Spo04505.1 (mRNA) | SpinachBase

Overview


Name	Spo04505.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	BnaA04g07010D protein
Location	chr6 : 31724128 .. 31728089 (+)
Sequence length	1227

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGTGAACAAAAACCAAAAAGAAAAATCAAGAGATTTGTTGAACACTTGAACCGTTGGTACTTGGTAGAACCATAAAAATTTGTAGAACTTTGCAACAGACTCAGAAATTAGCACCAAAAAAAAGACTCAGAAATGATGGTAGGTGGAGTTTCATCTTCAGTTACCCAGCAATCTACTTCTTGTTCACCATTAAACTCCCTTTTTCAAAATCGTACAATTTGCTCAAACTCCCAATTTCCATCACTTTTGATTGCTAATTACCGACACAATCATCTTCCTACTTTTCCACAACTTTCCTTCTCCTCTCGTTCTCAATCCCCAAAACCCATTTACTGCAGCAATTCCCCTGGCGCTGGTTAGTTTCTCGCTCTTTTTTGCACTCAATTTTGTGTTCATGATGTTTCATTGAGAAGGGTTGTGCATTAATATGTTGATTTCTGCTGAATTTGACGAACTTGGTTTGAGTTATTTATTTAAATTAATTGTGCTTTGATTATTCTGCTGAAATTGACGAATTGGGTTTGAATTATTCATTGAAATGGATTGTGCTTTGGAATTTGATCTTTCTGTTGAAATTGAAGAATTGGGTTTGAGTTAATCTGGGTAGTTTCGGTGAATTTGTTGATGGGTGAACTATAGTTTGTGTTGAGGAATTGAGCTTGTTGTTTGGAGTGATTATGAATTGCTGAAATGAGTAAAAAAAAACAACTGAAGTAGTATGCCTATGAATCACACTATGATTTAATCACCTTCCTTGAGTATTGGAAATTTGAAACAGGAGCAATTGTTTAGCAATTAGCATGTTGTTTACCACTTTAGTTATGTACTAGTCGAACGGACTTGGACCCGATGTCTAATACTAACATACCAAAGAACTTAGAAATTTATTAAAAGTTTTGAGTCTCAGGCCGGGATCTGATTCGAGTTCATTCAATCAAGAATTTGAAAGCAACTTGCAAGTGGTTTGCATAAGACGTTTTGGGGAGAATATATTGAGCTTCAGAGCTTGGGGTTTATCTACTGAGGAGGTGTTGAGGAGTGAAAACCCCATTCTTACATCGAAAGATGGTTTTTGATTGAAGTGACTTAGCATGTTGGTGCCAGTGGTTGCTTGTATGGAAGTGACTCAGAATGTTGATGGGTTTATCTCTTGTATGTTTCATGAATTTTGCTCTATTAGTTCTCATCTATGATTTCTAGTAGTTTCTAAGAGGCTAGGTTTGTAGTTCCAGCCATGACGATGCAACGATACGAAGTATATGGTTAGTTAAGTGTAATTCATAGGGGATGAGTACATGAGATTATGAGAAGGATACGGAAGTACTTGTAAACCTTTGCTAATTATTTCGAGGTCAGATAGATCTTTATGAATAAGTAGATTGCTTGGTGTTTGTGGAAAGTAGATCCGCGGAGGCTTAGTAGGTGTCAGCTGTCTATACAAACATCCTGCTGAAACCTCAACAAAAGAAGCTAATTGGTCTCTGTTCATAGAAAATATTGAAACTAAAAATCAGTGCACAAGTTATTGTTGTCAATGGAGTGTATTTTGTTGGTTGAATGAATAGAACATTTTACTAACGATGTTGCAGTAAAGGGTCTCAAACTGGGATGATTTAGCACCAAATTGGCAACTTGGCAAGAACTTTCCTTGCAACTGAAACTTGAGTTATTGTCAATTTATTTCTCAAACAGTATCATCTTAAAATCATATCCTAGGGGCAGTTGTTAAAATGGTCATCAGTGCTGTTAAGTGTTAACTGTCCAGTTTAGGTGTTTGAATGTTGTAATATCTGAAATATAGTTTGTATTTTATATCTCATGGTTTCTAACTTTATGAAGTTTCACTCTTAAAGTGAAGTACTGACGTCTATTATAAATTTCTTATTTTCGTGAAGATTGGTTAAGTCGCTTGGATTGTTGGGTTAGCAATTTTTATACTTCTGCCCGAATTTTCTTGTGACTGAGTTCCTAATGTCATGCAATTGAGATATTTGGGCTAGGAATCTGGATGTAAACATATCCTCTTCCCCATTCTTCTTAGATATCCTTACAATATCAACTTCATTAATTACGTCTAGTACATGACTAGTAGCATTGGTTATTAGAGCATCACCATTGGTGAACCTTCATTTGGTACTCAAAAACCTTTCATAATTGCTTCTTTTTTGAAACCCCTTTTGAAACTCAAACACCTAATGGTATCTCTTAAATTTTTCATTTATTAATGAATGAATATTTCAGATTTTGTTTTAAAACAAACTTTCCTTTAGAGGAAAAGACCCCTTTGTAAAGAGTTATAAAAAATAATAACTGTTGTCATTTTTGATAACTCGTCCAATGAAGGGGCTCTTCTTTAGCAAGACTTTTTCTCCTTTTCTTCCCCTATTTGAGCCTCCCGTTGGAGATGAACTTAGGCTCTGTTGAAATTCCATGCTGATAAATTTAGAAGGTAATATATGTTGGCTAGATCTAATCCTGCAGGAAAGCTATGCATTTGATTTTAAATTGGGATATATATGCCTCTCCTTATCTCTGGTTCATACATAGTAGTGTAGTACTATTTTCTTTGTCAAGTACTCTGTACTCCGGTAGTATCTTAATGTTTAACTGATTTTTGAGGGGATATTCAAATATTTAATTTATGTGGGACACTGTAATCAAAAGAGAACAAGGCGATCAGTCATCTGAAGACCCGATAGTTCTAAGAAAAGTTCACGTAGTTTGCATATGATGTCTTGTTCTCATCCATTGAAAGTTGGTGAAATTTTGTATTGACATCTTAAGACCACATATCAGGCAAAGGTTCATTAGCTTGATACATTTGTTGTGAATTCAGTAGTTCATTTAAGGTATGAAAGATGCTAATGTAACTTAGATGAGGCATCATGCCTATATTTGTTAGTGTTCGTGTTTTACTGTTGCCTTCTTCAGCCATGTTTTTGATCTCTGAGGTACTGAATCTTGCAGGTGAAAATGACAGTAAAACTGTCCTTGATGCCTTTTTCCTAGGGAAAGCTCTTGGTGAAGCACTGACTGAAAGAATTGAATCTACAGTTGGTGAATTTCTGAGCACCGTGGGCAGGTTGCAAGCTGAGCAACAAAAGCAAGTTCAAGAATTTCAGGTGAGGAACGAACTACTCTCTAGTATCAAAATGAAGGAGCATTCCCAGCCATATCTTTGTAAGTGAAATTCATGAAATTACCACACAAAGAGCGCAGTCTCTGACACTTGTATTTTTCTGCAGGAGGATGTGCTCGAAAGAGCCAAAAGAGCTAAGGAAAAAGCTGCTCGTGAATCCATGGAAGAGCAAGGGAGACTCATCCCCAACTCTAGCACAAGAAACGCAGCAGAAAGAAATGGTGCTAGTTCGAGTGCTATGGTTGGCCCCGTGAATCCAGCTGCTCCCATACGTCGTGTGGTCAATCCAGATGGCCCTGCATATGGTGGACTTGAAGACCGTGACACTGATTCAGATTCTCTTTCTAGTATAACCATAGATGAATGATTCTTGCCTAGAGAATATACATGTTAGAATGATACAGTTTTGTTCATGAAAAATACAGAAACTAGAGTAAATTTCACCTTATTATAAAGATCCATTAGAATATGTGATAATACAAAGTATTTGTTTCTTGATGTATGCTTTTGCCAAATTTTAATAGAGGCGAGCGGGTGGCTTCTGAGCCATTGTCATAGTTATTGTGGGACTTTGTTGGGGCAGTGCTTTAGTTGAAAGTTCGAGCAGAGGGAAAAAATCGATTAGGGGTAGCGAGATTTAGGATGAAGTGCTTGTTAGAGATAATGCAACTTGTGAATAAAGCTCCAAAATCAAAATAGTTGGGCTAATTAACAAGGGGAAGGGGCGAAGCTTATAGAAGACAAAGATAGAGCAATTAATGGGGATAACATCCGTCATTGTATGTTAATCCATCCACCCACTAGAGCAGTTTACAGGGGAA

