Spo04483.1 (mRNA) | SpinachBase

Overview


Name	Spo04483.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	RNA polymerase III subunit-like protein
Location	chr3 : 3394459 .. 3406197 (-)
Sequence length	1997

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCAAAAGCTCGAAAAACAACACTGACAGTTAAAACACTGAAAGAACCACCGTAATCGATGGCGGCGCTGACACCGTACGGCATCAAACTCGCCGTCCACATCATCACTACCGACTTCGGAAACCTCGTCGCTGTAAACTATCTCTTTTTCCCTCTCCTCTCTATTCTTCAATTGACAATTTAATTATTTTATTTCTTATACAATTAATTGCAATTATTTTTTGGTGAATTTTAATTTGAGCAGAAAATATGCGAATGTATACTCAGAAGAGGAACCCAAAGTAGAGCGTTGATTTCTCGATTCACTGAACTCCCTCAAGACAAAGTGAAGAAATGTTTATGGGTTTTAATTCAGCATAATTGTGTTCAAGCTTTCGGCCTTGAACAAGAAGGTTTTCCTTTTTTTTTTAATTTTTATTTATTAATTTGATGCTTATAATGCTTAGTTAATTTATGATTGTTGTTTTTTATGCTATACATTTGTTGTTTATTGTAATTGTTGGTTTAGAATTTTCTGGAAAATAGCTTAATTGTCGAGTTTCTATTATGATCATGTGTTATTAGTAGGGCTGAAGTAACATTGTTGCTTTCGTTATTAATTTACAGTTTTTGAAGTATGCTAAGGAATTTGTTTCGTCGAGGTGTTGATTAGTGGTTATCATGATTCCTATGTTTATATACATTGTAAAGGTTTTGGTGGATTTTAGGGTGAAGTCATTGTTTGTTTCGTGTTGTTGTGAACAAACTTATAGTATGATGATTTGTTATCAGTAGATCTGAAATAACATTGTTTTTTTCGTTATTAACCATGCCGGAGTTTAGAATGAACTTTTTCTATCAAATAGGGAGTATTTGGCTTCCAAAGAGAGTTCTTTAATATTGTTGAATCATCTATCAGAGGAATATATGTACACAGCCATACGGTTCTTTTGAATAAATTTGAAGTGATTTGAACTTTTGAAGTCGTGATATGAAGTCTAAGTGTAAAGGTGGGCTTAAGAACTCTTATGACAATGATCATGATGGAATTAATGCACACAGCAGCCACAAGATTCTTCTTCAATTGGAGTTGTGGTTATTTGCCTTTCTAGTGTTATACTATTTCCATTATTTGATGTTGTCAATAATCATATTCTATATTACTACTTAGATGATAACAACTATTGAATTAATGTTCCTAGGGGGTGCCAGAGATACTACAGTGGTAGTCACACAGTACATGGCATTGTTTGATAACATCATTCAGCGCTTGAGGTTCCCGAAGTTCATGGTTACAGTGTCAATGGAGAAGGATAAAAAAGTTGGTGACTTAGTACTTTATGTTTCTCTTTTACTAACTTCTTGCCGTGATTGTGGAACTTGTTGGCCATTTCTCATGTCGTTACCAATTATGCTAGGGTGAGGAGATTCTTGAAGGGTTGCTGCAGCATGGCAGACTCACTCTCACGCAAATTCTGGATAGAGCACGGGCCCGTTCAAGTGTAGGCAAGTTATAAGTGGTTTTTAATTTGTTATGGTTGATTTTTATATGAAATATTAGAAATTGATGTGAGGTTCTTTTGTTTTTTATAATTTGTTTTATTTTTATTATGCATGTCGATAACTGCAAAAGGATAGGACCTTGGAAATAAAGAATGGATTTCTGTCCAGGCTCAAAAATCAGATTCCTTCTTAAGGCTCTCTTTTAACAACAAAATGACCTCATTATTGGCCTTACCTTGATCTGGTAGATTGGGACAACATTAAAGAGACGACTCTGATCTCTTTCACCCATGCTCCGAAAATCACACTGTTCTTAGGTTCATCACAAAATGAACTTCCTTCTAACTGTATTGGGAAGTCCCACAAGAAGTTCATCTTTCCCTTCCAAGTTAATCTACTTTTATGTATTGCCAAGTAAGATGATGTGCTTCTGGGACAAAGAAAATCTTTCCAAAACATTTAGTACTGAGTTTTCTCCCCCCTTTTGCAATGAACTGGCCTAATGTGGAGGGTAGTGTATGTATTGCATTATTAATCTGTTAGGAGTAGCTTGAAGAAGAAGGAAGAGTGTTACTTGGAGGAGAGACAGAGAAAAGAGAATCAGATCTTCTATGAATAGAGCAGAGAGATGAGGATGAAATCTATGGAGAGGTTCCTTTAGTTTTATTTTGTATTTGGGGAACCAGCCTCTTGAACTCTTGAAGCTTATCATTCCATTGTTACTGTTTTCCAGAATCATCAATCAAAATCGCCTTCTTCTTCTATCAATTTATGTTCTAAATATGCTGAAGTAGGACCCCCCGTCAATAAGAAGGAAGTTCAGTTGTCAATTGTTAGACCACAGGCCTTCATTGTGAAAGGGGATTGTTGAAGAGTCTTTATGCCCGCTATAGCAAGAGTACCCGGGAAAGTCTGTGGAAAAGACTTCCTGAGTCTGATATTACTATTATAGTAATATCAGGTGCTGTTGTTGCCAACGCTTAGCCCTCCAAACTGTACCAAAAGGAAGTTGCTGATGGAATCTGGTCTGTGAAATTTAGTGCATGTTAGTTTTGCATAATTAGGAAATATTTATTTGATCTGTCTTCTACATTGTTTATATTTTTACCCTAGTCTTCAAATTTCAACAAGTGACCTGGTAAACTACATGCTGCCAATCATTAAAGAATTTGGCTTGAGTATGGAGTAGTATCAAAATTAGAAAATTAGGCAATGTTTTCATGTTTTGTTATGAATTCAAACAAGCTTCCAAGCAAACAAGATGCTGTTCTTGACTAAGACATTTTTTTTAGTTCTGCTGGTTGTACACCTGTGCTTTGTAATGCCATAACATTGGCAACATAATCCCTGAGTGGTAAAAGAACATCCAAAAATCGTGATCGCACTCTAAGCAAATCTAATATTGATGTTAGTATCCGGAATTAATATGACGATATCAAGTTTGTTGGCTATATTTTTGTCTTTGCCATTCATAATTTCTGTGATGATTGTAGGCCACCTAACAAAGACTCGTTTTCATTGTTTATCTGAAATAGATGGCAGCATCTTGTGTTCATGGGGTCCTTTTAACTTGCTCTCGTTATCTGGTTTTATTTCCTTCTGAAGCTGCGAAGTTATAATTTGTGATAAAATCTGGATGCAGAGGACACATATTTTTTTCCCCCGATTCTGATTGGGCACCTTATAAGATCTTGTTGAGAGGAATCCAAGGATATATTTGGCTATGAGTTGATAAATTAACACATGTATGTAAGAGTCATGTTATATTGCCTATTTAACTTTTTTAGAGCTTGCCACTGACTAGACACCTTTAGCTTCTTAGATTTAGTTTGTGATAACCTTGTGGACGATTATTTCTCTATGCATCTATGACCACTGAGTCACTGACCACAGGTCCACTGAGTTGAATTCTAGTACTTGGGTATATTATTGTAATTGTAAGTTAGTGATTGGGATATCATTTCTTCTGTTTTTTTTTTCCGGCCAGGAAATCAAGATGCTCACCGAGAAAGCTTCAGAAAACTTGTTCGCGGCCGTTTTGTTGAACGGTGCCCTGCTCCAGAGCCATTAATATCTTTACCAACTGAGGGAGAAGGTCCTGCTAAGAAAGGAGGGGGGAGAAATAAGGTAGCATCCTCAGGGAGCATTTTTGCTGCAGTTGTTTTCTCCTTTTCATTCTCTTATGCTGTTTTTGGTTATTTTATTTTTAGTTATGTTCCTTTCAATTCAAAAGTGCCATGGCTCTGTCATACTTTATATAAATTCCGAGTATGGAAGTTTATTATGATTAAACAAGTAGGATAGTGTCGTTCAGTTCATATTACAATAATAAATTAGCAACTTATAGTTGCTTGAAGATTATTGTTTAATGTTAAAAAATTATTTATACCATATTGATTTGGCACGTTTTCCAATGCATATCTTTGATTATCTAAAAGCAAAAATCATAAAAAGCTGATATTATGAAAATATATTGAGACAAATTAGCAAGATCCACATGGCTATGTAGAACCAAAGGTGGTCAAAGGTGAGATGTGAATAGTGCAAAAGTTGATTTGGTACACTAAGAAAACAGAGGAAGTACTGAAGAGCATGTAAGGTTTAGACAACTATTGTTATTCTTTGAATGCTCTATTGCTGAATCTTGTAGAAGTTTGGAATATATCTCAAATCTGTATAGGAACTAAAAAGTTCTATCTAATCCTCTGGGGGATTGGACTCCGCCACAGGCTTTGGTTCTTTCTCTCACATAATTTCTCCCGTTTTTTACTTAAGTCTTTATTTTCGCTTTACTTTACAAGTATAAGAAACATAATTGGTTCTAAGATCCTCTTTTATGCAGTCCCATAAATGTGGCAACTTTTTCTTATATTAGCTATTCATTGAGAACGTTTTCATGCTTTGGCACTAAATTGCATAGCTACCTAATGTGTTTCCTCCCTAATAAGATGACGATTTCCTATGCAGGGGATATGTTATAGAATCTTCTTATGATAGTGCAGATTGTATGAATTTGATTATTTCTTCTGCTTTTTTTGCAGGATTTTTTTGAATAGTGACCTTGATTGACTTTATCGTCTTCATTTCAGATTGCTAGGAAAGAAGTGACCCTGGAAGAACGCGCTTTGGCTGCTGCAATTCCCATGGACGCAGAGAGATTTTCCATCTCATATGACCAAGGAGTTGATTCTGATGAAGAAAAAAGCGAGAGTAAAAGTTCAGGCCTGAAAGTTGGAGAGAAGGTTGATTTAGTAATTTCTGCTTAGTCGAGTACTGTTTACATAGTCTGATACATAATTAATTTCTTGTGCAGAGGAAACAACATAATCTGGAGTGGGACAATGAACTTGATATTAATGGGGGTAAGAAAGAACCAGTATGGCGAGTGAATTTTGATGAGTTTATTAAGCGTCTAAGGATAAAGGTGCTTACCCTCTTTTTCCGTTCTCGTGCTTTTTAATGTGTATTGCCTCGTTTTTATTAGAAATCTACTGATCTTGATAAGTTAAAGGTAAAGTTGCATAGAGTTATACTATGGTGGTGATGGTGTTGCTGTCTTGGGTAGATCTATGAATTTGCGGGTGGCAATGGTAGTAATTGATATCTTTTGCGTGTATGCTTCTTGAAATTCTCTTTTCCTTGTTTGCTTTACTCAAGGCCTGCGTTGAGTATGCCAGATCAGAGTATGACAACGTTGCAGCAGTGATTTTGAATTCTATGTTGGAAGGGACTCAAAGAACAACTAGCACAGGTAATCATGCTGTCGATATTTATCTACGCCTTTGCTGAGAAAATTTGCTGGTTTTCTCTAGTATTGTTTGTCCCTTCTTCTTAATGAACTGATGCCTGAAAGCAAGTTGACCTGTGATATGAAGACGAATTACTACTTGATTTTTGTTTTTCCAGAAATCAGGAGAACCAAAAATAGTTTGATCTGCTTGCTCAGTCATGGACTTTGATTATTAACTATGTGATGTGGACCTTTTTCTGGTTTCCCTGTATTATTTAAAATGCAAAACTCTGCTGTTGTATCTTTCTTGCATAATTTTGGCTAATCTGTGCTAGAAGCCTAGAACTTGGTCCAATAGGCTGCTAATGCTATATCCATGATGCTTATTAACCTATATTCTTAGTTGATGCTATGGCATGTTTCTTTTCATATGAATGAATATTACTTTCTACTTTCTTAAGTTGCTTGTTGACTTCTAGTCTTCTAAAACAACCTTTGCTAGTTTTGATGGATTAGGGGTACTATTGCATACATCTTAACCTCTCAAGAGTTTTCCTAGATCAACATCTGTGATCCTAGTTCTTACTTGTGATATGTGATAGAAATTAATTGTTCCTTTCTCTTGGGTATTTGGATCTTTCTCCTCTACTTGCAACTTAAATTATGTTAATGTCTTACTTGCTTGTCTGGATTTCTCTGGTAGACATGTATGTGTGTCATGGTTGGTCCAGATAGGATTTTATCAGTTTGTGTGAAATTCACGTCTAAACAATAATATTAAAAAAAAAAGACTTTCATTTGAATATTTCTAATTTTAGGTTCTTGTTTTCTTACACAGAAAACTATAGGGGTTTCTAGGTTTGGGTCGTCTCACAGTAGTTTTTTCTCAATGTTTTGTCCTTCTGATTGTAATATAATCACTTTGAGTGAAATATCCTGATGATTTTCCCTTGACTTATTTTTGGTTGGTTTTTTGAAGAGGCCAAATCTCCCTTCTGACACGTCTATAGGGGTAATTGATGCTTGTTTTCGGCATAATATTTTACTTTTAAGTTCTTGTTTTTCTTCCGTAGACAGCAATAGTGGTTTCTAGGTTTGGGTTTCTGACATAACTCCATAGTTTTTTTCTCCACTGCTTTGTCCATGTGATACTATTTTCTGTCGGGTTTTTTAAGAGGTGAAACCTCCATCTCTTGTTTATTTTATGATGCTTTCTTTTTTAGGTGTCGTGACTCCTTTTTTCTGTAGTTTCTCTTCTGGCTTTTCGCTATGGTTTATTGTTGCGCTTTTCTTGGCAGTGTCGTTGTCTCTGGATTCAATTTTCGAACAGGTTATTAAGAGAGAAGAAGGTCTCACTATGAACTTGGAGCATCTAAGATGCTCTCTTGAACAACTGGATTTTTGTTCTGAAGCAGATGATGTGTACACCATTAGTAAGAATTCTTCTGTGACTAGCAATACTTGCACTAAATGCCTGGATGCTTGAAGGCATTTTGTCCATTAATTTCAGGCTTTTGTATTAAAATGATTTTTTTTGCAGATCTGCATGAAATCATAAAGAAAGCTCAATTCGAAGAGGTCAGTTGGCTTGCCTATCTACAGATGTGTTTCTTTAGGAGTTTGATTTGAAATACGACTCTATTTATACAGTTATAAATTTCTGAACAGGTGGAGTCTATTGTGAAAAAGCGGTATGGGATAGAGGCTTTTAGGATGTTCAGGTCATTATCAAACGGTCGTCCACTGGATACTGATAAGGTAATTAATGGTTACAGTGTGGTTTTGCAAAGGCTGCTTCCTGTTTCTGAATAACTTGATACCTATTTTCATCAACAAAATTATGTTTACTACCTGTGATTCATGCTCGAGATGGAAATGTAAAGCATTGCTACTCCTGACTAAACATCACCCTGGGTTGGAAAATAGGCTGTCTGAGATATTGAATTAAAATTTTGAATAGCAAGTCATAAGTTAGCTGAAGAAGGTGGTTTTTGTATAATTTTCTTCATTTATCAAGACAGATAATTAAGACGGAGCTGCATTTTTCTTTGTTCTTTAGAAATGTAACTAACTGTCACCATTTTGCATTCTAGGAAAATGGATTAAATTAATATCTTACTCAGCCAGAATGTACTACTTATTACATGAAGTAGAACTATAGAGGCAAACCTAAATGAAGCCTTCAACGTAAATTGGGTTGGGTTAGATGAATTTTGCTGCAATACCAGGCAATGCAATCAGATGAAGTTTGATGCATACTAGCTGATGCAATCAAACCTTGAGGCATTTCTTGTGCATATTGCTGATTGTAAAAGAAAGAAATGCTACGTTTTGTTTTATATCAAATTTTTATATACTCTCTCTTTTTTTTACATCGACTACCTTACTTTCAGTTTTGGTCCTTCATCATTTCTCTATATTCGTAGAATTCCACTAAATCAATACTGCTGATCTTCTTTCACTCTTTCTTTAAATGCATGTAATAGGTTAACTAGGATGCTAGGGAAGTTAAAGTGAAACACGGGGACTCTTATGTCCTGCTTAAGGTTTGATGGTTATCTCCAAGTGGAAAGTAATACTACTAAAAGATTATTTGATATGCTTATTGGAATTGTTGGGCATAACTGGTTATTGTTTTTGCGACTATCTCTTATATGGTTAGACTAGACTTGACTTCTTCGGCAAACACAATATGAGAATGTAGCCTTGCATATCAAACAGTCTGTGTCCAGATTTTTTAATCATTTTATGCCAAGTGTTAGATCTGGTTTAGTTGTTTGGGAGACGAAGACTGAAGTGGCTTTTGGAATTGATGGTTTCTAGGATTCATGTATAATTTATGTTAAGGATTTGCCTTTCAGTGATATAGTTGATAGAAATGACTAGAAATCTTTTGACTCCTAGAAATTAATCTTTTGAAGTCTGGCCCCTTGTCCTCTTGATGCATTTTCTTAGTTCTTATGCACTTGTGCAGATTTCGGAACGTACCTTCGTTGACAAAAAAAGTACACCACAGATTCTGTATAAGCTTTGGAAGGATAATTACATACAAATGGAGGTATCCTCATTTTCACTGGATAATCTTCTTGGTTGTCTGTTATTAATCAGTTTATGTATCTGATTTTCAGTTACTCTTTCATATGGTTTCTGTGAACCTTTTTCGTCAAACAGTTCTTGCCTTACTTATTTGCATGCAATTGCAAAAATCTTCAATGTCTTTTCTAGAACCCCTTCCATTTAATGATTGTTAGTTTGGATTAAGAAATGTCTCCTTTTTGCTTTCCATGAAAATTCACCTTGACATTAATTTTGTTAGCAAATCACCGATGTGTTGCTTCTTTAAGGAATGTGTCTCAGGTTCTTTTCTTGCAACCTGTTTGATTTTGGATTGCAATTGTGCAGTCTTTAGCTGCTTAGATACCTAGAAAGTGGAGAACAAATCTGGTATTTTATTTTATTTTTTATAGAAGCAACTTTTTTGGAATAAGATGCCAAAAATGCAAGCTATAGCAGTTTGTGCAATGTCCCAGAAATCACTCGTAAGAATCTTTAAACCTGGTTGTCTGGTATAGAAAAATTTATTCGAAAATAGTCGAAGCACACTAAAACTAGTGATGTCAATGAGAAATACTTTACTTCACTACAATTAGCCAATCAACACTGTATTTATTAGGTGGGTAGGTTACATGGATTCTTTCCTATGGAAATGGCAATGGAGTCCATTCACCAAGTCTATCCCATAATGGCCAGTAGCTCGTGTGATTGTCTTTGGAAGATCTAAGACATGACTTTCAATAAAACCAGTTAGTTAACCTTTCATCTTAAAAGAAGAATAATTTTTTGATGCAATGAAAAGTTGAAAAGTAGAATAGTCAATTGTGGGTAACGGGGTCCTCTGATTGCCTGCCTCAGCTTTTCAGATTTGCAATTGCAAATAACTTCAATTTTCCCAAACTGAACATTTAGCTACGCGCATACTCCGTAAGTTTTACAATCAAGTAAAGTCGTGTTATGTACCCTATATCATGCTTTCCACTTTTCCTTTTTCTTGTGTTTGCTTGTACTGGTCGACACAAGATTTCTGGAAGTTATACCCTGCAGTTAAATGAGAATATGTTAATTTATATGATCATGAAAGTCTTCAGGTGAAAACTTTACTTTATTTTTGTTGTTCTTAAATTTTGTGTGGAAATTAGCCTCTGGTGTAAGAAAAATAACGAGTGAAATCTCAATTGCCTCAGTTAGATCTGGAACCCCTATGGATAATTCTTGCTGGAAAACTTTTCTCTGATGCAATTGTTGCACAAATTTTGATGTCCACCTGGCATACGATGTTCTAACTTCAAACGACCTAATGTCAGTAGATGCATTTTCTTTTTTCCAACTCCCTTTTTTTATTTTTATTTTCTGAATTTAGTTGTTTCATCTTTTGTTTTGTGCGTGTGTTATTTTCCCATGCCTGCAAATTAGATTCCGTTCCCCTACAAAGAAAGTTAATGTTAGGAATACCTTAAATCATGCCTCATAAGTTAATATATGCTTTTTGCAGAAAATAAGTACTGGAGGTCCAAGACAGACAGACTTCTTTTTATGGAGAGTGAAAAAAGACAATCTCTGGCATCAAATTTTGGATGAACTGTACCATGCTGCACTTAATCTGTCCCTGCGATATGCTCATGAAGTCGATCAAGAGCGAGAGGTACTATTATTGTTTTCCCTTTGCATTTTGTGAAGGCTATATAAAATGGCAAACTAGTAGTAGAAGGTCATGGACTCATGGCATAATTCCTGCAGAACTGATCTGGCTGGTTGACTTGTTTTAGATTATTTCAAAATAAAATCGTTGAAAAATTCTTTTATATATCAGCAGAGAAGCTTCGAGATTTATGCTACTCATTCGTTAATGTCACATCTATCTTAATATTTTAAAACATGAAGATTTGCATGCCACTTGTGCCCGCCTTAATATCTCTTTTATTTTTATATATTTTAACTTATTTTTTGTACAAGTCTCCCTAAATATTTAATAAAAAGAACTTTTAACATTCTTAAAACTCCCAATTAATCAATCCTTGATTATTTAGTTCATTGCCTCTTCAACTTTTATATCAAACATCATTATTTAATTTTATTAAAAAATATATACCGTGCGTCACACGGTCCAAAAAAAGCTAGTTACATGCAATTGTTGCATTGCTCTGTCATCTTGTTGCTTCTTGTCAACAAGCTAATCTGTCACTACCTTATGTTTTCCCTTCACCCCCCAATTGGTTTTCTTTTCATTCATCACGAGTGGCTAAATAATTGGTTAATGTGTCGTATGCTTTTCATGTATATATGTTATTGAAGTTGATATAGGTGTTGTTTGGTTGACATGAGAAGTATGACTTCCTAGGAAGTGGAAGATTGTGGTATTGTTTGGTTGACAAAAACATGGGAAGTCACACTTCCTAGGGGGGATGTTTGGTTGCAAGTAAATGAAGGGAGAAGTATGAATTCTTAGGAAGTGCATATATTGTAAGTTGTTTGGTTGGCATGAAATGAGAGTAAGGGGGAATTACCAATGCTATGAAACATGGGAAGTGACTTACCTATTCTGCCCTTGGTAAGTTATAATTCCCATGTCAATTCCCATAAATTACCATTGCCTAAGTTAAACCAAACATAAACATCATCAAGCTATTTCCTAGGAAGTTAACAAAGGAATTAAATTCCTATGAAATACAAGTTACTAACCAAACAAGCACCTAGGAGTAGTTCACTTCCCCAAAGTGGAGGAAGTTGCTTGCCTAGGTCCCCCTAGGTAAGTAGAACTTCCCACGTTCAATCAAACAACATGACCTGATTCCTAGGAAAATGCATGTACTTCTCTTAGGAAGTTCTAATTTCCTACGTTCAACCAAACGACCCCATGAATTCACTTGTTAAGTGATACTACAAATCTACAATAGTAATGTTTTTTTCATCACTTCAATTTGCTTAATCATATATTTTTTTCAACTTGCTTCTCCAGATCCAGAACTTGAGCATGGAAAACCCGCCACCGGAGGTTAAGAAGAGGAGAGAACGACTACGAAATGTGAGGTTTCTCCTAGACTCGTCCTTAATGAAGCTAGATGATGCCGTTATGCTCTTTCACGATTTTCTGGTATGAGTTCTTCTGTCTTCGAAGGGGTTATTAATTACCGGATTAGACGACAACGGTTACAAAGTAGAAGTATTTAACTCCATTTTTTGTAGTGCAAAATGTGAATTTTTCTTCATTTCTTCTTGTTCTTCAAGGCTTCAAGCTCTTCTCTTAGCTAAGTAAGTATGTCTTTAGTCTTTATAGAAATAATTTATAAATAATTCGAAGTACGATGTTATTTATTTATATGATTTAAAATCTAAAGTGGTTTTAGTAAAATGTAAATGACCCTATTTATTATTTATTATACTTCGTATTTGCTGATACTTTTACAAAAATTCACATATAAATATATAATGGTTAAAGGTCTGTTTGTCTCAACTGATTTTGACTTATTAC

