Spo04683.1 (mRNA) | SpinachBase

Overview


Name	Spo04683.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Inner membrane import protein Tic22, putative
Location	chr1 : 6671834 .. 6680526 (+)
Sequence length	1433

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGCCCCTTTTCCTTTTGTTATAACACGGTGTTAACTGCTAAGTGCTAACCGCAGAAACAACGTTCAATGGTCGAAGGAAGTGGAATGGACTCTTCAACACCAGCAACCGGTGGCCGCCCAAATCCACTACTATCAGTCTCCACGTTTATGCACCGCCTCGGCGCTGAACTCACCACCCGCCTTGACGAAAGCCGCCGACTCGCCGGAAATTTCATCTCCACTCTATCTCCAGCGTCACCTCGTGGCCGCACTACCACTCCTGTTTCTCTCTCCTTGCCTTTCGCCTCCGTTGGACAGGCTAAGCCGTTGCAAGACGTCGCTTTGAGCACCGACCATGTGGCGAAAAGCCTCGTCGGCACCTCCGTTTTTACAGTTAGCAATACGAACAATGAATTTGTGTTGATTTCCGACCCTAATAATGGCGCTAAGTCTATTGGTTTGCTTTGCTTTCGCAAAGAGGATGCCGAGGCTTTTCTTGCTCAGGTTTTGCTTCGCTGTTTCTCTCTCCTTCGTTGAATTTCAGAATTATCAGTTGAATTTGGGAATTGAATTTGCTTTTTTTGGCACTGAAATTTCAGGTTCAGTTGAGGAGGAGGGAGCTGCGGAGTCAGGCTAAGATTGTTCCAATTAGCCTAGACCAGGTGACTAGTGCTAATTACTTCGTATTTGGCACTAACTCCGTCCGGAATTAATTTCACGTTACCAGTTAAACTTACATTATAAGTCATTATTAATTCCGGACCTAGGGAATTATGCATAGTTTTGGCTTACAAGATACAGTCTGCTAAAATAAAAAGTAGTGAACACAATCAATTTTAGTTGGTTGTGTTCCTTTCATTGAGATAGTGAAATTTGTGAATATGACTGTGATTGTTTGATGGTCTTGTTTTGATTGAGTGTTTAGAGAGATAGTTTCCATGGTAAAAGGGAGTTGTTGGTGGGTTTGATAGGGTGATATGGAGACGGCTGTAGATATGTTTGTTATGTGACCGATGAGATGCCATAACAGTGCATAACTGTTGCACTGTTGGCAATGGTAAGAAAGAGAAAATAAAACATCGAACGTTGTTACCGCTAATTGTTTGCTTGTAGCCTGACCCAATGAAAGACTTACGAATGTCGGGTCTTTTATGCTTTATATAAAGATACTCAGTACTCATCCACCACAGCAGGATCCTCACTTGGTGTTGTTTACAACCCTAGAAATTTGTGAAGTGCTGTTGTTGGGATAGGGAAATGATTCAGATAGATGATATTTAAGTGGTTAGTTCTATAATTATTTTCTGTTTTGACGACGCTTGAGATTTTTTGGCGACTTTGCTGGTATACTAAATTAGGGTTTTGACTTTTAAATTGTCGGAAATAACGTGTTAAAACAAATTGTAGCACTAACCACTTAAATTGCCCCTGTTGTATATTGTCAGTGTCCAAAATTATCCTTTGCCTTTCATATTTTAGTTGGTCACCAATGTGTGAATTTCCACCTGTATAAGAGGCATTGGGCAGTGTTTTAATGGTTAATAATTCATGATGAATTGCATAAAACAGATGGGTGAAAATCAAATCTAAAGGTGTCGTTGCAAGTTAGCATATGTAACTATGTAAGAGGTGGTTACAGACATTTTTCTTGTAGTCTGCGAAAGTTTAGTTTGTGTGTCTCTTGATTAGTTGATTGCACATTATTGTTCATCTTTCCTCCCTTATTCTGTTCCTCCTTTTCCTTTCCTCCTTTTCCTCTCAGGAGTCTCGGGTCCTGCACCCCCCTTCTCTTTTACTTCATGTTTTTTCCTTTATGATTTCTTCCAAACAGTGAACATTTGTGCATACATGTTAAACTTTCTTTTCCTTTATAATTTAAACAGTAAACACTTGTGCAGGTGTACATGTTAAAGGTTGAAGGAATTGCATTCCGATTCTTGCCTGATCCGGTCCAAATAAAGAACGCACTAGATGTAAGCTTTCTGTTTAAGCGATTTGTTTGTTGAAGTTGGTTGTTAACTATTTAACTGAATCTGATCCATATGGAGGGTCTTAAGCTCTTAACAGTTTTGTAAAAGGACTTAATGGCACTAAGTGTTTCCCTAATTTGAACTCTCTTCTTTCCGGATAAACTAGAGTCTAAATGTGTTTAAAACTGCAGAACTTAAAAGTTAGTATTAACATTACCTTCGCTGGGTAAGAATAAATCTAATGGTCTTACTTTCAGGTATTTGATATAAGTTACCAATATTTTGAGCATGCCTGGATTGTACGTACTGTATTAAAGGGGTAAATAAAAACAGCCTAAAGAAATGAAGGTTGTTGCATGGTGGAATGGAAGAAACTAGCTGGTGAGCATCTGAAGAAGGGGGAGGGATGAAGGAATATTTACCCTTTTTTTGGGGGTAACAGTTACGCACCATTCCCCTAGGGAAACTATTACCTAAAATGGGGGTAACGATTCCCTCATCCCTTCCTCCTTTCTCACATCCACCACTACATTTTCTCCTCTATCACATGCTCCACTCACCTTCTTTCTCCTATTACCTCTTCAATGCATTATTCCCAAATTTTAATCCAAGTGTGTCCTCAAATTATCAAAAAGGGAACTAGGCTTAGCTTCACTCACTAAGTCAAGGGCTCTTGAAGGTTTTAGCTTCACTCTCTGACTTCCAAAAGAAAACAGACGAAATTTTTTCCAATGGCAAATTGAAAATTAGGTACTAATTGTTAGGCTATATTTGAAATAAGATAAGAACAAACCCCTCTTCTAAATTGATAAATTTCCTCGTAAATTAGCTGCTGTCCTCTCCCATTTTTCAAGATTAGGAAAATTAGGTGTTTCAAGTTCTCCATTATCTTCGAAATATGTTTGCAATTATTGCACTTTCTGTTATACTGAACTTTTTGATATGCCCTTCCATATTCATGTTGGTATCGGACGCATCGTGTTGGTTCTTAGGTAAAGTCCTTCAGATATACTTCCTCCGTCCCTTTTTATTCTTTACGTTTGATATCATGCATGCGATTTAACAACTATTTAATATTCATACAAATTCCTCCTTTTTTTTTATCAAACAATGCAAATTACGTTTATTGATAGTATTTTCACTTTTATCCAAAACTAGCTCTTGAGCCCGTTCAAAGAACAGGAAATTAGTGGTTCTTTAAGCGTCTTTTAAAGTTCTAATTTTTTTGAGGCCCTAGGACTTGTGATTTTAGCGGTAATATATGTATGGTTTAAATAAATGTGAATTTTGAAAGTTGAAAGAATATATATATACATTAAATTAAATGGTGAATTAATATTGGGTGTTAAAGAGGGAGATGAAATGGATGGGGTTGAATGTATAATGAATTAATTTTGAATTGACGTTGAAGGATGAAGATGGAGTGGAAGAGGCGTTAGAGGTGTAAAATATAGGAAACAACAAAATGAACAATTGAAAAAAAAATTGATGGAGGAAAAGAAGGGATGATATGTGTCATTTAATCGTCTATGGTTTTTCTCTTTATAGACTAGGTATAGATATAACATTGGGAAGTGTGAGAGATTTAATGTTTCAATGGGAAAATGTGAAAGGTTTAGTATCCCAATGATTTTAATTAATTAAAATAATCAAGTGCACGTTTTTTGACAGAGTATTAAGGACATTAATGATACAATATAAAAGGAAAGATTCTAAATGTAAAGATTAAAATGGGACACTAGAAATGGAAAGCATAAAGAATAAAAAGGGACGGAGGGAGTAATAGATAAAACAAGGTGTGAAAACAATAGACATATTCGTGTCTGATACACTCTAACAAAATCCCCCCTTGGTGGTTATGGTTCTTAACAATAGTGGACACTTGCTGTGTTTCCATGGATCTTTATTCTTTAACATCAGATTTGGATATTTAAAGTTTTGGGTGTTAAGCCTTTGAGAACGTAATTGCTCTTCAAATGCATCCCATGTTAGCACACTAATGTATAGGAAGTACGGCATATAAAAGGCTAGGGTATACAAAGGCTGCAAATTATGATATCTTTATCTGCCTGTCATAGGAATACTATATAAATATGTTTTTCTGAGTGAGCTATATAAATATCTGATCCTACTTTATTCACAATAGCTTACTTTTTTTGCTGCAGTTGAAAGCATCGGAGACTAAAAGTGGGTTTGACGGTGTTCCTGTGTTTCAGGTGTGCTAAATTTCTCTATGTTTCTACCAATTCGTGGTTACCAGCTAAGATTCATTCATGCCTGATCATAAGTTTAATTTGCACATTCTTTCAGTTGCCCTTGTAGGTTGTATAATTCCCGTTTATAAAATTGCATAGGCAGTTGTACTGAATTCCCGTTCGTCCTTTTCTCTAATCATGTATGTTTCGTTTAGGCCACTCTCTCTAATAGGAGTCACAATTTTATTGATGTTTGTTATTTAGACTCTGATCATGCGTATATAAAACTGCGTAGGTAGTTGTAGAAGCAATCAAAAGAGTGATGGTACTGTCTCGATTTCATGCTGTCTTAACTGTGTCTATACCATATAGTATGTTTTTCTTACAGAACTAAAGTTGCTTTCAAATAGTCAAATAAGGATGTTTAAAGTTTAGGAAACGACTATTGTTTTAGTTTAAGAATCAAAATAGTACTTAGCATGGTTGCACAAGACTGGGGAAAGACCGAAAGACTCGGTTAAGCTTGCTAACCTGATGGCCCTGGTTACCTGGAATTTCTATTTAGTGTTTATCCTATTTTACTCATTTAAGTTCTGGCTACGTGTTTGAACATAGATCTCAAACTTCAGTTGGTTTTGTGGCATGTTAGGATTTTATATGGAAAACCTTGTTGTCGAGGCACCATTCTCATAGAATATTTGTTATTTTTGGTGTTTGGTTTAACATAGGTTTGGGGGCATGACACTTAAACATTAAGTCCTCAAAAACCTCTCTTAAAGGTGGTTGTTTTAGTGTAGTTATTGGTGTTAATCTTCAGTTATTTTTATTTTCTAGTCTTGAAGCAGCTAGTTCTTCATCCAGCTGGTTGAAACAGCCCGTTCAGTCTTACTTTTGCGACCTTCTAATGCAAAGATTTCTCTATTCTCTACAACTAGGAAAGATTTTAATAATTTGTAGACATGGTTGAGATCTTTTCTTTATAAGCGCCAAACTGTATCAGACTTTCCTTTTAGTTGCCAGTTGCCACCTCTGTTACCACTTACCACCTTTTGCAACTGTTGGATATGCCTTTAATATGTCTGTCTCTTCGAGTGACCCAGCACAGGGGTTTTGCTCCCCAGTGAGTTGGGGGTCCAGGAGGAGAAGCGCCCCGGTTTTGGGAAACTTGCGGTGCGCATTTTATTGGGCTACAGTTTTTTGTTTAGGATTGTTTGTCTGGCCTATCAAGTTTCTGTCTGAGAGTAATATAAACTCCCTAGTTCTTCAAGTGGCCCAATTCTGTGATCAGTTTCCTCAAGGTTAATAAAGCTTCCTCTCCTCTGCATCTGGACGTAGCTAACACATATTAGTGAACCACATACATTTGTGTTGTTGTTTGTTGTTTTAACTTATCTTTCTCGCACCCGTTATAATATAAACCTTTTGGGGAATGAAATTGGCTATTGATGGCAAGACGCAAGAGATTATATTTGGTCACTCCTGTTCTCTTCTGCATATCTCAACCAGGTTCAACCCTCGTCGTGACTTCAGTCCCAAGATTCTCAACCAGATTCAACCCTCGTGACTTCAATCCCAAGATTCTTAAGATTGATGACATGTAATTAAAATAAGTGTTGCAAGATGTAATTGTTTCGTTCTTCTATTAGCATTTCTGATTCCACTTGTTATAGTAGCATTTTTTGTATGGTAATCTAAGAGTCTTATTGTGTTTGGTTTCCTTAGTCAGCAATATGTGAATATTATTGCTCAAGAATCACGATTAGTTCTCTCTCTTAATACTTCTCTTGAAACCTAGATTTATTACTTATTCATATGTGCATGTGAATTGATTTTCCCTCATTTTTAACTTTTTTTTTTTTAATATTGTTGACCGATGCAGTCAGATCTTCTGGTTGTGAAGAAGAAAAATAAGCGGTACTGCCCTATTTATTTTCGAAAGGTCAGTTGTTCATTAGTTTTAATGGTATGCTCATCAATGAGAATTGCCTCAACGCTGATGTTAATGCTTCTTTGCTGCAGGAAGATATAGAGAAAGAACTGTCTCAGAGGGCATCGCGAGGGCGGGGACCTTCTCAGAACATAGTGGTATATTTTAAACCGGTCTCCATTTTATGTATGAAACAATTAGAAATGCTGATTTTGGTATAGTTTTGTTTGTACAAAATCAAGAGTTGGCTCTCACCCAAAACACATGAAAAAAAAGTCCCTTTTTCTTGTAAATCAAGGGTTTTCATATGCTTCTGTCTATGTTAGTTAAGGAACGATAAACTATATGTATTCCCTCTCCCCCCGCCTAGCAAGTAAAATTCACATGTTTCCAAGAGGGAGTTTGGAGACAGATTTGCCAGTTCTGGTCTGCTTTTAAGACTCGAGTGGACTTGATGTTCAAGTGCCAGAAATTTAAATTGCACGGCCATGAAGCCTGCTCACATATAAAATTTTATACTTCTGGAGCATCTTCCATTGTTTTTTATTCTTAGCTTCCCAGCCTCTGGTGTCTCCAGCTTCAACTTCGTAGTTATGCTTCTTAGAAATCCATGTTCTTTTCTTGCCTTTGTAATTAGATGTTGCTGCAGCCTGAGTTGTTTGTCCCTCTTTTGTACCCATTCATTTTGGTGGGGAGAGTGGTGAAGAAAAAACAATCAGAAGAGCAACAGAGGTCACTGTCCTATGTGTTAATCTGGATGTCCTGTGACTCCTATCTTGTAATTCTCCTTGCATGAAAAAATGACGAGCAAGGATATTGTTTTCTTTTTGCTACATTAAAGAGCATGTTTTCTCTGTATTAATCTCTCCTCCTCTTCAGTCCTGGAGCTACATGCAAGATATAGCAGTACCTGGCTTGATAGAGACCTTCCTGTACTGTTAATTTTTTAAAATAAATGTTGGTTCTTGCTGCTGTTCGGAAATGAAAAGCCCCCTTCATAATTTCATATAATCATACACCATTCCAAACCTTAAATGAGTAAATTTTGTGTACGCACGTGTATAAGAAGCAGGAATTATGGCTGAAAGTCCTTGCTGTTCATTCTAAGTTAGTTTTCTTGTGAATCAAAACTCCCAAGACTGATTTTTTACTTTCATCCTTTTTTTGAATTGACAATTTGATCTGACTTGACATGAGTGGAGTCATCTGTGGCTTCTGCCATCCGTTAAAACTTCCATTTGAAGTTTTGAACTATATCTTGCCTTGCCCTAATTTTTTTGTCTTATTTACACAATCCATGGATTTTCCAACTTGAGAATATAAGATGCAGATTTCACAGGAAGAAGAGAGAATAAATGTTTGTTCATTTTGCTGCTGCTGTCAGTAGGATACTTTTATCAGTTTATCTGATTTCTCCACAGATTCTTTGAAACATGATGTTTCAGTAATGCAGAATGATCAATAGGTTCTTTTGGCTCTTTATAAATTACCTTTGTATAGCGTTCAGCCGTTCACTCTGTTTCACGTTCTGTGTGTTCCTTTGCGAATAAGTTGTAGTCCATGACTCTATATCAATGTTTTAATTAACCTGATTGCTCTGTTTTGTTGCGGGTGTCAACAGGTTGGGAGTTTGGAAGACGTTTTGAAGAAAATGGAGGTAAAATATTGTGTTTTACCAGTTTGTGGCTATTCTTCTCCTGTTTTTTCTTTCTTTGAAGTAATTCTTTTTCATATCTATATGATTTCTTAGTCCCAACAAAATAGCGGTGGGGGAAATTCCCTTCACATGTTAATTAATTTGTCTCTAGTTTATGTTCTCCTTAGTTATGTTTGTGGATGTTGGTCACAGATAAACGAGAAGAATTCTGGCTGGGGCGATTTTATTTTTATTCCACCTGGTAAAAGCCATCTACAACATATTCAAGAGGTGGCAAAATAGCTTGATGGTGTGCATTTCTTCTGCCTGTAATTCTTGATTGAGAAGCAGAGAACGTACTGTGCAGCATTGAAGAATGAAGACTCGAGGTCTCTTCTTCATCTCTTTAAAGTTTAAACCCCACCCTAAAAAAAAACACCATTTTCTTTTCGGTTTCTGCTTTGAATGCTATTGTTCTATCAAGTTTGCAAGCTGCGATTTAAAAGAATGATATCAGTTTTCATGAAGCAGGTTTATCAAATGGCAGAAAATGGTGTCTGCATTTATCGCGGAGGATTTACACTTTATCTGCAATAGTTTAGTCATAGTTGTCATCCCATTCTTAAGTAAGGTAGATTTTGTTGATGGAAGAGAGTGGTGCACGTTTGACTGAATTAGATGGGTCTTCTTTGCTTGTTATTAACCTATATGTGCTTACATTCGGGCACTTGTTCATCATAATGATGTTTAATTTTCGTGTTAGTGTGCACTTCAGAATTTCATACAGTGTGCACTTAGCTGCTCGTTTCTGCACTTTTACTTTGAAGATTCTACACTGGCATTTGATTGTGTATCATGCTTGATCAAATCTTGGTTTGTTTGACAAAACGCACAGATATGCGATTATTCTTCTAATCTTGTACTACCTCTGTTCCTGGAAATTCTTTACACCTTGGAATATGTGCCCGAAGTATGAAAATTGAC

