Spo04987.1 (mRNA)

Overview
NameSpo04987.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionHydroxyproline-rich glycoprotein family protein
Locationchr6 : 12356349 .. 12359174 (-)
Sequence length945
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACACGATTCATATTCATTTATCTGCATTTCTCTTTTTCTCTCTCTCAGTCCTCCATTTTCATTCATTATCCGAGTTTTGAGTTATAAATATAATAATAAAGGCTCTGGTTTGGCCTATGAGAGAAAGAATAGCCGTAAATAGGAAATTATACGATGGAGCACAGTCCAGTTTACAACCCTGTAGTACATCACCATTCCGATGCATCACGACCGTCCCTTGGTTTTCCACTTGGAACAGCTCTTCTTTTATTGGTGATCTTCAGTTTAAGTGGGATTTTCTCATGTTGTTATCATTGGGACAAGTTTCGATCACTCCGTCAATCTTATTCCGATGATCTTGACCTTGAAGCTGCTAATCACCCTGCTAAACCCAATTACCCTAATTACTTATTGGTAAGTTGTTTCTTTCTTTGTTATTCATACTAATACTTACGCCAAACTCTTCCTTTTATTCCTAAATAAATCACTTATTCTTAGATCGAGAATTCTTTTTTAATGTCTTATAATAACTTCAATTATAAATTTTTGAATTACTCCGTACATAACAAACGTTAAAAATTAAAAACATTGACGAGATAGCTAAATACATACAACAAGGGCATAAGGCTAATCCGCTAATCTAATCATAATTAGGTTTGATTTACGCTTTACATTCTTCTAGATTTTTGAGTACTCCATTCCCTCTATGAGTCGGACTGTGGATCCCATTTTTTAAATTACAAATTTAATTATTAGATGGAGAATATTAAATATTTTCCGTACTAATTTAACTGGATTTTGATTTTGAGCCCTGTGCGATACCATTTTTTACAGGTACGTTTAGAATAAGTGTTTTTTTTTAAAAGCCTTTTCCATAAAATGGGGTGAGTGTTTTTCTTTTCCATGTAAAACAATACGGAGTACAGTATATCGTAGTCTTATACGGAGTACGATCTTAGTTTTTTTTTAAAATATATTATTACATGAACTCCAATACAATATTTAATTATTAATATTTTTAATTTAATGCGAATTATAAATCATCAATTTGGAATATAAATCGACAAGAATCTCACGTAATTAATATTAATGATTTGATGAACATAGTCAAAATTGACGGAATTAAAGTCAAAGTTTAAAAACTTTGAACAAAATGTTATTGTTGAAGTTTTTTTTTTTTTTTTTCAAGCAGATGTAGCCAAAAAATCTTAAAGTAAGTCTATGCTTAAGTTATCTTACATTATAAAGTTCAAATTCAAATTTGCAAAAAACAACTTTAAATTTGGATATTGGCTATTTTTGGCTATAGAAATAAATTTATTAATTTATTTTAGGTGGTCATATAAATTAGGTGTTGGATATGAATGGCACCGAATATTAAAAAGTAACACCAAAGGCCCACAAGAGTTACACACTCATTCTTTTTTTTGTTTTTGTTTTTGTTGAGGGGAATACATACTCACTAATAGCTGGCTTTATTAATGCTTTTTAATTCCTTAATTACGTTTTCAAAAATATATTGCTGTTAATTTAAATGAAAAGATACTGACGTTACTTTCTTAGGCTTCCTTTTCAATCCTATATAATGCCTTATTTGTAGTTGAGTGAAAGGGAAGATCTCATATGCCATAGGGGCGTAGGCTAGTTATTGGAGGAAGATATTGTACTAATCTATTTATTCCGGTTTCGGAAATATAGTCTTGTTTTCAGACACCAACTCTTACAAAAAAAAAAAAAACACACGATCATTCTTCCAAGGCAATATTCACCCTCGCCATTTTTATTAGAATGTCGTTCTTTTCTACTCCCTCCATATTTAGTTACCTTTATTTTTCTTATTTAACTATCATGGTCTCCACTTTTAATATATTAATTAATATATCTCTCTTTCTTTGTAGTCCTTAAATTTACTCACATCATTTTTACTACAATAAATAATTCACTCACTACCCTCACTCTCCATCTTATTTTAATAAATTGGACTCACTATACTAAAACTACGTGTCGGTTAAACTATATTCTTTAATTAAATATGGAGGAAGTATGGAATACCAAACTATTTTTCCAATTGTAATGTGAATACTTAGTTTATTTTTTTTAAAGTAAAATTAATTCATCGATAAAAAGTAATATAATTAAAATTATTAACTAGCTGATTAGTATGTTTACAACTAAGATTTAGTTTTAGCTTATTATAATTGATTTATTTGTAATTTTGTATCTACGTGTGGTGTTTTGGATCGATAACAAAATAGCATACAGTATACTGATAAATTATGTTGGTTGAAAATGCAGAAACAACAACAAATGGAAAGCCTACCAGTGATAATGCCAGGAGACAATATAGCGAAGTTTATAGCTCTACCATGCCCATGTGAACCACATCGCCCAGAAATGCAAGCCCCAATTCCAACTCCTAATAAACCTGCTAAGCCGCCACGTTTCCCAGTCCCTTTGTATTGATCCATTATTATTATTATTATTATTATCTAATTAATTAATTTATGATTAGATTATTTTTTTTTATCACATTTTTCTACACAAAAAAGTTGACAAATTTGGTTTATAATCTTGTAGTACTCGTAGTTAATACTTTGTAGTTTGTAAATACATAATATTATTACGTGAATTTTCTTCTCCCTGAGTCATACTGTTTGTGTATTAGTTAGTTTTATTGGTTGATGTTGGTATTAGTATTTTACATGGCATACCAGTTTCACAAATTGCGAAGAAGATGGTTAATTTGGGTTCTATGAGAATCTGATGTGTTGCCTGCTGCATATGTTGTTTATTACTCCCTGATGAGTGATGAGTGATGAGTGATGACCAAATCAGGGGATTCTCTG

