Spo05265.1 (mRNA)

Overview
NameSpo05265.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 11964658 .. 11965960 (-)
Sequence length334
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTATCCAAATATTTAAACTCAACATGGACCTTAAAATATAAAAATATATATATATAAATTGTCACGCTCCAATTTGACGTCCGCCTAAAAGTAAAGCCCCCATCTTCAAATGTTTGATTTGTTCAACAAAAGCAAAAATCAAACAACCCCCAAATCCCAAATACTACGTTTAAGTTTGGAAGAAATAAGATGCCGTGTTCTTCAATGCGGGCAATTTCTTCTTAACTTCCTTCAACTTTCCTTATTACTTAACCCCGAATCAATTATCCTCCTAATTGCCCATTTAATTTCTTTCAAGTTTTCAGGTACTCATTCTTTCTCATCTTCTTCACCAGTTTATGTTTTTCTTGATTTTGCTTATAAATAGAGTAATTAAGTGTTCTCATTCAGGTTTTCAGTGTTAATTTCTTCTGGGTAATTGCAATTTTCCATCTTTTTTTTCTGGGTTTTGCTGCTGTTATTGATTTCTTCACTTAAAATTTGCGAAGTTACTGAAATCTGAATCTTTGCAGCATATATTATTACGGAGTAGAAGTTATTTTCAGTTTGCTGCTTTGATTTTCTACTGAACTGTTGATTGAAACTATGAATTGAAAATTAATTTTTAAAATTTTCAGTTTTGCTCTAAATCAAAACTTTGATCATATTGTTTAGTGGGTGTTGGTGATTTGATTGAAGTCATTTTAAGTCGAATCTTTTGATTACGTTGGTAATTCAAATTATTTTTTCTACTGTTTGAGTGTGTGTCTGTTTGTTGTTCTGATTCTGCCTTTATTAGGATCCGTATTTGAAGTATGAATTCTGTAACCGTATAGTATTACTATGATGACAGGTTATTGTTATAGCCTTGGATATACGATACACTCGGGTGTATAATGAAAATTGTCGAAATCGTTGATGTTATGAACTGGTGTTTCCCTTTATTGGTTTTTAGTTATATATTTTTTGGTGGCTTGGATCTTTGATGAGTCTATGGAATCTAGAGAAAGTTCAAATTAAAGTTAAAGGAACACTTTTATGTCGACCTTTCTTGATTGTTTAATTTTCTCACTATTGAGATCTTGCCTTGACCAAGTTGAAGGGTTTACTGATTCTTGTTTTTGAAGTTTCAATAGGAATCTGATGTTTTTTTATATATTTACTTGATTCTGTAATTGGATGCTTGTGTTTTGTATTTCGGGTTTAATGATTATTTTGTCATTGATATCCTATGGTTGTTACATCATATGCTGTTTGCTGTTGCTGATTCATTTTGGTATTGGGATAATTTGCAGAAATCTTGTACAGTCGTTTTGCCGTGTAA

mRNA sequence

CTATCCAAATATTTAAACTCAACATGGACCTTAAAATATAAAAATATATATATATAAATTGTCACGCTCCAATTTGACGTCCGCCTAAAAGTAAAGCCCCCATCTTCAAATGTTTGATTTGTTCAACAAAAGCAAAAATCAAACAACCCCCAAATCCCAAATACTACGTTTAAGTTTGGAAGAAATAAGATGCCGTGTTCTTCAATGCGGGCAATTTCTTCTTAACTTCCTTCAACTTTCCTTATTACTTAACCCCGAATCAATTATCCTCCTAATTGCCCATTTAATTTCTTTCAAGTTTTCAGAAATCTTGTACAGTCGTTTTGCCGTGTAA

Coding sequence (CDS)

ATGTTTGATTTGTTCAACAAAAGCAAAAATCAAACAACCCCCAAATCCCAAATACTACGTTTAAGTTTGGAAGAAATAAGATGCCGTGTTCTTCAATGCGGGCAATTTCTTCTTAACTTCCTTCAACTTTCCTTATTACTTAACCCCGAATCAATTATCCTCCTAATTGCCCATTTAATTTCTTTCAAGTTTTCAGAAATCTTGTACAGTCGTTTTGCCGTGTAA

Protein sequence

MFDLFNKSKNQTTPKSQILRLSLEEIRCRVLQCGQFLLNFLQLSLLLNPESIILLIAHLISFKFSEILYSRFAV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo05265Spo05265gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo05265.1Spo05265.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05265.1.utr5p.1Spo05265.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05265.1.CDS.2Spo05265.1.CDS.2CDS
Spo05265.1.CDS.1Spo05265.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05265.1.exon.2Spo05265.1.exon.2exon
Spo05265.1.exon.1Spo05265.1.exon.1exon


Homology
The following BLAST results are available for this feature:
BLAST of Spo05265.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05265.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05265.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05265.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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