mRNA sequence

GTAGTGAACAAAAACCAAAAAGAAAAATCAAGAGATTTGTTGAACACTTGAACCGTTGGTACTTGGTAGAACCATAAAAATTTGTAGAACTTTGCAACAGACTCAGAAATTAGCACCAAAAAAAAGACTCAGAAATGATGGTAGGTGGAGTTTCATCTTCAGTTACCCAGCAATCTACTTCTTGTTCACCATTAAACTCCCTTTTTCAAAATCGTACAATTTGCTCAAACTCCCAATTTCCATCACTTTTGATTGCTAATTACCGACACAATCATCTTCCTACTTTTCCACAACTTTCCTTCTCCTCTCGTTCTCAATCCCCAAAACCCATTTACTGCAGCAATTCCCCTGGCGCTGGTGAAAATGACAGTAAAACTGTCCTTGATGCCTTTTTCCTAGGGAAAGCTCTTGGTGAAGCACTGACTGAAAGAATTGAATCTACAGTTGGTGAATTTCTGAGCACCGTGGGCAGGTTGCAAGCTGAGCAACAAAAGCAAGTTCAAGAATTTCAGGAGGATGTGCTCGAAAGAGCCAAAAGAGCTAAGGAAAAAGCTGCTCGTGAATCCATGGAAGAGCAAGGGAGACTCATCCCCAACTCTAGCACAAGAAACGCAGCAGAAAGAAATGGTGCTAGTTCGAGTGCTATGGTTGGCCCCGTGAATCCAGCTGCTCCCATACGTCGTGTGGTCAATCCAGATGGCCCTGCATATGGTGGACTTGAAGACCGTGACACTGATTCAGATTCTCTTTCTAGTATAACCATAGATGAATGATTCTTGCCTAGAGAATATACATGTTAGAATGATACAGTTTTGTTCATGAAAAATACAGAAACTAGAGTAAATTTCACCTTATTATAAAGATCCATTAGAATATGTGATAATACAAAGTATTTGTTTCTTGATGTATGCTTTTGCCAAATTTTAATAGAGGCGAGCGGGTGGCTTCTGAGCCATTGTCATAGTTATTGTGGGACTTTGTTGGGGCAGTGCTTTAGTTGAAAGTTCGAGCAGAGGGAAAAAATCGATTAGGGGTAGCGAGATTTAGGATGAAGTGCTTGTTAGAGATAATGCAACTTGTGAATAAAGCTCCAAAATCAAAATAGTTGGGCTAATTAACAAGGGGAAGGGGCGAAGCTTATAGAAGACAAAGATAGAGCAATTAATGGGGATAACATCCGTCATTGTATGTTAATCCATCCACCCACTAGAGCAGTTTACAGGGGAA

Coding sequence (CDS)

ATGATGGTAGGTGGAGTTTCATCTTCAGTTACCCAGCAATCTACTTCTTGTTCACCATTAAACTCCCTTTTTCAAAATCGTACAATTTGCTCAAACTCCCAATTTCCATCACTTTTGATTGCTAATTACCGACACAATCATCTTCCTACTTTTCCACAACTTTCCTTCTCCTCTCGTTCTCAATCCCCAAAACCCATTTACTGCAGCAATTCCCCTGGCGCTGGTGAAAATGACAGTAAAACTGTCCTTGATGCCTTTTTCCTAGGGAAAGCTCTTGGTGAAGCACTGACTGAAAGAATTGAATCTACAGTTGGTGAATTTCTGAGCACCGTGGGCAGGTTGCAAGCTGAGCAACAAAAGCAAGTTCAAGAATTTCAGGAGGATGTGCTCGAAAGAGCCAAAAGAGCTAAGGAAAAAGCTGCTCGTGAATCCATGGAAGAGCAAGGGAGACTCATCCCCAACTCTAGCACAAGAAACGCAGCAGAAAGAAATGGTGCTAGTTCGAGTGCTATGGTTGGCCCCGTGAATCCAGCTGCTCCCATACGTCGTGTGGTCAATCCAGATGGCCCTGCATATGGTGGACTTGAAGACCGTGACACTGATTCAGATTCTCTTTCTAGTATAACCATAGATGAATGA