mRNA sequence

CACACGATTCATATTCATTTATCTGCATTTCTCTTTTTCTCTCTCTCAGTCCTCCATTTTCATTCATTATCCGAGTTTTGAGTTATAAATATAATAATAAAGGCTCTGGTTTGGCCTATGAGAGAAAGAATAGCCGTAAATAGGAAATTATACGATGGAGCACAGTCCAGTTTACAACCCTGTAGTACATCACCATTCCGATGCATCACGACCGTCCCTTGGTTTTCCACTTGGAACAGCTCTTCTTTTATTGGTGATCTTCAGTTTAAGTGGGATTTTCTCATGTTGTTATCATTGGGACAAGTTTCGATCACTCCGTCAATCTTATTCCGATGATCTTGACCTTGAAGCTGCTAATCACCCTGCTAAACCCAATTACCCTAATTACTTATTGAAACAACAACAAATGGAAAGCCTACCAGTGATAATGCCAGGAGACAATATAGCGAAGTTTATAGCTCTACCATGCCCATGTGAACCACATCGCCCAGAAATGCAAGCCCCAATTCCAACTCCTAATAAACCTGCTAAGCCGCCACGTTTCCCAGTCCCTTTGTATTGATCCATTATTATTATTATTATTATTATCTAATTAATTAATTTATGATTAGATTATTTTTTTTTATCACATTTTTCTACACAAAAAAGTTGACAAATTTGGTTTATAATCTTGTAGTACTCGTAGTTAATACTTTGTAGTTTGTAAATACATAATATTATTACGTGAATTTTCTTCTCCCTGAGTCATACTGTTTGTGTATTAGTTAGTTTTATTGGTTGATGTTGGTATTAGTATTTTACATGGCATACCAGTTTCACAAATTGCGAAGAAGATGGTTAATTTGGGTTCTATGAGAATCTGATGTGTTGCCTGCTGCATATGTTGTTTATTACTCCCTGATGAGTGATGAGTGATGAGTGATGACCAAATCAGGGGATTCTCTG

Coding sequence (CDS)

ATGGAGCACAGTCCAGTTTACAACCCTGTAGTACATCACCATTCCGATGCATCACGACCGTCCCTTGGTTTTCCACTTGGAACAGCTCTTCTTTTATTGGTGATCTTCAGTTTAAGTGGGATTTTCTCATGTTGTTATCATTGGGACAAGTTTCGATCACTCCGTCAATCTTATTCCGATGATCTTGACCTTGAAGCTGCTAATCACCCTGCTAAACCCAATTACCCTAATTACTTATTGAAACAACAACAAATGGAAAGCCTACCAGTGATAATGCCAGGAGACAATATAGCGAAGTTTATAGCTCTACCATGCCCATGTGAACCACATCGCCCAGAAATGCAAGCCCCAATTCCAACTCCTAATAAACCTGCTAAGCCGCCACGTTTCCCAGTCCCTTTGTATTGA

