Spo03906.1 (mRNA) | SpinachBase

Overview


Name	Spo03906.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	BnaA06g02540D protein
Location	chr1 : 46901472 .. 46902329 (+)
Sequence length	858

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGACTTTGACTTTCCTCAAGATAAGGCATCCAACAATCTAACATTATCCACACTTCCAACACAAAGTTTATCACTCTTTGATTTCTTTAGTTCATCATTCATGGCTTCTTTTCTTGGCCACAACTCTTTACAAACATTCCTCAAATCATCCAACATCCTATTCTCCCAAAAGCCCAAAACCTTAATCACCTATGCATCATCATCATCATTCCCAGCAAGAGACAAAATCATAGACTTTGGTAAATTCAAAGGAAGAATGCTAGGAACTCTACCTTCAACCTACCTAAAATGGGTGTCCAACAATCTCAGAGCAAGGGACTTTGAAGAGTGGGCTAAGTTAGCTGATCAAGTACTCGAAGACCATGTATACAAAGACCGTATAGAGTGGGAGTATGCTGAAAAGCTTCTCAATGGAGATGTCTTAACCGCTAATTCTAAGTCTGAAGGTGTGGTTGCTGAACTGCTTGATATAAGTCAGAGGTTTGGGTGGGATAATGATGATAAAGTTGGGTGGAGTAAGATTGATTATCAGCTTCTTGGAACCTCTAAAGGGAAGAGGATACCAAGGTTGAAGGAGAGGAATGATGGAGAGTTGCAGAATTTGAAGAGAGAAAAAGCTGACAGGAGTAGAGAGGTTGGTGTGAGGGATAAGAGAGTTGAGAGAAGAGAGAGGTTGAGGATTCAGAGAGGGTTGTTAAGCATGAATAATGATCATAATAATAGGTTTAACAATGTGGTTAAGGAAGGAGATGTGGGAAAAGAGAGTTCTGATCAAAATGCAGGGGTTTACAGTCCATTTCCTGGAAGAGAAACACTCCTAAGAAATGCTCTTAATCGGCGAAGAATTGTTTAG

mRNA sequence

ATGCTTGACTTTGACTTTCCTCAAGATAAGGCATCCAACAATCTAACATTATCCACACTTCCAACACAAAGTTTATCACTCTTTGATTTCTTTAGTTCATCATTCATGGCTTCTTTTCTTGGCCACAACTCTTTACAAACATTCCTCAAATCATCCAACATCCTATTCTCCCAAAAGCCCAAAACCTTAATCACCTATGCATCATCATCATCATTCCCAGCAAGAGACAAAATCATAGACTTTGGTAAATTCAAAGGAAGAATGCTAGGAACTCTACCTTCAACCTACCTAAAATGGGTGTCCAACAATCTCAGAGCAAGGGACTTTGAAGAGTGGGCTAAGTTAGCTGATCAAGTACTCGAAGACCATGTATACAAAGACCGTATAGAGTGGGAGTATGCTGAAAAGCTTCTCAATGGAGATGTCTTAACCGCTAATTCTAAGTCTGAAGGTGTGGTTGCTGAACTGCTTGATATAAGTCAGAGGTTTGGGTGGGATAATGATGATAAAGTTGGGTGGAGTAAGATTGATTATCAGCTTCTTGGAACCTCTAAAGGGAAGAGGATACCAAGGTTGAAGGAGAGGAATGATGGAGAGTTGCAGAATTTGAAGAGAGAAAAAGCTGACAGGAGTAGAGAGGTTGGTGTGAGGGATAAGAGAGTTGAGAGAAGAGAGAGGTTGAGGATTCAGAGAGGGTTGTTAAGCATGAATAATGATCATAATAATAGGTTTAACAATGTGGTTAAGGAAGGAGATGTGGGAAAAGAGAGTTCTGATCAAAATGCAGGGGTTTACAGTCCATTTCCTGGAAGAGAAACACTCCTAAGAAATGCTCTTAATCGGCGAAGAATTGTTTAG

Coding sequence (CDS)

