Spo04272.1 (mRNA) | SpinachBase

Overview


Name	Spo04272.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Expressed protein
Location	chr4 : 58065836 .. 58074022 (-)
Sequence length	1612

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGAGTTCGGGTCATTTTTCGGTCGGGTCAGTTGATTCAATTCTGTTATCGGTTATATTTCGATCGGGTGCCAGGTTCGGGTCTAAGTCGTGCATTAACGGGTCAAAATCGATCGTCGGTTTTAACGGGTTGGATACGATCAGGTTACGGGTTTTCTATTTTAACAACATTTCTGATCTCGAGTCGAGTCCAGGTCTTTAAAACACATGTTAGTTCAGGTCGATTTCTCGAACCGGTCAATTTTTAACAGCTCTAACTCTATGCCACCACTTTTGGTCATGTAATCATGTTAGTCGAAAACTCAAAATCTTGCATATTTATCTCCACGTTACAAGCACCAACACAAATTTCAAACAACATGATCCCCAACTCTCAACAAAAAAAAAACCATGAAAACATTAAAAATTACCAACATGTTCCTCCCGGATCCAAACATTTAAAGCCAACTTCCTATAAATAAACATAAAATCTCACAATCACATCACTATCTATAACACATCCATAATTTCCAACACAGAAAATCAAACCCAAAACACATAAAATGGGGTGTGTTATAAAACTCATAGATGCAATTTTATTGGTGTTCTTCTTGTTAATGTCAATTGTTATCCCATTGTTTGATGCTCAAAATTGTTTGCCAAAAGAATATTATCCAAATGTTTTGGTAGATCTAAATTCGTGGTATATGAATGACTATGGAGATTATTTGGTGGCTGAAAAGCCACATTTCTTTGTGGGTCTTATTTGGATGGAAGTTGTTGTTCTTTGGCCGCTGTCGATCTTGAATGTTGTGGGTATTATTTCTTCGAAATCTTGGTTTACCACTACCTGCTTGATGTTTGGATCCTCCGTCGCTACCTCGATGGTAATGTTTCTTTTTTACATGCCGTCTCTTTTGTTTAATTTGTGACCATGATAAGTATTGTATACGACAAGTTTATTGTTTATGCGAGTGCAGTCACTCCGATATCGTATGAAAGTCAACCCTCTCTGAAGTTGACTTTTTTTGTTTGAATGTATTTTTTGTGGTATGCTTGCGGATTTCAGTATTGGATTCGTGTTTTCTATACTTATTTTTTGCTGAAATTAGATGAAAGTCTGAAATTGGGGGGAAAAGTGTCCGTTTAGAATTTTTCCTATTGAGTCTAGGACCTGGTTTCTGGGTGTTGGTGGAGGACTGTGGTGGTGGTGGGAAAGGGAGGGGTGGGGGGGAGAGGAGGAGGAGAAATATGTAAACAATCCCCTGATTGGTGAAATATGCCAATCAAGTGACATTCTCTTAATATAATGAATAAATATACAATCTAAAAATTACAATATATAGTCTATTTGATAAGTTACAAAAATAAAAATAAAAGAAAATAATTTTAATATAAAAAGAGATTGACCATTTATTTATGAAAATACCCCTTATGCTTTGCTCGCCAATCATGGAGANCGCTACCTCGATGGTAATGTTTCTTTTTTACATGCCGTCTCTTTTGTTTAATTTGTGACCATGATAAGTATTGTATACGACAAGTTTATTGTTTATGCGAGTGCAGTCACTCCGATATCGTATGAAAGTCAACCCTCTCGATCATAGAAAGGGAAGATAGGAGAAAAGGATGGATTAGAGAAGGAAAATTTGTATCTAATATGAGTTATTTGTTTTTGTGATAGGAGGGGGTGGACTTGGTGGAGGGTTTTTAGTATAATGGAACAATATGTATATATCTCTGTTACGATAAGGAAAGTTGCGTTATGGAAAGTCTTATTTAGATACTCCCTCCGTCCCTTTTTATTCTTTACGTTGGTATCATATACGCGATTTAACAAATAATTAATGTGCAGAATTTTTTTTTTACTTAAAAATGTAAACTTTATTTATTAATACTAATATTTTCACTTTTATTCCAAATTTGACATTGGGAAAGTGAGAAAGATTTAATGTTCCAATGGTAAAGTGTGAGAGATTAATGATCTAATGAATTTGATTGGTTTAAATAATTACTTGGCACGATTTTTGATAGAATATTAAGTAAGATTTTTTATGTTATAATATAAAAGGAAATATTCAAAGTTGTAAAGATTAAATAGAACACTAAAAACGGAAAGCGTAAAGAATAAAAAGGGACGGAAGGAGTACAATCTAGGACGTAGTTTACATGGTTTAGGATAGTTCAATCTCAATGAAAAGAAGGAAAACTAAAGAATTAATTTGGACATCGATGGATGATAGGAGAATGAAAAGATTTTTAATTATTTTTGAGGGTTAAGAAAAAAGGATGGCTTGAAGAAGGGATATGTGTAATGGTTGTGTGGTAGCAGGAGAGGTGGCACTGTAATGGAACTATACGGATAAAAAAAAGACTTTTTAGGGTATGAAATACTAGAACATGGCTAAGAACCATTGAGGTTATTTACGTGATCGCCACACACATTTTGAAGGATCACCAGGTCCCAAAACTCAAACTTAACTAGGATATTACACACCTAATCTTGTATTTGAGATACACCCTCTTGAGAATGAAAACTCTAAACAACGATGGTTTGATTAAACATAGGAAATAATACTTCCTAAGAACTTTTAATCCCATTTAGTTTTCTTTTCTAGGAAACTCAAAATGTTTTCTGATTGAACATAAGAAGTAAAGTTGCCCACGAGAAATTTCATTTACTTAAGGGCTTGGTAATGTCCATTTCCGATGGAGCCAAAGATTCATTTGTTCTTTTGACTGTGGGATGTAATGGATTAAATCAAAATGGCTATTAAAACCTCTTCGCTTCCTTTCCATGAAGTAGAAGATGGTCGTCGCGTTGTCGTCCCGTTATCACTTTTGTTTCAATTGGAAACAACTTCTCTGCCATTGCAGGGGTAAGGTTGTGTACACCCGACCCCCCTTACCCCACTTCTTGCGGGAGCCTCTTTGAGGCAATGGGGTAATGATAATGATAATGAACTTAAGGGCTTGGTAAGCAATTTCCTCAATTTTGTGGGAAGTAGAACTTTCGAGAAAGAGAAACTTCCCCATGATGTTACTAACCAAACAACTCAAGCTTCTTCTGCTTCCTAGAATTTTTTTAATTCCCATGAATTTTGATGTTAATCAAACAACAAATTTTTTTTGGTGATACCTAAATTACGGGAAGTGGAAGAGTATGCAATTGTTTGATTGGCAAAGACTTGGAAAGTTGATATTCCTTCGAAGATCTTAAGATATTTTAGTTTCTAGAAAATGGAGTAAGTTGCTTACATAGGTTAGTGGAGCTTCTCATGAGCAATCCCATTTCCCATGTTCAATCAAACACCATGTTGCACTTCCTAGGGACTAAATCTAGGTGGGGAAAACTATTTCTTATACATAAAGCCATTCATGATATAATATAATAACTAGTATTTGGTTCCGGGCGATGCTCCGGATTAGTATGTGAACAACAATTAATTATTACATTTTTTAATGAAATTATTCTGGATTTTTTTTATGTATACATTAATATTAATTTTGCAAAGATAATGGAGGTGTTTGGTTAAGAGAGGTTTGGCCGTTTGAGGGAAAAAGAGCTTTTTGAGGTGAATTAGAGGTTTGACTTTTTGAAAAATCTAATGGGGAGTGTTTGGTTTTGAGAGGTTTGGAAGAGAGTTTTGGGATAAAAAAACAAATTCTCAAAAAGCTCAATATAGGAGCTTTTTGCAATTAGAGGTTTGAGAAAGTGAATGTAAATTTACTATTTTGTCCAAATGTTGTCTAAAATTACGACACTTAACAACCTTAACATTCTACATTATTTTATTTATCCTATTTACTACTCGTTACTTGTTGTAATAAAATTTATATTAGTACATTGAAGTACTTAATTAAAACTATTGCAATCATGCTTGTAATATCATTACTAACATTTCTTTATTTGCATATCAATAATTTATGTATTTAAAATTTTAAATTAAGAATAATTTTTTAAAAAAATTGTTTTATTTTTTAAAAGGGAAAATAAATTTTTTATTATTTATTCTATGCTTATTTGAAAAATAAAGAGAAGATAATTAACATAATAAACTATTGTCTAATACTAATAAGAAGCAAAGTATCAAACAACAAAGTATCCTTAATGGTCATTTCACATATTAAACAAGTAACAACTAATTTACCAAACACTTTCACACAAACAGCTAATTCAACCGGCTAGTCAAACCAGCTAATACAAACCGCTAACAGCTAGTCAAACCAGGTATCAGCTAACAACTAACAGCCTAGGATGCTCGGACTCGCGCCACCACCTATTCGTACTGGTGTCGACACGACACGACGCGGGTGCGGACACGGAATCCGGACTGGACTCGCCATGAAAAAAATGGACTCGTCTTTTAGGGTTTTGAAAACCCAAATCTAAAAATAGAGGCATCAAATCACGGATATGGAGACCGAGAATTTAGGGCTTTTGGTCGCCTGAGAAACGCGAGCTCACTAGGAATATTCTCCGGCGGGATTTGATGCTTTTGGATGCTGCAGACAGACTCCACGGAAGCAACCTCCATGGAAGTCGACAAGTTTGTTGTGAAAAAAAATAATAACTTTAGGTTTTCTTATTTTTTGTTTTTAAAATAAGTAAAAGTTGGTGTAGGACAGGTGAGGAACAGCTGTCTATAATAACATTGGATAAGTGAACAGTAGTGGTCCACTGGTTCCGTCAAAAAAAAGGAGTACACATGTGTGGTAACTGCCTAACTGGTATACTACAACTGTCAATATCTTTTTAGGTAAATTTTTATTTGTTTTATTAATTTTTGATATTCTTTTTGACTTCTAAACCAACTTTCTTATTTTGGGAAAAGAGATGACAAGGATTTTTTTTTTTTATTTAATACTCCGTAGTTTCAATTTTCAAAATATTTACTTTTAATTTTTTTTATAATCACAAAAAAATAATTCCATTTATTATATTTATACGGTCATTAATATTAAATATTTAAATGCTTGCCGTGTCCCCGAGTCCGTATCTGAATTTTGGACACTTCTAAAACGTGTCCCCGAGTCCTTGATTTTAGAAAAGCTCAGGTCCGACCCTTGGACCCGTACCCGAGTTGGACACCCGTATCCGAGTCCGAGCATCCTAGCTAACAGCTCCTAACCAAATAGGGCAAACATATAAAAGGTCATAGCTCAATTGGATAATGATCTAATGTTGAAACTTGAGGTCACAGGTTCGAAACATATGCAAACCATATTTCTCATTTTTTTAAAGAAAGTAGATTGATAGCATGGATTTATGGATTGAGGGAGCCATGTGGTATGTAGACGTTTGTAGAAACGCCTTTTAATAGATAGTATAGATGGGTATGCAACCACTTAGTTCAATTTTATTCAACGCTGTGTATTCTTGTTTCCTATTAGTTAGACTGCTAGATCAAAATGTTTTAGGCCAAAGTACAACTTGTCATTTATTCTTCGCTGCTGCGTCACACACTGGATTTGATTAGCATAATCCATGTGTTGGCGTCAAGTTCATTTGTTCAAGTGGGTGATAAAGCGCCTGCTTAGTGGGAAGAAGTTCTTGTTCTTTGGCCTCTGCCAATTGTGAACACTGTGGGTATTATTTTTTCGAAATCTTGGTTTCGCACTACCTGCTTGATTTATAAATCCTCCATTGCCACCTCTATAGTATATGCTAATCTTTCATTATTATTTTTGTTGTTGTTTATTTTGTTTTTTGTCAATCTTAGTCATGTTCTGCATAATGTTGCCATTTTAGTTCAACTTTTAGGGATGATAGGTGTTGTATACAATGGGTTTATTATAAAGAGTTTAGTTATCTCGGAATCATATAAAAGTCATCCCTTTGTGAAGTTGACTTTTATGTGATTTGGGGTGACTATGCCAGCATCACATACAAGTTTTTTTCCCTTTTGGAGGTATTATTTATCGTGTGGTTGTGCATTTGGTATTCGTATCAGGTCTTACACTGATTTTATGCTGAAAAAAGATAAAAAGTCAGAAAATGGTAAGAATTGATTGAAAAAATGGCTTTCCTCTTTAAGGATCCTTTCTTATGAGGGATTGAAGTCTTGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAACTATTTACATGAATTGCTAAAACAGGAAGGAAAAACTGTCATGGAATTGCAAAAATTGGAGCTCGGTCATTGAAAAAGAAGATAGGAGAAACGGATGGCATAAAGATGGGAAGTTTGTGTATTTGGTTGTGTTATAGCAGCAGTGTTAGTGGTCTAATGGAACTATACCTATTTATTTCCTTAACTGAAAGATTGGAAAACTGTAGAATTGACGAAGATGTAGCTCGGTCATTAATGGGATGATAGGAGAATAGATGGATTTTTAATATTTTTGAGGGTCAAAGATGGCTTGAAGAAAGGGAACGTGTTGTGTGATACAGGAGATAAGAAGCTTCCACACTCGAACACAACAAAGATATTACACATTATCTTGTACTTGAGATATACCTGTTTGGGAATGGAAACTCTAAATAATGGTCGTTTGGTTGAACATAAGAAGTAATATTTCTGAGGATTTTTTTCGGGTCCCATGTAGTTTTATTTTCTACGAATGCAAAATGATGTTTGGTTGATCATTGAAAGTAAAACACCCCATGACAAGTTTCACTTATCTACTAGGTGTAATTAAGCAATTTCCACTATTTTGTGGGAAGTAGAACTTTCTAGAAAGAAGTTTCCACTATTTTGCCAACCAAACCACTCACTTTCTTCCACTTCCTAGGAATTTTACTTCCCATGTATTTTGATGTTGAGCAAACAAACACTACGTGTTTGGTGATATCGTAATGGAAGATTATGGAATTGTTTGGTTTAAAAAATTACAGGATATTGTATTCCTAGGAAGATTGTAGGAAGTTCTTTGCTTACTTTGTGCCCCTAGGCAAGTGAAACTTCCCATGGGAAATCACACTTCCTATGTTCAACCAAACAACATTTTGCATTTCCTAGGAAATAGATTTACATGGGAAAAACTACTTGTTTGGGAATTTCATTATAAGAACTCATTCTTATTATTTATACTCCAACCGGCTTTTTTTAATGAATCATTGGCCTTTATGAGTGTTTTTTGTTTTTGAAATGCATCACTTATTTGATACTTTCTACTACTCCCTCCGTCCCAAAATATAGTGCATGTTTCTATTTTGGGTTGTCCCAAATGTGATATTTGACTGTTAATGAAGATTTCTGAACCTTGATTACAATTGTATAATCTTGTAGGCTGCAATACTCTCCGAACTCTTTAATTCTGGCAAAGCATCAGACAAGTTGAAGATGGTGTACTTACCATTCATGGGTTTGGCTATCTTGGCAATCCTGCGTGGTATGCTCCCATCATCATGCAAGACTAAAGCTGTCAGCAAAAGTGCAGTGGCAGGTAGGAAGAAGAGGGCTTGAAGTTACTAACTGGCATCACAAGTAGAATTTTTCTTATCAACTGTCTGTTGGATGATATTGTTCCTATGGCCACAATTACAGAAACTCTTGTTTTTGAGCCCTGATCACACAATTCACAATGTACTTGCCAAAGATGAGACTTCTGTATTTCATTAATTCTTTCAATTACTTTTTCTGTGCTGTCTTTGCCATTTTTCTTGGATAAACCCATAACCGCAACAGGTAAATGGCATGTAAATCAGTTCTTTTTCCGACCAATTTTGAACTTGATTGTGAAGTTGTGATAAAAGGACTGATGCAATGACTAAAAACTAGTACTTCCTCCATTTTTTTATAATTGCACCATCTTGGTTTTAGCACTATTCACATATTCTTATATAGTTATATTTTGTGATTTATATGTAAGGAAAAATATATTCAAGTGGGATCTTGTTAGATTCGTCTCCAAATATACTTTAAAATTATCAAATTTTTATATTTTTTTAAAATGTATAATGAGAGATACTAGTGGTTAAAATAGTGCATTGGCAAGCGTGAAATCCAAGATGGTGCAATTAAAAAAAAATGGAG