Protein sequence

MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPTPNKPAKPPRFPVPLY
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo04987Spo04987gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo04987.1Spo04987.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo04987.1.utr5p.1Spo04987.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo04987.1.CDS.2Spo04987.1.CDS.2CDS
Spo04987.1.CDS.1Spo04987.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo04987.1.utr3p.1Spo04987.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo04987.1.exon.2Spo04987.1.exon.2exon
Spo04987.1.exon.1Spo04987.1.exon.1exon


Homology
[Close]
BLAST of Spo04987.1 vs. NCBI nr
Match: gi|902237126|gb|KNA24651.1| (hypothetical protein SOVF_013680 [Spinacia oleracea])

HSP 1 Score: 286.2 bits (731), Expect = 3.000e-74
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

		  

Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD
Sbjct: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60

Query: 61  DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT 120
           DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT
Sbjct: 61  DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT 120

Query: 121 PNKPAKPPRFPVPLY 136
           PNKPAKPPRFPVPLY
Sbjct: 121 PNKPAKPPRFPVPLY 135
[Close]
BLAST of Spo04987.1 vs. NCBI nr
Match: gi|731343773|ref|XP_010683058.1| (PREDICTED: uncharacterized protein At5g65660 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 215.7 bits (548), Expect = 5.000e-53
Identity = 111/138 (80.43%), Postives = 118/138 (85.51%), Query Frame = 1 

		  

Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           M+HSP+Y+PV HH SD SRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLR+SY+ 
Sbjct: 2   MQHSPLYSPVPHH-SDGSRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRRSYNH 61

Query: 61  DLDLEAANH---PAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAP 120
           DLD+EAANH   PAKP   NY  KQ+QM SLPVIMPGD IAKFIALPCPCEP RPE QAP
Sbjct: 62  DLDIEAANHHSDPAKPK-SNY-FKQEQMGSLPVIMPGDKIAKFIALPCPCEPPRPEKQAP 121

Query: 121 IPTPNKPAKPPRFPVPLY 136
           IPT  K  KPPRFPVPLY
Sbjct: 122 IPTTEKTPKPPRFPVPLY 136
[Close]
BLAST of Spo04987.1 vs. NCBI nr
Match: gi|223531648|gb|EEF33474.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 165.2 bits (417), Expect = 7.700e-38
Identity = 89/133 (66.92%), Postives = 100/133 (75.19%), Query Frame = 1 

		  

Query: 5   PVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLDL 64
           P Y+P    H DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLR+S+SDD D 
Sbjct: 18  PHYSPP---HVDASRPSLGFPLGTALLLIIIFTLSGIFSCCYHWDKLRSLRRSFSDDPDP 77

Query: 65  EA--ANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPTPN 124
           EA     P+KP   N  LKQ Q +S PV+MPGD I KFIALPCPCEP R E +  +  P 
Sbjct: 78  EADIEASPSKPKPHNMDLKQNQSQSFPVLMPGDQIPKFIALPCPCEPPRAE-KVVLKVP- 137

Query: 125 KPAKPPRFPVPLY 136
           KP KPPRFPVPLY
Sbjct: 138 KPPKPPRFPVPLY 145
[Close]
BLAST of Spo04987.1 vs. NCBI nr
Match: gi|1000947140|ref|XP_015580681.1| (PREDICTED: uncharacterized protein At5g65660 [Ricinus communis])

HSP 1 Score: 164.1 bits (414), Expect = 1.700e-37
Identity = 86/124 (69.35%), Postives = 96/124 (77.42%), Query Frame = 1 

		  

Query: 14  HSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLDLEA--ANHPA 73
           H DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLR+S+SDD D EA     P+
Sbjct: 12  HVDASRPSLGFPLGTALLLIIIFTLSGIFSCCYHWDKLRSLRRSFSDDPDPEADIEASPS 71

Query: 74  KPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPTPNKPAKPPRFP 133
           KP   N  LKQ Q +S PV+MPGD I KFIALPCPCEP R E +  +  P KP KPPRFP
Sbjct: 72  KPKPHNMDLKQNQSQSFPVLMPGDQIPKFIALPCPCEPPRAE-KVVLKVP-KPPKPPRFP 131