Protein sequence

MMVGGVSSSVTQQSTSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQLSFSSRSQSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQKQVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAPIRRVVNPDGPAYGGLEDRDTDSDSLSSITIDE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo04505	Spo04505	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo04505.1	Spo04505.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04505.1.exon.1	Spo04505.1.exon.1	exon
Spo04505.1.exon.2	Spo04505.1.exon.2	exon
Spo04505.1.exon.3	Spo04505.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04505.1.utr5p.1	Spo04505.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04505.1.CDS.1	Spo04505.1.CDS.1	CDS
Spo04505.1.CDS.2	Spo04505.1.CDS.2	CDS
Spo04505.1.CDS.3	Spo04505.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04505.1.utr3p.1	Spo04505.1.utr3p.1	three_prime_UTR

Homology

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BLAST of Spo04505.1 vs. NCBI nr
Match: gi|902225287|gb|KNA20019.1| (hypothetical protein SOVF_056300 [Spinacia oleracea])

HSP 1 Score: 399.1 bits (1024), Expect = 5.000e-108
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1


		  
Query: 1   MMVGGVSSSVTQQSTSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQLSFSSRS 60
           MMVGGVSSSVTQQSTSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQLSFSSRS
Sbjct: 1   MMVGGVSSSVTQQSTSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQLSFSSRS 60

Query: 61  QSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQK 120
           QSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQK
Sbjct: 61  QSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQK 120

Query: 121 QVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAP 180
           QVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAP
Sbjct: 121 QVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAP 180

Query: 181 IRRVVNPDGPAYGGLEDRDTDSDSLSSITIDE 213
           IRRVVNPDGPAYGGLEDRDTDSDSLSSITIDE
Sbjct: 181 IRRVVNPDGPAYGGLEDRDTDSDSLSSITIDE 212

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BLAST of Spo04505.1 vs. NCBI nr
Match: gi|731347332|ref|XP_010684932.1| (PREDICTED: uncharacterized protein At4g13200, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 231.9 bits (590), Expect = 1.100e-57
Identity = 148/211 (70.14%), Postives = 166/211 (78.67%), Query Frame = 1


		  
Query: 6   VSSSVTQQSTSCSPLNSLFQNRT-ICSNSQFPSLLIANYRHNHLPTFPQLSFSSRSQSPK 65
           +SSS++ QS+S S   SL QNRT I SNSQ  SL I NY HN+      LS SSRS SPK
Sbjct: 7   ISSSLSPQSSSPS-FYSLIQNRTTIFSNSQLSSLFIPNYPHNY-----HLSLSSRSHSPK 66

Query: 66  PIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQKQVQE 125
           PIYC+ SPG+GE+DSKTVLDAFFLGKALGEALTERIESTVGEFLST+GRLQ+EQQKQV E
Sbjct: 67  PIYCTTSPGSGESDSKTVLDAFFLGKALGEALTERIESTVGEFLSTIGRLQSEQQKQVLE 126

Query: 126 FQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAM---VGPVNPAAPI 185
           FQEDVLERAK+AKEKAARE++EEQGRLIPN ST NAAER G S S M    G  N  AP 
Sbjct: 127 FQEDVLERAKKAKEKAAREALEEQGRLIPNFST-NAAERYGVSPSDMASRTGSTNLTAP- 186

Query: 186 RRVVNPDGPAYGGLEDRDTDSDSLSSITIDE 213
             +VNP+GPA G  EDR  DSD+LS+I+IDE
Sbjct: 187 TPLVNPNGPASGADEDR-FDSDALSNISIDE 208

[Close]

BLAST of Spo04505.1 vs. NCBI nr
Match: gi|976918653|gb|KVI03822.1| (hypothetical protein Ccrd_017876 [Cynara cardunculus var. scolymus])

HSP 1 Score: 134.4 bits (337), Expect = 2.300e-28
Identity = 85/148 (57.43%), Postives = 103/148 (69.59%), Query Frame = 1


		  
Query: 68  CSNSPGA---GENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQKQVQE 127
           CS++PG    GEN+SK VLDAFFLGKA  EAL ERIESTVGEFLSTVGRLQAEQQKQVQE
Sbjct: 66  CSSTPGGPAPGENESKQVLDAFFLGKAFAEALNERIESTVGEFLSTVGRLQAEQQKQVQE 125

