Spo05451.1 (mRNA)

Overview
NameSpo05451.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_126 : 1283626 .. 1296175 (-)
Sequence length1071
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGATGCTCTCTATCACTACACTCCTAACAATGGCGAGTGAGCTTTTCTTACTCACTGCACTCCTTCCGAATCTCCTCACTTCACTTCATCTTGTTTCTCCCTGGTATGATTCTCTTTTCTCCGGTTTTGTTAAATTAGGGTTCTTTTTTTTGCTTGTAATTGTTGAATTAGGGTGAATTTTAATTGAATTGGCAAATTGATCGATTTGTCGATTTTGTTGTATGAATTTGTTAATTTATGACTGAATCGGATCATTTTAATTTGAATAGGTTGCGTTAATGGAGAGATTAGTGCAACAAAATTACTTTGCTCATAGGTGGAAAGAGGAGGGTCAAATGAATGAATATTTGGATTCCTTTATGTTTAAAGACTGATCTATGAAATTTTCTTTTTAAAAAATGGAGTCGAATTCTTCAGCAACTCACCAACTACTCCTCGTTGGAAATCAAACACCTGATTTCCCCAGGTTTGCCTAATTTCTCACAATTTTCTTCAATTTTCTTCATCTTTAATTTTCAATTGCCTGTTCTATTTTTCATTTTAGTTGTTAATTTCCGTCGGATGGGTAGGAGATGGATAATCTTGCAATTCTGAAACCAACGGTTTTTCCATGTATTGCTTCGGTTACTACTCTTCATTTTTTTTTCCGAATTTTAAGTTTGTTGTGACATTTCAATTCTAGAATTTGTAACCTGAGAAATTTTATTTGGATTATATCTTTAATTTTGTTTTCATTTTATTTTGTTTCTCTGAATGTATACAGTCCTGAAGTGAAAAGTAATTGGATGTTACCATGCTCATGCTTTTGTTCAGGTTTACGTCGGATTTCTGATATGGGTTTTGTTTTTGAGGTCTAGCTTGAATGTTCGAGTTTTGTTTGACATATCATAGAAAGTTAGAAACCACAAGACATGTCTAGGATTCTAAACTGGATTTTCTATAATGATATGCTATGAAATATTAACCTTTCTATAGTGATATGCTTTGTAATATGGGATCAATAACGGAGGCTAGGTTATTATAGAGGAATTGTAGGTGTGGTATGCAAGATATGCGTGTTTGGCGAGGTTTTATATCATTCCAGTAAGAAGGTAATGCGATTCTTGGTGTTTTGGAAGTTATGTAATGCTTACTACCTTTATTGGTTTGTAAAATTTTGGAAGCTATATAAAGAGTTAAGAAATTCTAATTTTCTTAGATTCTTTGTCATTAATATTGGGTAAAAGCATACGTAAGAAAACACAAAATACGAAAAACAAAGCAACTTCTAAGGTGGCCCTTTTAACGTTTCAATTGTTTTCATTGACGTTATTAATATGGCTTTGAAGAAGTGTTGTTTATTCTAAAATGTAATACGCACAGACCTTTTCACTGCAAACATGAGTTCATCTAATTTGTCCTTAGGATTCTTTAGGCCTTTCAGATGGACTTATTCCTATTTTCACAAGCAGTTGAAGGGTTCGAAAGGAAATTAGTTGCTCTAGGTTTGATAGAAAACGTTTGTGTTAGCAGTACTTGTGTGTGAGTTAGAATGTGATCCAGATTCATAAAGAAGGCTTACTCTGTTTTGTTAATCAGTAAAATCATTGGAATGGACGTGATATGGAATCTAATCGAACCCTGAGCAGTTTGAGTACACGTTAAATTTCCCTTAACCCTTCAAATCTCCCCAATCTCCCTGTTTTGTTTATTGGTTCTCATTCGAATTTCAAGCAATCTTAGTGATCTTATGATTTGTGTTTGATTCCTATATTTTCTCATTCATATGACCGATCAATTCTTGCACTTCAAGAGGGAACACTATAGGGTATCATTAAATGATATGTAGGTTTCTTGGAGCTTGCAAGACAATATAACTACGGAATTATGTTTTAAATCTTATGATAAGTCGTTAGAGAAACAACTACCTATATTCCATGTGGTTAGAGAGAGACAAAGAGGTATGATACAGTTTGAGTTTCTCAAAGAACCCTAGCGACTTGCTACTTTCTCAAATGATACAGTTCATGTGCATTGATTATGGTCAGAAACAGTTGGATGGAAAAACTATGTTTCTCGACCAATAGATCTTATTGCGTTGAACTGAACTATTAACAGTGGGATATGTTTTATATTTTGCAAAAACATTCAAGGTTGCAAATAAGAACTTCATATTTCAATTTGGATTTACTGAATAAATCTGAGAAATAAGATATATTTACAGCAAAAGTTTGCTTCTTTTTTAGTATAGTTTGTTGTTAGTTCAGATTTCTAAATGTGATCAAGTCCTACATTTTTTTTATATATATTTTCTCCTTATTTATTAATTCATTGGTTGCCGATAAAGTAGAACTGATTTTATTGTTGGAGTTTTGTCCAGGGGAAAATATGTCTTTATTAAACTGACATTTAGGGTGTGTTGTTGATCAGTTCCCAATCTAAAAAAAAATATGATCTTACAAATTTGGTTATTTTTCGTATGGTTAGATACTTAGATGCATATGTATTTGTAGCTATCATCATTTACTTGTGTATAGTTGCTTATAAAGGGTTTTTGGGAGTATCTTGTTGGGTAATGTGATCTGTTATCTTCTAATCTTGTTATGCTGTGGGATTTTTATGCAGTGATTTTCAAAGGAAAGAAAAGTTAAGAATGCGAGACGAGGTGAGAGCGTGAGAGCCATATTACATCTATGAAAAAAGGCAAATGAAGGAGTTATTACGCGCATGAAGGAAGAAAAATGAAGGCGCCCATTTCAATTTAGAAGACATCTGATAATCTCAAGAGGTACCCCTTTTCATTATGAGATCTCTACGTCCCTTTTTTTAATCTAATTTCTCAACCTTAGTTTTTTGTTTTTGGTTGAAATTGGTACAAAGCTTCATGTATTGGTTTTTGCTGTTGTTGTTTTTACTTTTATAGTTAGTTTGTGTTTGATTGTTACTGGGCTTGTATTTCAGAGTATGAAGATGGTGGAAGGCAAGTGGTCCCTCGTACTATCAGGCTTGCAATGAAGAAAGTCGACAATGCAATCATACTAAGCCATATTCTTTCTCCTCGTCGAGTGAAAACAGACAAGAAGCAACGTCAATGACCACTGCTGTTGTATATAGTCAGAAGGGGTTAGTTTTTCATGCTTCTATATAAAAAAAATCGTTTGAGATGCTCCGGTTATTTGGTTTTCGTAATTTCTCTAAACTTTGATCTTGCTCCATTAAACTAGCGCGAAAAGTTAAGTTTTGTGTATTCTGAGTGAGGTTTTATAATTTTATGTCCTTAGTCAGAATTGTTAAGTATCTTCATAAAATGTATGAATTATAAATGGCAAAAGAGGTTAGGACAGGGATATGGAGTTGGAGAGGAAGTGGGAGGTGAGGGAGAAATGAGAGGTAGGCGGGTAGCTATAGAAACAATTTATCGTTACGTTTTCCTAATTTGTGTAAGCATGAACGTTTGAAAACTCGGAGAAATTAGAGTATTTAGAAAGATCTCAAGAAAATCAGAAACCATGAATTCCAAAGATTATTGAAAGGGGATTCACAGGTTCATGCTTACTAGCATGTGGAATTCATATGTTTGCAAGTTGTTGGAGCAAGTATGTGGACGAAATAAAGGAAATTCGAAAACATGCAAACAAAGAGGGGGGGGGGAGGAGCAGTAAACAAGACAGTACAATGAAGAGTCCGGGAAAATGTGGGGCAGAGCTGGGGAACAGATTAAAACAATCTCAGGTGCAATTGTCGTTCCTACTTTATCAGTCATAATGATAAGCTAATCATCTATGAGGTGGAATTTATTTTGTTTTGTCTCGACACTGTATTCATATTTTACATTATACGTGAGTGGAAGGAGAATTTTTAACAATGCAAATAAAAAATTCAAATTTTTTTTAACAATGCCTGACTGGTTTTAACAATGCAAAGTGAATTTTTTGATTTTCCTTTCTTCTCCTGGAATCTGATAGAATTTGAGTAGGTGTTATTGTGTTTTAATTATTCCTGCTTTTTCCAATAACTTTTGTTCAATTTACACTGTTCCTACTGTAAATGTCAGTCTTGATGATGATTTGATTCTATTGAACTTCAGTGAATTCATTGATAATGATTTTACTGAACATTATTGAATTTAGGGAGTCTGATGAAGTGATGATGTTCTTTGATTAGTGGAGTAGTTCATTCTTATTTCTTACAATTGAATTTCTTGTTAGTTGATTTGAATAGTTGATTTGGAAATTTCTATAATTGTTCTAAGAATTCGTAACTTCATTCTTTTAATGAATTGCAGCAGATATCGATGGTGTTTCCTCCTCATACCATCTGCTCGTCCCAATCGATGTTGGCGAGGTTAGATTTTGATTATATCAGTATTAAATTCTTGAATATCATTTTCCAGTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTATTTCTATTGCTCTGCTCTAATGCAACTTCCTGCCTGAATATTGAAATATGTATTATTCAAACTCATACAGATTTCTCTTCCCGAACCACAAGAAAACAAAGTAATCAGGTTGGTATATATGAATATTTATATTTAAGAGGAGATATTCTAATGAATTAATTATACATTTACTAAACTCATATGATCTTAGGTCTTAATTTGTATAGTACGAGCATAACCAAAGTATAATTAGTCCTTGATGTGGTAAATGCTCTTAGACTCTGTTGTATGGATTACTGTGTGTTATCGAGAAATAACTCCAGGTTCATCTCCTTTTCCTTCTTTCTTTTTGCAGGTTATGAGAGCCAATGCAGATAGAGTAAACTTTGAGTCTTGATGGTTGCGCATGTGCATGAGATTATAGGTGATAATTTGTTGTCTAACAACTAACCTCAATTCTTAATATGATTTATTTTGTTATACATTAGCTTGTTAGTTAGGTACAACTTACAGATGTCAGGACCCATTGCCGCATAGAAAGAAATTGACTCTTATTCTATTCAAATAATAGTGGTCTCCTTCCACTCACGTATTTTTCTCTTGGTGGCTCTACTATCAATTTGTTTATGGGAGTAATATCTGTCCTGGTTTTGAGTTTGTTTATTAGATAACGTGTGCTCGTTACTCATTTCCTCCCAAATCAGCTGATATCTCTGAATGTCTAAATACTCATTTCCACTCACGTAACTTTTTTATGATTTGCGTACCGTCTAATAACCGAATGACTATAACACAGTCCATTTATGAGTGGTTTCTTTATTGCACTTATTTATTCTTTCACGCTCCTATCCTTTTTTAGGCAAGAATGGATCAACTAAAGCTTATGGGTCCACTCATTTTGACCGGAATTCTTAAGTCTCTTTACGGGACTAACAATCGGGAAGCAGGTATATTGCAAAAAAAAAGTTCTCTGTGCTATTCTTCGCTAGGTTTTTAATATTTGTATAGTTTGTTAACTTTGTAATGCTTAACCTTTGTTTAACAGAGACATAGTCTTTGCATACTTACTGATGCGTTTGTTCAGATACTATATCTCGGGAGACCAGGACATTTGCTTATCAAGCAATTGGAATTCTTGCGCAGCGTATGCCTACGTTTTTCAGGTAATCACTGAGGACATTCCTCCATTGCGCAATTCCCTTGGTACCATCTTAATTCTCTTGTGGAAAGCTTTCTGATCATAACTGCTTCTTTCAGGGATAAGATAGACATGTTCGTTCGACTTTTTGATGCTATGAAGTCTGATCGAGTCTCAATTTCTCCGTTTAGTTATTCAAGAGGCTACAAGTTCCCTGGCTACTGCTTCTAAGGTAATATTTGTTCTGCCTGTATTCCTAGCTCTAACCTCTAAGGATATTAACATTACTTTGATGTTAATTTGTTGTTTTATTTCTCTTCCACATGTTTCTTCCGTGCATTCTTAGTTATCCTGATTGTCGATACTTTCATTTTTGAAAGGGAGGTGTGGGGGCTTTCTTTCTTGTCAGTACCCCTCACTTGTGATTGTTAACGACTTGTATATGTCGGTTGGATTTTTCGACTGTGCTGGTAAACTTCATTGCTTTTTCTTTGTTCAGTGGAACTCCTTTGAAATAGGATTTCCTATAATACTTGTTTCTGGGCTCAGTATTCCTTTCTCTTGCTCTTACCTCTGAATAATAACTGTGAACATCAGCATCATTAATCATATTAAAAGCTTTGGAGAAACTCTTGCTTGATAATTCCCAAGTGGTAATATATATTATTTTGTTTGTGCTTCTATCTACTGTTTGTTCATCACCTTGTCGTTTTTTAATCCCTTTTCCTGAAATAAATTCTTTTAAAAATGTTCTGAAGGACAAAAGTGAGGTGCGATTTTATGTTGTGAGGTGGGCGACATCATTGTTTGATTTGCAGCGCTGTCCTAGCCGTTTTTTTATGTGTGGTTGCTGCTGCTTTTCTTTTGATCTACTATGTTTTTTTGTTTCCAAGGTCTTTTTTAGCTGATCGTTTAACTTTTTAATTGGTTTATAAAATTATCACGTCACAATCATCGGCGTATCCTATCCTAACACTTATAAAGCTTCATACTTTAGTTTTAATTTGTTTTAAACAATATCCTATAAAGCAATATCCTATAAAACAATATCACACTTATAAACAATATCCTATCCTAACACTTATAAAGCTTCATACAATTTGTTTTAATTTAATCTTGGAATTGGAACTGTTCATGAAGTTTGCAAATGATGTAATTAATTAATAGGTTATCATATCTTAAAAATTGATAAAATTCTTTAGATTGTCACTACCTCTAAGGCATCACTATTTTTTCTCCGGAAAGCCTAATGATTGCAAACCAGAACAGAGATATGAATTGTTGTCTCTTGTTGTAACTAAACCATAATTGATTGTGCTCAAAGAGCTTCGTATGTAATCACTATTCTTTCGCATCGGCAATGAAGGCTCTTCGTTTGCCAAAGTTATCAATTCTTAATTTGTTTTACAAATGTGATTCATTTTATAGTTGTTATAGAAAATGACAACAAATTAGAGTCTCTGAATCGCTTATCTTAGCGTCTTTAGCTTTGTACATTGCCAGAATAGTACGGAATTGATATTCTTTGTGGTGGTTTTAGCTGACTATAGTCCAAAGTGGTCTGATTATACAAGTGACCAAAAACATGTAGATCTATATTATATGAACTTAGGTATAGCTAAAATTAGAATATAAGATGAATTTGATGCAAGGATGGCTTGTGTATTCTTGCATTAATTTTATTGATTTTGCTTATTAATCTATTAAGATTGTATGGGATATGGTTGGCAAATCTGAAAGAACTCGGGATGAAGTTGGCAAATCTGAAACAACTCGGGATGAGATGTTACTTGAGCTGGAGCAAGAGTGCCTAGAAGTATACAGGAGAAAAATTGATGTGGAAAATCACTACAGAGTTCAGCAACTACGAGAAATGATTGTTCAAAGGTGGAGCTGGCATCCATATCTTCTGCAATAGGAGAGAGACATTCGGCAGGTAAGGAACTCTAATACTATTCCCACAATTCATAGTGTAGCTGTTGACGTTTCTTTACAATGCAGATACTACTGGATGTCGTTCATGTATTCAACGAAGTCTCTTCTCTTGCTCAGAAAAAAGCAGTCCATAAAAGTAACTCAGAACGGAATCGAGGTATATATTGCTTCATCAGTTCATCACAAGTTCTTTTTTCTGTCCTCTACAACTGTTATAAGGACCTTTTGCCTCAACTGTTACGTCCACCTCTGTGCAATTTTCCATTTTCTCATCCGTACACTTACTCTCTTTTACAATTACCTTTAAGGTTGTATGTGCTGGTTGTCATTTTTGTTGCTTGGGGTTGTGTCCCTCACTGGCCTCAAATTATTCAAGCACAATGTTTTTGTTTCACACTGAGATTTATCAGCATCAGTATTTGATCCTTTCTCATTCTCTCTTTGTTCATACCAATCATAACCTTCAAGGGAACTCGTACTTTTTCAGATTAGATGCTTGATTAAATTTGCAACTCGACCTATCTTCTATTTCTTTCAGATTGATAAAGTTCTGATTGCCCAATACATTGTAGATCAATGTTTGGATTCTTTAATATGTAGGCATAGTGATTCTAAAAGTGGAATAAAGCGTATTGGAAGTTTTTCAACTGGTGATGTTGACATAGCAGATGTTTACCCTAAACCCTTTACAACCAGGCTTTCTGTTTTATGAGAAGTAAACTCATTAGGAGCTAAGATTAGAAAAAAAAGGTAATTTCCATGAACCTGTAGTTCTCTTTTCTTGATGTACGAAGTAACTTGAGAATGATTAACCTAACATGACATGTATTTGTATCCAGTTTTGGTGTTCTATATAGGCATCTAGATGATCTTTTTGATGCCATGTAGCCCACTTGACTGTGTGGCGTATCACTCACTTAAAATACCAGGGTTTAGTTTCCCGCCTCGTGCTAGCCACCTAACCTAGAATCCTTACCTATGGGAATGAAAAACTTATGATTACCTTTCCAACCTAGAGATTATGCATGAAAGACATGCTGGGGAAGAAATAATTTTCATTGTCTTCTTAATGTTCAATACTTTACCTATGTTTATATATGAATTTAAATGCTAAATTTCCATTTATTTCACCTAAATTATGCCCCTGTATTATAGTCGTACCTTGGTAATTAGGGATTTTATTTTCGTTTCTCAAGATTATTTTTTCATTACATTATGAATTGTAGATTTAGGAGGTAGTAGGATCTAATTACAAGCTACGGAGAGTTTTAAAATAGGGCTCAGAGGATCCAGCCAATGATAATTATGTTGCAGTGCTGCTTGAATAGTGACAGTTTCAAGTAATCAACTTATCTATTTATTTGTTTTCTTATTTGTTTATATTGTGTTCTTTTCACAATACTGTTTAATTCATGCTTTGGTTAGGATAATGCTGCAGAACTCTTCAGACGAGCTTGCAAAATATTCAATACTGAGGCTGAGTTGGAAAGAATCTTATTGAACTGATTCATCTTTTCTCAGGACAATGAAGTTGTTTCTGATTACTCCCACTGTTATAGTTGCACATATGGGACTTCTTTGGAAGGACAAGTCATTTTTTTGTGAATGACTGCAACTCACCTCCAAAGGATATTCATCGTCAATCTGATCAGGAGGTAAATTGTTGATAATTTGTACTTTTGAACTACTTGACTACGGTAAATGCTTGCCTGGACTTGAGACCTCAATTGCATTTATTAGATTCTTTTATTGTAGGCTTCCATTCTTTCATTATCTTTTTAGATTTTCATCACATATGATGAAAACTTCTTTTTTAAAGGGGACCCCGTAAGAAATCTGTTGGAACTTATGTCTTACTCATATCTCAGCAAGCTAACCCTACCAAACCTTCCCCGAATTGTGTATTTCCACACTGAAGTAAATAACAGGAGAAATGTTCAATAACCACTGTATGAAAGGAACTTCTGAAAACAGAAAGGAAGGGACTTATGTCAGGTGGAAGAGATCATATGCTGCATGTAAAGTCATTTGTGAGCTGTGATACATTTTGGACCCGATAAGTTGGCAAGCTGTGATATGCTTGGTGACCTAATGTGGTTAGCTCGTTCAAGCTTATGCGAATTGATATTTTCTTATCACATCTTTCACCTTAAAAAGTCAGTAACATGCTTTAGAAACTAAATGTGTTGACGGGACCATCTTGCGTCGTTTGCTCCAAATCCTCATGTCTCCTTTTTAATCGCTAATTTTTAAACACTGATCCTCATTGTTTGGACGGGTTTCAAATGAGTTCAGTTAGGTAGAATTTGATTGCCCTTTGTTTAGTTTTGGGACTGAGTTAGCCAAAAAAGGGATCAGGGGAAATATTTTGGTATTTCGGTATTCTCACAGCTGGCAGGAGTGTATTAGGGCTTTTGTCATTTTATAATTTCTCATACAAATGACCCTTCATTGAGAGGGGAAGTTGTAAGATACGAGAGAATAAAAAAAGAGTATTAAGAAGAAAAGTCTGTGTCCTATTATTCGATTGATGAAAACAAATTTGCCCAAAGGTATTTGTTCATTGTTTGCCCTGTCTGCCTTTTTAAAATTTTGTTTTTGGTTATCTTGCACAGATACTTCTGGAATTACAAATTTATGGGTTGTCAGATTCTCCAAGTCCAGGGATGGGAAGAGAGACAAGTTCTCCGAGATGGCTAATGTTGCAGGTTCCTCTTCCAGTGCATCCACGACAATGAATGGTAGTACTGGAAATAGTTACTGTTTCCCTAGGACTAATTCTTTAACTTTTAGTAGTAGCCCAGTCGAATCAGGTTCTCCGGGCTTGAGTGGATTGCAAAGTCTCGGAAATACATGTTTTATGAACAGTGTGCTTTAGTGCTTAAAACACACTCCTAAACTTGTTGACTATTTTCATGGAGTTTACAATAAAGAACGTTTGCACTACCCTGATGAACTTGTATTTGAGGGATTTATATATATATGTAACCTACATCAAGTAATTAGTTGCGTTTCTTATCATCTACGGAATAATGTATTCATGCTTATGATTAATTAGGCTTGTGATTTGCATAGAGTTTCGGGAGATAATTTTTTATATCTTGGGGGAACGTGCGCGCTAGCGCACGTTCCAACAACTAGTTTCAGCTAAAAGGTCAAGTTTTGGGGCTTCGATTTCTACGTGCGTCCCGTTGGAAAAAAGAAAGAGGACGTGCTCTCTTTGTAATGCTGAAGGATTATATGCTCTGTTTTATTAACATACAGTTTTAGGTTGAGAGGAGTGTTTTTGTGTTTTTTCAACTAATAAACATACAAGCAAACAATGGAAAGTTAGACAAGGGGAGTATTATAACCAACGCGTGTCATGAACGATTATGTACAAATCCTACAAATGAAATGTAAAAAAAATAACAAAAACAATAATAAATGATACAAGTGTTTGTGAGGAATTTATATTTCTTCTCCTCAAATAATATCATATCGTATTATTAAGTTCATGCAAAATAATACAATAACGCCTCAATTGATGATTACTCTCACCAATGTATTTTCACTCTTATTTTCTAGCTAGGCCTTAACCCCCTTTTATAGGTTAAACTAGAAACCTTCATCTACTAGAATTATACTTGCTTCCCAAGACGTAATAATTTTAGAGATTGTTACATACCAAAACATATCTAATTTCCTAATTACAATATACGTTAAACTAGGAAACCAAAATAATTAACAAAATAAACAATATGTCAAACCCAAAAGAATTCGCAATTTAGATGGTGGACCGTACTTGTCGGCATCCGGAGGATCAACATACTCCTTGTTTATGTCTTCCAACAAACCATGATCCACAATTACAATACTTTTGCCCATTTCCTTTTATGTAATCTTCCTTTTTTTTCCATTACCATATTTTTAAGCAACACATCATCGTCATCTCCATTACACCTGTGTTCCAAATCAAAAGAACAATTAATTAAAATCATTATTCAAATTAAAGAAATTGGTATCTCAAAATACTATGTAGTCTATCAAGTAACAATTAATTCATTATCAAGTGTTTGTCCTTGAATGATTATCCCCTAATATCAAGTAACATAATGATAGACTACATACGGTAATTTTAAAGACACAAAATTCCTTTATTTTGAGTCTTAACGCACTTCTCTAAGGGGACTAGTAGAAAAAATGTCAATTGCAACACCGCATTCACAACCCTTATGATGAGTCAACGCTGCAAAAACAATTAGTCAACGCAGGTCAATGATTTAATGAATTATTTGCACCGTTGTTTAGCCATAAAGGCTGCTAATTGGCTGGAAAAAAAATAGAAAACGTATTACTAGCGCGTACAGTGCATGAAAGCTGCGAATTAGGTGTTTATCACAACTTAGCTCTCGATCTACACGCTGCGATAAAACTCTCCAGATCTGAAATGTAAACCTAGCTTTCATCCTTTTCTTTCTCGAACTCTCCGCTCAGTTTCACATTTTCTCCCTCAAACCCTAGAATTATTTCATCGATCTCTCTCTCTCTCTCTCCTTTAGATCAATTCTTTCTCCCCATGAAGTGTAAGTTTCCCACTGATTTCATGGGAGATTTGGCAAGTTCCGACGCCAAATGCTGCTTTCTCGACATTTCCCCCGAAGAATGAGGGAATTTGGGACCGACAGTTGACTCTTTATTCCCGAATATTGTAGAAACTCCTCCATATCTGCCGGACTTCGAAGGAACACCGACGTTATTACCAAAGATGAACAGATGCAGAGAAAATCAATCTGGTAGTGTGCTAAATTTCATCCACCACACACATTTTTACTTCTCATTCTCCGACGGTGGCATTAGTGGCCTGCTCATCGGCTTATTCCAGAAGGTTGAAGGTATTCGTGATTTTAAATAAATTCATTGGATTGGTCTATGATTTTGCCCAAAATTTAAATTTTAGGGTTCTTAATTGTAAATTGGAATTTTAATTAAAACATTTGATATTATTTGGAAGTGTTTAATGGGCTTAATATTTGATATTATTTGAAGGTTCAAAGCAGAATTCAAACCTACGAGTAGATCAACAAAGATGA