Query: 134 VPLY 136
           VPLY
Sbjct: 132 VPLY 133
[Close]
BLAST of Spo04987.1 vs. NCBI nr
Match: gi|359480520|ref|XP_003632481.1| (PREDICTED: uncharacterized protein At5g65660 [Vitis vinifera])

HSP 1 Score: 161.0 bits (406), Expect = 1.500e-36
Identity = 86/136 (63.24%), Postives = 99/136 (72.79%), Query Frame = 1 

		  

Query: 4   SPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLD 63
           SP ++P    HSD SRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S+SDD D
Sbjct: 3   SPDFSPP---HSDPSRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSFSDDRD 62

Query: 64  LEA----ANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIP 123
            EA    +    KP Y    LKQ   +S+PV+MPGD I KFIALPCPCEP R E +  + 
Sbjct: 63  PEADVRESPSKTKPEYTG--LKQNLSQSMPVLMPGDQIPKFIALPCPCEPPRAE-KIVVQ 122

Query: 124 TPNKPAKPPRFPVPLY 136
               P+KPPRFPVPLY
Sbjct: 123 VQKPPSKPPRFPVPLY 132
[Close]
BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RYS1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_013680 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.100e-74
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

		  

Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD
Sbjct: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60

Query: 61  DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT 120
           DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT
Sbjct: 61  DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPT 120

Query: 121 PNKPAKPPRFPVPLY 136
           PNKPAKPPRFPVPLY
Sbjct: 121 PNKPAKPPRFPVPLY 135
[Close]
BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0F1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g152920 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 3.500e-53
Identity = 111/138 (80.43%), Postives = 118/138 (85.51%), Query Frame = 1 

		  

Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           M+HSP+Y+PV HH SD SRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLR+SY+ 
Sbjct: 2   MQHSPLYSPVPHH-SDGSRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRRSYNH 61

Query: 61  DLDLEAANH---PAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAP 120
           DLD+EAANH   PAKP   NY  KQ+QM SLPVIMPGD IAKFIALPCPCEP RPE QAP
Sbjct: 62  DLDIEAANHHSDPAKPK-SNY-FKQEQMGSLPVIMPGDKIAKFIALPCPCEPPRPEKQAP 121

Query: 121 IPTPNKPAKPPRFPVPLY 136
           IPT  K  KPPRFPVPLY
Sbjct: 122 IPTTEKTPKPPRFPVPLY 136
[Close]
BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: B9SSC5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0187520 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.400e-38
Identity = 89/133 (66.92%), Postives = 100/133 (75.19%), Query Frame = 1 

		  

Query: 5   PVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLDL 64
           P Y+P    H DASRPSLGFPLGTALLL++IF+LSGIFSCCYHWDK RSLR+S+SDD D 
Sbjct: 18  PHYSPP---HVDASRPSLGFPLGTALLLIIIFTLSGIFSCCYHWDKLRSLRRSFSDDPDP 77

Query: 65  EA--ANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIPTPN 124
           EA     P+KP   N  LKQ Q +S PV+MPGD I KFIALPCPCEP R E +  +  P 
Sbjct: 78  EADIEASPSKPKPHNMDLKQNQSQSFPVLMPGDQIPKFIALPCPCEPPRAE-KVVLKVP- 137

Query: 125 KPAKPPRFPVPLY 136
           KP KPPRFPVPLY
Sbjct: 138 KPPKPPRFPVPLY 145
[Close]
BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: D7SSI8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0205g00010 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.000e-36
Identity = 86/136 (63.24%), Postives = 99/136 (72.79%), Query Frame = 1 

		  

Query: 4   SPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSDDLD 63
           SP ++P    HSD SRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S+SDD D
Sbjct: 3   SPDFSPP---HSDPSRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSFSDDRD 62

Query: 64  LEA----ANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPEMQAPIP 123
            EA    +    KP Y    LKQ   +S+PV+MPGD I KFIALPCPCEP R E +  + 
Sbjct: 63  PEADVRESPSKTKPEYTG--LKQNLSQSMPVLMPGDQIPKFIALPCPCEPPRAE-KIVVQ 122

Query: 124 TPNKPAKPPRFPVPLY 136
               P+KPPRFPVPLY
Sbjct: 123 VQKPPSKPPRFPVPLY 132
[Close]
BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Match: A0A061DHB3_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_000913 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.300e-36
Identity = 83/127 (65.35%), Postives = 97/127 (76.38%), Query Frame = 1 