mRNA sequence

GCTCAAAAGCTCGAAAAACAACACTGACAGTTAAAACACTGAAAGAACCACCGTAATCGATGGCGGCGCTGACACCGTACGGCATCAAACTCGCCGTCCACATCATCACTACCGACTTCGGAAACCTCGTCGCTAAAATATGCGAATGTATACTCAGAAGAGGAACCCAAAGTAGAGCGTTGATTTCTCGATTCACTGAACTCCCTCAAGACAAAGTGAAGAAATGTTTATGGGTTTTAATTCAGCATAATTGTGTTCAAGCTTTCGGCCTTGAACAAGAAGGGGGTGCCAGAGATACTACAGTGGTAGTCACACAGTACATGGCATTGTTTGATAACATCATTCAGCGCTTGAGGTTCCCGAAGTTCATGGTTACAGTGTCAATGGAGAAGGATAAAAAAGGTGAGGAGATTCTTGAAGGGTTGCTGCAGCATGGCAGACTCACTCTCACGCAAATTCTGGATAGAGCACGGGCCCGTTCAAGTGTAGGAAATCAAGATGCTCACCGAGAAAGCTTCAGAAAACTTGTTCGCGGCCGTTTTGTTGAACGGTGCCCTGCTCCAGAGCCATTAATATCTTTACCAACTGAGGGAGAAGGTCCTGCTAAGAAAGGAGGGGGGAGAAATAAGATTGCTAGGAAAGAAGTGACCCTGGAAGAACGCGCTTTGGCTGCTGCAATTCCCATGGACGCAGAGAGATTTTCCATCTCATATGACCAAGGAGTTGATTCTGATGAAGAAAAAAGCGAGAGTAAAAGTTCAGGCCTGAAAGTTGGAGAGAAGAGGAAACAACATAATCTGGAGTGGGACAATGAACTTGATATTAATGGGGGTAAGAAAGAACCAGTATGGCGAGTGAATTTTGATGAGTTTATTAAGCGTCTAAGGATAAAGGCCTGCGTTGAGTATGCCAGATCAGAGTATGACAACGTTGCAGCAGTGATTTTGAATTCTATGTTGGAAGGGACTCAAAGAACAACTAGCACAGTGTCGTTGTCTCTGGATTCAATTTTCGAACAGGTTATTAAGAGAGAAGAAGGTCTCACTATGAACTTGGAGCATCTAAGATGCTCTCTTGAACAACTGGATTTTTGTTCTGAAGCAGATGATGTGTACACCATTAATCTGCATGAAATCATAAAGAAAGCTCAATTCGAAGAGGTGGAGTCTATTGTGAAAAAGCGGTATGGGATAGAGGCTTTTAGGATGTTCAGGTCATTATCAAACGGTCGTCCACTGGATACTGATAAGATTTCGGAACGTACCTTCGTTGACAAAAAAAGTACACCACAGATTCTGTATAAGCTTTGGAAGGATAATTACATACAAATGGAGAAAATAAGTACTGGAGGTCCAAGACAGACAGACTTCTTTTTATGGAGAGTGAAAAAAGACAATCTCTGGCATCAAATTTTGGATGAACTGTACCATGCTGCACTTAATCTGTCCCTGCGATATGCTCATGAAGTCGATCAAGAGCGAGAGATCCAGAACTTGAGCATGGAAAACCCGCCACCGGAGGTTAAGAAGAGGAGAGAACGACTACGAAATGTGAGGTTTCTCCTAGACTCGTCCTTAATGAAGCTAGATGATGCCGTTATGCTCTTTCACGATTTTCTGGTATGAGTTCTTCTGTCTTCGAAGGGGTTATTAATTACCGGATTAGACGACAACGGTTACAAAGTAGAAGTATTTAACTCCATTTTTTGTAGTGCAAAATGTGAATTTTTCTTCATTTCTTCTTGTTCTTCAAGGCTTCAAGCTCTTCTCTTAGCTAAGTAAGTATGTCTTTAGTCTTTATAGAAATAATTTATAAATAATTCGAAGTACGATGTTATTTATTTATATGATTTAAAATCTAAAGTGGTTTTAGTAAAATGTAAATGACCCTATTTATTATTTATTATACTTCGTATTTGCTGATACTTTTACAAAAATTCACATATAAATATATAATGGTTAAAGGTCTGTTTGTCTCAACTGATTTTGACTTATTAC