mRNA sequence

TCGAGTTCGGGTCATTTTTCGGTCGGGTCAGTTGATTCAATTCTGTTATCGGTTATATTTCGATCGGGTGCCAGGTTCGGGTCTAAGTCGTGCATTAACGGGTCAAAATCGATCGTCGGTTTTAACGGGTTGGATACGATCAGGTTACGGGTTTTCTATTTTAACAACATTTCTGATCTCGAGTCGAGTCCAGGTCTTTAAAACACATGTTAGTTCAGGTCGATTTCTCGAACCGGTCAATTTTTAACAGCTCTAACTCTATGCCACCACTTTTGGTCATGTAATCATGTTAGTCGAAAACTCAAAATCTTGCATATTTATCTCCACGTTACAAGCACCAACACAAATTTCAAACAACATGATCCCCAACTCTCAACAAAAAAAAAACCATGAAAACATTAAAAATTACCAACATGTTCCTCCCGGATCCAAACATTTAAAGCCAACTTCCTATAAATAAACATAAAATCTCACAATCACATCACTATCTATAACACATCCATAATTTCCAACACAGAAAATCAAACCCAAAACACATAAAATGGGGTGTGTTATAAAACTCATAGATGCAATTTTATTGGTGTTCTTCTTGTTAATGTCAATTGTTATCCCATTGTTTGATGCTCAAAATTGTTTGCCAAAAGAATATTATCCAAATGTTTTGGTAGATCTAAATTCGTGGTATATGAATGACTATGGAGATTATTTGGTGGCTGAAAAGCCACATTTCTTTGTGGGTCTTATTTGGATGGAAGTTGTTGTTCTTTGGCCGCTGTCGATCTTGAATGTTGTGGGTATTATTTCTTCGAAATCTTGGTTTACCACTACCTGCTTGATGTTTGGATCCTCCGTCGCTACCTCGATGGCTGCAATACTCTCCGAACTCTTTAATTCTGGCAAAGCATCAGACAAGTTGAAGATGGTGTACTTACCATTCATGGGTTTGGCTATCTTGGCAATCCTGCGTGGTATGCTCCCATCATCATGCAAGACTAAAGCTGTCAGCAAAAGTGCAGTGGCAGGTAGGAAGAAGAGGGCTTGAAGTTACTAACTGGCATCACAAGTAGAATTTTTCTTATCAACTGTCTGTTGGATGATATTGTTCCTATGGCCACAATTACAGAAACTCTTGTTTTTGAGCCCTGATCACACAATTCACAATGTACTTGCCAAAGATGAGACTTCTGTATTTCATTAATTCTTTCAATTACTTTTTCTGTGCTGTCTTTGCCATTTTTCTTGGATAAACCCATAACCGCAACAGGTAAATGGCATGTAAATCAGTTCTTTTTCCGACCAATTTTGAACTTGATTGTGAAGTTGTGATAAAAGGACTGATGCAATGACTAAAAACTAGTACTTCCTCCATTTTTTTATAATTGCACCATCTTGGTTTTAGCACTATTCACATATTCTTATATAGTTATATTTTGTGATTTATATGTAAGGAAAAATATATTCAAGTGGGATCTTGTTAGATTCGTCTCCAAATATACTTTAAAATTATCAAATTTTTATATTTTTTTAAAATGTATAATGAGAGATACTAGTGGTTAAAATAGTGCATTGGCAAGCGTGAAATCCAAGATGGTGCAATTAAAAAAAAATGGAG

