Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTTATATTCGTCGCCATGCATAGAAGTTATTGTATGAAAAACAATTAAAAAAGAAAAAAATAGTAGTATAAATAAGAGCAATGCCATGAGTAAAAATGAGCAAAACAAATCCACTTCTTAAGTACCATCAAATCTTGTCTCTAAAGTGTGGCTGACATTATGGGTTTCTCCAAATTTGCTCTCTTTGCCATTTTCATGCTCGCTGCATCAGGTATGCATGGAGTTAATTTCACATTTGTTAATTAATCTTTTTAACCGTTAAATTTCCTTTAAAAATGTATATTATATCGAAGCGAATATAACAAGATCTCACATGATCGGCTTTTATGTTAATTATTATACTCGGGACTAATGTAACAAGATCTTAACGCGTAAAAATGGTGTTATTATGAGAAAATGTGTCGATTTGTGTATATGTAGACTGAAATTATTTGGATTTTGCAGCTGTGATAGATGCGAAATATGAAGCAAGAACCACTGCATCGATAATGACTGAAGAGCTCCTGAAGGCCGAAGTGAAGGCAATGTCATCACTTAGGGAAGTGGAAAGGGCTGTTGCTTCAAAATTGAAGCAAAATGTGATGATGACTGAAGATAAGTGTTCTCCATCAGGGAACATATGCTCGGGTTTCGGACCTCCGGAACAATGTTGTTCCGGCGCTTGTGTTCCTCATCCTATATTAAGGATCTTTGTATGCCAGTAAAAGGTCGGGTCGAGTCGGCTCGGGTTGGGTCGGGTCGAGTCGAGTCGATCATCACCATCAATTTCCTTTGTTAATTATGTACTCCGATTATCCGTACTTTGTAGTGTACCTGTGTACGAGATATAATAAAATTGACGAAGGTGTTGGTGAAGGAATTTTTTTATGGACTCCGGATTCTCGATTTCTGGATTAACACAAGCATTTTTTGTCATTTAACACCTTAAAAAAATTACTTTTTGTAATTAACACCTTATTTATTTTTTATTATATTTAAACACCTTAAAAATCTAAAAATTTATAAATCAACACCGTTTAACGATTTCCATAAGAAAAAAACGTTGATTTTTAATCATGCTATAACTTCCAAAGCATAATTTGATGGTAGAAGGAGTTGTTTACCACCATATCATGCCTTGGGAACTTTAGCATAGTTAAAAACTAATGTTTTTTCTAACAAAAATTGTCAAGTGGTGTTGATTTCTAAATTTTTTTGTTTTTAAGGTGTTTAAAAACAATAAAAAAATAAGTAAGGTGTTAAATTATAAAAACTACTCCCTCCATTTCTAAATGTTGTATCCATTTGGAATCTTGGGGGTTTTAAGAAAAATAGAATCTTGATTTGTATGGGTATAAGTGTAATGATTGGGTGTAAGAGAAATGATTGTGTGTAAGAGATTGGAATAAATGAAAGAGAGAGAAAATAATAAAGAAATAAGAGAAAAGGTATATATTTTATTAATAGTAATAATAAATCAGATTATAGGTTCTCTTCTCCCTCAATGGGCTAACATTACCAAACAAAATTCAACTAACATTACCAACAAAAATTCAAGAACATTACCAACAAAAAGTACCATTATCCAAGAACAAAAATCACCAACAAAATTTCACCTTAATCGAACAAATTTAACGAACCCATAAAGTCGAACAAACAATTCACCGAAAATAAACAAAAATCGAACAAAAATTCAACAACCCCAGAAAAAATCAAACAAAAATCAACGACATTCAACGAACAAAAATTCACCAAATTAACCTAGAAAAATCGAATAAAAATTCACCGAAATTACCCACAAAAATCGAACAAAAAATCACCGAAATTACCAAGAAAAATCGGAAAAAAATTCAACGAATTTCACCACAAAAATTGAAGAAAAATTACCCAAAAAAATCGAAGAATTACCCAGAAAAATTCAACGAACCCAGAAAAGTTCAATGAACCCAAAATTCAACGAACCCAGAAAAATTACCTAGAAAAATTCAACGAACCCAGA CGTTATATTCGTCGCCATGCATAGAAGTTATTGTATGAAAAACAATTAAAAAAGAAAAAAATAGTAGTATAAATAAGAGCAATGCCATGAGTAAAAATGAGCAAAACAAATCCACTTCTTAAGTACCATCAAATCTTGTCTCTAAAGTGTGGCTGACATTATGGGTTTCTCCAAATTTGCTCTCTTTGCCATTTTCATGCTCGCTGCATCAGCTGTGATAGATGCGAAATATGAAGCAAGAACCACTGCATCGATAATGACTGAAGAGCTCCTGAAGGCCGAAGTGAAGGCAATGTCATCACTTAGGGAAGTGGAAAGGGCTGTTGCTTCAAAATTGAAGCAAAATGTGATGATGACTGAAGATAAGTGTTCTCCATCAGGGAACATATGCTCGGGTTTCGGACCTCCGGAACAATGTTGTTCCGGCGCTTGTGTTCCTCATCCTATATTAAGGATCTTTGTATGCCAGTAAAAGGTCGGGTCGAGTCGGCTCGGGTTGGGTCGGGTCGAGTCGAGTCGATCATCACCATCAATTTCCTTTGTTAATTATGTACTCCGATTATCCGTACTTTGTAGTGTACCTGTGTACGAGATATAATAAAATTGACGAAGGTGTTGGTGAAGGAATTTTTTTATGGACTCCGGATTCTCGATTTCTGGATTAACACAAGCATTTTTTGTCATTTAACACCTTAAAAAAATTACTTTTTGTAATTAACACCTTATTTATTTTTTATTATATTTAAACACCTTAAAAATCTAAAAATTTATAAATCAACACCGTTTAACGATTTCCATAAGAAAAAAACGTTGATTTTTAATCATGCTATAACTTCCAAAGCATAATTTGATGGTAGAAGGAGTTGTTTACCACCATATCATGCCTTGGGAACTTTAGCATAGTTAAAAACTAATGTTTTTTCTAACAAAAATTGTCAAGTGGTGTTGATTTCTAAATTTTTTTGTTTTTAAGGTGTTTAAAAACAATAAAAAAATAAGTAAGGTGTTAAATTATAAAAACTACTCCCTCCATTTCTAAATGTTGTATCCATTTGGAATCTTGGGGGTTTTAAGAAAAATAGAATCTTGATTTGTATGGGTATAAGTGTAATGATTGGGTGTAAGAGAAATGATTGTGTGTAAGAGATTGGAATAAATGAAAGAGAGAGAAAATAATAAAGAAATAAGAGAAAAGGTATATATTTTATTAATAGTAATAATAAATCAGATTATAGGTTCTCTTCTCCCTCAATGGGCTAACATTACCAAACAAAATTCAACTAACATTACCAACAAAAATTCAAGAACATTACCAACAAAAAGTACCATTATCCAAGAACAAAAATCACCAACAAAATTTCACCTTAATCGAACAAATTTAACGAACCCATAAAGTCGAACAAACAATTCACCGAAAATAAACAAAAATCGAACAAAAATTCAACAACCCCAGAAAAAATCAAACAAAAATCAACGACATTCAACGAACAAAAATTCACCAAATTAACCTAGAAAAATCGAATAAAAATTCACCGAAATTACCCACAAAAATCGAACAAAAAATCACCGAAATTACCAAGAAAAATCGGAAAAAAATTCAACGAATTTCACCACAAAAATTGAAGAAAAATTACCCAAAAAAATCGAAGAATTACCCAGAAAAATTCAACGAACCCAGAAAAGTTCAATGAACCCAAAATTCAACGAACCCAGAAAAATTACCTAGAAAAATTCAACGAACCCAGA ATGGGTTTCTCCAAATTTGCTCTCTTTGCCATTTTCATGCTCGCTGCATCAGCTGTGATAGATGCGAAATATGAAGCAAGAACCACTGCATCGATAATGACTGAAGAGCTCCTGAAGGCCGAAGTGAAGGCAATGTCATCACTTAGGGAAGTGGAAAGGGCTGTTGCTTCAAAATTGAAGCAAAATGTGATGATGACTGAAGATAAGTGTTCTCCATCAGGGAACATATGCTCGGGTTTCGGACCTCCGGAACAATGTTGTTCCGGCGCTTGTGTTCCTCATCCTATATTAAGGATCTTTGTATGCCAGTAA MGFSKFALFAIFMLAASAVIDAKYEARTTASIMTEELLKAEVKAMSSLREVERAVASKLKQNVMMTEDKCSPSGNICSGFGPPEQCCSGACVPHPILRIFVCQ Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo04126.1 vs. NCBI nr
Match: gi|902192504|gb|KNA12060.1| (hypothetical protein SOVF_129340 [Spinacia oleracea]) HSP 1 Score: 178.7 bits (452), Expect = 5.100e-42 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1
BLAST of Spo04126.1 vs. NCBI nr
Match: gi|902198410|gb|KNA13658.1| (hypothetical protein SOVF_114660 [Spinacia oleracea]) HSP 1 Score: 175.3 bits (443), Expect = 5.700e-41 Identity = 93/106 (87.74%), Postives = 100/106 (94.34%), Query Frame = 1
BLAST of Spo04126.1 vs. NCBI nr
Match: gi|902198409|gb|KNA13657.1| (hypothetical protein SOVF_114650 [Spinacia oleracea]) HSP 1 Score: 157.1 bits (396), Expect = 1.600e-35 Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 1
BLAST of Spo04126.1 vs. NCBI nr
Match: gi|902198411|gb|KNA13659.1| (hypothetical protein SOVF_114670 [Spinacia oleracea]) HSP 1 Score: 129.8 bits (325), Expect = 2.700e-27 Identity = 71/104 (68.27%), Postives = 82/104 (78.85%), Query Frame = 1
BLAST of Spo04126.1 vs. NCBI nr
Match: gi|731335337|ref|XP_010678676.1| (PREDICTED: uncharacterized protein LOC104894196 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 114.0 bits (284), Expect = 1.600e-22 Identity = 58/104 (55.77%), Postives = 82/104 (78.85%), Query Frame = 1
BLAST of Spo04126.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXT1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_129340 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.600e-42 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1
BLAST of Spo04126.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2C8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114660 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 4.000e-41 Identity = 93/106 (87.74%), Postives = 100/106 (94.34%), Query Frame = 1
BLAST of Spo04126.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4D4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114650 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 1.100e-35 Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 1
BLAST of Spo04126.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R400_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_114670 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.900e-27 Identity = 71/104 (68.27%), Postives = 82/104 (78.85%), Query Frame = 1
BLAST of Spo04126.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CER6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g116170 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.100e-22 Identity = 58/104 (55.77%), Postives = 82/104 (78.85%), Query Frame = 1
BLAST of Spo04126.1 vs. ExPASy Swiss-Prot
Match: ITR3_SPIOL (Trypsin inhibitor 3 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.800e-16 Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 1
BLAST of Spo04126.1 vs. ExPASy Swiss-Prot
Match: ITR2_SPIOL (Trypsin inhibitor 2 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.100e-15 Identity = 35/36 (97.22%), Postives = 35/36 (97.22%), Query Frame = 1
BLAST of Spo04126.1 vs. ExPASy Swiss-Prot
Match: ITR1_SPIOL (Trypsin inhibitor 1 OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 7.000e-15 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo04126.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo04126.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo04126.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo04126.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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