mRNA sequence

TATGCCCCTTTTCCTTTTGTTATAACACGGTGTTAACTGCTAAGTGCTAACCGCAGAAACAACGTTCAATGGTCGAAGGAAGTGGAATGGACTCTTCAACACCAGCAACCGGTGGCCGCCCAAATCCACTACTATCAGTCTCCACGTTTATGCACCGCCTCGGCGCTGAACTCACCACCCGCCTTGACGAAAGCCGCCGACTCGCCGGAAATTTCATCTCCACTCTATCTCCAGCGTCACCTCGTGGCCGCACTACCACTCCTGTTTCTCTCTCCTTGCCTTTCGCCTCCGTTGGACAGGCTAAGCCGTTGCAAGACGTCGCTTTGAGCACCGACCATGTGGCGAAAAGCCTCGTCGGCACCTCCGTTTTTACAGTTAGCAATACGAACAATGAATTTGTGTTGATTTCCGACCCTAATAATGGCGCTAAGTCTATTGGTTTGCTTTGCTTTCGCAAAGAGGATGCCGAGGCTTTTCTTGCTCAGGTTCAGTTGAGGAGGAGGGAGCTGCGGAGTCAGGCTAAGATTGTTCCAATTAGCCTAGACCAGGTGTACATGTTAAAGGTTGAAGGAATTGCATTCCGATTCTTGCCTGATCCGGTCCAAATAAAGAACGCACTAGATTTGAAAGCATCGGAGACTAAAAGTGGGTTTGACGGTGTTCCTGTGTTTCAGTCAGATCTTCTGGTTGTGAAGAAGAAAAATAAGCGGTACTGCCCTATTTATTTTCGAAAGGAAGATATAGAGAAAGAACTGTCTCAGAGGGCATCGCGAGGGCGGGGACCTTCTCAGAACATAGTGGTTGGGAGTTTGGAAGACGTTTTGAAGAAAATGGAGATAAACGAGAAGAATTCTGGCTGGGGCGATTTTATTTTTATTCCACCTGGTAAAAGCCATCTACAACATATTCAAGAGAAGCAGAGAACGTACTGTGCAGCATTGAAGAATGAAGACTCGAGGTCTCTTCTTCATCTCTTTAAAGTTTATCAAATGGCAGAAAATGGTGTCTGCATTTATCGCGGAGGATTTACACTTTATCTGCAATAGTTTAGTCATAGTTGTCATCCCATTCTTAAGTAAGGTAGATTTTGTTGATGGAAGAGAGTGGTGCACGTTTGACTGAATTAGATGGGTCTTCTTTGCTTGTTATTAACCTATATGTGCTTACATTCGGGCACTTGTTCATCATAATGATGTTTAATTTTCGTGTTAGTGTGCACTTCAGAATTTCATACAGTGTGCACTTAGCTGCTCGTTTCTGCACTTTTACTTTGAAGATTCTACACTGGCATTTGATTGTGTATCATGCTTGATCAAATCTTGGTTTGTTTGACAAAACGCACAGATATGCGATTATTCTTCTAATCTTGTACTACCTCTGTTCCTGGAAATTCTTTACACCTTGGAATATGTGCCCGAAGTATGAAAATTGAC

Coding sequence (CDS)

ATGGTCGAAGGAAGTGGAATGGACTCTTCAACACCAGCAACCGGTGGCCGCCCAAATCCACTACTATCAGTCTCCACGTTTATGCACCGCCTCGGCGCTGAACTCACCACCCGCCTTGACGAAAGCCGCCGACTCGCCGGAAATTTCATCTCCACTCTATCTCCAGCGTCACCTCGTGGCCGCACTACCACTCCTGTTTCTCTCTCCTTGCCTTTCGCCTCCGTTGGACAGGCTAAGCCGTTGCAAGACGTCGCTTTGAGCACCGACCATGTGGCGAAAAGCCTCGTCGGCACCTCCGTTTTTACAGTTAGCAATACGAACAATGAATTTGTGTTGATTTCCGACCCTAATAATGGCGCTAAGTCTATTGGTTTGCTTTGCTTTCGCAAAGAGGATGCCGAGGCTTTTCTTGCTCAGGTTCAGTTGAGGAGGAGGGAGCTGCGGAGTCAGGCTAAGATTGTTCCAATTAGCCTAGACCAGGTGTACATGTTAAAGGTTGAAGGAATTGCATTCCGATTCTTGCCTGATCCGGTCCAAATAAAGAACGCACTAGATTTGAAAGCATCGGAGACTAAAAGTGGGTTTGACGGTGTTCCTGTGTTTCAGTCAGATCTTCTGGTTGTGAAGAAGAAAAATAAGCGGTACTGCCCTATTTATTTTCGAAAGGAAGATATAGAGAAAGAACTGTCTCAGAGGGCATCGCGAGGGCGGGGACCTTCTCAGAACATAGTGGTTGGGAGTTTGGAAGACGTTTTGAAGAAAATGGAGATAAACGAGAAGAATTCTGGCTGGGGCGATTTTATTTTTATTCCACCTGGTAAAAGCCATCTACAACATATTCAAGAGAAGCAGAGAACGTACTGTGCAGCATTGAAGAATGAAGACTCGAGGTCTCTTCTTCATCTCTTTAAAGTTTATCAAATGGCAGAAAATGGTGTCTGCATTTATCGCGGAGGATTTACACTTTATCTGCAATAG

Protein sequence

MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPSQNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQEKQRTYCAALKNEDSRSLLHLFKVYQMAENGVCIYRGGFTLYLQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo04683	Spo04683	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo04683.1	Spo04683.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04683.1.exon.1	Spo04683.1.exon.1	exon
Spo04683.1.exon.2	Spo04683.1.exon.2	exon
Spo04683.1.exon.3	Spo04683.1.exon.3	exon
Spo04683.1.exon.4	Spo04683.1.exon.4	exon
Spo04683.1.exon.5	Spo04683.1.exon.5	exon
Spo04683.1.exon.6	Spo04683.1.exon.6	exon
Spo04683.1.exon.7	Spo04683.1.exon.7	exon
Spo04683.1.exon.8	Spo04683.1.exon.8	exon
Spo04683.1.exon.9	Spo04683.1.exon.9	exon
Spo04683.1.exon.10	Spo04683.1.exon.10	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04683.1.utr5p.1	Spo04683.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04683.1.CDS.1	Spo04683.1.CDS.1	CDS
Spo04683.1.CDS.2	Spo04683.1.CDS.2	CDS
Spo04683.1.CDS.3	Spo04683.1.CDS.3	CDS
Spo04683.1.CDS.4	Spo04683.1.CDS.4	CDS
Spo04683.1.CDS.5	Spo04683.1.CDS.5	CDS
Spo04683.1.CDS.6	Spo04683.1.CDS.6	CDS
Spo04683.1.CDS.7	Spo04683.1.CDS.7	CDS
Spo04683.1.CDS.8	Spo04683.1.CDS.8	CDS
Spo04683.1.CDS.9	Spo04683.1.CDS.9	CDS
Spo04683.1.CDS.10	Spo04683.1.CDS.10	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo04683.1.utr3p.1	Spo04683.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|902140000|gb|KNA04609.1| (hypothetical protein SOVF_198130 [Spinacia oleracea])

HSP 1 Score: 552.0 bits (1421), Expect = 7.100e-154
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1


		  
Query: 1   MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG 60
           MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG
Sbjct: 1   MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG 60

Query: 61  RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA 120
           RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA
Sbjct: 61  RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA 120