mRNA sequence

ATGCGGATGCTCTCTATCACTACACTCCTAACAATGGCGAGTGAGCTTTTCTTACTCACTGCACTCCTTCCGAATCTCCTCACTTCACTTCATCTTGTTTCTCCCTGTGATTTTCAAAGGAAAGAAAAGTTAAGAATGCGAGACGAGCAGATATCGATGGTGTTTCCTCCTCATACCATCTGCTCGTCCCAATCGATGTTGGCGAGAGACATAGTCTTTGCATACTTACTGATGCGTTTGTTCAGATACTATATCTCGGGAGACCAGGACATTTGCTTATCAAGCAATTGGAATTCTTGCGCAGCGTATGCCTACGTTTTTCAGATACTACTGGATGTCGTTCATGTATTCAACGAAGTCTCTTCTCTTGCTCAGAAAAAAGCAGTCCATAAAAGTAACTCAGAACGGAATCGAGATACTTCTGGAATTACAAATTTATGGGTTGTCAGATTCTCCAAGTCCAGGGATGGGAAGAGAGACAAGTTCTCCGAGATGGCTAATGTTGCAGGTTCCTCTTCCAGTGCATCCACGACAATGAATGGTAGTACTGGAAATAGTTACTGTTTCCCTAGGACTAATTCTTTAACTTTTAGTAGTAGCCCAGTCGAATCAGGTTCTCCGGGCTTGAGTGGATTGCAAAGTCTCGGAAATACATGTTTTATGAACAGTGTGCTTTATTTCACATTTTCTCCCTCAAACCCTAGAATTATTTCATCGATCTCTCTCTCTCTCTCTCCTTTAGATCAATTCTTTCTCCCCATGAAGTGTAAGTTTCCCACTGATTTCATGGGAGATTTGGCAAGGAATTTGGGACCGACAGTTGACTCTTTATTCCCGAATATTGTAGAAACTCCTCCATATCTGCCGGACTTCGAAGGAACACCGACGTTATTACCAAAGATGAACAGATGCAGAGAAAATCAATCTGGTAGTGTGCTAAATTTCATCCACCACACACATTTTTACTTCTCATTCTCCGACGGTGGCATTAGTGGCCTGCTCATCGGCTTATTCCAGAAGGTTGAAGGTTCAAAGCAGAATTCAAACCTACGAGTAGATCAACAAAGATGA

