Spo03903.1 (mRNA) | SpinachBase

Overview


Name	Spo03903.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Serine/arginine repetitive matrix protein 2, putative isoform 3
Location	chr1 : 46824597 .. 46828139 (+)
Sequence length	889

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGATCTTTATCGCAAACTCTAACTCGTTTTTCCCCTCTTTCGAATTCTCTATCCACCGCCGCGTCTACCACCCGTCTGATAAACTTCCGACACCGGTCGAATTCGCCGGAGATTAATTCCGTTGAATTCCCGGTGGCGGAGGATACGGAGAAGGTGGCGATTAATACTCTGGAGGACGAAATCCATAACATAATTGTGAAGAGATCTCAACCTGACTGGATCCCTCTTGTTCCCGGTGCTTCTTATTGGGTCCCACCTAGGAGTAAGGCTCATGGGTATGCTAAAGTGATAAGGAAACTGGTTCATTGCTCCGCCGCCACGGCGAGGATGAAGGGTCATACTAATAAGTCGGTATCTCTTTCTTCGAGTCGTGGGTGGCCTTCTTCTGCTCATTACTTCAAAGGTGTTTGTTCTTATTCTGCTCATTTCACCTTTTTTTTTAGTTTGTAATTTATGTTTTGGGGAAAATATGACGATCTTGATTTGAAAATATTGGTTGATAATGATCTTTAACATGCAAGCATAACATGAAGAAGAGGATAGCATAATGCAATTACACTTCAAATTGTTTGGTTCATTTGAGAAAGTGATGATGATTAATCTCAATTTACTAGCTACGCATTAGCATGATTTGAGAGGAAAGCAAAACAATACAGTTAGCTTACCTCTATGATTGGTATGAGGATGTTTGCATTGCGTCTTTTTGGTTTGAATATGCTTGATTAGACTACTACTCCATTGAGAAATAATAGCCATGTATGTATACTATGTTGACTTGTTGAGATGTTCGGAAAATGTTGTCACTTTAGGCAAAAAAGATTACGGCCGAGTTGTGAGGGAAATATGATTGTTACAAAGGTATCTTGATTGTTACAAAGGTATCTTGGTGAAATCAGGTTGAGCTCTTAATTTTGACTTTTGAGGGTGTTGAGACGATGTCATGATCATAAATGGTATTCAAGTAGTCAGATAAGTGTAACTTTTCTGAAAGTTGGGAACTTGATGCTGGCAGGAGGTAGGGGTTAATGGGGGTATGAATTGGCTTGAGATGTTCGAAAAATGTTGTCACCTTTTTTTGTAAGAAAACAAAAAGATAATGATTCGGTAGTGAGCAAAATGGAAAGGATACATTGTTACAAAGGTGTCTTGGTGATGGTGAGAAATCGGGGTGAATTCTTAAATTTACAGGAGGATGTGATGGCAGCAGGTGGGGGTAAATGGGATTATGAATTGGCTTGAGATGTTCGAAAAATGTTGTCAAAAGAGATAATGATGGAGTATTGAGCAAAATGGGAAGGATACAATTATTACAAATGTGTCTTGGTGAGTTGGTGATGGTGAGAATTCGAGGTGAATTCTTAATTTTACAGGGTTTGGAGGATGTGATGATCATATATGGTGCTTGGACGAATGTAGCTTTTCTGAAAGCCAACCAAAGTGATGAATTGGCTTGAGATCAAAGTGATGTGGGCACTTCTAATCTTAGGTGCATATAAGTATATACTCAACACGGATATTGTGTTTTCTATTTTTAAAGTTGAGTAAAATGTAGTGCTCTGTTTTACATATGCATGATAGATGCTTCTTGATAGATTAGAAGTTTGCCAAAAAGGTGGTCTTTTTAATTTTGGTTGCAAGCTTGATTTTGGCTGAATTTAGGCGCATGAAAGACTTACGAAGGTAACCTAATTGCAGGAGGATCCCATTCTCCAATGGAGGGAGAGACAACATCTAAGTACGCATCACAATCAGAGGACGAGGAAGGGTAAATCTGTTCTTCAACAGAAAATTGTATCCAAGGTTAGTTAAGAGCTACCACCTCATATTTTGTTGTAAATGTTTGAATTATCTACATTCAGGGGAGGATGCCGTTAATACCAGGGTTATGCAGTTAATGTTTATTTTTAAAAAAATCAAGCAACGGATGAATCAGATGATTGAACTAACTTGCTGGTAATGAGTGTGTCCATAGTGCCACACTTCTTGGCTTAGTAGTCGTGAGTTCGAACCTAGTTAGTCCATTTTCCTACACTTCCAACTTCTAGTTTTTTTCCTTTATTATTTTATGATATTGGTAGCCATGTTTCTGAACAATTGCTTTCTTACTTCAACATCTCTATTCCAATCTCCTCATCCAATTATTAAAACTATTGTTTATATAGGATTACTTTTGGACCACAGAATAATACCGTATAAGGGACCCAAATAGTCGTCGATGAAATATACAGGCTATGAAAAACGGGTTTGGATTTTGTCTATATAAGTTTGCATACCCTATAAAGTAAATCCTAGATACGCCACTGTCTATGTTGGATAGAATGTTATCCTCATTGTGGGTTGTGCAATTCCGTGAAGCATAAAGAAGATAACTTAAACTCTGAAAGCACTGCTTAAATATAAATGTATATTAAGCTCTCTTTGCCGTCCATGCCTCGACATTTTCTTATTTCAACCCTTGGTCCTTTTCATTTAATTATGTTATCGGTTATTCAAAGCAAGTGTCAGTTTTTGGATGAAAGGAAAGGCCAGCTTTGCAAAATTTTGTAAACTATCAGTCTCCCTTTCCATTTGATTTGAAATTCCAAATTGTGTTTCATAATCTAGTTAGAGGTCCACAATCATTTCCGGTTTCCAGGAAGAATGTTCCATTAGTATTACTTGGGGCATTATCATACATTGCACAAACTTCTCAGACATTTTGCAACAATCTAGAGAGAAATTGATAGAGGAAAACAGGGAATTATTCCTCCTCTGAGTCATCACAGTATATCTCAATTTTCTTGTGCAAGACATTTGTTCATTGAGAAATCTGGCTACATTGATTAATGTTGCCTATATTTTAGAAAATTAAATGCAAATTCCATAAGATATGGTATCCGGCACCACCTGAGGATGATGATAAAGATTGTGATTGCAAATATGACAAATTGTGAACTTAGATGGTGGTGTTGTCTTTGTTGATCAATACTACCCAACAATTGTTTCCAGATAATGAGTTTGTCCACGTTTATGTACTTCCTTTTTTTGTTTAGGTTGTTAAGAACATTATCATTTTGTTACATTAAGTTGTCAAAGAATCCCGAATTTTTCAAATGAAATTGCAGACTTCCACCAACTGTAAATTATTTGTGGAGAAGGTGGGAACTTGACAGACAGATCGGGGGATTGAGAATTTCGACACATGATTGCTGAGCAGAAAGAAGGTGATGAGGAAGCAGCCTGATTTGGGCAAAAGATAAAAGATGGAGAGACAGGATTTTTTCAAGGTGAAAATCAACAACCGTTTACACTTATGAGAAAGAGAGTTGTATCTCCTTTGGAATGCTGGTTGGAAACTGTTTGTATGTAACTTTAGTGTAAAACAAAGATTTCAGCCTTGTGAATATTCGAATCTTGATCCATGTATCAATATCATGTATGTATAAGAGGTGTGGATATACAGATGTTTCAGTTGAAATTCAATAAGTATTCATTGGTAATTTTGTCTGGAAAGATTGTGTTGCAATTCTTTAGTAGGATTGTGGTTCTGAGTCTGCT