Coding sequence (CDS)

ATGGGGTGTGTTATAAAACTCATAGATGCAATTTTATTGGTGTTCTTCTTGTTAATGTCAATTGTTATCCCATTGTTTGATGCTCAAAATTGTTTGCCAAAAGAATATTATCCAAATGTTTTGGTAGATCTAAATTCGTGGTATATGAATGACTATGGAGATTATTTGGTGGCTGAAAAGCCACATTTCTTTGTGGGTCTTATTTGGATGGAAGTTGTTGTTCTTTGGCCGCTGTCGATCTTGAATGTTGTGGGTATTATTTCTTCGAAATCTTGGTTTACCACTACCTGCTTGATGTTTGGATCCTCCGTCGCTACCTCGATGGCTGCAATACTCTCCGAACTCTTTAATTCTGGCAAAGCATCAGACAAGTTGAAGATGGTGTACTTACCATTCATGGGTTTGGCTATCTTGGCAATCCTGCGTGGTATGCTCCCATCATCATGCAAGACTAAAGCTGTCAGCAAAAGTGCAGTGGCAGGTAGGAAGAAGAGGGCTTGA

Protein sequence

MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEKPHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGKASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo04272	Spo04272	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo04272.1	Spo04272.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04272.1.utr5p.1	Spo04272.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04272.1.CDS.2	Spo04272.1.CDS.2	CDS
Spo04272.1.CDS.1	Spo04272.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04272.1.utr3p.1	Spo04272.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04272.1.exon.2	Spo04272.1.exon.2	exon
Spo04272.1.exon.1	Spo04272.1.exon.1	exon

Homology

[Close]

BLAST of Spo04272.1 vs. NCBI nr
Match: gi|902152673|gb|KNA05625.1| (hypothetical protein SOVF_188630 [Spinacia oleracea])

HSP 1 Score: 317.0 bits (811), Expect = 2.000e-83
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK
Sbjct: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK
Sbjct: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 167
           ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA
Sbjct: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 166

[Close]

BLAST of Spo04272.1 vs. NCBI nr
Match: gi|731356355|ref|XP_010689634.1| (PREDICTED: transmembrane protein 97 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 258.1 bits (658), Expect = 1.100e-65
Identity = 129/166 (77.71%), Postives = 149/166 (89.76%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MGCV+K++DA+LL+FFL+MSIVIPLFDAQ CLP+E+YP  LVDLNSWY  +YGDYLV EK
Sbjct: 1   MGCVVKVLDAVLLLFFLIMSIVIPLFDAQCCLPQEFYPKALVDLNSWYSREYGDYLVDEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHFFVGL+WME++VLWPLSI+N+VG+IS KSWFTTTCL++GSSV TSMAAILSEL NSGK
Sbjct: 61  PHFFVGLVWMELLVLWPLSIVNLVGLISGKSWFTTTCLIYGSSVTTSMAAILSELVNSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 167
           ASDKLKMVY PF+GLA+LA LRGMLPSS KT A+ KSA   RKKRA
Sbjct: 121 ASDKLKMVYYPFLGLAMLATLRGMLPSSFKTAAIGKSARVARKKRA 166