ATGCTTGACTTTGACTTTCCTCAAGATAAGGCATCCAACAATCTAACATTATCCACACTTCCAACACAAAGTTTATCACTCTTTGATTTCTTTAGTTCATCATTCATGGCTTCTTTTCTTGGCCACAACTCTTTACAAACATTCCTCAAATCATCCAACATCCTATTCTCCCAAAAGCCCAAAACCTTAATCACCTATGCATCATCATCATCATTCCCAGCAAGAGACAAAATCATAGACTTTGGTAAATTCAAAGGAAGAATGCTAGGAACTCTACCTTCAACCTACCTAAAATGGGTGTCCAACAATCTCAGAGCAAGGGACTTTGAAGAGTGGGCTAAGTTAGCTGATCAAGTACTCGAAGACCATGTATACAAAGACCGTATAGAGTGGGAGTATGCTGAAAAGCTTCTCAATGGAGATGTCTTAACCGCTAATTCTAAGTCTGAAGGTGTGGTTGCTGAACTGCTTGATATAAGTCAGAGGTTTGGGTGGGATAATGATGATAAAGTTGGGTGGAGTAAGATTGATTATCAGCTTCTTGGAACCTCTAAAGGGAAGAGGATACCAAGGTTGAAGGAGAGGAATGATGGAGAGTTGCAGAATTTGAAGAGAGAAAAAGCTGACAGGAGTAGAGAGGTTGGTGTGAGGGATAAGAGAGTTGAGAGAAGAGAGAGGTTGAGGATTCAGAGAGGGTTGTTAAGCATGAATAATGATCATAATAATAGGTTTAACAATGTGGTTAAGGAAGGAGATGTGGGAAAAGAGAGTTCTGATCAAAATGCAGGGGTTTACAGTCCATTTCCTGGAAGAGAAACACTCCTAAGAAATGCTCTTAATCGGCGAAGAATTGTTTAG

Protein sequence

MLDFDFPQDKASNNLTLSTLPTQSLSLFDFFSSSFMASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVGVRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLLRNALNRRRIV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo03906	Spo03906	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo03906.1	Spo03906.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03906.1.exon.1	Spo03906.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo03906.1.CDS.1	Spo03906.1.CDS.1	CDS

Homology

[Close]

BLAST of Spo03906.1 vs. NCBI nr
Match: gi|902201202|gb|KNA13934.1| (hypothetical protein SOVF_112070 [Spinacia oleracea])

HSP 1 Score: 491.5 bits (1264), Expect = 9.900e-136
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


		  
Query: 36  MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 95
           MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST
Sbjct: 1   MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 60

Query: 96  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 155
           YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE
Sbjct: 61  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 120

Query: 156 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG 215
           LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG
Sbjct: 121 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG 180

Query: 216 VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL 275
           VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL
Sbjct: 181 VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL 240

Query: 276 RNALNRRRIV 286
           RNALNRRRIV
Sbjct: 241 RNALNRRRIV 250

[Close]

BLAST of Spo03906.1 vs. NCBI nr
Match: gi|731365369|ref|XP_010694488.1| (PREDICTED: uncharacterized protein LOC104907276 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 323.6 bits (828), Expect = 3.600e-85
Identity = 179/269 (66.54%), Postives = 209/269 (77.70%), Query Frame = 1


		  
Query: 36  MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 95
           M SFLG+NSL TFL SS +  SQ  K L    + +S PARDK IDFGK+KGRMLGTLPST
Sbjct: 1   MTSFLGNNSLHTFLSSSKLPNSQNSKCLRYKVTYASLPARDKTIDFGKYKGRMLGTLPST 60

Query: 96  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 155
           YLKWVS+NLRARDFEEWAKLADQVLED VYKDR+EWE A+KLLNGDVL  NSK EGVVAE
Sbjct: 61  YLKWVSSNLRARDFEEWAKLADQVLEDPVYKDRMEWESAQKLLNGDVLNVNSKPEGVVAE 120

Query: 156 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKR---EKADRSR 215
           LL++SQRFGWDN+DKVGWSKID+QLLGTSKG RIPR+KE+   EL ++KR   E+ +R R
Sbjct: 121 LLEVSQRFGWDNEDKVGWSKIDFQLLGTSKGGRIPRVKEKRGEELASMKRVEVEERERWR 180

Query: 216 E---------VGVRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVG------KES 275
           +         VGVR++R ERR+RLR++RG+L+MN   NNRF+N V+E   G      KES
Sbjct: 181 DERSEGGSGKVGVRERRDERRDRLRMKRGMLNMNK--NNRFSNAVEEEYQGNKYRRNKES 240

Query: 276 SDQN-AGVYSPFPGRETLLRNALNRRRIV 286
           SD N A VY+PFPGRETLL   LNRRR+V
Sbjct: 241 SDSNGAEVYNPFPGRETLLNKVLNRRRVV 267