Coding sequence (CDS)

ATGGCGGCGCTGACACCGTACGGCATCAAACTCGCCGTCCACATCATCACTACCGACTTCGGAAACCTCGTCGCTAAAATATGCGAATGTATACTCAGAAGAGGAACCCAAAGTAGAGCGTTGATTTCTCGATTCACTGAACTCCCTCAAGACAAAGTGAAGAAATGTTTATGGGTTTTAATTCAGCATAATTGTGTTCAAGCTTTCGGCCTTGAACAAGAAGGGGGTGCCAGAGATACTACAGTGGTAGTCACACAGTACATGGCATTGTTTGATAACATCATTCAGCGCTTGAGGTTCCCGAAGTTCATGGTTACAGTGTCAATGGAGAAGGATAAAAAAGGTGAGGAGATTCTTGAAGGGTTGCTGCAGCATGGCAGACTCACTCTCACGCAAATTCTGGATAGAGCACGGGCCCGTTCAAGTGTAGGAAATCAAGATGCTCACCGAGAAAGCTTCAGAAAACTTGTTCGCGGCCGTTTTGTTGAACGGTGCCCTGCTCCAGAGCCATTAATATCTTTACCAACTGAGGGAGAAGGTCCTGCTAAGAAAGGAGGGGGGAGAAATAAGATTGCTAGGAAAGAAGTGACCCTGGAAGAACGCGCTTTGGCTGCTGCAATTCCCATGGACGCAGAGAGATTTTCCATCTCATATGACCAAGGAGTTGATTCTGATGAAGAAAAAAGCGAGAGTAAAAGTTCAGGCCTGAAAGTTGGAGAGAAGAGGAAACAACATAATCTGGAGTGGGACAATGAACTTGATATTAATGGGGGTAAGAAAGAACCAGTATGGCGAGTGAATTTTGATGAGTTTATTAAGCGTCTAAGGATAAAGGCCTGCGTTGAGTATGCCAGATCAGAGTATGACAACGTTGCAGCAGTGATTTTGAATTCTATGTTGGAAGGGACTCAAAGAACAACTAGCACAGTGTCGTTGTCTCTGGATTCAATTTTCGAACAGGTTATTAAGAGAGAAGAAGGTCTCACTATGAACTTGGAGCATCTAAGATGCTCTCTTGAACAACTGGATTTTTGTTCTGAAGCAGATGATGTGTACACCATTAATCTGCATGAAATCATAAAGAAAGCTCAATTCGAAGAGGTGGAGTCTATTGTGAAAAAGCGGTATGGGATAGAGGCTTTTAGGATGTTCAGGTCATTATCAAACGGTCGTCCACTGGATACTGATAAGATTTCGGAACGTACCTTCGTTGACAAAAAAAGTACACCACAGATTCTGTATAAGCTTTGGAAGGATAATTACATACAAATGGAGAAAATAAGTACTGGAGGTCCAAGACAGACAGACTTCTTTTTATGGAGAGTGAAAAAAGACAATCTCTGGCATCAAATTTTGGATGAACTGTACCATGCTGCACTTAATCTGTCCCTGCGATATGCTCATGAAGTCGATCAAGAGCGAGAGATCCAGAACTTGAGCATGGAAAACCCGCCACCGGAGGTTAAGAAGAGGAGAGAACGACTACGAAATGTGAGGTTTCTCCTAGACTCGTCCTTAATGAAGCTAGATGATGCCGTTATGCTCTTTCACGATTTTCTGGTATGA

Protein sequence

MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEGPAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGEKRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSMLEGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDNYIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLSMENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFLV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo04483	Spo04483	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo04483.1	Spo04483.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04483.1.utr5p.1	Spo04483.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04483.1.CDS.14	Spo04483.1.CDS.14	CDS
Spo04483.1.CDS.13	Spo04483.1.CDS.13	CDS
Spo04483.1.CDS.12	Spo04483.1.CDS.12	CDS
Spo04483.1.CDS.11	Spo04483.1.CDS.11	CDS
Spo04483.1.CDS.10	Spo04483.1.CDS.10	CDS
Spo04483.1.CDS.9	Spo04483.1.CDS.9	CDS
Spo04483.1.CDS.8	Spo04483.1.CDS.8	CDS
Spo04483.1.CDS.7	Spo04483.1.CDS.7	CDS
Spo04483.1.CDS.6	Spo04483.1.CDS.6	CDS
Spo04483.1.CDS.5	Spo04483.1.CDS.5	CDS
Spo04483.1.CDS.4	Spo04483.1.CDS.4	CDS
Spo04483.1.CDS.3	Spo04483.1.CDS.3	CDS
Spo04483.1.CDS.2	Spo04483.1.CDS.2	CDS
Spo04483.1.CDS.1	Spo04483.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04483.1.utr3p.1	Spo04483.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04483.1.exon.14	Spo04483.1.exon.14	exon
Spo04483.1.exon.13	Spo04483.1.exon.13	exon
Spo04483.1.exon.12	Spo04483.1.exon.12	exon
Spo04483.1.exon.11	Spo04483.1.exon.11	exon
Spo04483.1.exon.10	Spo04483.1.exon.10	exon
Spo04483.1.exon.9	Spo04483.1.exon.9	exon
Spo04483.1.exon.8	Spo04483.1.exon.8	exon
Spo04483.1.exon.7	Spo04483.1.exon.7	exon
Spo04483.1.exon.6	Spo04483.1.exon.6	exon
Spo04483.1.exon.5	Spo04483.1.exon.5	exon
Spo04483.1.exon.4	Spo04483.1.exon.4	exon
Spo04483.1.exon.3	Spo04483.1.exon.3	exon
Spo04483.1.exon.2	Spo04483.1.exon.2	exon
Spo04483.1.exon.1	Spo04483.1.exon.1	exon

Homology

[Close]

BLAST of Spo04483.1 vs. NCBI nr
Match: gi|902228361|gb|KNA21067.1| (hypothetical protein SOVF_046680 [Spinacia oleracea])

HSP 1 Score: 1028.1 bits (2657), Expect = 5.400e-297
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 1


		  
Query: 1   MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL 60
           MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL
Sbjct: 1   MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL 60

Query: 61  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 120
           IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE
Sbjct: 61  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 120

Query: 121 GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG 180
           GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG
Sbjct: 121 GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG 180

Query: 181 PAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE 240
           PAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE
Sbjct: 181 PAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE 240

Query: 241 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 300
           KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML
Sbjct: 241 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 300

Query: 301 EGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEII 360
           EGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEII
Sbjct: 301 EGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEII 360

Query: 361 KKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDN 420
           KKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDN
Sbjct: 361 KKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDN 420

Query: 421 YIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLS 480
           YIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLS
Sbjct: 421 YIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLS 480

Query: 481 MENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFLV 522
           MENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFLV
Sbjct: 481 MENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFLV 521

[Close]

BLAST of Spo04483.1 vs. NCBI nr
Match: gi|731322404|ref|XP_010671870.1| (PREDICTED: DNA-directed RNA polymerase III subunit rpc3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 831.2 bits (2146), Expect = 9.700e-238
Identity = 419/520 (80.58%), Postives = 460/520 (88.46%), Query Frame = 1


		  
Query: 1   MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL 60
           MA  TPYGIKLAVH+I  DFGN+V+K+CEC+LRRGT S+ALI RFT+LPQDKVKK LWVL
Sbjct: 1   MATSTPYGIKLAVHLIVNDFGNIVSKVCECLLRRGTLSKALICRFTDLPQDKVKKSLWVL 60

Query: 61  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 120
           IQHNCVQAF LEQEGG RDTTVVVTQYM LF+NII RLRF KF    + + DK+  EILE
Sbjct: 61  IQHNCVQAFALEQEGGGRDTTVVVTQYMVLFNNIIHRLRFSKFATLATNDLDKEVFEILE 120

Query: 121 GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG 180
           GLLQHGRLTLTQILDRA    S G++D HRE+F KLV+ RFVERCPA EPLI+LPT+GE 
Sbjct: 121 GLLQHGRLTLTQILDRALDSHSGGSKDTHRETFIKLVQNRFVERCPAVEPLIALPTDGET 180

Query: 181 PAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE 240
           PAKKGGGR+K ++KEVTLEERALAAAIPMDAERFSI+ D G+DSDEEK E K SGLKVGE
Sbjct: 181 PAKKGGGRSKKSKKEVTLEERALAAAIPMDAERFSITSDDGIDSDEEKKE-KLSGLKVGE 240

Query: 241 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 300
           KRKQ  +EWD+ELDI GGKKEPVWRVNFDEFI RLRIKACVEYAR+EYDN AAVIL SML
Sbjct: 241 KRKQRKVEWDSELDIMGGKKEPVWRVNFDEFINRLRIKACVEYARAEYDNAAAVILGSML 300

Query: 301 EGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEII 360
           EGT+RT S VSLSLDSIFE+VIK +EGLTMNLE +R SLEQLDFCSE DD Y++NL +II
Sbjct: 301 EGTKRTESEVSLSLDSIFEEVIKSKEGLTMNLERVRSSLEQLDFCSEVDDTYSVNLKDII 360

Query: 361 KKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDN 420
           +KAQ EEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKIS+RTFVDKK TPQILYKLWKDN
Sbjct: 361 QKAQLEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISDRTFVDKKITPQILYKLWKDN 420

Query: 421 YIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLS 480
           YIQMEK++TGGPRQTDFFLWR+KKDNLWHQILDELYHAALNLSLRY HEVDQ+REI NLS
Sbjct: 421 YIQMEKVTTGGPRQTDFFLWRIKKDNLWHQILDELYHAALNLSLRYVHEVDQDREILNLS 480