Query: 121 KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI 180
           KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI
Sbjct: 121 KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI 180

Query: 181 KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS 240
           KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS
Sbjct: 181 KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS 240

Query: 241 QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE
Sbjct: 241 QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 282

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|731346045|ref|XP_010684246.1| (PREDICTED: protein TIC 22, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 442.6 bits (1137), Expect = 6.000e-121
Identity = 228/276 (82.61%), Postives = 248/276 (89.86%), Query Frame = 1


		  
Query: 7   MDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPV 66
           MD    A   R NPLLS+STF++RLG +LTTRLD+ RRLAG  ISTL+P+ PR RTT P+
Sbjct: 1   MDPPQSAPLVRTNPLLSLSTFINRLGTDLTTRLDDGRRLAGALISTLAPSPPRARTTAPL 60

Query: 67  SLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLL 126
           SLS  FAS+GQAK   +VA S++HVA +L GTSV+TVSNTNNEFVLISDPN+GAKSIGLL
Sbjct: 61  SLSSSFASIGQAKQSLNVASSSNHVANTLAGTSVYTVSNTNNEFVLISDPNDGAKSIGLL 120

Query: 127 CFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL 186
           CFRKEDAEAFLAQVQLRR+ELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL
Sbjct: 121 CFRKEDAEAFLAQVQLRRKELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL 180

Query: 187 KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPSQNIVVG 246
           KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQR+SRGRG SQ IVVG
Sbjct: 181 KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRSSRGRGLSQPIVVG 240

Query: 247 SLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           SLE+VLKKME++EKNSGW D IFIPPGKSH QHIQE
Sbjct: 241 SLENVLKKMEVSEKNSGWDDLIFIPPGKSHSQHIQE 276

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|747073904|ref|XP_011083929.1| (PREDICTED: protein TIC 22, chloroplastic [Sesamum indicum])

HSP 1 Score: 372.9 bits (956), Expect = 5.900e-100
Identity = 202/281 (71.89%), Postives = 228/281 (81.14%), Query Frame = 1


		  
Query: 9   SSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRR-LAGNFISTLSPASPRGRTTTPVS 68
           S+ P+ G  PNPLLS+STF+HRLG++L TRLD+++R  A  F + L PA P         
Sbjct: 5   SAKPSVGPPPNPLLSLSTFIHRLGSQLATRLDDTKRPAAAAFPAFLPPAPPH-------- 64

Query: 69  LSLPFASVGQAKPLQDVA----LSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSI 128
            SLPFASV Q +  Q  A    L+++HVA+ LVGTSV+TVSNTNNEFVL+SDP  G KSI
Sbjct: 65  -SLPFASVSQRQGKQTAASETSLNSEHVARRLVGTSVYTVSNTNNEFVLVSDPE-GVKSI 124

Query: 129 GLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNA 188
           GLLCFRKEDAEAFLAQV+ RR ELR  AK+VPI+LDQVYMLKVEGIAFRFLPDPVQIKNA
Sbjct: 125 GLLCFRKEDAEAFLAQVKSRRGELRGGAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNA 184

Query: 189 LDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELS--QRASRGRGPSQ 248
           L+LKAS+ KSGFDGVPVFQSDLLVVKKKNKRYCPIYF+KEDIEK LS   R SRG G SQ
Sbjct: 185 LELKASDIKSGFDGVPVFQSDLLVVKKKNKRYCPIYFQKEDIEKALSTVSRVSRGAGFSQ 244

Query: 249 NIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           +I+VGSLEDVLKKMEIN KNSGW D IFIPPGKSH QHIQ+
Sbjct: 245 HIMVGSLEDVLKKMEINGKNSGWEDLIFIPPGKSHSQHIQD 275

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|225458599|ref|XP_002284687.1| (PREDICTED: protein TIC 22, chloroplastic [Vitis vinifera])

HSP 1 Score: 372.1 bits (954), Expect = 1.000e-99
Identity = 204/274 (74.45%), Postives = 231/274 (84.31%), Query Frame = 1


		  
Query: 19  NPLLSVSTFMH----RLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPFAS 78
           NPLLS STF+H    RLGAEL +RLD++RRLAGN+        P  R + P+S SLPFAS
Sbjct: 8   NPLLSFSTFIHQHCLRLGAELASRLDDTRRLAGNW------PPPALRRSLPLS-SLPFAS 67

Query: 79  VGQ----AKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRK 138
           + Q    AK    VALS+DHVAKSL GT+V+TVSN+NNEFVLISDPN G KSIGLLCFR+
Sbjct: 68  MSQEARGAKRDLGVALSSDHVAKSLAGTAVYTVSNSNNEFVLISDPN-GIKSIGLLCFRQ 127

Query: 139 EDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASE 198
           EDAEAFLAQVQ R RELRSQA++VPISLDQVYMLKVEGIAFRFLPDPVQIKNAL+LKA++
Sbjct: 128 EDAEAFLAQVQSRTRELRSQARVVPISLDQVYMLKVEGIAFRFLPDPVQIKNALELKAAD 187

Query: 199 TKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSL 258
            KSGFDGVPVFQSDLLVVKKKN+RYCPIYF+KEDI KELS+  R+SRG G +Q+I+VGSL
Sbjct: 188 IKSGFDGVPVFQSDLLVVKKKNRRYCPIYFQKEDIVKELSKVSRSSRGPGVTQHIMVGSL 247

Query: 259 EDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           EDVL+KME +EKNSGW D IFIPPGKSH QHIQE
Sbjct: 248 EDVLRKMETSEKNSGWEDLIFIPPGKSHSQHIQE 273

[Close]

BLAST of Spo04683.1 vs. NCBI nr
Match: gi|565376814|ref|XP_006354891.1| (PREDICTED: protein TIC 22, chloroplastic isoform X1 [Solanum tuberosum])

HSP 1 Score: 367.9 bits (943), Expect = 1.900e-98
Identity = 199/288 (69.10%), Postives = 238/288 (82.64%), Query Frame = 1


		  
Query: 10  STPATGGRPN--PLLSVSTFMH----RLGAELTTRLDESRRL----AGNFISTLSPASPR 69
           S P+TG  P+  PLLS+STF+H    RLGAELT R+DE++RL    A +FI    PA+  
Sbjct: 3   SKPSTGFGPSSSPLLSLSTFVHQHCSRLGAELTNRIDEAKRLSSKIAADFIQQPLPAAIG 62

Query: 70  GRTTTPVS---LSLPFASVGQA--KPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLIS 129
              + P+    LSLPFASV Q   K  ++  LS+D+VAK+L GTSV+TVSN+NNEFVLIS
Sbjct: 63  RSCSLPLHSYHLSLPFASVSQRQEKVAKNTGLSSDYVAKTLTGTSVYTVSNSNNEFVLIS 122