[Close]

BLAST of Spo03906.1 vs. NCBI nr
Match: gi|661897728|emb|CDO99440.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 218.8 bits (556), Expect = 1.200e-53
Identity = 119/234 (50.85%), Postives = 162/234 (69.23%), Query Frame = 1


		  
Query: 70  SSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRI 129
           ++ PARD++IDFGK+KG+M+G+LPS YLKWVS NLRARDFEEWAKLAD+VLED VYKDRI
Sbjct: 31  NAIPARDRVIDFGKYKGKMVGSLPSNYLKWVSKNLRARDFEEWAKLADEVLEDPVYKDRI 90

Query: 130 EWEYAEKLLNGDVLTANS---KSEGVVAELLDISQRFGWDNDDKVGWSKIDYQLLGTSKG 189
           EWE+A+K+LNGDVL++ S   + +  V+ L++IS+RFGWDN+DK+GW+K+D++LLGTSKG
Sbjct: 91  EWEFAQKVLNGDVLSSKSVQLQQKSAVSGLVEISERFGWDNEDKLGWAKVDFRLLGTSKG 150

Query: 190 KRIPRLKE-----RNDGELQNLKREKADRSREVGVRDKRVERRERLRIQRGLLSMNN--- 249
            RIPR+ +       DG L+ +K +  +      V+ +R ERRERL+++R      N   
Sbjct: 151 GRIPRVSDSGPRVMRDGGLEIVKPKAGESG---PVKGRRKERRERLKLRRRKNGERNGIK 210

Query: 250 -DHNNRFNNVVK---EGDVGKESSDQNAGVY-----SPFPGRETLLRNALNRRR 284
            D    F N  K   +GD  +   D+   +      S FPGRE  L+ A+NRRR
Sbjct: 211 VDDKGNFGNSSKNKLDGDQEEVDEDRRVDIIKTKSSSVFPGREAFLKKAVNRRR 261

[Close]

BLAST of Spo03906.1 vs. NCBI nr
Match: gi|460369099|ref|XP_004230401.1| (PREDICTED: uncharacterized protein LOC101252228 [Solanum lycopersicum])

HSP 1 Score: 218.0 bits (554), Expect = 2.100e-53
Identity = 124/250 (49.60%), Postives = 169/250 (67.60%), Query Frame = 1


		  
Query: 52  SNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEE 111
           S  L  ++  T +   S    PARD++IDFGK+KG+MLGTLPS YLKWV+ NLRARDFEE
Sbjct: 25  SQSLSLRRSITPLAIVSRKVIPARDRVIDFGKYKGKMLGTLPSKYLKWVTKNLRARDFEE 84

Query: 112 WAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKV 171
           WA+LADQVL D +Y+DRIEWE+A+ LLNGDV  A ++S   V+ELL+IS RF WDN+DK+
Sbjct: 85  WAQLADQVLSDPIYRDRIEWEFAQNLLNGDVSPARTQSS--VSELLEISTRFRWDNEDKL 144

Query: 172 GWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREK----ADRSREVGVRDKRVERRERL 231
           GWSKID++LLGTSKG RIPRL +  +  ++   ++K     D S++ G +D R  RRER+
Sbjct: 145 GWSKIDFELLGTSKGGRIPRLSDSPNNSIRVEDKKKGTDGVDSSQDDGEKDNRERRRERI 204

Query: 232 RIQR-----GLLS-------MNNDHNNRFNNVVKEGDVGKESSDQNAG---VYSPFPGRE 283
           ++QR     G  S        N+DH     N +K   +G  +++ ++G     S FPGRE
Sbjct: 205 KLQRRPNESGQRSTSVTQRRANSDH----FNPLKSDPIGATNNNTSSGRTETPSRFPGRE 264

[Close]

BLAST of Spo03906.1 vs. NCBI nr
Match: gi|697154817|ref|XP_009631645.1| (PREDICTED: uncharacterized protein LOC104121375 [Nicotiana tomentosiformis])

HSP 1 Score: 217.2 bits (552), Expect = 3.600e-53
Identity = 139/300 (46.33%), Postives = 182/300 (60.67%), Query Frame = 1