Query: 481 MENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFL 521
            E  PPEV KR+ERL+ VR LLDSSLMKLDDA+MLFHDFL
Sbjct: 481 AEKAPPEVVKRKERLKKVRILLDSSLMKLDDAIMLFHDFL 519

[Close]

BLAST of Spo04483.1 vs. NCBI nr
Match: gi|731424113|ref|XP_010662742.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Vitis vinifera])

HSP 1 Score: 522.7 bits (1345), Expect = 7.300e-145
Identity = 286/530 (53.96%), Postives = 380/530 (71.70%), Query Frame = 1


		  
Query: 5   TPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQHN 64
           T YG++LAVH+I++ FGNLVAK+C+C+LR+GT + A + RFTELP  +VK C+ VLIQHN
Sbjct: 3   TQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQHN 62

Query: 65  CVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLLQ 124
           CVQAF ++QE G  +   VVTQYMALF NI+ R+RF KF+  VS E DK+ EEILEGLLQ
Sbjct: 63  CVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQ 122

Query: 125 HGRLTLTQILDRARARSSVGN---QDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEGP 184
           HGRLTL QILDRA++  S G    QDA RESF KLVR  FVERCPA EP ++ P+E E P
Sbjct: 123 HGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETP 182

Query: 185 AKKGGGRN-KIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE 244
           A+K G ++ K+  +  T+E+RA+AAA PMDA+RFS+  + G D D+      S  +  GE
Sbjct: 183 ARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDD------SPNVTAGE 242

Query: 245 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 304
           KRKQ  LE D E   +  +K+ +WR NF+EF++ LR KAC+   ++  D+ AA++L++ML
Sbjct: 243 KRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAML 302

Query: 305 EGTQ------RTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSE----ADD 364
           E T+      +T ++V LS+D+IFE V+K E G +M LE +R SL QL  C+     A +
Sbjct: 303 EATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLG-CAPCVRGAAE 362

Query: 365 VYTINLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLSNG-RPLDTDKISERTFVDKKST 424
            Y+++L  II+ AQ +EVESI  KRYG +A+R+FR LS   R L+TDKIS+ TFV+KK T
Sbjct: 363 SYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDT 422

Query: 425 PQILYKLWKDNYIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHE 484
            +ILY+LWKD Y+QMEK++  G RQ+ F LW+V KD LW  +L+E+YH+ALNLSLR A+E
Sbjct: 423 AKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYE 482

Query: 485 VDQEREIQNLSMENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDF 520
           ++QE+EI  L  E     +  R ERLR VR LL+SSLMKLDDA+MLF+DF
Sbjct: 483 LEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524

[Close]

BLAST of Spo04483.1 vs. NCBI nr
Match: gi|719985089|ref|XP_010251272.1| (PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Nelumbo nucifera])

HSP 1 Score: 508.1 bits (1307), Expect = 1.900e-140
Identity = 275/529 (51.98%), Postives = 370/529 (69.94%), Query Frame = 1


		  
Query: 5   TPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQHN 64
           T Y IKLA+ +I++ FG+LVAK+CEC+LR+G+ + A I+RFTELPQ +VK CL VLIQHN
Sbjct: 3   TQYSIKLAISLISSHFGDLVAKVCECLLRKGSLTLADITRFTELPQAQVKNCLLVLIQHN 62

Query: 65  CVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLLQ 124
           CVQAF ++ EGG      V+TQY A+FDNI+ R+RFPKF+  VS E DK+ EEILEGL Q
Sbjct: 63  CVQAFSIQIEGGVGAAPKVITQYTAIFDNILHRMRFPKFLTIVSEELDKECEEILEGLFQ 122

Query: 125 HGRLTLTQILDRARARSSVGN---QDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEGP 184
           HGRLTL QI+ RA +  + GN   QDA RESF ++V   +VERCPA EP ++ P E E P
Sbjct: 123 HGRLTLEQIILRAVSNQNEGNSTVQDAVRESFVRIVSSHYVERCPASEPFLAPPDEEENP 182

Query: 185 AKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVD-SDEEKSESKSSGLKVGE 244
            KK     ++A +  TLE+RA++AA P+++ERF++  D G D    ++S S+     +GE
Sbjct: 183 TKKRAKSARLAEEIETLEKRAISAAAPLESERFAVITDTGTDVKSGDRSGSRFLDTAIGE 242

Query: 245 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 304
           KRK   LE D E      +KE +WR NF+ FI+RLR KACV   R+  D+ A  +LN+ML
Sbjct: 243 KRKHEALEMDRETMATICEKEVLWRANFEAFIRRLRHKACVANVRARMDDGACTVLNAML 302

Query: 305 EGTQ------RTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSE---ADDV 364
           E T+      +T ++V LS+D+I  +V+K E G +M +E +R +L QL   S    A+D 
Sbjct: 303 EATRNAESRIKTENSVPLSMDAILAEVMKSEGGRSMTVERVRAALGQLGCRSSPRGAEDS 362

Query: 365 YTINLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLS-NGRPLDTDKISERTFVDKKSTP 424
           ++++L  II+ AQ +E+ESIV KRYG +A+R+FR LS  GR ++TDKIS+ TFVDKK  P
Sbjct: 363 HSVDLRNIIEIAQNDEMESIVLKRYGRDAYRIFRLLSKTGRLVETDKISDITFVDKKEAP 422

Query: 425 QILYKLWKDNYIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEV 484
           +ILY LWKDNY+ MEK+++ G +Q+DF LW+V + +LW QILDE+ HAALNLS R A+E 
Sbjct: 423 KILYNLWKDNYLHMEKLTSQGSKQSDFLLWKVNRSSLWKQILDEMCHAALNLSQRLAYEF 482

Query: 485 DQEREIQNLSMENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDF 520
           +QE EI  L  E       KR ER+R V+ +L+SSLMKLDDA+MLFHDF
Sbjct: 483 EQEHEILQLPREKRVGAQGKRFERIRKVKVILESSLMKLDDAIMLFHDF 531

[Close]

BLAST of Spo04483.1 vs. NCBI nr
Match: gi|629079992|gb|KCW46437.1| (hypothetical protein EUGRSUZ_K00269 [Eucalyptus grandis])

HSP 1 Score: 492.7 bits (1267), Expect = 8.100e-136
Identity = 274/527 (51.99%), Postives = 359/527 (68.12%), Query Frame = 1


		  
Query: 1   MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL 60
           M   + YGIK A HII++ FG+LVAK+CEC+LRRG  +   I RFTE+   +VK CL VL
Sbjct: 33  MVPPSQYGIKYAGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVL 92

Query: 61  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 120
           IQ NCVQAF +E  GG  DT+   T+Y+ALFDNII R+RFPKF+  VS E DK+  E+ +
Sbjct: 93  IQQNCVQAFSVEHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQ 152

Query: 121 GLLQHGRLTLTQILDRARA-RSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGE 180
           GLLQHGRLTL +++DRA++ +     QDA RE+  KL   RFVE CP PEP +S P+E E
Sbjct: 153 GLLQHGRLTLEKMIDRAKSGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSE-E 212

Query: 181 GPAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVG 240
            PA+K    +K+  +  T+EER LAAA PM+A+RF I +D   + D +K  +  S L VG
Sbjct: 213 APARKRTKSSKMVAEPETIEERVLAAATPMEAKRFLIIFDTTTEEDGQK--TGDSFLGVG 272

Query: 241 EKRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSM 300
           EKRK   LE + EL  +G  ++ +WRVN  EF+ R R KACVE  R   D  AAV L++M
Sbjct: 273 EKRKSDALESNKELGSDG--EQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAM 332

Query: 301 LEGTQ------RTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYT 360
           LE ++      +T ++V LS+++I+E+V+K E G  M L+HLR SL  L      D+ Y 
Sbjct: 333 LEISKSMEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGVDESYK 392

Query: 361 INLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLSNGR-PLDTDKISERTFVDKKSTPQI 420
           I+L  II++AQ EEVESIV KRYG EA+R+FR LS     L+T KIS+  FVDKK   +I
Sbjct: 393 IDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEISKI 452

Query: 421 LYKLWKDNYIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQ 480
           L++LWKD ++ MEKI   GPRQT F LW+V K  LW  +LDE+YHA LNL+LR A+E+++
Sbjct: 453 LFRLWKDQFLHMEKIVVTGPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRVAYELEK 512

Query: 481 EREIQNLSMENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDF 520
           E E+ NL +E     ++KR  RLR VR LL+SSLMKLDDA+MLFHDF
Sbjct: 513 ENELLNLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDDAIMLFHDF 554

[Close]

BLAST of Spo04483.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQD8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_046680 PE=4 SV=1)

HSP 1 Score: 1028.1 bits (2657), Expect = 3.800e-297
Identity = 521/521 (100.00%), Postives = 521/521 (100.00%), Query Frame = 1


		  
Query: 1   MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL 60
           MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL
Sbjct: 1   MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL 60

Query: 61  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 120
           IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE
Sbjct: 61  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 120

Query: 121 GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG 180
           GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG
Sbjct: 121 GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG 180

Query: 181 PAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE 240
           PAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE
Sbjct: 181 PAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE 240

Query: 241 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 300
           KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML
Sbjct: 241 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 300

Query: 301 EGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEII 360
           EGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEII
Sbjct: 301 EGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEII 360

Query: 361 KKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDN 420
           KKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDN
Sbjct: 361 KKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDN 420

Query: 421 YIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLS 480
           YIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLS
Sbjct: 421 YIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLS 480

Query: 481 MENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFLV 522
           MENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFLV
Sbjct: 481 MENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFLV 521

[Close]

BLAST of Spo04483.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FKE1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g055310 PE=4 SV=1)

HSP 1 Score: 831.2 bits (2146), Expect = 6.700e-238
Identity = 419/520 (80.58%), Postives = 460/520 (88.46%), Query Frame = 1


