTFRSRWLLRSVSPQQFITVANAIDAAKQWEQDLVEARYIKDLEDNLSIIR 123

Query: 122 LRFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYPKQNKAIRGLLLQS 181
           LRFG+ S+PLF+NREFIVYERRETM+DGTLVVAVASLPKEIAAGL+PKQN AIRGLLLQS
Sbjct: 124 LRFGENSKPLFRNREFIVYERRETMEDGTLVVAVASLPKEIAAGLHPKQNNAIRGLLLQS 183

Query: 182 GWVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           GWVVEKLED SCMVTYVVQLDPAGWLPK FVNRLNTKLVMIIENLKKLAQ
Sbjct: 184 GWVVEKLEDDSCMVTYVVQLDPAGWLPKCFVNRLNTKLVMIIENLKKLAQ 233

[Close]

BLAST of Spo03772.1 vs. TAIR (Arabidopsis)
Match: AT5G49800.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 307.8 bits (787), Expect = 5.600e-84
Identity = 158/233 (67.81%), Postives = 192/233 (82.40%), Query Frame = 1


		  
Query: 1   MSSPAPCSSTWSISEDSPKRYVQYASENCIQELLSASDSSRNGNGNDGWKIVSLDS-GME 60
           M+ P P S +WS+SE+S +RYV++ASE+CIQELLS+S++ R GN ++GWK+V  DS G+E
Sbjct: 1   MNGPVPSSRSWSVSEESLRRYVRFASESCIQELLSSSEAGRFGNASNGWKMVRHDSNGVE 60

Query: 61  ISKRRSGSFHIFRSRWLLKSVSPQQFISVANAIDAAK-------------DLEENLSIIR 120
           ISKR SGS H FRSR +L SVSP+QFI+VANAIDAAK             D++ENLS+IR
Sbjct: 61  ISKRDSGSLHAFRSRRILTSVSPEQFITVANAIDAAKQWEGDLVEATHIRDIDENLSVIR 120

Query: 121 LRFGDASRPLFKNREFIVYERRETMDDGTLVVAVASLPKEIAAGLYP---KQNKAIRGLL 180
           LRFG+ S+PLF+NREFI+YERRETM DGTLVVAVASLPKE+A GL P   K+N  IRG L
Sbjct: 121 LRFGENSKPLFRNREFIIYERRETMQDGTLVVAVASLPKEMAEGLEPTEKKKNNYIRGFL 180

Query: 181 LQSGWVVEKLEDHSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKKLAQ 217
           ++SGWV+EKLED SCM+TYVVQLDPAGWLPK FVNRLNTKLVMII+NL+K+AQ
Sbjct: 181 VESGWVLEKLEDTSCMITYVVQLDPAGWLPKCFVNRLNTKLVMIIDNLRKVAQ 233

The following BLAST results are available for this feature:

BLAST of Spo03772.1 vs. NCBI nr
BLAST of Spo03772.1 vs. UniProtKB/TrEMBL
BLAST of Spo03772.1 vs. ExPASy Swiss-Prot
BLAST of Spo03772.1 vs. TAIR (Arabidopsis)

BLAST of Spo03772.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731341809\|ref\|XP_010682083.1\|	6.2e-109	87.3	PREDICTED: PCTP-like protein [...	[more]
gi\|568833189\|ref\|XP_006470794.1\|	3.8e-98	80.7	PREDICTED: PCTP-like protein i...	[more]
gi\|802640508\|ref\|XP_012078848.1\|	3.2e-97	80.7	PREDICTED: PCTP-like protein i...	[more]
gi\|802640510\|ref\|XP_012078849.1\|	3.2e-97	80.7	PREDICTED: PCTP-like protein i...	[more]
gi\|567877633\|ref\|XP_006431375.1\|	7.1e-97	79.9	hypothetical protein CICLE_v10...	[more]

BLAST of Spo03772.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8C2V9_BETVU	4.3e-109	87.3	Uncharacterized protein OS=Bet...	[more]
A0A067KBP6_JATCU	2.2e-97	80.7	Uncharacterized protein OS=Jat...	[more]
V4SZU5_9ROSI	5.0e-97	79.9	Uncharacterized protein OS=Cit...	[more]
D7TGJ1_VITVI	9.4e-96	78.1	Putative uncharacterized prote...	[more]
B9N0K3_POPTR	9.4e-96	80.8	Uncharacterized protein OS=Pop...	[more]

BLAST of Spo03772.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo03772.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT5G49800.1	5.6e-84	67.8	Polyketide cyclase/dehydrase a...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002913	START domain	PFAM	PF01852	START	coord: 117..201 score: 8.
IPR002913	START domain	PROFILE	PS50848	START	coord: 72..198 score: 18
IPR023393	START-like domain	GENE3D	3.30.530.20		coord: 25..217 score: 1.5
None	No IPR available	unknown	Coil	Coil	coord: 197..217 score: -coord: 88..108 scor
None	No IPR available	PANTHER	PTHR19308	PHOSPHATIDYLCHOLINE TRANSFER PROTEIN	coord: 1..216 score: 2.4
None	No IPR available	PANTHER	PTHR19308:SF14	PROTEIN T28D6.7	coord: 1..216 score: 2.4
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 19..217 score: 4.03

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008289	lipid binding