Query: 128 FQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAPIRRV 187
           FQ++VLERAK+AKEKAARE+ME QG L+  S++ +      A+ +       PAA     
Sbjct: 126 FQDEVLERAKKAKEKAAREAMEAQG-LVXKSASSSIISSPTANKTTNGSGTEPAAVDEPT 185

Query: 188 VNPDGPAYGGLEDRDTDSDSLSSITIDE 213
           V+P   + G   DR+  +D L  I ID+
Sbjct: 186 VSPSSSSSG--SDRNGSTDPLLGIQIDD 210

[Close]

BLAST of Spo04505.1 vs. NCBI nr
Match: gi|590714025|ref|XP_007049801.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 131.3 bits (329), Expect = 1.900e-27
Identity = 75/101 (74.26%), Postives = 87/101 (86.14%), Query Frame = 1


		  
Query: 71  SPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQKQVQEFQEDVL 130
           +PG+G+N+S+ VLDAFFLGKAL EAL ERIEST+GEFL  VGRLQAEQQKQVQ+FQE+VL
Sbjct: 71  APGSGDNESRNVLDAFFLGKALAEALNERIESTIGEFLGAVGRLQAEQQKQVQDFQEEVL 130

Query: 131 ERAKRAKEKAARESMEEQGRLIPNSSTRNAAE-RNGASSSA 171
           ERAKRAKEKAARE+ME QG LIP S+  NA    NGA+S+A
Sbjct: 131 ERAKRAKEKAAREAMEAQG-LIPKSTAVNATSVTNGAASNA 170

[Close]

BLAST of Spo04505.1 vs. NCBI nr
Match: gi|641847020|gb|KDO65901.1| (hypothetical protein CISIN_1g028159mg [Citrus sinensis])

HSP 1 Score: 131.0 bits (328), Expect = 2.500e-27
Identity = 96/195 (49.23%), Postives = 124/195 (63.59%), Query Frame = 1


		  
Query: 15  TSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQ---------------LSFSSR 74
           TS SP  +     T+CS+ Q  S   A++  N L + P                L F   
Sbjct: 5   TSASPPTT-----TLCSSIQ--SKTQASFFGNSLSSVPVIPRTLTCSSNLKLNGLGFFGG 64

Query: 75  SQSPK--PIYCSNSP------GAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTV 134
           ++SP+  P+ C+++       G+G+ +S+TVLDAFFLGKA+ EAL ERIES VGEFLSTV
Sbjct: 65  AKSPRRIPLQCNSTTKPGPPSGSGDGESRTVLDAFFLGKAVAEALNERIESAVGEFLSTV 124

Query: 135 GRLQAEQQKQVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSA- 182
           GRLQAEQQKQVQEFQEDVLERAK+AKEKAARE+ME +G L+P S T NA   + A+S++ 
Sbjct: 125 GRLQAEQQKQVQEFQEDVLERAKKAKEKAAREAMEVRG-LVPKSRTVNATPVSAATSASP 184

[Close]

BLAST of Spo04505.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RM61_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_056300 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.500e-108
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1


		  
Query: 1   MMVGGVSSSVTQQSTSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQLSFSSRS 60
           MMVGGVSSSVTQQSTSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQLSFSSRS
Sbjct: 1   MMVGGVSSSVTQQSTSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQLSFSSRS 60

Query: 61  QSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQK 120
           QSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQK
Sbjct: 61  QSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQK 120

Query: 121 QVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAP 180
           QVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAP
Sbjct: 121 QVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAP 180

Query: 181 IRRVVNPDGPAYGGLEDRDTDSDSLSSITIDE 213
           IRRVVNPDGPAYGGLEDRDTDSDSLSSITIDE
Sbjct: 181 IRRVVNPDGPAYGGLEDRDTDSDSLSSITIDE 212

[Close]

BLAST of Spo04505.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVR3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g167030 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.300e-58
Identity = 148/211 (70.14%), Postives = 166/211 (78.67%), Query Frame = 1


		  
Query: 6   VSSSVTQQSTSCSPLNSLFQNRT-ICSNSQFPSLLIANYRHNHLPTFPQLSFSSRSQSPK 65
           +SSS++ QS+S S   SL QNRT I SNSQ  SL I NY HN+      LS SSRS SPK
Sbjct: 7   ISSSLSPQSSSPS-FYSLIQNRTTIFSNSQLSSLFIPNYPHNY-----HLSLSSRSHSPK 66