[Close]

BLAST of Spo04272.1 vs. NCBI nr
Match: gi|731356357|ref|XP_010689635.1| (PREDICTED: uncharacterized protein LOC104903317 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 207.6 bits (527), Expect = 1.700e-50
Identity = 103/132 (78.03%), Postives = 116/132 (87.88%), Query Frame = 1


		  
Query: 35  EYYPNVLVDLNSWYMNDYGDYLVAEKPHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFT 94
           E+YP  LVDLNSWY  +YGDYLV EKPHFFVGL+WME++VLWPLSI+N+VG+IS KSWFT
Sbjct: 9   EFYPKALVDLNSWYSREYGDYLVDEKPHFFVGLVWMELLVLWPLSIVNLVGLISGKSWFT 68

Query: 95  TTCLMFGSSVATSMAAILSELFNSGKASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAV 154
           TTCL++GSSV TSMAAILSEL NSGKASDKLKMVY PF+GLA+LA LRGMLPSS KT A+
Sbjct: 69  TTCLIYGSSVTTSMAAILSELVNSGKASDKLKMVYYPFLGLAMLATLRGMLPSSFKTAAI 128

Query: 155 SKSAVAGRKKRA 167
            KSA   RKKRA
Sbjct: 129 GKSARVARKKRA 140

[Close]

BLAST of Spo04272.1 vs. NCBI nr
Match: gi|976919000|gb|KVI04146.1| (Transmembrane protein 6/97 [Cynara cardunculus var. scolymus])

HSP 1 Score: 201.1 bits (510), Expect = 1.600e-48
Identity = 100/166 (60.24%), Postives = 129/166 (77.71%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MG ++KLIDAIL + FL+++IV PLFDAQ CL    +P+VLV LN+WY ++YGDYLV+EK
Sbjct: 1   MGAIMKLIDAILFIVFLVIAIVAPLFDAQTCLSSNIFPDVLVHLNTWYTHEYGDYLVSEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHFFVGL+W+E++  WPLSI ++ GI++ KSW  TTCLM+G S  T+M AILSEL  SGK
Sbjct: 61  PHFFVGLVWLELLFAWPLSIASLYGIVAGKSWLRTTCLMYGVSTLTAMVAILSELVGSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 167
           AS+KL  +Y PFMG ++LAILRG+LP S K+KA+       RKKRA
Sbjct: 121 ASEKLLKLYFPFMGFSVLAILRGLLPHSQKSKAIGTRPALIRKKRA 166

[Close]

BLAST of Spo04272.1 vs. NCBI nr
Match: gi|702244222|ref|XP_010051049.1| (PREDICTED: transmembrane protein 97-like [Eucalyptus grandis])

HSP 1 Score: 200.3 bits (508), Expect = 2.700e-48
Identity = 102/167 (61.08%), Postives = 130/167 (77.84%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MG ++KL+DA+L +FFLLM++ +PLFDAQ CLP+  +P+ L+DL   Y    GDYLVAEK
Sbjct: 1   MGALVKLVDAVLFLFFLLMAVCVPLFDAQACLPESLFPDALLDLKRGYSGRVGDYLVAEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           P FFVGL+W+E++ LWPLSILN+ GI++++ WF TTCL++G SVATSM AILSEL  SGK
Sbjct: 61  PLFFVGLVWLEILFLWPLSILNLYGILAARPWFRTTCLIYGVSVATSMVAILSELTGSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCK-TKAVSKSAVAGRKKRA 167
           ASD L MVY PF+GL++LA LRG+LP S K T  +SK     RKKRA
Sbjct: 121 ASDDLLMVYFPFLGLSLLAFLRGLLPCSTKTTSTISKKPALARKKRA 167

[Close]

BLAST of Spo04272.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEE5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188630 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.400e-83
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK
Sbjct: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK
Sbjct: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 167
           ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA
Sbjct: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 166

[Close]

BLAST of Spo04272.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLM6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g208350 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 7.500e-66
Identity = 129/166 (77.71%), Postives = 149/166 (89.76%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MGCV+K++DA+LL+FFL+MSIVIPLFDAQ CLP+E+YP  LVDLNSWY  +YGDYLV EK
Sbjct: 1   MGCVVKVLDAVLLLFFLIMSIVIPLFDAQCCLPQEFYPKALVDLNSWYSREYGDYLVDEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHFFVGL+WME++VLWPLSI+N+VG+IS KSWFTTTCL++GSSV TSMAAILSEL NSGK
Sbjct: 61  PHFFVGLVWMELLVLWPLSIVNLVGLISGKSWFTTTCLIYGSSVTTSMAAILSELVNSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 167
           ASDKLKMVY PF+GLA+LA LRGMLPSS KT A+ KSA   RKKRA
Sbjct: 121 ASDKLKMVYYPFLGLAMLATLRGMLPSSFKTAAIGKSARVARKKRA 166