mRNA sequence

ATGGCTCGATCTTTATCGCAAACTCTAACTCGTTTTTCCCCTCTTTCGAATTCTCTATCCACCGCCGCGTCTACCACCCGTCTGATAAACTTCCGACACCGGTCGAATTCGCCGGAGATTAATTCCGTTGAATTCCCGGTGGCGGAGGATACGGAGAAGGTGGCGATTAATACTCTGGAGGACGAAATCCATAACATAATTGTGAAGAGATCTCAACCTGACTGGATCCCTCTTGTTCCCGGTGCTTCTTATTGGGTCCCACCTAGGAGTAAGGCTCATGGGGTCATACTAATAAGTCGGTATCTCTTTCTTCGAGTCGTGGGTGGCCTTCTTCTGCTCATTACTTCAAAGGAGGATCCCATTCTCCAATGGAGGGAGAGACAACATCTAAGTACGCATCACAATCAGAGGACGAGGAAGGGTAAATCTGTTCTTCAACAGAAAATTGTATCCAAGACTTCCACCAACTGTAAATTATTTGTGGAGAAGGTGGGAACTTGACAGACAGATCGGGGGATTGAGAATTTCGACACATGATTGCTGAGCAGAAAGAAGGTGATGAGGAAGCAGCCTGATTTGGGCAAAAGATAAAAGATGGAGAGACAGGATTTTTTCAAGGTGAAAATCAACAACCGTTTACACTTATGAGAAAGAGAGTTGTATCTCCTTTGGAATGCTGGTTGGAAACTGTTTGTATGTAACTTTAGTGTAAAACAAAGATTTCAGCCTTGTGAATATTCGAATCTTGATCCATGTATCAATATCATGTATGTATAAGAGGTGTGGATATACAGATGTTTCAGTTGAAATTCAATAAGTATTCATTGGTAATTTTGTCTGGAAAGATTGTGTTGCAATTCTTTAGTAGGATTGTGGTTCTGAGTCTGCT

Coding sequence (CDS)

ATGGCTCGATCTTTATCGCAAACTCTAACTCGTTTTTCCCCTCTTTCGAATTCTCTATCCACCGCCGCGTCTACCACCCGTCTGATAAACTTCCGACACCGGTCGAATTCGCCGGAGATTAATTCCGTTGAATTCCCGGTGGCGGAGGATACGGAGAAGGTGGCGATTAATACTCTGGAGGACGAAATCCATAACATAATTGTGAAGAGATCTCAACCTGACTGGATCCCTCTTGTTCCCGGTGCTTCTTATTGGGTCCCACCTAGGAGTAAGGCTCATGGGGTCATACTAATAAGTCGGTATCTCTTTCTTCGAGTCGTGGGTGGCCTTCTTCTGCTCATTACTTCAAAGGAGGATCCCATTCTCCAATGGAGGGAGAGACAACATCTAAGTACGCATCACAATCAGAGGACGAGGAAGGGTAAATCTGTTCTTCAACAGAAAATTGTATCCAAGACTTCCACCAACTGTAAATTATTTGTGGAGAAGGTGGGAACTTGA

Protein sequence

MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVILISRYLFLRVVGGLLLLITSKEDPILQWRERQHLSTHHNQRTRKGKSVLQQKIVSKTSTNCKLFVEKVGT

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03903	Spo03903	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03903.1	Spo03903.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03903.1.exon.1	Spo03903.1.exon.1	exon
Spo03903.1.exon.2	Spo03903.1.exon.2	exon
Spo03903.1.exon.3	Spo03903.1.exon.3	exon
Spo03903.1.exon.4	Spo03903.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03903.1.CDS.1	Spo03903.1.CDS.1	CDS
Spo03903.1.CDS.2	Spo03903.1.CDS.2	CDS
Spo03903.1.CDS.3	Spo03903.1.CDS.3	CDS
Spo03903.1.CDS.4	Spo03903.1.CDS.4	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03903.1.utr3p.1	Spo03903.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo03903.1 vs. NCBI nr
Match: gi|902201208|gb|KNA13940.1| (hypothetical protein SOVF_112130 [Spinacia oleracea])

HSP 1 Score: 187.2 bits (474), Expect = 2.300e-44
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 1


		  
Query: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60
           MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE
Sbjct: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60