Query: 66  PIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQKQVQE 125
           PIYC+ SPG+GE+DSKTVLDAFFLGKALGEALTERIESTVGEFLST+GRLQ+EQQKQV E
Sbjct: 67  PIYCTTSPGSGESDSKTVLDAFFLGKALGEALTERIESTVGEFLSTIGRLQSEQQKQVLE 126

Query: 126 FQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAM---VGPVNPAAPI 185
           FQEDVLERAK+AKEKAARE++EEQGRLIPN ST NAAER G S S M    G  N  AP 
Sbjct: 127 FQEDVLERAKKAKEKAAREALEEQGRLIPNFST-NAAERYGVSPSDMASRTGSTNLTAP- 186

Query: 186 RRVVNPDGPAYGGLEDRDTDSDSLSSITIDE 213
             +VNP+GPA G  EDR  DSD+LS+I+IDE
Sbjct: 187 TPLVNPNGPASGADEDR-FDSDALSNISIDE 208

[Close]

BLAST of Spo04505.1 vs. UniProtKB/TrEMBL
Match: A0A103Y795_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017876 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.600e-28
Identity = 85/148 (57.43%), Postives = 103/148 (69.59%), Query Frame = 1


		  
Query: 68  CSNSPGA---GENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQKQVQE 127
           CS++PG    GEN+SK VLDAFFLGKA  EAL ERIESTVGEFLSTVGRLQAEQQKQVQE
Sbjct: 66  CSSTPGGPAPGENESKQVLDAFFLGKAFAEALNERIESTVGEFLSTVGRLQAEQQKQVQE 125

Query: 128 FQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSAMVGPVNPAAPIRRV 187
           FQ++VLERAK+AKEKAARE+ME QG L+  S++ +      A+ +       PAA     
Sbjct: 126 FQDEVLERAKKAKEKAAREAMEAQG-LVXKSASSSIISSPTANKTTNGSGTEPAAVDEPT 185

Query: 188 VNPDGPAYGGLEDRDTDSDSLSSITIDE 213
           V+P   + G   DR+  +D L  I ID+
Sbjct: 186 VSPSSSSSG--SDRNGSTDPLLGIQIDD 210

[Close]

BLAST of Spo04505.1 vs. UniProtKB/TrEMBL
Match: A0A061DVB5_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_002978 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.400e-27
Identity = 75/101 (74.26%), Postives = 87/101 (86.14%), Query Frame = 1


		  
Query: 71  SPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQQKQVQEFQEDVL 130
           +PG+G+N+S+ VLDAFFLGKAL EAL ERIEST+GEFL  VGRLQAEQQKQVQ+FQE+VL
Sbjct: 71  APGSGDNESRNVLDAFFLGKALAEALNERIESTIGEFLGAVGRLQAEQQKQVQDFQEEVL 130

Query: 131 ERAKRAKEKAARESMEEQGRLIPNSSTRNAAE-RNGASSSA 171
           ERAKRAKEKAARE+ME QG LIP S+  NA    NGA+S+A
Sbjct: 131 ERAKRAKEKAAREAMEAQG-LIPKSTAVNATSVTNGAASNA 170

[Close]

BLAST of Spo04505.1 vs. UniProtKB/TrEMBL
Match: A0A067FRT7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028159mg PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.800e-27
Identity = 96/195 (49.23%), Postives = 124/195 (63.59%), Query Frame = 1


		  
Query: 15  TSCSPLNSLFQNRTICSNSQFPSLLIANYRHNHLPTFPQ---------------LSFSSR 74
           TS SP  +     T+CS+ Q  S   A++  N L + P                L F   
Sbjct: 5   TSASPPTT-----TLCSSIQ--SKTQASFFGNSLSSVPVIPRTLTCSSNLKLNGLGFFGG 64

Query: 75  SQSPK--PIYCSNSP------GAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTV 134
           ++SP+  P+ C+++       G+G+ +S+TVLDAFFLGKA+ EAL ERIES VGEFLSTV
Sbjct: 65  AKSPRRIPLQCNSTTKPGPPSGSGDGESRTVLDAFFLGKAVAEALNERIESAVGEFLSTV 124