Coding sequence (CDS)

ATGCGGATGCTCTCTATCACTACACTCCTAACAATGGCGAGTGAGCTTTTCTTACTCACTGCACTCCTTCCGAATCTCCTCACTTCACTTCATCTTGTTTCTCCCTGTGATTTTCAAAGGAAAGAAAAGTTAAGAATGCGAGACGAGCAGATATCGATGGTGTTTCCTCCTCATACCATCTGCTCGTCCCAATCGATGTTGGCGAGAGACATAGTCTTTGCATACTTACTGATGCGTTTGTTCAGATACTATATCTCGGGAGACCAGGACATTTGCTTATCAAGCAATTGGAATTCTTGCGCAGCGTATGCCTACGTTTTTCAGATACTACTGGATGTCGTTCATGTATTCAACGAAGTCTCTTCTCTTGCTCAGAAAAAAGCAGTCCATAAAAGTAACTCAGAACGGAATCGAGATACTTCTGGAATTACAAATTTATGGGTTGTCAGATTCTCCAAGTCCAGGGATGGGAAGAGAGACAAGTTCTCCGAGATGGCTAATGTTGCAGGTTCCTCTTCCAGTGCATCCACGACAATGAATGGTAGTACTGGAAATAGTTACTGTTTCCCTAGGACTAATTCTTTAACTTTTAGTAGTAGCCCAGTCGAATCAGGTTCTCCGGGCTTGAGTGGATTGCAAAGTCTCGGAAATACATGTTTTATGAACAGTGTGCTTTATTTCACATTTTCTCCCTCAAACCCTAGAATTATTTCATCGATCTCTCTCTCTCTCTCTCCTTTAGATCAATTCTTTCTCCCCATGAAGTGTAAGTTTCCCACTGATTTCATGGGAGATTTGGCAAGGAATTTGGGACCGACAGTTGACTCTTTATTCCCGAATATTGTAGAAACTCCTCCATATCTGCCGGACTTCGAAGGAACACCGACGTTATTACCAAAGATGAACAGATGCAGAGAAAATCAATCTGGTAGTGTGCTAAATTTCATCCACCACACACATTTTTACTTCTCATTCTCCGACGGTGGCATTAGTGGCCTGCTCATCGGCTTATTCCAGAAGGTTGAAGGTTCAAAGCAGAATTCAAACCTACGAGTAGATCAACAAAGATGA

Protein sequence

MRMLSITTLLTMASELFLLTALLPNLLTSLHLVSPCDFQRKEKLRMRDEQISMVFPPHTICSSQSMLARDIVFAYLLMRLFRYYISGDQDICLSSNWNSCAAYAYVFQILLDVVHVFNEVSSLAQKKAVHKSNSERNRDTSGITNLWVVRFSKSRDGKRDKFSEMANVAGSSSSASTTMNGSTGNSYCFPRTNSLTFSSSPVESGSPGLSGLQSLGNTCFMNSVLYFTFSPSNPRIISSISLSLSPLDQFFLPMKCKFPTDFMGDLARNLGPTVDSLFPNIVETPPYLPDFEGTPTLLPKMNRCRENQSGSVLNFIHHTHFYFSFSDGGISGLLIGLFQKVEGSKQNSNLRVDQQR
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo05451Spo05451gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo05451.1Spo05451.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05451.1.CDS.9Spo05451.1.CDS.9CDS
Spo05451.1.CDS.8Spo05451.1.CDS.8CDS
Spo05451.1.CDS.7Spo05451.1.CDS.7CDS
Spo05451.1.CDS.6Spo05451.1.CDS.6CDS
Spo05451.1.CDS.5Spo05451.1.CDS.5CDS
Spo05451.1.CDS.4Spo05451.1.CDS.4CDS
Spo05451.1.CDS.3Spo05451.1.CDS.3CDS
Spo05451.1.CDS.2Spo05451.1.CDS.2CDS
Spo05451.1.CDS.1Spo05451.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05451.1.exon.9Spo05451.1.exon.9exon
Spo05451.1.exon.8Spo05451.1.exon.8exon
Spo05451.1.exon.7Spo05451.1.exon.7exon
Spo05451.1.exon.6Spo05451.1.exon.6exon
Spo05451.1.exon.5Spo05451.1.exon.5exon
Spo05451.1.exon.4Spo05451.1.exon.4exon
Spo05451.1.exon.3Spo05451.1.exon.3exon
Spo05451.1.exon.2Spo05451.1.exon.2exon
Spo05451.1.exon.1Spo05451.1.exon.1exon


Homology
[Close]
BLAST of Spo05451.1 vs. NCBI nr
Match: gi|902155107|gb|KNA05877.1| (hypothetical protein SOVF_186300 [Spinacia oleracea])

HSP 1 Score: 122.9 bits (307), Expect = 1.200e-24
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 1 

		  

Query: 153 KSRDGKRDKFSEMANVAGSSSSASTTMNGSTGNSYCFPRTNSLTFSSSPVESGSPGLSGL 212
           KSRDGKRD+FSEMAN AGSSSSASTTMNGSTGNSY FPRTNSLTFSSSP ESGS GL+GL
Sbjct: 228 KSRDGKRDEFSEMANAAGSSSSASTTMNGSTGNSYRFPRTNSLTFSSSPAESGSLGLTGL 287