		  
Query: 1   MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL 60
           MA  TPYGIKLAVH+I  DFGN+V+K+CEC+LRRGT S+ALI RFT+LPQDKVKK LWVL
Sbjct: 1   MATSTPYGIKLAVHLIVNDFGNIVSKVCECLLRRGTLSKALICRFTDLPQDKVKKSLWVL 60

Query: 61  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 120
           IQHNCVQAF LEQEGG RDTTVVVTQYM LF+NII RLRF KF    + + DK+  EILE
Sbjct: 61  IQHNCVQAFALEQEGGGRDTTVVVTQYMVLFNNIIHRLRFSKFATLATNDLDKEVFEILE 120

Query: 121 GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG 180
           GLLQHGRLTLTQILDRA    S G++D HRE+F KLV+ RFVERCPA EPLI+LPT+GE 
Sbjct: 121 GLLQHGRLTLTQILDRALDSHSGGSKDTHRETFIKLVQNRFVERCPAVEPLIALPTDGET 180

Query: 181 PAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE 240
           PAKKGGGR+K ++KEVTLEERALAAAIPMDAERFSI+ D G+DSDEEK E K SGLKVGE
Sbjct: 181 PAKKGGGRSKKSKKEVTLEERALAAAIPMDAERFSITSDDGIDSDEEKKE-KLSGLKVGE 240

Query: 241 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 300
           KRKQ  +EWD+ELDI GGKKEPVWRVNFDEFI RLRIKACVEYAR+EYDN AAVIL SML
Sbjct: 241 KRKQRKVEWDSELDIMGGKKEPVWRVNFDEFINRLRIKACVEYARAEYDNAAAVILGSML 300

Query: 301 EGTQRTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYTINLHEII 360
           EGT+RT S VSLSLDSIFE+VIK +EGLTMNLE +R SLEQLDFCSE DD Y++NL +II
Sbjct: 301 EGTKRTESEVSLSLDSIFEEVIKSKEGLTMNLERVRSSLEQLDFCSEVDDTYSVNLKDII 360

Query: 361 KKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFVDKKSTPQILYKLWKDN 420
           +KAQ EEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKIS+RTFVDKK TPQILYKLWKDN
Sbjct: 361 QKAQLEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISDRTFVDKKITPQILYKLWKDN 420

Query: 421 YIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQEREIQNLS 480
           YIQMEK++TGGPRQTDFFLWR+KKDNLWHQILDELYHAALNLSLRY HEVDQ+REI NLS
Sbjct: 421 YIQMEKVTTGGPRQTDFFLWRIKKDNLWHQILDELYHAALNLSLRYVHEVDQDREILNLS 480

Query: 481 MENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDFL 521
            E  PPEV KR+ERL+ VR LLDSSLMKLDDA+MLFHDFL
Sbjct: 481 AEKAPPEVVKRKERLKKVRILLDSSLMKLDDAIMLFHDFL 519

[Close]

BLAST of Spo04483.1 vs. UniProtKB/TrEMBL
Match: E0CV20_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0050g00450 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 5.100e-145
Identity = 286/530 (53.96%), Postives = 380/530 (71.70%), Query Frame = 1


		  
Query: 5   TPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQHN 64
           T YG++LAVH+I++ FGNLVAK+C+C+LR+GT + A + RFTELP  +VK C+ VLIQHN
Sbjct: 3   TQYGVQLAVHLISSHFGNLVAKVCDCLLRKGTLTLASVIRFTELPPQQVKSCILVLIQHN 62

Query: 65  CVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLLQ 124
           CVQAF ++QE G  +   VVTQYMALF NI+ R+RF KF+  VS E DK+ EEILEGLLQ
Sbjct: 63  CVQAFAIQQEVGFGEAPRVVTQYMALFHNILHRMRFAKFLAIVSEELDKECEEILEGLLQ 122

Query: 125 HGRLTLTQILDRARARSSVGN---QDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEGP 184
           HGRLTL QILDRA++  S G    QDA RESF KLVR  FVERCPA EP ++ P+E E P
Sbjct: 123 HGRLTLEQILDRAKSNQSEGEPVVQDALRESFLKLVRAHFVERCPASEPFLAPPSEEETP 182

Query: 185 AKKGGGRN-KIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVGE 244
           A+K G ++ K+  +  T+E+RA+AAA PMDA+RFS+  + G D D+      S  +  GE
Sbjct: 183 ARKRGAKSAKLVEEPQTIEQRAIAAAAPMDAKRFSVIINTGTDVDD------SPNVTAGE 242

Query: 245 KRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSML 304
           KRKQ  LE D E   +  +K+ +WR NF+EF++ LR KAC+   ++  D+ AA++L++ML
Sbjct: 243 KRKQDALELDKETGAS-CEKDVLWRANFEEFVRCLRHKACIANVKTRLDDGAAIVLSAML 302

Query: 305 EGTQ------RTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSE----ADD 364
           E T+      +T ++V LS+D+IFE V+K E G +M LE +R SL QL  C+     A +
Sbjct: 303 EATRSEEKKVKTENSVPLSMDTIFEGVMKSEAGRSMTLERVRGSLIQLG-CAPCVRGAAE 362

Query: 365 VYTINLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLSNG-RPLDTDKISERTFVDKKST 424
            Y+++L  II+ AQ +EVESI  KRYG +A+R+FR LS   R L+TDKIS+ TFV+KK T
Sbjct: 363 SYSVDLKNIIELAQNDEVESITLKRYGRDAYRIFRLLSKSCRLLETDKISDTTFVEKKDT 422

Query: 425 PQILYKLWKDNYIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHE 484
            +ILY+LWKD Y+QMEK++  G RQ+ F LW+V KD LW  +L+E+YH+ALNLSLR A+E
Sbjct: 423 AKILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYE 482

Query: 485 VDQEREIQNLSMENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDF 520
           ++QE+EI  L  E     +  R ERLR VR LL+SSLMKLDDA+MLF+DF
Sbjct: 483 LEQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMKLDDAIMLFNDF 524

[Close]

BLAST of Spo04483.1 vs. UniProtKB/TrEMBL
Match: A0A058ZXG9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K00269 PE=4 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 5.700e-136
Identity = 274/527 (51.99%), Postives = 359/527 (68.12%), Query Frame = 1


		  
Query: 1   MAALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVL 60
           M   + YGIK A HII++ FG+LVAK+CEC+LRRG  +   I RFTE+   +VK CL VL
Sbjct: 33  MVPPSQYGIKYAGHIISSHFGDLVAKVCECLLRRGPLTHQNIVRFTEMSASQVKNCLLVL 92

Query: 61  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 120
           IQ NCVQAF +E  GG  DT+   T+Y+ALFDNII R+RFPKF+  VS E DK+  E+ +
Sbjct: 93  IQQNCVQAFSVEHPGGVGDTSRRSTEYLALFDNIIHRMRFPKFVAVVSQELDKECVELFQ 152

Query: 121 GLLQHGRLTLTQILDRARA-RSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGE 180
           GLLQHGRLTL +++DRA++ +     QDA RE+  KL   RFVE CP PEP +S P+E E
Sbjct: 153 GLLQHGRLTLEKMIDRAKSGQEDSTAQDATREALSKLANARFVEHCPDPEPHLSPPSE-E 212

Query: 181 GPAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVG 240
            PA+K    +K+  +  T+EER LAAA PM+A+RF I +D   + D +K  +  S L VG
Sbjct: 213 APARKRTKSSKMVAEPETIEERVLAAATPMEAKRFLIIFDTTTEEDGQK--TGDSFLGVG 272

Query: 241 EKRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSM 300
           EKRK   LE + EL  +G  ++ +WRVN  EF+ R R KACVE  R   D  AAV L++M
Sbjct: 273 EKRKSDALESNKELGSDG--EQVLWRVNVQEFMHRFRHKACVENVRERLDGGAAVALSAM 332

Query: 301 LEGTQ------RTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLDFCSEADDVYT 360
           LE ++      +T ++V LS+++I+E+V+K E G  M L+HLR SL  L      D+ Y 
Sbjct: 333 LEISKSMEKKVKTDNSVPLSINTIYEEVMKGEAGRAMTLDHLRASLVMLGCEKGVDESYK 392

Query: 361 INLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLSNGR-PLDTDKISERTFVDKKSTPQI 420
           I+L  II++AQ EEVESIV KRYG EA+R+FR LS     L+T KIS+  FVDKK   +I
Sbjct: 393 IDLKNIIEQAQNEEVESIVLKRYGQEAYRIFRLLSKANCLLETGKISDTAFVDKKEISKI 452

Query: 421 LYKLWKDNYIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAHEVDQ 480
           L++LWKD ++ MEKI   GPRQT F LW+V K  LW  +LDE+YHA LNL+LR A+E+++
Sbjct: 453 LFRLWKDQFLHMEKIVVTGPRQTQFLLWKVDKTTLWPHVLDEMYHAVLNLNLRVAYELEK 512

Query: 481 EREIQNLSMENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDF 520
           E E+ NL +E     ++KR  RLR VR LL+SSLMKLDDA+MLFHDF
Sbjct: 513 ENELLNLPIEKRSGPLEKRYNRLRTVRLLLESSLMKLDDAIMLFHDF 554

[Close]

BLAST of Spo04483.1 vs. UniProtKB/TrEMBL
Match: V4RLV1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004721mg PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 3.600e-130
Identity = 262/531 (49.34%), Postives = 363/531 (68.36%), Query Frame = 1


		  
Query: 4   LTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQH 63
           LT YG K AVH+IT  FG+LVAK+CEC+LR+G  +R  + R+TEL  ++VK  L VLIQ 
Sbjct: 2   LTEYGTKHAVHVITNHFGDLVAKVCECLLRKGPLTRQNVKRYTELSDEQVKNALLVLIQQ 61