Query: 135 GRLQAEQQKQVQEFQEDVLERAKRAKEKAARESMEEQGRLIPNSSTRNAAERNGASSSA- 182
           GRLQAEQQKQVQEFQEDVLERAK+AKEKAARE+ME +G L+P S T NA   + A+S++ 
Sbjct: 125 GRLQAEQQKQVQEFQEDVLERAKKAKEKAAREAMEVRG-LVPKSRTVNATPVSAATSASP 184

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BLAST of Spo04505.1 vs. ExPASy Swiss-Prot
Match: Y4320_ARATH (Uncharacterized protein At4g13200, chloroplastic OS=Arabidopsis thaliana GN=At4g13200 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 1.500e-24
Identity = 66/103 (64.08%), Postives = 81/103 (78.64%), Query Frame = 1


		  
Query: 59  RSQSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQ 118
           RS S +    +    +GEN++K+VLDAFFLGKAL E + ERIESTVGE LST+G+ QAEQ
Sbjct: 49  RSTSLRSNCSTKGTDSGENENKSVLDAFFLGKALAEVINERIESTVGEVLSTIGKFQAEQ 108

Query: 119 QKQVQEFQEDVLERAKRAKEKAARESMEEQGRLI--PNSSTRN 160
           QKQVQE QE+VLERAK+AKE+AARE+MEEQG +   P + TRN
Sbjct: 109 QKQVQEIQEEVLERAKKAKERAARETMEEQGLVASKPVAITRN 151

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BLAST of Spo04505.1 vs. TAIR (Arabidopsis)
Match: AT4G13200.1 (unknown protein)

HSP 1 Score: 114.4 bits (285), Expect = 8.700e-26
Identity = 66/103 (64.08%), Postives = 81/103 (78.64%), Query Frame = 1


		  
Query: 59  RSQSPKPIYCSNSPGAGENDSKTVLDAFFLGKALGEALTERIESTVGEFLSTVGRLQAEQ 118
           RS S +    +    +GEN++K+VLDAFFLGKAL E + ERIESTVGE LST+G+ QAEQ
Sbjct: 49  RSTSLRSNCSTKGTDSGENENKSVLDAFFLGKALAEVINERIESTVGEVLSTIGKFQAEQ 108

Query: 119 QKQVQEFQEDVLERAKRAKEKAARESMEEQGRLI--PNSSTRN 160
           QKQVQE QE+VLERAK+AKE+AARE+MEEQG +   P + TRN
Sbjct: 109 QKQVQEIQEEVLERAKKAKERAARETMEEQGLVASKPVAITRN 151

The following BLAST results are available for this feature:

BLAST of Spo04505.1 vs. NCBI nr
BLAST of Spo04505.1 vs. UniProtKB/TrEMBL
BLAST of Spo04505.1 vs. ExPASy Swiss-Prot
BLAST of Spo04505.1 vs. TAIR (Arabidopsis)

BLAST of Spo04505.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902225287\|gb\|KNA20019.1\|	5.0e-108	100.	hypothetical protein SOVF_0563...	[more]
gi\|731347332\|ref\|XP_010684932.1\|	1.1e-57	70.1	PREDICTED: uncharacterized pro...	[more]
gi\|976918653\|gb\|KVI03822.1\|	2.3e-28	57.4	hypothetical protein Ccrd_0178...	[more]
gi\|590714025\|ref\|XP_007049801.1\|	1.9e-27	74.2	Uncharacterized protein isofor...	[more]
gi\|641847020\|gb\|KDO65901.1\|	2.5e-27	49.2	hypothetical protein CISIN_1g0...	[more]

BLAST of Spo04505.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RM61_SPIOL	3.5e-108	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BVR3_BETVU	7.3e-58	70.1	Uncharacterized protein OS=Bet...	[more]
A0A103Y795_CYNCS	1.6e-28	57.4	Uncharacterized protein OS=Cyn...	[more]
A0A061DVB5_THECC	1.4e-27	74.2	Uncharacterized protein isofor...	[more]
A0A067FRT7_CITSI	1.8e-27	49.2	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo04505.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
Y4320_ARATH	1.5e-24	64.0	Uncharacterized protein At4g13...	[more]

BLAST of Spo04505.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G13200.1	8.7e-26	64.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 123..150 scor
None	No IPR available	PANTHER	PTHR35745	FAMILY NOT NAMED	coord: 1..207 score: 4.0
None	No IPR available	PANTHER	PTHR35745:SF1	SUBFAMILY NOT NAMED	coord: 1..207 score: 4.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010287	plastoglobule