Query: 130 DPNNGAKSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFL 189
           DPN+ AKSIGLLCFR+EDAEAFLAQV+LR+ E+R  AK+VP++LDQVYMLKVEGIAFRFL
Sbjct: 123 DPNS-AKSIGLLCFRQEDAEAFLAQVRLRKGEVRGGAKVVPLTLDQVYMLKVEGIAFRFL 182

Query: 190 PDPVQIKNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRAS 249
           PDPVQIKNA++LKAS+ K+GFDGVPVFQSDLLVVKK+N+RYCPIYFRKEDIEKELS RAS
Sbjct: 183 PDPVQIKNAMELKASDVKTGFDGVPVFQSDLLVVKKRNRRYCPIYFRKEDIEKELSSRAS 242

Query: 250 RGRGPSQNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           RG   SQ+I+VG+LEDVLKKMEI+++NSGW D IFIPPGKSH QHIQ+
Sbjct: 243 RGSSVSQHIMVGTLEDVLKKMEISQRNSGWEDLIFIPPGKSHSQHIQD 289

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QBH7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_198130 PE=4 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 4.900e-154
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1


		  
Query: 1   MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG 60
           MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG
Sbjct: 1   MVEGSGMDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRG 60

Query: 61  RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA 120
           RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA
Sbjct: 61  RTTTPVSLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGA 120

Query: 121 KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI 180
           KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI
Sbjct: 121 KSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQI 180

Query: 181 KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS 240
           KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS
Sbjct: 181 KNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPS 240

Query: 241 QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE
Sbjct: 241 QNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 282

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BY32_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g162930 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 4.200e-121
Identity = 228/276 (82.61%), Postives = 248/276 (89.86%), Query Frame = 1


		  
Query: 7   MDSSTPATGGRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPV 66
           MD    A   R NPLLS+STF++RLG +LTTRLD+ RRLAG  ISTL+P+ PR RTT P+
Sbjct: 1   MDPPQSAPLVRTNPLLSLSTFINRLGTDLTTRLDDGRRLAGALISTLAPSPPRARTTAPL 60

Query: 67  SLSLPFASVGQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLL 126
           SLS  FAS+GQAK   +VA S++HVA +L GTSV+TVSNTNNEFVLISDPN+GAKSIGLL
Sbjct: 61  SLSSSFASIGQAKQSLNVASSSNHVANTLAGTSVYTVSNTNNEFVLISDPNDGAKSIGLL 120

Query: 127 CFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL 186
           CFRKEDAEAFLAQVQLRR+ELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL
Sbjct: 121 CFRKEDAEAFLAQVQLRRKELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDL 180

Query: 187 KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGRGPSQNIVVG 246
           KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQR+SRGRG SQ IVVG
Sbjct: 181 KASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRSSRGRGLSQPIVVG 240

Query: 247 SLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           SLE+VLKKME++EKNSGW D IFIPPGKSH QHIQE
Sbjct: 241 SLENVLKKMEVSEKNSGWDDLIFIPPGKSHSQHIQE 276

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: F6GZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g10590 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 7.000e-100
Identity = 204/274 (74.45%), Postives = 231/274 (84.31%), Query Frame = 1


		  
Query: 19  NPLLSVSTFMH----RLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPFAS 78
           NPLLS STF+H    RLGAEL +RLD++RRLAGN+        P  R + P+S SLPFAS
Sbjct: 8   NPLLSFSTFIHQHCLRLGAELASRLDDTRRLAGNW------PPPALRRSLPLS-SLPFAS 67

Query: 79  VGQ----AKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRK 138
           + Q    AK    VALS+DHVAKSL GT+V+TVSN+NNEFVLISDPN G KSIGLLCFR+
Sbjct: 68  MSQEARGAKRDLGVALSSDHVAKSLAGTAVYTVSNSNNEFVLISDPN-GIKSIGLLCFRQ 127

Query: 139 EDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASE 198
           EDAEAFLAQVQ R RELRSQA++VPISLDQVYMLKVEGIAFRFLPDPVQIKNAL+LKA++
Sbjct: 128 EDAEAFLAQVQSRTRELRSQARVVPISLDQVYMLKVEGIAFRFLPDPVQIKNALELKAAD 187

Query: 199 TKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSL 258
            KSGFDGVPVFQSDLLVVKKKN+RYCPIYF+KEDI KELS+  R+SRG G +Q+I+VGSL
Sbjct: 188 IKSGFDGVPVFQSDLLVVKKKNRRYCPIYFQKEDIVKELSKVSRSSRGPGVTQHIMVGSL 247

Query: 259 EDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           EDVL+KME +EKNSGW D IFIPPGKSH QHIQE
Sbjct: 248 EDVLRKMETSEKNSGWEDLIFIPPGKSHSQHIQE 273

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: M1ADY4_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008017 PE=4 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 1.300e-98
Identity = 199/288 (69.10%), Postives = 238/288 (82.64%), Query Frame = 1


		  
Query: 10  STPATGGRPN--PLLSVSTFMH----RLGAELTTRLDESRRL----AGNFISTLSPASPR 69
           S P+TG  P+  PLLS+STF+H    RLGAELT R+DE++RL    A +FI    PA+  
Sbjct: 3   SKPSTGFGPSSSPLLSLSTFVHQHCSRLGAELTNRIDEAKRLSSKIAADFIQQPLPAAIG 62

Query: 70  GRTTTPVS---LSLPFASVGQA--KPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLIS 129
              + P+    LSLPFASV Q   K  ++  LS+D+VAK+L GTSV+TVSN+NNEFVLIS
Sbjct: 63  RSCSLPLHSYHLSLPFASVSQRQEKVAKNTGLSSDYVAKTLTGTSVYTVSNSNNEFVLIS 122

Query: 130 DPNNGAKSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFL 189
           DPN+ AKSIGLLCFR+EDAEAFLAQV+LR+ E+R  AK+VP++LDQVYMLKVEGIAFRFL
Sbjct: 123 DPNS-AKSIGLLCFRQEDAEAFLAQVRLRKGEVRGGAKVVPLTLDQVYMLKVEGIAFRFL 182

Query: 190 PDPVQIKNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRAS 249
           PDPVQIKNA++LKAS+ K+GFDGVPVFQSDLLVVKK+N+RYCPIYFRKEDIEKELS RAS
Sbjct: 183 PDPVQIKNAMELKASDVKTGFDGVPVFQSDLLVVKKRNRRYCPIYFRKEDIEKELSSRAS 242