Query: 64  NCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLL 123
           NCVQAF  EQ  G  D     TQY+ LFDNI+ R+RF KF+  +S E D++  E+++GLL
Sbjct: 62  NCVQAFTTEQPDGFADGPKANTQYVVLFDNILHRVRFAKFLTILSQEFDQQCVELVQGLL 121

Query: 124 QHGRLTLTQILDRARARSSVGNQ---DAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG 183
           +HGRLTL Q+ DRA++    GN    D+ RE+  KLV   +VERCPA EPL+   +E EG
Sbjct: 122 EHGRLTLKQMFDRAKSSEKEGNLVDLDSLRETLVKLVTAHYVERCPASEPLLMPISEEEG 181

Query: 184 PAKKGGGRN--KIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKV 243
           PA+K G ++  KI   E T+E++ + AA+PM+A RFS+  +  V+SD  + E  S+ +  
Sbjct: 182 PARKKGSKSAKKIGEPE-TIEQQVVEAALPMEAMRFSVVTN--VESDVGEKEKNSNNVTP 241

Query: 244 GEKRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNS 303
           GEKRK   LE D E  +   ++  V+R NF+ FI+RLR K C+++ R+  D+ AA +L++
Sbjct: 242 GEKRKHDVLELD-ECGV-ADEQSVVYRANFEGFIRRLRHKGCIDHVRAHLDDGAANVLSA 301

Query: 304 MLEGTQ------RTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQL---DFCSEAD 363
           ML+ T       +T ++V LSL SI+E+VIK E G  M L+H+R SL QL    F   + 
Sbjct: 302 MLQATSSAEKKVKTKNSVPLSLSSIYEEVIKSEAGRNMTLDHVRASLVQLGELSFVDASS 361

Query: 364 DVYTINLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLS-NGRPLDTDKISERTFVDKKS 423
           D Y+I+  +II+ AQ EEVES+V KRYG +A+R+FR LS +GR L+TDKIS+ TFV+KK 
Sbjct: 362 DSYSIDFEKIIEIAQNEEVESVVSKRYGRDAYRIFRLLSKSGRLLETDKISDTTFVEKKD 421

Query: 424 TPQILYKLWKDNYIQMEKISTGGPRQTDFFLWRVKKDNLWHQILDELYHAALNLSLRYAH 483
            P+ILYKLWKD Y+ MEK+   G RQ+ F LW+V +  LW  +LDE++HAALNLSLR ++
Sbjct: 422 APKILYKLWKDGYLLMEKLVVTGARQSQFLLWKVNRQILWKHVLDEMFHAALNLSLRVSY 481

Query: 484 EVDQEREIQNLSMENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDF 520
           E+D+E+E+ NL  +     ++ R  R+R VR LL+SS MKLDDA++LFHDF
Sbjct: 482 ELDREKELLNLPADKRTGPLQDRYNRIRKVRILLESSQMKLDDAILLFHDF 527

[Close]

BLAST of Spo04483.1 vs. ExPASy Swiss-Prot
Match: RPC3_DANRE (DNA-directed RNA polymerase III subunit RPC3 OS=Danio rerio GN=polr3c PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.800e-27
Identity = 121/500 (24.20%), Postives = 216/500 (43.20%), Query Frame = 1


		  
Query: 4   LTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQH 63
           +T   ++L   ++   FG++V  +   ++R G  +   ++  T+L  D VKK L VL+QH
Sbjct: 1   MTAQEVRLCGLLLQEHFGDVVENVGTHLIRNGVLTLRALAHETKLALDLVKKSLCVLVQH 60

Query: 64  NCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLL 123
                FG  + G A        +Y    ++I+  LR+P+++ T        GE I+E +L
Sbjct: 61  GMC-TFGPGRRGPAGPV-----EYHINCEHILHMLRYPRYIYTAKSLYGDTGELIVEEIL 120

Query: 124 QHGRLTLTQ----ILDRARARSSVGNQDAHRE---SFRKLVRGRFVERCPAPEPLISLPT 183
           Q G++T++     + DR       G    + E   +F +LV   F++RCP   P+ S  +
Sbjct: 121 QRGQMTMSSTVKTVADRLTHNMPEGQSMDYNEVVSAFSRLVETHFLQRCP---PMASAES 180

Query: 184 EGEGPAKKGGGRNKIARKEVTLEERALAAAIPMDAERFSISYD------QGVDSDEEKSE 243
            G G A                 E   A   P + E     Y        G       SE
Sbjct: 181 SGTGSA-----------------ETPPAVTQPSNPESHPDCYKLPYISLSGHGKRRRSSE 240

Query: 244 SKSSGLKVGEKRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDN 303
              +  +  +K K  + E  +E  I+       W+VNF+ F    R +A +     + D 
Sbjct: 241 DGEADQRAAKKAKTDSSECGDE-GIH-------WQVNFERFHLHFRDQAIISAVSCKLDQ 300

Query: 304 VAAVILNSMLEGTQRTTS-----TVSLSLDSIFEQVIKREEGLTMNLEHLRCSL--EQLD 363
            +  I+ +ML  ++ TTS     T +LS + IF  +          L+     L  + ++
Sbjct: 301 TSGEIVRTMLRMSEVTTSANAAFTQALSANEIFRALPSNYNIARPILDQYLTLLVDDPME 360

Query: 364 FCSEADD----VYTINLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKIS 423
           F  +A D    ++ +NLH  +       +ES+V++R+G  + R+FR L   R L+  ++ 
Sbjct: 361 FVGKAGDSGGGMFVVNLHRALANLARATLESVVQERFGSRSARIFRLLLRKRHLEQKQVE 420

Query: 424 ERTFVDKKSTPQILYKLWKDNYIQMEKI---STGGPRQTDFFLWRVKKDNLWHQILDELY 477
           +   +  K   ++LY L  +N +Q+++I       P +T F+L+ V +      +L   Y
Sbjct: 421 DFAMIPAKEAKEMLYTLLSENLVQLQEIPKTPDHAPSRT-FYLYAVNQLPTARLLLQHCY 465

[Close]

BLAST of Spo04483.1 vs. ExPASy Swiss-Prot
Match: RPC3_RAT (DNA-directed RNA polymerase III subunit RPC3 OS=Rattus norvegicus GN=Polr3c PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.600e-25
Identity = 135/563 (23.98%), Postives = 241/563 (42.81%), Query Frame = 1


		  
Query: 4   LTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQH 63
           +T   IKL   ++   FG +V KI   ++R G+Q   +I+  T+   D+VKK L VLI H
Sbjct: 1   MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTKASLDQVKKALCVLIHH 60

Query: 64  NCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLL 123
           N V  + + + G        V +Y A    +++ LR+P+++ T        GE I+E LL
Sbjct: 61  NLV-IYHVHKRG--------VVEYEAQCSRVLRMLRYPRYIYTTKTLYGDTGELIVEELL 120

Query: 124 QHGRLTLTQILDRARARSSVGNQDAH-------RESFRKLVRGRFVERCPAPEPLISLPT 183
            +G++T++ ++ +   R +   +D           +F +L    FV+RCP     +   T
Sbjct: 121 LNGKMTMSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCP-----LVPDT 180

Query: 184 EGEGPAKKGGGRN-KIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSG 243
           +   P       N  I  K++ L  +   + I     R S        SDE+ +      
Sbjct: 181 DSSDPGPPPPAPNLVINEKDMYLVPK--LSLIGKGKRRRS--------SDEDAAGEP--- 240

Query: 244 LKVGEKRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVI 303
            K  + R   N E   +  I        W+VN D F +  R +A V    +  D  ++ I
Sbjct: 241 -KAKKPRCTDNEEPTPDDGI-------YWQVNLDRFHQHFRDQAIVSAVANRMDQTSSEI 300

Query: 304 LNSMLEGTQRTTS-----TVSLSLDSIFEQVIKREEGLTMNLEHLRCSL--EQLDFCSEA 363
           + +ML  ++ TT      T  LS + IF  +          L+     L  + L+F  +A
Sbjct: 301 VRTMLRMSEITTPSGAPFTQPLSSNEIFRSLPVGYNISKQVLDQYLTLLADDPLEFIGKA 360

Query: 364 DD----VYTINLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLSNGRPLDTDKISERTFV 423
            D    +Y INLH+ +       +ES++++R+G    R+FR +   + L+  ++ +   +
Sbjct: 361 GDSGGGMYVINLHKALASLSTATLESVIQERFGSRCARIFRLVLQKKHLEQKQVEDFAMI 420

Query: 424 DKKSTPQILYKLWKDNYIQMEKI---STGGPRQTDFFLWRVKKDNLWHQILDELYHAALN 483
             K    +LYK+  +N+I +++I       P +T F+L+ V   +    +L   Y +  N
Sbjct: 421 PAKEAKDMLYKMLSENFISLQEIPKTPDHAPSRT-FYLYTVNVLSAARMLLHRCYKSIAN 480

Query: 484 LSLRYAHEVD------------------------QEREIQNLSMENPPPEVKKRRERLRN 521
           L  R   E                          +E ++Q +      PE ++     RN
Sbjct: 481 LIERRQFETKENKRLLEKSQRVEAIMASMQATGAEEVQLQEIEEMITAPERQQLETLKRN 526

[Close]

BLAST of Spo04483.1 vs. ExPASy Swiss-Prot
Match: RPC3_DICDI (DNA-directed RNA polymerase III subunit rpc3 OS=Dictyostelium discoideum GN=polr3c PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.200e-15
Identity = 67/206 (32.52%), Postives = 100/206 (48.54%), Query Frame = 1


		  
Query: 7   YGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTE----LPQDKVKKCLWVLIQ 66
           Y  K+A+ I+   FG+ V K+ E +++RG  S  +I++       L   ++K+CL VLIQ
Sbjct: 2   YEQKVAIDIVKESFGDDVTKVFEFLVQRGKSSYKIINQSLSGKGGLTIKRIKQCLLVLIQ 61