Query: 61  DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVILISRYL 103
           DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHG   + R L
Sbjct: 61  DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGYAKVIRKL 102

[Close]

BLAST of Spo03903.1 vs. NCBI nr
Match: gi|870845663|gb|KMS98343.1| (hypothetical protein BVRB_4g093570 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 112.5 bits (280), Expect = 7.300e-22
Identity = 61/95 (64.21%), Postives = 70/95 (73.68%), Query Frame = 1


		  
Query: 1  MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60
          MARSLSQ  T  S LSN   T +S TRL+N RHRSNSPEI       AE+ EKVAI  LE
Sbjct: 1  MARSLSQLRTHLSILSN---THSSATRLVNLRHRSNSPEILFSGDIPAEEIEKVAIKNLE 60

Query: 61 DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGV 96
          + IH IIVK+S+PDWIP VPGASYWVPP+SK+ G+
Sbjct: 61 EAIHKIIVKKSEPDWIPFVPGASYWVPPKSKSQGL 92

[Close]

BLAST of Spo03903.1 vs. NCBI nr
Match: gi|720055897|ref|XP_010273529.1| (PREDICTED: uncharacterized protein LOC104609040 [Nelumbo nucifera])

HSP 1 Score: 87.0 bits (214), Expect = 3.300e-14
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = 1


		  
Query: 1   MARSLSQTLTRFSP---LSNSLSTAASTTRLINFRHRSNSPE---INSVEFPVAEDTEKV 60
           MAR +SQTL R S    LS+ L   A ++RL+N R+RSN  E   +  V+     + E +
Sbjct: 1   MARIISQTLIRTSSPTFLSSKLPPFAPSSRLVNHRNRSNRSEKAQLIEVDLDPESEVEVL 60

Query: 61  AINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVI 97
            +  LE+ IH IIV+RS PDW+P +PG+SYWVPPR + +G++
Sbjct: 61  GLRRLEEAIHGIIVRRSAPDWLPFIPGSSYWVPPRKRPYGIV 102

[Close]

BLAST of Spo03903.1 vs. NCBI nr
Match: gi|720012560|ref|XP_010259901.1| (PREDICTED: uncharacterized protein LOC104599177 [Nelumbo nucifera])

HSP 1 Score: 85.9 bits (211), Expect = 7.300e-14
Identity = 47/104 (45.19%), Postives = 64/104 (61.54%), Query Frame = 1


		  
Query: 1   MARSLSQTLTRFSP---LSNSLSTAASTTRLINFRHRSNSPE-----INSVEFPVAEDTE 60
           MAR LSQTL R S    LS+     A ++RL+N R RSN  E     +  V+     + E
Sbjct: 1   MARILSQTLIRVSSPSFLSSQSPPFAPSSRLVNHRSRSNRSEKVQAQVIEVDLDSENEVE 60

Query: 61  KVAINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVI 97
            + +  LED IH IIV+RS PDW+P +PG+SYWVPPR + +G++
Sbjct: 61  VLGMRRLEDAIHGIIVRRSAPDWLPFIPGSSYWVPPRKRPYGIV 104

[Close]

BLAST of Spo03903.1 vs. NCBI nr
Match: gi|470136055|ref|XP_004303817.1| (PREDICTED: uncharacterized protein LOC101314195 [Fragaria vesca subsp. vesca])

HSP 1 Score: 79.7 bits (195), Expect = 5.200e-12
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 1


		  
Query: 1  MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVA---IN 60
          MARSLSQTLT    LS   S+++S+ R I  R +SN P  +    P   D+       + 
Sbjct: 1  MARSLSQTLTLTRHLSPKTSSSSSS-RFITLRAQSNLPFHHDQTEPSPADSSPAVDPLLR 60

Query: 61 TLEDEIHNIIVKRSQPDWIPLVPGASYWV-PPRSKAHGV 96
           LED IH IIV++S PDW+P  PGASYWV PPRS++HG+
Sbjct: 61 KLEDAIHRIIVRKSAPDWLPFAPGASYWVPPPRSRSHGL 98

[Close]

BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R357_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112130 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.600e-44
Identity = 96/102 (94.12%), Postives = 97/102 (95.10%), Query Frame = 1


		  
Query: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60
           MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE
Sbjct: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60

Query: 61  DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGVILISRYL 103
           DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHG   + R L
Sbjct: 61  DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGYAKVIRKL 102

[Close]

BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BE44_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g093570 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.100e-22
Identity = 61/95 (64.21%), Postives = 70/95 (73.68%), Query Frame = 1


		  
Query: 1  MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVAINTLE 60
          MARSLSQ  T  S LSN   T +S TRL+N RHRSNSPEI       AE+ EKVAI  LE
Sbjct: 1  MARSLSQLRTHLSILSN---THSSATRLVNLRHRSNSPEILFSGDIPAEEIEKVAIKNLE 60

Query: 61 DEIHNIIVKRSQPDWIPLVPGASYWVPPRSKAHGV 96
          + IH IIVK+S+PDWIP VPGASYWVPP+SK+ G+
Sbjct: 61 EAIHKIIVKKSEPDWIPFVPGASYWVPPKSKSQGL 92

[Close]

BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: A0A164ZX83_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019803 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.400e-11
Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 1


		  
Query: 1   MARSLSQTLTRFSPLSNSLSTAASTTRLIN-FRHRSNS----PEINSVEFPVA-----ED 60
           MAR + QTL R S  S+S S    + R++   RH SN     P++  V+   +     ED
Sbjct: 1   MARMVYQTLIRSSSSSSSYSFMCMSPRILTTHRHGSNQSGKQPQLIEVDLDSSSSSQNED 60

Query: 61  TEKVAINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPP---RSKAHGVI 97
            E + I  LED IHNIIVKRS PDW+P +PG+SYWVPP   R +  GV+
Sbjct: 61  AEVLGIKKLEDVIHNIIVKRSAPDWLPFIPGSSYWVPPPRTRRRNQGVV 109

[Close]

BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: D7KEJ4_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_471880 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-10
Identity = 44/105 (41.90%), Postives = 68/105 (64.76%), Query Frame = 1


		  
Query: 1   MARSLSQTLT----RFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVA- 60
           MARSLS++L+    RF+  S+SL  ++   +L++FR +S+   ++  E   A  ++  + 
Sbjct: 1   MARSLSRSLSLSKGRFATGSSSLPPSS---QLVSFRSQSSDRRVDLYEIDTAAASQSPSD 60

Query: 61  --INTLEDEIHNIIVKRSQPDWIPLVPGASYWVPP---RSKAHGV 96
             I  LED +H I V+R+QPDW+P VPGASYWVPP    S++HG+
Sbjct: 61  PLIQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGI 102

[Close]

BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Match: M5XB67_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012774mg PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.200e-10
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 1


		  
Query: 1  MARSLSQTLTRFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEK-VAINTL 60
          MARS+SQTLT    LS S S+ +S++RLI  R +SN P  +      + D+     +  L
Sbjct: 1  MARSISQTLTLTRHLS-SKSSPSSSSRLITLRAQSNLPFHHDPTTDSSTDSPSDPLLRKL 60

Query: 61 EDEIHNIIVKRSQPDWIPLVPGASYWV-PPRSKAHGV 96
          ED IH I+V+RS PDW+P +PG SYWV PPRS++ G+
Sbjct: 61 EDAIHRIMVRRSAPDWLPFLPGTSYWVPPPRSRSTGL 96

[Close]

BLAST of Spo03903.1 vs. TAIR (Arabidopsis)
Match: AT1G78890.1 (unknown protein)

HSP 1 Score: 71.2 bits (173), Expect = 6.600e-13
Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 1


		  
Query: 1  MARSLSQTLT--RFSPLSNSLSTAASTTRLINFR---HRSNSPEINSV-EFPVAEDTEKV 60
          MARSLS +L+  R+   + SL   +S T  I  +    RSNS  +  + E  +A D    
Sbjct: 1  MARSLSPSLSLSRYRFAAASLLLPSSQTIFIRSQSSNRRSNSNHLGVIYEIDIAADP--- 60