Query: 250 RGRGPSQNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           RG   SQ+I+VG+LEDVLKKMEI+++NSGW D IFIPPGKSH QHIQ+
Sbjct: 243 RGSSVSQHIMVGTLEDVLKKMEISQRNSGWEDLIFIPPGKSHSQHIQD 289

[Close]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HS19_SOLCH (Uncharacterized protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.900e-98
Identity = 199/288 (69.10%), Postives = 237/288 (82.29%), Query Frame = 1


		  
Query: 10  STPATGGRPN--PLLSVSTFMH----RLGAELTTRLDESRRL----AGNFISTLSPASPR 69
           S P+TG  P+  PLLS+STF+H    RLGAELT R DE++RL    A +FI    PA+  
Sbjct: 3   SKPSTGFGPSSSPLLSLSTFVHQHCSRLGAELTNRFDEAKRLSSKIAADFIQQPLPAAIG 62

Query: 70  GRTTTPVS---LSLPFASVGQA--KPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLIS 129
              + P+    LSLPFASV Q   K  ++  LS+D+VAK+L GTSV+TVSN+NNEFVLIS
Sbjct: 63  RSCSLPLHSYHLSLPFASVSQRQEKVAKNTGLSSDYVAKTLTGTSVYTVSNSNNEFVLIS 122

Query: 130 DPNNGAKSIGLLCFRKEDAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFL 189
           DPN+ AKSIGLLCFR+EDAEAFLAQV+LR+ E+R  AK+VP++LDQVYMLKVEGIAFRFL
Sbjct: 123 DPNS-AKSIGLLCFRQEDAEAFLAQVRLRKGEVRGGAKVVPLTLDQVYMLKVEGIAFRFL 182

Query: 190 PDPVQIKNALDLKASETKSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQRAS 249
           PDPVQIKNA++LKAS+ K+GFDGVPVFQSDLLVVKK+N+RYCPIYFRKEDIEKELS RAS
Sbjct: 183 PDPVQIKNAMELKASDLKTGFDGVPVFQSDLLVVKKRNRRYCPIYFRKEDIEKELSSRAS 242

Query: 250 RGRGPSQNIVVGSLEDVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           RG   SQ+I+VG+LEDVLKKMEI+++NSGW D IFIPPGKSH QHIQ+
Sbjct: 243 RGSSVSQHIMVGTLEDVLKKMEISQRNSGWEDLIFIPPGKSHSQHIQD 289

[Close]

BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
Match: TIC22_ARATH (Protein TIC 22, chloroplastic OS=Arabidopsis thaliana GN=TIC22 PE=1 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.400e-87
Identity = 176/273 (64.47%), Postives = 216/273 (79.12%), Query Frame = 1


		  
Query: 17  RPNPLLSVSTFMH----RLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPF 76
           +PNP LS S+F+H    R  ++L+ R+++++R    F  TL  A+ R    TP     PF
Sbjct: 6   KPNPFLSFSSFIHHQCTRFSSDLSARIEDTKR----FAETL--ATRRFSLPTPP----PF 65

Query: 77  ASVGQAKP-LQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKE 136
           ASV Q+K       LS   VAK+L GTSVFTVSNTNNEFVLISDP  G KSIGLLCFR+E
Sbjct: 66  ASVSQSKSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGG-KSIGLLCFRQE 125

Query: 137 DAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASET 196
           DAEAFLAQ +LRRREL++ AK+VPI+LDQVY+LKVEGI+FRFLPDP+QIKNAL+LK+S  
Sbjct: 126 DAEAFLAQARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGN 185

Query: 197 KSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSLE 256
           K+GFDGVPVFQS+LLVV+KKN+RYCP+YF KEDIE+ELS+  RASRG    Q I+VGSLE
Sbjct: 186 KNGFDGVPVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRG---DQQIMVGSLE 245

Query: 257 DVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           DVL+KME++EKNSGW D IFIPPG+S+ QH+Q+
Sbjct: 246 DVLRKMEMSEKNSGWEDVIFIPPGRSYAQHMQD 264

[Close]

BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
Match: TIC22_PEA (Protein TIC 22, chloroplastic OS=Pisum sativum GN=TIC22 PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.600e-84
Identity = 168/269 (62.45%), Postives = 203/269 (75.46%), Query Frame = 1


		  
Query: 16  GRPNPLLSVSTFMHRLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPFASV 75
           G+ NPLLS S F++     L TRL+E++RLAG  I                       S 
Sbjct: 5   GQWNPLLSFSRFINHHSNHLATRLEETKRLAGTLIQ----------------------SH 64

Query: 76  GQAKPLQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKEDAEA 135
            + KP     L+ +HVAKSL GTSV+TVSN++NEFVL+SD   GAKSIGLLCFR+EDAEA
Sbjct: 65  TRTKPAFAATLTPNHVAKSLAGTSVYTVSNSDNEFVLMSDA-EGAKSIGLLCFRQEDAEA 124

Query: 136 FLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASETKSGF 195
           FLAQV+ R++E R  AK+VPI+LDQVYMLKVEGIAFRFLPDPVQIKNAL+L+A+  +  F
Sbjct: 125 FLAQVRSRKKEFRGGAKVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELRAA-NRGSF 184

Query: 196 DGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSLEDVLK 255
           DGVPVFQSDLLVVKKKNKRYCP+YF KED+E ELS+  R+S+G G SQ+I+VGS EDVLK
Sbjct: 185 DGVPVFQSDLLVVKKKNKRYCPVYFSKEDLEYELSKVSRSSKGVGVSQHIMVGSFEDVLK 244

Query: 256 KMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           KME++EK+SGW D +FIPPGK H QH+QE
Sbjct: 245 KMELSEKSSGWEDLVFIPPGKKHSQHMQE 249

[Close]

BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
Match: TI22L_ARATH (Protein TIC 22-like, chloroplastic OS=Arabidopsis thaliana GN=TIC22L PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.800e-32
Identity = 80/196 (40.82%), Postives = 122/196 (62.24%), Query Frame = 1


		  
Query: 86  LSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKEDAEAFLAQVQLRRR 145
           LS D + + L G  V+ +SN+N EFVL+S  ++G KS+GLL  ++EDAE  L +++    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSG-KSLGLLFCKEEDAETLLKEMKSMDP 169

Query: 146 ELRSQ-AKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLK--ASETKSGFDGVPVFQ 205
            +R + +K+V ++L +V+ LKV G+AFR +P+  Q+KNAL  +  A      F GVPVFQ
Sbjct: 170 RMRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQ 229

Query: 206 SDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGR--GPS---QNIVVGSLEDVLKKMEI 265
           S  L+++ +N  Y P++FRKED+EK L + +S+     P+    +I V   ED++K M  
Sbjct: 230 SKSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR- 289