		  
Query: 2   LDFDFPQDKASNNLTL---STLPTQSLSLFDFFSSSFMASFLGHNSLQTFLKSSNILFSQ 61
           LDF F  + + +++ L     +P  SL++     S F        S  +F  SS  L  +
Sbjct: 18  LDFFFNSNISHSDMNLLHFHPIPQCSLNVSSPTISRFQVG-----SYSSFPPSSQSLSLR 77

Query: 62  KPKTLITYASSS------SFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEW 121
           +  +  T ++ S        PARD++IDFGK+KG+MLGTLPS YLKWVS NLRARDFEEW
Sbjct: 78  RNISSFTISAGSRATGPRQIPARDRVIDFGKYKGKMLGTLPSKYLKWVSKNLRARDFEEW 137

Query: 122 AKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKVG 181
           AKLAD+VL D VYKDRIEWE+A+ LLNGDV   ++ ++  V+ELL+IS RFGWDN+DK+G
Sbjct: 138 AKLADEVLSDSVYKDRIEWEFAQNLLNGDV---SASTQSAVSELLEISTRFGWDNEDKLG 197

Query: 182 WSKIDYQLLGTSKGKRIPRL--KERNDGELQNLKREKADRSREV--GVRDKRVERRERLR 241
           WSKIDY+LLGTSKG RIPRL     N+  L+ +    + +  E   G +D R  RRER+R
Sbjct: 198 WSKIDYELLGTSKGGRIPRLSYSPNNNTNLKGIAEVDSSQEEETGKGEKDSRERRRERIR 257

Query: 242 IQR-----GLLSMNNDHNNRFNNVVKEGD---VGKESSDQNAGVYSPFPGRETLLRNALN 281
           +QR     G  S   +      N     D   + K+ S  N G  S FPGRE LL+ AL+
Sbjct: 258 LQRRKNDSGSPSTMTERTRNLQNPENHTDYNTINKDHSVSNTG--SRFPGREALLKAALS 307

[Close]

BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4R3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_112070 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 6.900e-136
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1


		  
Query: 36  MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 95
           MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST
Sbjct: 1   MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 60

Query: 96  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 155
           YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE
Sbjct: 61  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 120

Query: 156 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG 215
           LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG
Sbjct: 121 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVG 180

Query: 216 VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL 275
           VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL
Sbjct: 181 VRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLL 240

Query: 276 RNALNRRRIV 286
           RNALNRRRIV
Sbjct: 241 RNALNRRRIV 250

[Close]

BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BE33_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g093470 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 2.500e-85
Identity = 179/269 (66.54%), Postives = 209/269 (77.70%), Query Frame = 1


		  
Query: 36  MASFLGHNSLQTFLKSSNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPST 95
           M SFLG+NSL TFL SS +  SQ  K L    + +S PARDK IDFGK+KGRMLGTLPST
Sbjct: 1   MTSFLGNNSLHTFLSSSKLPNSQNSKCLRYKVTYASLPARDKTIDFGKYKGRMLGTLPST 60

Query: 96  YLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAE 155
           YLKWVS+NLRARDFEEWAKLADQVLED VYKDR+EWE A+KLLNGDVL  NSK EGVVAE
Sbjct: 61  YLKWVSSNLRARDFEEWAKLADQVLEDPVYKDRMEWESAQKLLNGDVLNVNSKPEGVVAE 120

Query: 156 LLDISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKR---EKADRSR 215
           LL++SQRFGWDN+DKVGWSKID+QLLGTSKG RIPR+KE+   EL ++KR   E+ +R R
Sbjct: 121 LLEVSQRFGWDNEDKVGWSKIDFQLLGTSKGGRIPRVKEKRGEELASMKRVEVEERERWR 180

Query: 216 E---------VGVRDKRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVG------KES 275
           +         VGVR++R ERR+RLR++RG+L+MN   NNRF+N V+E   G      KES
Sbjct: 181 DERSEGGSGKVGVRERRDERRDRLRMKRGMLNMNK--NNRFSNAVEEEYQGNKYRRNKES 240

Query: 276 SDQN-AGVYSPFPGRETLLRNALNRRRIV 286
           SD N A VY+PFPGRETLL   LNRRR+V
Sbjct: 241 SDSNGAEVYNPFPGRETLLNKVLNRRRVV 267

[Close]

BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: A0A068TT13_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026614001 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 8.700e-54
Identity = 119/234 (50.85%), Postives = 162/234 (69.23%), Query Frame = 1