		  

Query: 14  HSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD----DLDLEAANH 73
           H DASRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S SD    D D+EA+  
Sbjct: 10  HVDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKLRSLRRSISDGTGPDADIEASPS 69

Query: 74  PAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPE-MQAPIPTPNKPAKPP 133
            +KP Y +  LK+ Q +SLPV+MPGD I KFIA PCPCEP  P+ ++  +    KP KPP
Sbjct: 70  KSKPEYMD--LKENQSQSLPVLMPGDQIPKFIAFPCPCEPPGPDKVEVKV---QKPPKPP 129

Query: 134 RFPVPLY 136
           RFPVPLY
Sbjct: 130 RFPVPLY 131
[Close]
BLAST of Spo04987.1 vs. ExPASy Swiss-Prot
Match: Y5566_ARATH (Uncharacterized protein At5g65660 OS=Arabidopsis thaliana GN=At5g65660 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 5.500e-36
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = 1 

		  

Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           ME++  ++P    H DASRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S ++
Sbjct: 1   MENTQDFSPP---HMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLAN 60

Query: 61  ---DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPE---M 120
                D+E+  +  KP +P   +K+ Q  S+PV+MPGDN  KFIALPCPC P RPE   +
Sbjct: 61  GRPSADIESNPYKPKPPFPE--MKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTV 120

Query: 121 QAPIPTPNKPAKPPRFPVPLY 136
               P  + P KP RFPVPLY
Sbjct: 121 DVQTPPQSPPVKPARFPVPLY 136
[Close]
BLAST of Spo04987.1 vs. TAIR (Arabidopsis)
Match: AT5G65660.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 151.8 bits (382), Expect = 3.100e-37
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = 1 

		  

Query: 1   MEHSPVYNPVVHHHSDASRPSLGFPLGTALLLLVIFSLSGIFSCCYHWDKFRSLRQSYSD 60
           ME++  ++P    H DASRPSLGFPLGTALLL++IFSLSGIFSCCYHWDK RSLR+S ++
Sbjct: 1   MENTQDFSPP---HMDASRPSLGFPLGTALLLIIIFSLSGIFSCCYHWDKHRSLRRSLAN 60

Query: 61  ---DLDLEAANHPAKPNYPNYLLKQQQMESLPVIMPGDNIAKFIALPCPCEPHRPE---M 120
                D+E+  +  KP +P   +K+ Q  S+PV+MPGDN  KFIALPCPC P RPE   +
Sbjct: 61  GRPSADIESNPYKPKPPFPE--MKKPQNLSVPVLMPGDNTPKFIALPCPCAPPRPEKLTV 120

Query: 121 QAPIPTPNKPAKPPRFPVPLY 136
               P  + P KP RFPVPLY
Sbjct: 121 DVQTPPQSPPVKPARFPVPLY 136
The following BLAST results are available for this feature:
BLAST of Spo04987.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902237126|gb|KNA24651.1|3.0e-74100.hypothetical protein SOVF_0136... [more]
gi|731343773|ref|XP_010683058.1|5.0e-5380.4PREDICTED: uncharacterized pro... [more]
gi|223531648|gb|EEF33474.1|7.7e-3866.9conserved hypothetical protein... [more]
gi|1000947140|ref|XP_015580681.1|1.7e-3769.3PREDICTED: uncharacterized pro... [more]
gi|359480520|ref|XP_003632481.1|1.5e-3663.2PREDICTED: uncharacterized pro... [more]
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BLAST of Spo04987.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RYS1_SPIOL2.1e-74100.Uncharacterized protein OS=Spi... [more]
A0A0J8C0F1_BETVU3.5e-5380.4Uncharacterized protein OS=Bet... [more]
B9SSC5_RICCO5.4e-3866.9Putative uncharacterized prote... [more]
D7SSI8_VITVI1.0e-3663.2Putative uncharacterized prote... [more]
A0A061DHB3_THECC1.3e-3665.3Hydroxyproline-rich glycoprote... [more]
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BLAST of Spo04987.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5566_ARATH5.5e-3657.4Uncharacterized protein At5g65... [more]
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BLAST of Spo04987.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G65660.13.1e-3757.4hydroxyproline-rich glycoprote... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34291FAMILY NOT NAMEDcoord: 4..135
score: 3.2