[Close]

BLAST of Spo04272.1 vs. UniProtKB/TrEMBL
Match: A0A103Y7W2_CYNCS (Transmembrane protein 6/97 OS=Cynara cardunculus var. scolymus GN=Ccrd_017536 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.100e-48
Identity = 100/166 (60.24%), Postives = 129/166 (77.71%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MG ++KLIDAIL + FL+++IV PLFDAQ CL    +P+VLV LN+WY ++YGDYLV+EK
Sbjct: 1   MGAIMKLIDAILFIVFLVIAIVAPLFDAQTCLSSNIFPDVLVHLNTWYTHEYGDYLVSEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHFFVGL+W+E++  WPLSI ++ GI++ KSW  TTCLM+G S  T+M AILSEL  SGK
Sbjct: 61  PHFFVGLVWLELLFAWPLSIASLYGIVAGKSWLRTTCLMYGVSTLTAMVAILSELVGSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 167
           AS+KL  +Y PFMG ++LAILRG+LP S K+KA+       RKKRA
Sbjct: 121 ASEKLLKLYFPFMGFSVLAILRGLLPHSQKSKAIGTRPALIRKKRA 166

[Close]

BLAST of Spo04272.1 vs. UniProtKB/TrEMBL
Match: A0A059DG37_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01714 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.900e-48
Identity = 102/167 (61.08%), Postives = 130/167 (77.84%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MG ++KL+DA+L +FFLLM++ +PLFDAQ CLP+  +P+ L+DL   Y    GDYLVAEK
Sbjct: 1   MGALVKLVDAVLFLFFLLMAVCVPLFDAQACLPESLFPDALLDLKRGYSGRVGDYLVAEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           P FFVGL+W+E++ LWPLSILN+ GI++++ WF TTCL++G SVATSM AILSEL  SGK
Sbjct: 61  PLFFVGLVWLEILFLWPLSILNLYGILAARPWFRTTCLIYGVSVATSMVAILSELTGSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCK-TKAVSKSAVAGRKKRA 167
           ASD L MVY PF+GL++LA LRG+LP S K T  +SK     RKKRA
Sbjct: 121 ASDDLLMVYFPFLGLSLLAFLRGLLPCSTKTTSTISKKPALARKKRA 167

[Close]

BLAST of Spo04272.1 vs. UniProtKB/TrEMBL
Match: M5WRG5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012485mg PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.100e-48
Identity = 98/167 (58.68%), Postives = 126/167 (75.45%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MG ++KL+DA L VFF ++++  PL DAQ CLP+  +PNVLV L SWY   YGDYLV +K
Sbjct: 1   MGALVKLVDATLFVFFFVIALAAPLIDAQTCLPQSLFPNVLVQLKSWYARQYGDYLVTQK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHFFVG++W+E++  WPLSI N+ GI+++KSWF TTCL++G SV TSM  ILSEL  SGK
Sbjct: 61  PHFFVGIVWLELLFQWPLSIANLYGILAAKSWFNTTCLIYGVSVFTSMVTILSELVQSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGML-PSSCKTKAVSKSAVAGRKKRA 167
           ASDKL  +Y PF+GL +LAILRG+L PSS  +  + K    GRKK+A
Sbjct: 121 ASDKLLYMYFPFLGLGVLAILRGLLPPSSTTSSGIGKRPTLGRKKKA 167

[Close]

BLAST of Spo04272.1 vs. TAIR (Arabidopsis)
Match: AT2G32380.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 184.5 bits (467), Expect = 5.300e-47
Identity = 92/168 (54.76%), Postives = 127/168 (75.60%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MG   KLIDA+L ++F LM+++ PL D Q  LP + +P  +VDLN WY++++GDYLV EK
Sbjct: 1   MGAFCKLIDAVLFLYFALMAVIAPLIDGQTSLPGDIFPAFIVDLNRWYIDEFGDYLVKEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHF VGL+W E+++LWPLSI+NV  I++ KSWF TT +++G+SV TSMAAIL E+  SGK
Sbjct: 61  PHFLVGLVWHELLLLWPLSIVNVYAILAGKSWFGTTSMVYGASVVTSMAAILGEMIGSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAV--SKSAVAGRKKRA 167
           AS+KL M+Y+PFMG+ ILA+LRG+L  S K+      + A+  R+KRA
Sbjct: 121 ASEKLLMMYVPFMGVGILALLRGLLSQSNKSGGAVGKRPAILARRKRA 168

[Close]