Query: 213 QSLGNTCFMNSVL 226
           Q+LGNTCFMNS L
Sbjct: 288 QNLGNTCFMNSAL 300
[Close]
BLAST of Spo05451.1 vs. NCBI nr
Match: gi|731348397|ref|XP_010685465.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 109.8 bits (273), Expect = 1.000e-20
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 1 

		  

Query: 106 VFQILLDVVHV--FNEVSS--LAQKKAVHKSNSERNRDTSGITNLWVVRFS---KSRDGK 165
           +F I  +++H+  F+  +S  L         + +R  D   +  L +   S   +SRDGK
Sbjct: 171 IFNIEAELLHIRDFSGRTSHYLMSDNGSPPKDIQRQSDQEILLELQIYGLSDSPRSRDGK 230

Query: 166 RDKFSEMANVAGSSSSASTTMNGSTGNSYCFPRTNSLTFSSSPVESGSPGLSGLQSLGNT 225
           RD FSE+A+ AGSSSSASTT NGSTGNSY FPRTNS TFSSS VESGS GL+GLQ+LGNT
Sbjct: 231 RDDFSELASGAGSSSSASTTTNGSTGNSYRFPRTNSYTFSSSSVESGSLGLTGLQNLGNT 290
[Close]
BLAST of Spo05451.1 vs. NCBI nr
Match: gi|778716783|ref|XP_011657595.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 3.400e-8
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 1 

		  

Query: 132 SNSERNRDTSGITNLWVVRFS---KSRDGKRDKFSEMAN-VAGSSSSASTTMNGS--TGN 191
           SN +R  D   +  L V   S   K ++GK+D   E+AN + G+SS+ S  MNG+  TG+
Sbjct: 38  SNKQRQSDQEVLLELQVYGLSDFIKCKEGKKD---ELANSILGNSSATSLMMNGASGTGS 97

Query: 192 SYCFPRTNSLTFSSSPVESGSPGLSGLQSLGNTCFMNSVL 226
           + CF R NS  FS S  E+GS GL+GLQ+LGNTCFMNS L
Sbjct: 98  ASCF-RVNSSVFSGSSREAGSLGLTGLQNLGNTCFMNSAL 133
[Close]
BLAST of Spo05451.1 vs. NCBI nr
Match: gi|449444827|ref|XP_004140175.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 3.400e-8
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 1 

		  

Query: 132 SNSERNRDTSGITNLWVVRFS---KSRDGKRDKFSEMAN-VAGSSSSASTTMNGS--TGN 191
           SN +R  D   +  L V   S   K ++GK+D   E+AN + G+SS+ S  MNG+  TG+
Sbjct: 197 SNKQRQSDQEVLLELQVYGLSDFIKCKEGKKD---ELANSILGNSSATSLMMNGASGTGS 256

Query: 192 SYCFPRTNSLTFSSSPVESGSPGLSGLQSLGNTCFMNSVL 226
           + CF R NS  FS S  E+GS GL+GLQ+LGNTCFMNS L
Sbjct: 257 ASCF-RVNSSVFSGSSREAGSLGLTGLQNLGNTCFMNSAL 292
[Close]
BLAST of Spo05451.1 vs. NCBI nr
Match: gi|659097402|ref|XP_008449606.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X1 [Cucumis melo])

HSP 1 Score: 67.8 bits (164), Expect = 4.400e-8
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 1 

		  

Query: 132 SNSERNRDTSGITNLWVVRFS---KSRDGKRDKFSEMAN-VAGSSSSASTTMNGS--TGN 191
           SN +R  D   +  L V   S   K ++GK+D   E+AN + G+SS+ S  MNG+  TG+
Sbjct: 197 SNKQRQSDQEVLLELQVYGLSDFIKCKEGKKD---ELANSILGNSSANSLVMNGASGTGS 256

Query: 192 SYCFPRTNSLTFSSSPVESGSPGLSGLQSLGNTCFMNSVL 226
           + CF R NS  FS S  E+GS GL+GLQ+LGNTCFMNS L
Sbjct: 257 ASCF-RVNSSVFSGSSREAGSLGLTGLQNLGNTCFMNSAL 292
[Close]
BLAST of Spo05451.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QF22_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_186300 PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.100e-25
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 1 

		  

Query: 153 KSRDGKRDKFSEMANVAGSSSSASTTMNGSTGNSYCFPRTNSLTFSSSPVESGSPGLSGL 212
           KSRDGKRD+FSEMAN AGSSSSASTTMNGSTGNSY FPRTNSLTFSSSP ESGS GL+GL
Sbjct: 228 KSRDGKRDEFSEMANAAGSSSSASTTMNGSTGNSYRFPRTNSLTFSSSPAESGSLGLTGL 287

Query: 213 QSLGNTCFMNSVL 226
           Q+LGNTCFMNS L
Sbjct: 288 QNLGNTCFMNSAL 300
[Close]
BLAST of Spo05451.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BYC9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171320 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.100e-21
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 1 

		  

Query: 106 VFQILLDVVHV--FNEVSS--LAQKKAVHKSNSERNRDTSGITNLWVVRFS---KSRDGK 165
           +F I  +++H+  F+  +S  L         + +R  D   +  L +   S   +SRDGK
Sbjct: 171 IFNIEAELLHIRDFSGRTSHYLMSDNGSPPKDIQRQSDQEILLELQIYGLSDSPRSRDGK 230