Query: 61 AINTLEDEIHNIIVKRSQPDWIPLVPGASYWV-PPRSKAHGV 96
           +N LED +H I+V+RS PDW+P VPGAS+WV PPRS++HG+
Sbjct: 61 LVNKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSHGI 99

[Close]

BLAST of Spo03903.1 vs. TAIR (Arabidopsis)
Match: AT1G16840.4 (unknown protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.900e-12
Identity = 42/105 (40.00%), Postives = 65/105 (61.90%), Query Frame = 1


		  
Query: 1   MARSLSQTLT----RFSPLSNSLSTAASTTRLINFRHRSNSPEINSVEFPVAEDTEKVA- 60
           MARS S++L+    RF+  S+SL     ++ L++FR +S+    +  E   +  ++  + 
Sbjct: 1   MARSFSRSLSLSKGRFAAASSSL---LPSSHLVSFRSQSSDRRGDLYEIDTSAASQSPSD 60

Query: 61  --INTLEDEIHNIIVKRSQPDWIPLVPGASYWVPP---RSKAHGV 96
             I  LED +H I V+R+QPDW+P VPGASYWVPP    S++HG+
Sbjct: 61  PLIQKLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGI 102

[Close]

BLAST of Spo03903.1 vs. TAIR (Arabidopsis)
Match: AT2G19180.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.600e-6
Identity = 34/94 (36.17%), Postives = 50/94 (53.19%), Query Frame = 1


		  
Query: 1  MARSLSQTLT---RFSPLSNSLSTAASTT--RLINFRHRSNS-PEINSVEFPVAEDTEKV 60
          M+R LS+TL    RF  L    +  A TT   ++ F  R +S P++  +E     + E  
Sbjct: 1  MSRLLSKTLIPNGRF--LLRRFNEPAITTPPNVVCFSRRFSSIPQVIELEIDSKNEAEAA 60

Query: 61 AINTLEDEIHNIIVKRSQPDWIPLVPGASYWVPP 89
           +  L + +  IIV  S PDW+P  PG+S+WVPP
Sbjct: 61 ILKKLNEFVRRIIVHNSTPDWLPFAPGSSFWVPP 92

The following BLAST results are available for this feature:

BLAST of Spo03903.1 vs. NCBI nr
BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
BLAST of Spo03903.1 vs. ExPASy Swiss-Prot
BLAST of Spo03903.1 vs. TAIR (Arabidopsis)

BLAST of Spo03903.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902201208\|gb\|KNA13940.1\|	2.3e-44	94.1	hypothetical protein SOVF_1121...	[more]
gi\|870845663\|gb\|KMS98343.1\|	7.3e-22	64.2	hypothetical protein BVRB_4g09...	[more]
gi\|720055897\|ref\|XP_010273529.1\|	3.3e-14	45.1	PREDICTED: uncharacterized pro...	[more]
gi\|720012560\|ref\|XP_010259901.1\|	7.3e-14	45.1	PREDICTED: uncharacterized pro...	[more]
gi\|470136055\|ref\|XP_004303817.1\|	5.2e-12	48.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo03903.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R357_SPIOL	1.6e-44	94.1	Uncharacterized protein OS=Spi...	[more]
A0A0J8BE44_BETVU	5.1e-22	64.2	Uncharacterized protein OS=Bet...	[more]
A0A164ZX83_DAUCA	1.4e-11	44.9	Uncharacterized protein OS=Dau...	[more]
D7KEJ4_ARALL	1.2e-10	41.9	Putative uncharacterized prote...	[more]
M5XB67_PRUPE	1.2e-10	47.4	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo03903.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo03903.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT1G78890.1	6.6e-13	45.1	unknown protein	[more]
AT1G16840.4	1.9e-12	40.0	unknown protein	[more]
AT2G19180.1	1.6e-6	36.1	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33972	FAMILY NOT NAMED	coord: 2..99 score: 3.4
None	No IPR available	PANTHER	PTHR33972:SF2	EXPRESSED PROTEIN	coord: 2..99 score: 3.4