Query: 266 NEKNSGWGDFIFIPPG 274
               S W D +FIPPG
Sbjct: 290 ESTTSNWDDIVFIPPG 303

[Close]

BLAST of Spo04683.1 vs. TAIR (Arabidopsis)
Match: AT4G33350.1 (Tic22-like family protein)

HSP 1 Score: 322.8 bits (826), Expect = 2.500e-88
Identity = 176/273 (64.47%), Postives = 216/273 (79.12%), Query Frame = 1


		  
Query: 17  RPNPLLSVSTFMH----RLGAELTTRLDESRRLAGNFISTLSPASPRGRTTTPVSLSLPF 76
           +PNP LS S+F+H    R  ++L+ R+++++R    F  TL  A+ R    TP     PF
Sbjct: 6   KPNPFLSFSSFIHHQCTRFSSDLSARIEDTKR----FAETL--ATRRFSLPTPP----PF 65

Query: 77  ASVGQAKP-LQDVALSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKE 136
           ASV Q+K       LS   VAK+L GTSVFTVSNTNNEFVLISDP  G KSIGLLCFR+E
Sbjct: 66  ASVSQSKSGTPTTTLSPSLVAKALAGTSVFTVSNTNNEFVLISDPTGG-KSIGLLCFRQE 125

Query: 137 DAEAFLAQVQLRRRELRSQAKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLKASET 196
           DAEAFLAQ +LRRREL++ AK+VPI+LDQVY+LKVEGI+FRFLPDP+QIKNAL+LK+S  
Sbjct: 126 DAEAFLAQARLRRRELKTNAKVVPITLDQVYLLKVEGISFRFLPDPIQIKNALELKSSGN 185

Query: 197 KSGFDGVPVFQSDLLVVKKKNKRYCPIYFRKEDIEKELSQ--RASRGRGPSQNIVVGSLE 256
           K+GFDGVPVFQS+LLVV+KKN+RYCP+YF KEDIE+ELS+  RASRG    Q I+VGSLE
Sbjct: 186 KNGFDGVPVFQSELLVVRKKNRRYCPVYFSKEDIERELSKYTRASRG---DQQIMVGSLE 245

Query: 257 DVLKKMEINEKNSGWGDFIFIPPGKSHLQHIQE 283
           DVL+KME++EKNSGW D IFIPPG+S+ QH+Q+
Sbjct: 246 DVLRKMEMSEKNSGWEDVIFIPPGRSYAQHMQD 264

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BLAST of Spo04683.1 vs. TAIR (Arabidopsis)
Match: AT3G23710.1 (Tic22-like family protein)

HSP 1 Score: 141.4 bits (355), Expect = 1.000e-33
Identity = 80/196 (40.82%), Postives = 122/196 (62.24%), Query Frame = 1


		  
Query: 86  LSTDHVAKSLVGTSVFTVSNTNNEFVLISDPNNGAKSIGLLCFRKEDAEAFLAQVQLRRR 145
           LS D + + L G  V+ +SN+N EFVL+S  ++G KS+GLL  ++EDAE  L +++    
Sbjct: 110 LSADAIEERLAGVPVYALSNSNEEFVLVSGTSSG-KSLGLLFCKEEDAETLLKEMKSMDP 169

Query: 146 ELRSQ-AKIVPISLDQVYMLKVEGIAFRFLPDPVQIKNALDLK--ASETKSGFDGVPVFQ 205
            +R + +K+V ++L +V+ LKV G+AFR +P+  Q+KNAL  +  A      F GVPVFQ
Sbjct: 170 RMRKEGSKVVALALSKVFQLKVNGVAFRLIPESTQVKNALKERKTAGIDDDDFHGVPVFQ 229

Query: 206 SDLLVVKKKNKRYCPIYFRKEDIEKELSQRASRGR--GPS---QNIVVGSLEDVLKKMEI 265
           S  L+++ +N  Y P++FRKED+EK L + +S+     P+    +I V   ED++K M  
Sbjct: 230 SKSLILRSENMSYRPVFFRKEDLEKSLIRASSQQNRLNPALKPGDIQVAVFEDIVKGMR- 289

Query: 266 NEKNSGWGDFIFIPPG 274
               S W D +FIPPG
Sbjct: 290 ESTTSNWDDIVFIPPG 303

The following BLAST results are available for this feature:

BLAST of Spo04683.1 vs. NCBI nr
BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
BLAST of Spo04683.1 vs. TAIR (Arabidopsis)

BLAST of Spo04683.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902140000\|gb\|KNA04609.1\|	7.1e-154	100.	hypothetical protein SOVF_1981...	[more]
gi\|731346045\|ref\|XP_010684246.1\|	6.0e-121	82.6	PREDICTED: protein TIC 22, chl...	[more]
gi\|747073904\|ref\|XP_011083929.1\|	5.9e-100	71.8	PREDICTED: protein TIC 22, chl...	[more]
gi\|225458599\|ref\|XP_002284687.1\|	1.0e-99	74.4	PREDICTED: protein TIC 22, chl...	[more]
gi\|565376814\|ref\|XP_006354891.1\|	1.9e-98	69.1	PREDICTED: protein TIC 22, chl...	[more]

BLAST of Spo04683.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QBH7_SPIOL	4.9e-154	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BY32_BETVU	4.2e-121	82.6	Uncharacterized protein OS=Bet...	[more]
F6GZZ6_VITVI	7.0e-100	74.4	Putative uncharacterized prote...	[more]
M1ADY4_SOLTU	1.3e-98	69.1	Uncharacterized protein OS=Sol...	[more]
A0A0V0HS19_SOLCH	2.9e-98	69.1	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo04683.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
TIC22_ARATH	4.4e-87	64.4	Protein TIC 22, chloroplastic ...	[more]
TIC22_PEA	2.6e-84	62.4	Protein TIC 22, chloroplastic ...	[more]
TI22L_ARATH	1.8e-32	40.8	Protein TIC 22-like, chloropla...	[more]

BLAST of Spo04683.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G33350.1	2.5e-88	64.4	Tic22-like family protein	[more]
AT3G23710.1	1.0e-33	40.8	Tic22-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007378	Tic22-like	PFAM	PF04278	Tic22	coord: 21..282 score: 5.6E
None	No IPR available	unknown	Coil	Coil	coord: 130..150 scor
None	No IPR available	PANTHER	PTHR33926	FAMILY NOT NAMED	coord: 17..287 score: 2.3E
None	No IPR available	PANTHER	PTHR33926:SF2	PROTEIN TIC 22, CHLOROPLASTIC	coord: 17..287 score: 2.3E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0031972	chloroplast intermembrane space
cellular_component	GO:0016020	membrane