		  
Query: 70  SSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQVLEDHVYKDRI 129
           ++ PARD++IDFGK+KG+M+G+LPS YLKWVS NLRARDFEEWAKLAD+VLED VYKDRI
Sbjct: 31  NAIPARDRVIDFGKYKGKMVGSLPSNYLKWVSKNLRARDFEEWAKLADEVLEDPVYKDRI 90

Query: 130 EWEYAEKLLNGDVLTANS---KSEGVVAELLDISQRFGWDNDDKVGWSKIDYQLLGTSKG 189
           EWE+A+K+LNGDVL++ S   + +  V+ L++IS+RFGWDN+DK+GW+K+D++LLGTSKG
Sbjct: 91  EWEFAQKVLNGDVLSSKSVQLQQKSAVSGLVEISERFGWDNEDKLGWAKVDFRLLGTSKG 150

Query: 190 KRIPRLKE-----RNDGELQNLKREKADRSREVGVRDKRVERRERLRIQRGLLSMNN--- 249
            RIPR+ +       DG L+ +K +  +      V+ +R ERRERL+++R      N   
Sbjct: 151 GRIPRVSDSGPRVMRDGGLEIVKPKAGESG---PVKGRRKERRERLKLRRRKNGERNGIK 210

Query: 250 -DHNNRFNNVVK---EGDVGKESSDQNAGVY-----SPFPGRETLLRNALNRRR 284
            D    F N  K   +GD  +   D+   +      S FPGRE  L+ A+NRRR
Sbjct: 211 VDDKGNFGNSSKNKLDGDQEEVDEDRRVDIIKTKSSSVFPGREAFLKKAVNRRR 261

[Close]

BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: K4B1L2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.500e-53
Identity = 124/250 (49.60%), Postives = 169/250 (67.60%), Query Frame = 1


		  
Query: 52  SNILFSQKPKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEE 111
           S  L  ++  T +   S    PARD++IDFGK+KG+MLGTLPS YLKWV+ NLRARDFEE
Sbjct: 25  SQSLSLRRSITPLAIVSRKVIPARDRVIDFGKYKGKMLGTLPSKYLKWVTKNLRARDFEE 84

Query: 112 WAKLADQVLEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKV 171
           WA+LADQVL D +Y+DRIEWE+A+ LLNGDV  A ++S   V+ELL+IS RF WDN+DK+
Sbjct: 85  WAQLADQVLSDPIYRDRIEWEFAQNLLNGDVSPARTQSS--VSELLEISTRFRWDNEDKL 144

Query: 172 GWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREK----ADRSREVGVRDKRVERRERL 231
           GWSKID++LLGTSKG RIPRL +  +  ++   ++K     D S++ G +D R  RRER+
Sbjct: 145 GWSKIDFELLGTSKGGRIPRLSDSPNNSIRVEDKKKGTDGVDSSQDDGEKDNRERRRERI 204

Query: 232 RIQR-----GLLS-------MNNDHNNRFNNVVKEGDVGKESSDQNAG---VYSPFPGRE 283
           ++QR     G  S        N+DH     N +K   +G  +++ ++G     S FPGRE
Sbjct: 205 KLQRRPNESGQRSTSVTQRRANSDH----FNPLKSDPIGATNNNTSSGRTETPSRFPGRE 264

[Close]

BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HB17_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.300e-53
Identity = 114/233 (48.93%), Postives = 157/233 (67.38%), Query Frame = 1


		  
Query: 60  PKTLITYASSSSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRARDFEEWAKLADQV 119
           P  +    S    PARD++IDFGK+KG+MLGTLPS YLKWV+ NLRARDFEEWA+LADQV
Sbjct: 4   PLAISAIGSRKVIPARDRVIDFGKYKGKMLGTLPSKYLKWVTKNLRARDFEEWAQLADQV 63

Query: 120 LEDHVYKDRIEWEYAEKLLNGDVLTANSKSEGVVAELLDISQRFGWDNDDKVGWSKIDYQ 179
           L D +YKDRIEWE+A+ LLNGDV  A +++   V+ELL+IS RF WDNDDK+GWSKID++
Sbjct: 64  LSDPIYKDRIEWEFAQNLLNGDVSPAGTQT--AVSELLEISTRFRWDNDDKLGWSKIDFE 123

Query: 180 LLGTSKGKRIPRLKERNDGELQNLKREKADRSREVGVRDKRVERRERLRIQR-------- 239
           LLGTSKG RIPRL +  +  ++   ++  D  +E G +D R  RRER+++QR        
Sbjct: 124 LLGTSKGGRIPRLSDSPNNSIRVEDKKGVDIPQEDGEKDNRERRRERVKLQRRQNESGSP 183