BLAST of Spo04272.1 vs. TAIR (Arabidopsis)
Match: AT1G05210.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 172.2 bits (435), Expect = 2.700e-43
Identity = 91/168 (54.17%), Postives = 119/168 (70.83%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MG + KLID  L V+F+ M+I+ PL D Q  LP   YP  L DL S Y+ D+GDYL+ EK
Sbjct: 1   MGALGKLIDVALFVYFVSMAIIAPLIDGQTSLPSGIYPAFLTDLKSKYIADFGDYLLMEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           PHF VGL+W E++ LWPLSI NV  I++ KSWF TTCL++G+S+ TSMAAIL ++  SGK
Sbjct: 61  PHFLVGLVWHELLFLWPLSIANVYAILAGKSWFGTTCLLYGASLVTSMAAILGDMIGSGK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVS--KSAVAGRKKRA 167
           ASD+L M+Y+PFMG  ILA+LRG++  S K    S  +S +  R+K A
Sbjct: 121 ASDRLLMMYVPFMGFGILAVLRGLVYRSTKNTGSSGKRSTIMPRRKLA 168

[Close]

BLAST of Spo04272.1 vs. TAIR (Arabidopsis)
Match: AT1G05220.1 (Transmembrane protein 97, predicted)

HSP 1 Score: 148.3 bits (373), Expect = 4.200e-36
Identity = 84/166 (50.60%), Postives = 115/166 (69.28%), Query Frame = 1


		  
Query: 1   MGCVIKLIDAILLVFFLLMSIVIPLFDAQNCLPKEYYPNVLVDLNSWYMNDYGDYLVAEK 60
           MG + KLI+  L  FF LM+I +PL + Q   P   YP +L DL  WY +++ DYL  EK
Sbjct: 1   MGALGKLINISLFFFFALMAINVPLLNGQILFPG-IYPKLLTDLKDWYSSEFNDYLFIEK 60

Query: 61  PHFFVGLIWMEVVVLWPLSILNVVGIISSKSWFTTTCLMFGSSVATSMAAILSELFNSGK 120
           P FFVGL+W E++ L PLSI+N+  I++SKSWF TT L++G+S  TSMAAIL ++  S K
Sbjct: 61  PLFFVGLVWHEIIFLLPLSIVNIYAILTSKSWFGTTSLLYGASFLTSMAAILGDMIGSEK 120

Query: 121 ASDKLKMVYLPFMGLAILAILRGMLPSSCKTKAVSKSAVAGRKKRA 167
            ++KL + YLPF+GLAILA+LRG++  +C TK   +S V  R+K A
Sbjct: 121 VTNKLLLAYLPFVGLAILAMLRGLV--TCSTK---RSTVLARRKLA 160

The following BLAST results are available for this feature:

BLAST of Spo04272.1 vs. NCBI nr
BLAST of Spo04272.1 vs. UniProtKB/TrEMBL
BLAST of Spo04272.1 vs. ExPASy Swiss-Prot
BLAST of Spo04272.1 vs. TAIR (Arabidopsis)

BLAST of Spo04272.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902152673\|gb\|KNA05625.1\|	2.0e-83	100.	hypothetical protein SOVF_1886...	[more]
gi\|731356355\|ref\|XP_010689634.1\|	1.1e-65	77.7	PREDICTED: transmembrane prote...	[more]
gi\|731356357\|ref\|XP_010689635.1\|	1.7e-50	78.0	PREDICTED: uncharacterized pro...	[more]
gi\|976919000\|gb\|KVI04146.1\|	1.6e-48	60.2	Transmembrane protein 6/97 [Cy...	[more]
gi\|702244222\|ref\|XP_010051049.1\|	2.7e-48	61.0	PREDICTED: transmembrane prote...	[more]

BLAST of Spo04272.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QEE5_SPIOL	1.4e-83	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BLM6_BETVU	7.5e-66	77.7	Uncharacterized protein OS=Bet...	[more]
A0A103Y7W2_CYNCS	1.1e-48	60.2	Transmembrane protein 6/97 OS=...	[more]
A0A059DG37_EUCGR	1.9e-48	61.0	Uncharacterized protein OS=Euc...	[more]
M5WRG5_PRUPE	4.1e-48	58.6	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo04272.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo04272.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G32380.1	5.3e-47	54.7	Transmembrane protein 97, pred...	[more]
AT1G05210.1	2.7e-43	54.1	Transmembrane protein 97, pred...	[more]
AT1G05220.1	4.2e-36	50.6	Transmembrane protein 97, pred...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016964	Transmembrane protein 97	PIR	PIRSF031032	TMP_97	coord: 1..158 score: 1.1
None	No IPR available	PANTHER	PTHR31204	FAMILY NOT NAMED	coord: 1..166 score: 1.4
None	No IPR available	PFAM	PF10914	DUF2781	coord: 9..143 score: 3.2