Query: 166 RDKFSEMANVAGSSSSASTTMNGSTGNSYCFPRTNSLTFSSSPVESGSPGLSGLQSLGNT 225
           RD FSE+A+ AGSSSSASTT NGSTGNSY FPRTNS TFSSS VESGS GL+GLQ+LGNT
Sbjct: 231 RDDFSELASGAGSSSSASTTTNGSTGNSYRFPRTNSYTFSSSSVESGSLGLTGLQNLGNT 290
[Close]
BLAST of Spo05451.1 vs. UniProtKB/TrEMBL
Match: A0A0A0KEX1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G426930 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.400e-8
Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 1 

		  

Query: 132 SNSERNRDTSGITNLWVVRFS---KSRDGKRDKFSEMAN-VAGSSSSASTTMNGS--TGN 191
           SN +R  D   +  L V   S   K ++GK+D   E+AN + G+SS+ S  MNG+  TG+
Sbjct: 197 SNKQRQSDQEVLLELQVYGLSDFIKCKEGKKD---ELANSILGNSSATSLMMNGASGTGS 256

Query: 192 SYCFPRTNSLTFSSSPVESGSPGLSGLQSLGNTCFMNSVL 226
           + CF R NS  FS S  E+GS GL+GLQ+LGNTCFMNS L
Sbjct: 257 ASCF-RVNSSVFSGSSREAGSLGLTGLQNLGNTCFMNSAL 292
[Close]
BLAST of Spo05451.1 vs. UniProtKB/TrEMBL
Match: A0A0B2QDA6_GLYSO (Ubiquitin carboxyl-terminal hydrolase 8 OS=Glycine soja GN=glysoja_035080 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.000e-7
Identity = 50/96 (52.08%), Postives = 59/96 (61.46%), Query Frame = 1 

		  

Query: 135 ERNRDTSGITNLWVVRFSKS---RDGKRDKFSEMANVAGSSSSASTTMNGST--GNSYCF 194
           +R  D   +  L V   S S   R+GK+D   EMAN +GS   AS  MNG+    NS C 
Sbjct: 206 QRQSDQEILLELQVYGLSDSIRCREGKKD---EMANFSGS---ASLKMNGTYDGANSDCM 265

Query: 195 PRTNSLTFSSSPVESGSPGLSGLQSLGNTCFMNSVL 226
              NSLTFSS P E+GS GL+GLQ+LGNTCFMNS L
Sbjct: 266 -NANSLTFSSGPGEAGSLGLTGLQNLGNTCFMNSSL 294
[Close]
BLAST of Spo05451.1 vs. UniProtKB/TrEMBL
Match: V7BVG0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G117700g PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.000e-7
Identity = 50/96 (52.08%), Postives = 59/96 (61.46%), Query Frame = 1 

		  

Query: 135 ERNRDTSGITNLWVVRFSKS---RDGKRDKFSEMANVAGSSSSASTTMNGS--TGNSYCF 194
           +R  D   +  L V   S S   R+GK+D   EMAN +GS   AS  MNGS  + NS C 
Sbjct: 205 QRQSDQEILLELQVYGLSDSIRCREGKKD---EMANFSGS---ASLKMNGSFDSANSDCM 264

Query: 195 PRTNSLTFSSSPVESGSPGLSGLQSLGNTCFMNSVL 226
              NSLTFS  P E+GS GL+GLQ+LGNTCFMNS L
Sbjct: 265 -HANSLTFSLGPGEAGSLGLTGLQNLGNTCFMNSSL 293
[Close]
BLAST of Spo05451.1 vs. TAIR (Arabidopsis)
Match: AT5G22030.2 (ubiquitin-specific protease 8)

HSP 1 Score: 50.1 bits (118), Expect = 3.400e-6
Identity = 38/119 (31.93%), Postives = 58/119 (48.74%), Query Frame = 1 

		  

Query: 161 KFSEMANVAGSSSSASTTMNGSTGNS-YCFPRTNSLTFSSSPVESGSPGLSGLQSLGNTC 220
           K  E     GS+   +   NG  G + + F R+NSL+F     E+G+ GL+GLQ+LGNTC
Sbjct: 271 KLKESKKEDGSTQQTNGITNGMNGGTVFRFGRSNSLSFLGKAGEAGTLGLTGLQNLGNTC 330

Query: 221 FMNSVLYFTFSPSNPRIISSISLSLSPLDQFFLPMKCKFPTDFMGDLARNLGPTVDSLF 279
           FMNS L        P+++         L ++   +    P    G++A   G  + SL+
Sbjct: 331 FMNSSLQCL--AHTPKLVDFF------LGEYSKEINLDNPLGMKGEIALAFGDLLRSLW 381
The following BLAST results are available for this feature:
BLAST of Spo05451.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902155107|gb|KNA05877.1|1.2e-2489.0hypothetical protein SOVF_1863... [more]
gi|731348397|ref|XP_010685465.1|1.0e-2055.1PREDICTED: ubiquitin carboxyl-... [more]
gi|778716783|ref|XP_011657595.1|3.4e-849.0PREDICTED: ubiquitin carboxyl-... [more]
gi|449444827|ref|XP_004140175.1|3.4e-849.0PREDICTED: ubiquitin carboxyl-... [more]
gi|659097402|ref|XP_008449606.1|4.4e-849.0PREDICTED: ubiquitin carboxyl-... [more]
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BLAST of Spo05451.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QF22_SPIOL8.1e-2589.0Uncharacterized protein OS=Spi... [more]
A0A0J8BYC9_BETVU7.1e-2155.1Uncharacterized protein OS=Bet... [more]
A0A0A0KEX1_CUCSA2.4e-849.0Uncharacterized protein OS=Cuc... [more]
A0A0B2QDA6_GLYSO2.0e-752.0Ubiquitin carboxyl-terminal hy... [more]
V7BVG0_PHAVU2.0e-752.0Uncharacterized protein OS=Pha... [more]
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BLAST of Spo05451.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05451.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G22030.23.4e-631.9ubiquitin-specific protease 8[more]
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