Query: 240 ----GLLSMNNDHNNRFNNVVKEGDVGKESSDQNAGVYSPFPGRETLLRNALN 281
                 ++    +++ FN    +     ++++ +    S FPGRE+LL+ AL+
Sbjct: 184 LQRSTSITQRRANSDHFNRPKSDPIRSFDTTNYSTETPSRFPGRESLLKKALS 234

[Close]

BLAST of Spo03906.1 vs. TAIR (Arabidopsis)
Match: AT1G51080.1 (unknown protein)

HSP 1 Score: 202.6 bits (514), Expect = 3.200e-52
Identity = 126/256 (49.22%), Postives = 165/256 (64.45%), Query Frame = 1


		  
Query: 49  LKSSNILFS-QKPKTLITYASS-SSFPARDKIIDFGKFKGRMLGTLPSTYLKWVSNNLRA 108
           L SSN +FS  + K LI       +  ARD IIDFGK KG+MLGTLPS+YLKWVS NLRA
Sbjct: 36  LSSSNGIFSTNQSKPLIKKLQIIETLAARDTIIDFGKHKGKMLGTLPSSYLKWVSKNLRA 95

Query: 109 RDFEEWAKLADQVLEDHVYKDRIEWEYAEKLLNGD-----VLTANSKSE---GVVAELLD 168
             FE WAKLAD+VLED VYKDR EWE+AEK+L+G       LT+  KS      V+ LL+
Sbjct: 96  GVFEYWAKLADEVLEDDVYKDRTEWEFAEKILHGSDESMRALTSVRKSREEVNSVSMLLE 155

Query: 169 ISQRFGWDNDDKVGWSKIDYQLLGTSKGKRIPRLKERNDGELQNLKREKADRSREVGVRD 228
           IS+RFGWDN+DK+GWSKI+++LLGTSKG RIPRL++ N+ E +   R +  R RE+  ++
Sbjct: 156 ISERFGWDNEDKIGWSKINFELLGTSKGGRIPRLRKANEEEEE---RGEMVRRREIKKKE 215

Query: 229 --------KRVERRERLRIQRGLLSMNNDHNNRFNNVVKEGDVGKESSDQNA---GVYSP 284
                   +R +RRER+R      S+  D     N   ++G +GK    +      + SP
Sbjct: 216 EEEDENGWRRKQRRERMR-----QSLGRDDGKTVNRSEQKGVLGKLEDVEKQLEPKIQSP 275

The following BLAST results are available for this feature:

BLAST of Spo03906.1 vs. NCBI nr
BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
BLAST of Spo03906.1 vs. ExPASy Swiss-Prot
BLAST of Spo03906.1 vs. TAIR (Arabidopsis)

BLAST of Spo03906.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902201202\|gb\|KNA13934.1\|	9.9e-136	100.	hypothetical protein SOVF_1120...	[more]
gi\|731365369\|ref\|XP_010694488.1\|	3.6e-85	66.5	PREDICTED: uncharacterized pro...	[more]
gi\|661897728\|emb\|CDO99440.1\|	1.2e-53	50.8	unnamed protein product [Coffe...	[more]
gi\|460369099\|ref\|XP_004230401.1\|	2.1e-53	49.6	PREDICTED: uncharacterized pro...	[more]
gi\|697154817\|ref\|XP_009631645.1\|	3.6e-53	46.3	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo03906.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R4R3_SPIOL	6.9e-136	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BE33_BETVU	2.5e-85	66.5	Uncharacterized protein OS=Bet...	[more]
A0A068TT13_COFCA	8.7e-54	50.8	Uncharacterized protein OS=Cof...	[more]
K4B1L2_SOLLC	1.5e-53	49.6	Uncharacterized protein OS=Sol...	[more]
A0A0V0HB17_SOLCH	4.3e-53	48.9	Putative ovule protein (Fragme...	[more]

BLAST of Spo03906.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo03906.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G51080.1	3.2e-52	49.2	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024530	Putative quorum-sensing-regulated virulence factor	PFAM	PF12843	QSregVF_b	coord: 79..102 score: 8.
None	No IPR available	PANTHER	PTHR38357	FAMILY NOT NAMED	coord: 2..285 score: 3.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016556	mRNA modification
cellular_component	GO:0009536	plastid