Query: 67  HNCV--QAFGLEQEGGARDTTVVV------TQYMALFDNIIQRLRFPKFMVTVSMEKDKK 126
           HN V  + F L       +  V        + Y A+  N I RLRFPKF+  +   K  +
Sbjct: 62  HNLVTYEEFLLPLTKDEIEKLVPGEPLPSDSVYEAIIVNAIHRLRFPKFINYIKHSKGDE 121

Query: 127 GEEILEGLLQHGRLTLTQILDRARARSSVG---NQD----AHRESFRKLVRGRFVERCPA 186
              ILE L+ HGRL +  ++ +A     V    +QD       ++F KL+  +F+ R P 
Sbjct: 122 AAYILEELIDHGRLPMDLLIKQASQIQRVDTFEDQDDITKRFEDTFTKLIMDQFIMRAPR 181

Query: 187 PEPLISLPTEG--EGPAKK--GGGRN 190
           P P+    T       AKK  GGG N
Sbjct: 182 PRPVSDQETSNALSKEAKKVGGGGAN 207

[Close]

BLAST of Spo04483.1 vs. ExPASy Swiss-Prot
Match: RPC3_BOVIN (DNA-directed RNA polymerase III subunit RPC3 OS=Bos taurus GN=POLR3C PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 6.000e-14
Identity = 52/170 (30.59%), Postives = 88/170 (51.76%), Query Frame = 1


		  
Query: 4   LTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQH 63
           +T   IKL   ++   FG +V KI   ++R G+Q   +I+  T    D+VKK L VLIQH
Sbjct: 1   MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQH 60

Query: 64  NCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLL 123
           N V  + + + G        V +Y A  + +++ LR+P+++ T        GE I+E LL
Sbjct: 61  NLV-TYQVHKRG--------VVEYEAQCNRVLRMLRYPRYIYTAKTLYSDTGELIVEELL 120

Query: 124 QHGRLTLTQILDRARARSSVGNQDAH-------RESFRKLVRGRFVERCP 167
            +G++T++ ++ +   R +   +D           +F +LV   FV+RCP
Sbjct: 121 LNGKMTMSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLVDTHFVQRCP 161

[Close]

BLAST of Spo04483.1 vs. ExPASy Swiss-Prot
Match: RPC3_HUMAN (DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens GN=POLR3C PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.000e-13
Identity = 51/171 (29.82%), Postives = 88/171 (51.46%), Query Frame = 1


		  
Query: 4   LTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTELPQDKVKKCLWVLIQH 63
           +T   IKL   ++   FG +V KI   ++R G+Q   +I+  T    D+VKK L VL+QH
Sbjct: 1   MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQH 60

Query: 64  NCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILEGLL 123
           N V ++ + + G        V +Y A    +++ LR+P+++ T        GE I+E LL
Sbjct: 61  NLV-SYQVHKRG--------VVEYEAQCSRVLRMLRYPRYIYTTKTLYSDTGELIVEELL 120

Query: 124 QHGRLTLTQILDRARARSSVGNQDAH-------RESFRKLVRGRFVERCPA 168
            +G+LT++ ++ +   R +   +D           +F +L    FV+RCP+
Sbjct: 121 LNGKLTMSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPS 162

[Close]

BLAST of Spo04483.1 vs. TAIR (Arabidopsis)
Match: AT3G49000.1 (RNA polymerase III subunit RPC82 family protein)

HSP 1 Score: 392.9 bits (1008), Expect = 3.100e-109
Identity = 227/536 (42.35%), Postives = 339/536 (63.25%), Query Frame = 1


		  
Query: 3   ALTPYGIKLAVHIITTDFGNLVAKICECILRRGTQSRALISRFTE--LPQDKVKKCLWVL 62
           +++ +GI  A+HIIT  FG++V+K+CEC+LR+G  S   ISR  E  +  +KVK  L++L
Sbjct: 2   SMSEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESDINHNKVKDILYLL 61

Query: 63  IQHNCVQAFGLEQEGGARDTTVVVTQYMALFDNIIQRLRFPKFMVTVSMEKDKKGEEILE 122
           IQHNCVQAF +E   G+    +V  QY+ LF+NI+ R+R+ KF   V+ E D K   +L+
Sbjct: 62  IQHNCVQAFSIEPPDGSESKAIV--QYIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLD 121

Query: 123 GLLQHGRLTLTQILDRARARSSVGNQDAHRESFRKLVRGRFVERCPAPEPLISLPTEGEG 182
           GLL +GRLTL Q ++R R   +    +A R+S +KLV  RFVER P+PEP++    + + 
Sbjct: 122 GLLSNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPEPVLG--NKEKE 181

Query: 183 PAKKGGGRN-KIARKEVTLEERALAAAIPMDAERFSISYDQGVDSDEEKSESKSSGLKVG 242
           PAK+ G +  KI ++  TLEE+ + AA P+DA RF + +++  DS+   ++  S+  +  
Sbjct: 182 PAKRRGAKAAKILKEPETLEEQVVEAATPVDAIRFPLIFEE--DSNSSLADDNSNITE-- 241

Query: 243 EKRKQHNLEWDNELDINGGKKEPVWRVNFDEFIKRLRIKACVEYARSEYDNVAAVILNSM 302
            KRKQ       ++D +      +WR NF+EFI RLR KACVE  +   D   A++L +M
Sbjct: 242 GKRKQR------DVDTSDSSSGVIWRPNFEEFIHRLRHKACVEIVKERRDEGCAIVLRAM 301

Query: 303 LEGTQ------RTTSTVSLSLDSIFEQVIKREEGLTMNLEHLRCSLEQLD--------FC 362
           LE  +      +T ++  +S+ SI+E+VIK E G TM  E +   L+QL         F 
Sbjct: 302 LEVGRSQEKKVKTDNSAPMSVGSIYEEVIKTEAGRTMLQERVEACLDQLSATSSYLPAFV 361

Query: 363 SEADDVYTINLHEIIKKAQFEEVESIVKKRYGIEAFRMFRSLSN-GRPLDTDKISERTFV 422
           +E +D Y ++   II  AQ +E+E++V +RYG EAFRMFR LS  GR ++TDKI++    
Sbjct: 362 NEVNDSYIVDYKSIISVAQKDEIEAVVMRRYGKEAFRMFRYLSQEGRFVETDKIADAALT 421

Query: 423 DKKSTPQILYKLWKDNYIQMEKISTGGPRQ-TDFFLWRVKKDNLWHQILDELYHAALNLS 482
           +KK TPQ L K+WKD Y+ M+K++   P   T F LW+V K  +  Q+LDE+YHA+LNLS
Sbjct: 422 EKKDTPQFLLKMWKDGYLHMQKLAVTAPGMYTPFLLWKVNKLIVTTQMLDEMYHASLNLS 481

Query: 483 LRYAHEVDQEREIQNLSMENPPPEVKKRRERLRNVRFLLDSSLMKLDDAVMLFHDF 520
           LR AHE++ E+E+  L ++     +K+R ++++  R LL S++ KLDDA+MLFHDF
Sbjct: 482 LRLAHELEAEKELLLLPLDKLEGPLKERLKKVKAKRLLLSSTMFKLDDAIMLFHDF 523

The following BLAST results are available for this feature:

BLAST of Spo04483.1 vs. NCBI nr
BLAST of Spo04483.1 vs. UniProtKB/TrEMBL
BLAST of Spo04483.1 vs. ExPASy Swiss-Prot
BLAST of Spo04483.1 vs. TAIR (Arabidopsis)

BLAST of Spo04483.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902228361\|gb\|KNA21067.1\|	5.4e-297	100.	hypothetical protein SOVF_0466...	[more]
gi\|731322404\|ref\|XP_010671870.1\|	9.7e-238	80.5	PREDICTED: DNA-directed RNA po...	[more]
gi\|731424113\|ref\|XP_010662742.1\|	7.3e-145	53.9	PREDICTED: DNA-directed RNA po...	[more]
gi\|719985089\|ref\|XP_010251272.1\|	1.9e-140	51.9	PREDICTED: DNA-directed RNA po...	[more]
gi\|629079992\|gb\|KCW46437.1\|	8.1e-136	51.9	hypothetical protein EUGRSUZ_K...	[more]

BLAST of Spo04483.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RQD8_SPIOL	3.8e-297	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FKE1_BETVU	6.7e-238	80.5	Uncharacterized protein OS=Bet...	[more]
E0CV20_VITVI	5.1e-145	53.9	Putative uncharacterized prote...	[more]
A0A058ZXG9_EUCGR	5.7e-136	51.9	Uncharacterized protein OS=Euc...	[more]
V4RLV1_9ROSI	3.6e-130	49.3	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo04483.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RPC3_DANRE	2.8e-27	24.2	DNA-directed RNA polymerase II...	[more]
RPC3_RAT	2.6e-25	23.9	DNA-directed RNA polymerase II...	[more]
RPC3_DICDI	4.2e-15	32.5	DNA-directed RNA polymerase II...	[more]
RPC3_BOVIN	6.0e-14	30.5	DNA-directed RNA polymerase II...	[more]
RPC3_HUMAN	1.0e-13	29.8	DNA-directed RNA polymerase II...	[more]

BLAST of Spo04483.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G49000.1	3.1e-109	42.3	RNA polymerase III subunit RPC...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008806	RNA polymerase III Rpc82, C -terminal	PFAM	PF05645	RNA_pol_Rpc82	coord: 152..320 score: 2.7
IPR013197	RNA polymerase III subunit RPC82-related, helix-turn-helix	PFAM	PF08221	HTH_9	coord: 10..69 score: 3.5
None	No IPR available	PANTHER	PTHR12949	RNA POLYMERASE III DNA DIRECTED -RELATED	coord: 3..520 score: 2.6E
None	No IPR available	PANTHER	PTHR12949:SF0	DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC3	coord: 3..520 score: 2.6E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity