Spo05563.1 (mRNA)

Overview
NameSpo05563.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionAT hook motif-containing protein, putative
Locationchr3 : 98652978 .. 98654319 (+)
Sequence length1173
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGATAAGCATCTCCCACTATGTAAAACAATTATTATTATTATTATTTATCACACTCATGTAAACACTTGCGAAAACGGTTAATGTAACAGTTTCAACTACAAGCAATTGTCAACAAACAAACCATATCTTACAACATACAACAGAAGTCGACAATTATCAACCACACCAAAATGACCAAAACAGTGAGTACTCCCATCAAACTTAGCACAAAACTGAAATTTTAAATAAACACTAAACATATTGCACTTTCATTTTAAGGGAAATACACTGAACCATGGAACTTTGGTGGCCCTAAACATACATGCTCTGACTGTGGGGGCAATTGTATGGTTTGAAGAGCGTGTCAAAAATGATTCTAATAAGACAATATCAAAGTATGGGATATGCTGCCAAAAGGGAAAAATTGTGCTGCCTTTGTTAAAAGACCAGGCAAGGATGTTAAACTCCATATTTGCATTCACCTCAATGGGCGGAAAGGTGGATAGCACAATAAATCGAGGTAGCTCACCATATGTATTCAGATTGAACGGGCAGAACCACCATAGAATAGGGTCATTACTGCCTCCTGCCGGCGAGCAACCAAGATTCACTCAGCTTTACATTTATGATACACAAAATGAAGTTGCTAACAGGATTAGTAGTATTGCTAATAATGGGGGGGAATCAGAATTGGATCCAAAAATTATCCAAGGTTTATCAAAGATGTTTGATGAGCACAATGAATTAACAAAATCATTCAGAATGGCAAGGGAAAGATTTCAAGAATCAGAGTTACAACCTGTTCGGCTTCGATTAATTGGCACAAGGGCAAAGGATGGAAGGCAGTTTAACCTACCTACATCGTCAGAGGTGGCTGCATTGATAGTGGGAACAAGTGACGATGAAAAGGGTAATCGTTATGTCATTATTGAACACAGGATGTATGGTCTAAAAAGAATTTCAGAGTTGCATCCCAGCTTCATGGCCATGCAATATCCATTGTTGTTCCCTTACGGTGAAGATGGATACCGGACAGATATACCCCATGCCGACGTAGATGAAACAACAAGGGCAAGAACAATAGTAACACAAAGAGAGTATTATGCATTCCGTTTCCAACAAAGACGCCATGAATCTAAAACAAGATTCCAGTTAGGAAGGCTCAATCAACAGTTCGAAGTGGATGCATTCACATGTGTACAAGAGTCAAGGTTGGAATGGGTTAGGACAAATAAATCAACAATACGGAAGGAAGTGTTCTGGGGACTTGCTGATGCAGTCTCATGGGGTGACACAACACCCGCATCTGTTGGGCAGCGCATTGTTCTGCCTTCGTCATTCACGGGAAGCCCGTAG

mRNA sequence

ATGTTTCAACTACAAGCAATTGTCAACAAACAAACCATATCTTACAACATACAACAGAAGTCGACAATTATCAACCACACCAAAATGACCAAAACAGGAAATACACTGAACCATGGAACTTTGGTGGCCCTAAACATACATGCTCTGACTGTGGGGGCAATTGTATGGTTTGAAGAGCGTGTCAAAAATGATTCTAATAAGACAATATCAAAGTATGGGATATGCTGCCAAAAGGGAAAAATTGTGCTGCCTTTGTTAAAAGACCAGGCAAGGATGTTAAACTCCATATTTGCATTCACCTCAATGGGCGGAAAGGTGGATAGCACAATAAATCGAGGTAGCTCACCATATGTATTCAGATTGAACGGGCAGAACCACCATAGAATAGGGTCATTACTGCCTCCTGCCGGCGAGCAACCAAGATTCACTCAGCTTTACATTTATGATACACAAAATGAAGTTGCTAACAGGATTAGTAGTATTGCTAATAATGGGGGGGAATCAGAATTGGATCCAAAAATTATCCAAGGTTTATCAAAGATGTTTGATGAGCACAATGAATTAACAAAATCATTCAGAATGGCAAGGGAAAGATTTCAAGAATCAGAGTTACAACCTGTTCGGCTTCGATTAATTGGCACAAGGGCAAAGGATGGAAGGCAGTTTAACCTACCTACATCGTCAGAGGTGGCTGCATTGATAGTGGGAACAAGTGACGATGAAAAGGGTAATCGTTATGTCATTATTGAACACAGGATGTATGGTCTAAAAAGAATTTCAGAGTTGCATCCCAGCTTCATGGCCATGCAATATCCATTGTTGTTCCCTTACGGTGAAGATGGATACCGGACAGATATACCCCATGCCGACGTAGATGAAACAACAAGGGCAAGAACAATAGTAACACAAAGAGAGTATTATGCATTCCGTTTCCAACAAAGACGCCATGAATCTAAAACAAGATTCCAGTTAGGAAGGCTCAATCAACAGTTCGAAGTGGATGCATTCACATGTGTACAAGAGTCAAGGTTGGAATGGGTTAGGACAAATAAATCAACAATACGGAAGGAAGTGTTCTGGGGACTTGCTGATGCAGTCTCATGGGGTGACACAACACCCGCATCTGTTGGGCAGCGCATTGTTCTGCCTTCGTCATTCACGGGAAGCCCGTAG

Coding sequence (CDS)

ATGTTTCAACTACAAGCAATTGTCAACAAACAAACCATATCTTACAACATACAACAGAAGTCGACAATTATCAACCACACCAAAATGACCAAAACAGGAAATACACTGAACCATGGAACTTTGGTGGCCCTAAACATACATGCTCTGACTGTGGGGGCAATTGTATGGTTTGAAGAGCGTGTCAAAAATGATTCTAATAAGACAATATCAAAGTATGGGATATGCTGCCAAAAGGGAAAAATTGTGCTGCCTTTGTTAAAAGACCAGGCAAGGATGTTAAACTCCATATTTGCATTCACCTCAATGGGCGGAAAGGTGGATAGCACAATAAATCGAGGTAGCTCACCATATGTATTCAGATTGAACGGGCAGAACCACCATAGAATAGGGTCATTACTGCCTCCTGCCGGCGAGCAACCAAGATTCACTCAGCTTTACATTTATGATACACAAAATGAAGTTGCTAACAGGATTAGTAGTATTGCTAATAATGGGGGGGAATCAGAATTGGATCCAAAAATTATCCAAGGTTTATCAAAGATGTTTGATGAGCACAATGAATTAACAAAATCATTCAGAATGGCAAGGGAAAGATTTCAAGAATCAGAGTTACAACCTGTTCGGCTTCGATTAATTGGCACAAGGGCAAAGGATGGAAGGCAGTTTAACCTACCTACATCGTCAGAGGTGGCTGCATTGATAGTGGGAACAAGTGACGATGAAAAGGGTAATCGTTATGTCATTATTGAACACAGGATGTATGGTCTAAAAAGAATTTCAGAGTTGCATCCCAGCTTCATGGCCATGCAATATCCATTGTTGTTCCCTTACGGTGAAGATGGATACCGGACAGATATACCCCATGCCGACGTAGATGAAACAACAAGGGCAAGAACAATAGTAACACAAAGAGAGTATTATGCATTCCGTTTCCAACAAAGACGCCATGAATCTAAAACAAGATTCCAGTTAGGAAGGCTCAATCAACAGTTCGAAGTGGATGCATTCACATGTGTACAAGAGTCAAGGTTGGAATGGGTTAGGACAAATAAATCAACAATACGGAAGGAAGTGTTCTGGGGACTTGCTGATGCAGTCTCATGGGGTGACACAACACCCGCATCTGTTGGGCAGCGCATTGTTCTGCCTTCGTCATTCACGGGAAGCCCGTAG

Protein sequence

MFQLQAIVNKQTISYNIQQKSTIINHTKMTKTGNTLNHGTLVALNIHALTVGAIVWFEERVKNDSNKTISKYGICCQKGKIVLPLLKDQARMLNSIFAFTSMGGKVDSTINRGSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYIYDTQNEVANRISSIANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVRLRLIGTRAKDGRQFNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMAMQYPLLFPYGEDGYRTDIPHADVDETTRARTIVTQREYYAFRFQQRRHESKTRFQLGRLNQQFEVDAFTCVQESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTGSP
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo05563Spo05563gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo05563.1Spo05563.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05563.1.exon.1Spo05563.1.exon.1exon
Spo05563.1.exon.2Spo05563.1.exon.2exon
Spo05563.1.exon.3Spo05563.1.exon.3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo05563.1.CDS.1Spo05563.1.CDS.1CDS
Spo05563.1.CDS.2Spo05563.1.CDS.2CDS
Spo05563.1.CDS.3Spo05563.1.CDS.3CDS


Homology
BLAST of Spo05563.1 vs. NCBI nr
Match: gi|731322483|ref|XP_010671914.1| (PREDICTED: uncharacterized protein LOC104888589 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 446.0 bits (1146), Expect = 6.500e-122
Identity = 224/364 (61.54%), Postives = 275/364 (75.55%), Query Frame = 1

		  

Query: 49  LTVGAIVWFEERVKNDSNKTISKYGICCQKGKIVLPLLK--------------------- 108
           L  GA VW EERVK +  K   KY ICCQKGK+ LPLLK                     
Sbjct: 124 LDCGARVWIEERVKRERAKDHPKYNICCQKGKVKLPLLKEPPEYLKSLLDPNSGTSTKFK 183

Query: 109 DQARMLNSIFAFTSMGGKVDSTINRGSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYI 168
           D  R  NSIFAFTSMGG+VD  INRG  PY+FR+ GQN+H+IGSLLPP GEQPRFTQLY+
Sbjct: 184 DCIRAYNSIFAFTSMGGEVDRKINRGRGPYIFRILGQNYHKIGSLLPPDGEQPRFTQLYV 243

Query: 169 YDTQNEVANRISSIANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPV 228
           +D  NEV NRISS+ NN    +LDP+I++GLS+M DEHNEL K FRMA+ERF  +++QPV
Sbjct: 244 HDPSNEVRNRISSLTNNA-PGDLDPQIVEGLSRMLDEHNELAKVFRMAKERFSGTDMQPV 303

Query: 229 RLRLIGTRAKDGRQFNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFM 288
           ++RLI TR+KDGRQ+NLP+S+E+AALIVG +D+E+G R VI+E + + L+RISE HPSFM
Sbjct: 304 QVRLIATRSKDGRQYNLPSSNELAALIVGNNDNERGPRDVIVEEKSHRLQRISENHPSFM 363

Query: 289 AMQYPLLFPYGEDGYRTDIPHADVDETTR-ARTIVTQREYYAFRFQQRRHESKTRFQLGR 348
           A+QYPLLFPYGEDGYR DIPH D   TTR  +T VT REYYAFRF +R +E++T    GR
Sbjct: 364 ALQYPLLFPYGEDGYRIDIPHNDSHVTTRKKKTTVTMREYYAFRFMERLNEARTLILCGR 423

Query: 349 LNQQFEVDAFTCVQESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSF 391
           L QQ  VDAFTC+Q+ RL+++R N++TIRK+V  GL D+VS GDTTPAS+G+R+VLPSSF
Sbjct: 424 LRQQLIVDAFTCLQQVRLDFIRNNQTTIRKDVLCGLTDSVSRGDTTPASIGRRVVLPSSF 483

BLAST of Spo05563.1 vs. NCBI nr
Match: gi|731345236|ref|XP_010683816.1| (PREDICTED: uncharacterized protein LOC104898428 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 391.3 bits (1004), Expect = 1.900e-105
Identity = 189/290 (65.17%), Postives = 238/290 (82.07%), Query Frame = 1

		  

Query: 102 MGGKVDSTINRGSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYIYDTQNEVANRISSI 161
           MGG+VD  INRG  PY+FR+ GQN+H+IGSLLPP GEQPRFTQLY++D  NEV NRISS+
Sbjct: 1   MGGEVDRKINRGRGPYIFRILGQNYHKIGSLLPPDGEQPRFTQLYVHDPSNEVRNRISSL 60

Query: 162 ANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVRLRLIGTRAKDGRQ 221
            NN    +LDP+I++GLS+M DEHNEL K FRMA+ERF  +++QPV++RLI TR+KDGRQ
Sbjct: 61  TNNA-PGDLDPQIVEGLSRMLDEHNELAKVFRMAKERFSGTDMQPVQVRLIATRSKDGRQ 120

Query: 222 FNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMAMQYPLLFPYGEDG 281
           +NLP+S+E+AALIVG +D+E+G R VI+E + + L+RISE HPSFMA+QYPLLFPYGEDG
Sbjct: 121 YNLPSSNELAALIVGNNDNERGPRDVIVEEKSHRLQRISENHPSFMALQYPLLFPYGEDG 180

Query: 282 YRTDIPHADVDETTR-ARTIVTQREYYAFRFQQRRHESKTRFQLGRLNQQFEVDAFTCVQ 341
           YR DIPH D   TTR  +T VT REYYAFRF +R +E++T    GRL QQ  VDAFTC+Q
Sbjct: 181 YRIDIPHNDSHVTTRKKKTTVTMREYYAFRFMERLNEARTLILCGRLRQQLIVDAFTCLQ 240

Query: 342 ESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTGSP 391
           + RL+++R N++TIRK+V  GL D+VS GDTTPAS+G+R+VLPSSFTG P
Sbjct: 241 QVRLDFIRNNQTTIRKDVLCGLTDSVSRGDTTPASIGRRVVLPSSFTGGP 289

BLAST of Spo05563.1 vs. NCBI nr
Match: gi|731365732|ref|XP_010694685.1| (PREDICTED: uncharacterized protein LOC104907451 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 379.4 bits (973), Expect = 7.500e-102
Identity = 184/290 (63.45%), Postives = 235/290 (81.03%), Query Frame = 1

		  

Query: 102 MGGKVDSTINRGSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYIYDTQNEVANRISSI 161
           MG +VD  INRG  PY+FR+ G N+H+IGSLLPP GEQPRFTQLY++D  NEV +RISS+
Sbjct: 1   MGREVDRKINRGRGPYIFRILGHNYHKIGSLLPPDGEQPRFTQLYVHDPSNEVRSRISSL 60

Query: 162 ANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVRLRLIGTRAKDGRQ 221
            NN    +LDP+I++GLS+M DEHNEL K FRMA ERF  +++QPV++RLI TR+KDGRQ
Sbjct: 61  TNND-PGDLDPQIVEGLSRMLDEHNELAKVFRMAMERFSGTDMQPVQVRLIATRSKDGRQ 120

Query: 222 FNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMAMQYPLLFPYGEDG 281
           +NLP+S+E+AALIVG +D+E+G + VI+E + + L+RISE HPSFMA+QYPLLFPYGEDG
Sbjct: 121 YNLPSSNELAALIVGNNDNERGPQDVIVEEKSHRLQRISENHPSFMALQYPLLFPYGEDG 180

Query: 282 YRTDIPHADVDETTR-ARTIVTQREYYAFRFQQRRHESKTRFQLGRLNQQFEVDAFTCVQ 341
           YR DIPH D   TTR  +T VT REYYAFRF +R +E++T    GRL QQ  V+AFTC+Q
Sbjct: 181 YRIDIPHNDSHVTTRKKKTTVTMREYYAFRFMERLNEARTLILCGRLRQQLIVNAFTCLQ 240

Query: 342 ESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTGSP 391
           + RL+++R N++TIRK+V  GL D+VS GDTTPAS+G+R+VLPSSFTG P
Sbjct: 241 QVRLDFIRNNQTTIRKDVLCGLTDSVSRGDTTPASIGRRVVLPSSFTGGP 289

BLAST of Spo05563.1 vs. NCBI nr
Match: gi|14140296|gb|AAK54302.1|AC034258_20 (putative helicase [Oryza sativa Japonica Group])

HSP 1 Score: 342.8 bits (878), Expect = 7.800e-91
Identity = 183/407 (44.96%), Postives = 247/407 (60.69%), Query Frame = 1

		  

Query: 19  QKSTIINHTKMTKTG-----NTLNHGTLVALNIHALTVGAIVWFEERVKNDSNKTIS--- 78
           +K TIIN  ++ K G        N G    +  H     A++W  E++++  +K  S   
Sbjct: 137 RKGTIINKNEIRKDGISSASKIWNFGGPTCMCPHC---HALMWHGEKIQSTRSKQPSFSR 196

Query: 79  ------KYGICCQKGKIVLPLLKDQARML---------------------NSIFAFTSMG 138
                  +G+CC++GK+ LP LK+    L                     NS+FAFTSMG
Sbjct: 197 QRKNQPSFGLCCKQGKVALPPLKEPPHFLSSLLARDGGTSENYQQNIRSYNSMFAFTSMG 256

Query: 139 GKVDSTINRGSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYIYDTQNEVANRISSIAN 198
           G VD  IN+G  PYVFRLNGQN+H IG+LLP    +PRF QLYIYDT+NE+ NRI +  +
Sbjct: 257 GAVDRKINKGRGPYVFRLNGQNYHHIGTLLPKGSNKPRFQQLYIYDTENEIKNRIEASRS 316

Query: 199 NGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVRLRLIGTRAKDGRQFN 258
               + LD K I GL  M DE+N L ++FRMARERF+E +     LRL+  R +DGRQ N
Sbjct: 317 GTRNASLDEKTIAGLLTMLDENNTLAQTFRMARERFKEDDYHNYTLRLLDNRDQDGRQNN 376

Query: 259 LPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMAMQYPLLFPYGEDGYR 318
           +P++SEVA LIV    ++   R +++E++    KRISE HP FMAMQYPLLFPYGEDGYR
Sbjct: 377 MPSTSEVAMLIVKDPTEKSYGRDIVLEYKDMRPKRISETHPKFMAMQYPLLFPYGEDGYR 436

Query: 319 TDIPHADVDETTRARTIVTQREYYAFRFQQRRHESKTRFQLGRLNQQFEVDAFTCVQESR 378
             I ++  D     +  VT REYYA+R QQR+ +S      G L+ QF VDA+TC+++ R
Sbjct: 437 LGIKYSGKDGVRYDKKCVTMREYYAYRLQQRQDQSMLPLACGNLSMQFMVDAYTCIEQCR 496

Query: 379 LEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTGSP 391
           L W+R N+  +R E++ GL DA+  GDT    +G+RIVLP+SFTG P
Sbjct: 497 LSWIRQNQGILRTELYGGLQDALRTGDTRTEKLGRRIVLPASFTGGP 540

BLAST of Spo05563.1 vs. NCBI nr
Match: gi|944233450|gb|KQK97812.1| (hypothetical protein SETIT_012162mg [Setaria italica])

HSP 1 Score: 340.9 bits (873), Expect = 3.000e-90
Identity = 174/358 (48.60%), Postives = 232/358 (64.80%), Query Frame = 1

		  

Query: 55  VWFEERVKNDSNKTISKYGICCQKGKIVLPLLK---------------------DQARML 114
           +W +ER K+D  K+   +G CC++GK+ LP LK                        R  
Sbjct: 1   MWHQERNKHDRKKSKPTFGFCCKQGKVKLPPLKKPPAYLEQLLRYGRGQSSNYRQNIRYY 60

Query: 115 NSIFAFTSMGGKVDSTINR-GSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYIYDTQN 174
           NS+FAFTSMGG ++  INR G  PYVFRLNGQN+H+IG+LLP  G  P+F QLYIYDT+N
Sbjct: 61  NSMFAFTSMGGHINPEINRQGGGPYVFRLNGQNYHQIGTLLPKEGTDPKFAQLYIYDTEN 120

Query: 175 EVANRISSIANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVRLRLI 234
           EV NRI +  + G   +LD  I+  L +M DE+N L K FRMAR+RF+E++ Q V++RL+
Sbjct: 121 EVKNRIRASTSKGKNQQLDENIVSELFEMLDENNSLVKIFRMARDRFRETDFQNVQIRLL 180

Query: 235 GTRAKDGRQFNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMAMQYP 294
           G R +DGRQ+N+PT+SE+AALI+G   DE   R +I++ +   L+RISELHPSFM+MQYP
Sbjct: 181 GERTRDGRQYNMPTASEIAALILGEQSDEPSERDIIVQDKDKHLQRISELHPSFMSMQYP 240

Query: 295 LLFPYGEDGYRTDIPHADVDETTRARTIVTQREYYAFRFQQRRHESKTRFQLGRLNQQFE 354
           LLFPYGEDG                   VT  EYYA+R QQR ++S      G+L  QF 
Sbjct: 241 LLFPYGEDG-----------------KCVTMMEYYAYRIQQRLNQSTVLLMSGKLFLQFL 300

Query: 355 VDAFTCVQESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTGSP 391
           VDA   +++ RL W RT++ T+R E++ GL DA+  GDTT   +G+RI+LPSS+TGSP
Sbjct: 301 VDAAASIEQWRLNWYRTHQGTLRTELYSGLQDAIDNGDTTTDQIGKRIILPSSYTGSP 341

BLAST of Spo05563.1 vs. UniProtKB/TrEMBL
Match: W4ZPV5_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.000e-93
Identity = 185/362 (51.10%), Postives = 244/362 (67.40%), Query Frame = 1

		  

Query: 53  AIVWFEERVKNDSNKTISKYGICCQKGKIVLPLLKD----------------------QA 112
           AI+W  ER  N  N T+ K+G+CC++GKI LP LK                         
Sbjct: 102 AIMWHGERSTNTCNITVPKFGLCCKEGKIKLPPLKQAPLYLRQLLRYNERGESSNFRQNI 161

Query: 113 RMLNSIFAFTSMGGKVDSTINRGS-SPYVFRLNGQNHHRIGSLLPPAGE-QPRFTQLYIY 172
           R+ NS+FAFTSMGGKVD  IN+ +  PYVFRLNGQN+H+IG+LLP     +P+F QLYI+
Sbjct: 162 RLYNSMFAFTSMGGKVDYEINKQTPGPYVFRLNGQNYHQIGTLLPKDDVMKPKFAQLYIH 221

Query: 173 DTQNEVANRISSIANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVR 232
           DT+NEV NRI++  +   +++ D  I++GL +M DEHN L KSFRMAR+RF+  E++ VR
Sbjct: 222 DTENEVRNRITASTSMESKTKPDENIVKGLLEMLDEHNVLVKSFRMARDRFENREIKDVR 281

Query: 233 LRLIGTRAKDGRQFNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMA 292
           LRLI  R+KDGRQ+NLP++SEVAALI+G  D E     +IIE +   L+RISELHPS+M+
Sbjct: 282 LRLINKRSKDGRQYNLPSASEVAALIIGEQDGENNEFDIIIETKDRMLQRISELHPSYMS 341

Query: 293 MQYPLLFPYGEDGYRTDIPHADVDETTRARTIVTQREYYAFRFQQRRHESKTRFQLGRLN 352
           MQYPLLFPYGEDG+R +I +         R  VT  E+YA+R QQR +++ T    GRL 
Sbjct: 342 MQYPLLFPYGEDGFRPEIEYQKKRGDKCKRKYVTILEFYAYRIQQRLNQATTLQMSGRLF 401

Query: 353 QQFEVDAFTCVQESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTG 391
            QF VDA TC+++ RL W RTN+  +R E++ GL DA+  GDT    VGQRI+LPS++ G
Sbjct: 402 LQFLVDAATCIEQWRLNWYRTNQGKLRTELYKGLHDAIENGDTRTEQVGQRIILPSTYNG 461

BLAST of Spo05563.1 vs. UniProtKB/TrEMBL
Match: A0A096UKM4_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.800e-92
Identity = 185/365 (50.68%), Postives = 247/365 (67.67%), Query Frame = 1

		  

Query: 53  AIVWFEERVKNDSNKTISKYGICCQKGKIVL-----------PLL-----------KDQA 112
           AI+W +ER KN++N +   +G+CC++GK+ L            LL           +D  
Sbjct: 101 AIMWHQERSKNNTNISRPTFGLCCKEGKVKLPPLKKPPAYLQQLLMSNEKGESSNYRDNI 160

Query: 113 RMLNSIFAFTSMGGKVDSTIN-RGSSPYVFRLNGQNHHRIGSLLPPA----GEQPRFTQL 172
           R  NSIFAFTSM G+VD  IN RG +PYVFRLNGQN+H+IG+LLP      G +P+F QL
Sbjct: 161 RNYNSIFAFTSMAGQVDYEINKRGGAPYVFRLNGQNYHQIGTLLPKDNGDNGCRPKFAQL 220

Query: 173 YIYDTQNEVANRISSIANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQ 232
           YIYDT+NEV NR+ +  +   +++LD  ++  L +M DE+NEL KSFRMAR+R+QES+L+
Sbjct: 221 YIYDTENEVKNRMHASTSKERKTQLDEGMVSRLLEMLDENNELVKSFRMARDRYQESDLE 280

Query: 233 PVRLRLIGTRAKDGRQFNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPS 292
            VRLRLIG R+ DGRQ+NLPT+SE+AALIVG    E   R +I+E++   L+RISELHPS
Sbjct: 281 NVRLRLIGKRSSDGRQYNLPTASEIAALIVGEQTGENVGRDIIVENKDKQLQRISELHPS 340

Query: 293 FMAMQYPLLFPYGEDGYRTDIPHADVDETTRARTIVTQREYYAFRFQQRRHESKTRFQLG 352
           FM+MQYPLLFPYGEDG+R +I           R  VT  +YYA+R QQR ++S      G
Sbjct: 341 FMSMQYPLLFPYGEDGFRPEIKLEKTKGGEGKRKHVTMMQYYAYRIQQRLNQSVILQTSG 400

Query: 353 RLNQQFEVDAFTCVQESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSS 391
           +L  QF VDA TC+++ RL W R ++ T+R E++ GL DA+  GDT    VG+RI+LPSS
Sbjct: 401 KLFLQFIVDAATCIEQWRLNWYRMHQGTLRTELYSGLQDAIDNGDTRTDQVGKRIILPSS 460

BLAST of Spo05563.1 vs. UniProtKB/TrEMBL
Match: Q94LS7_ORYSJ (AT hook motif-containing protein, putative OS=Oryza sativa subsp. japonica GN=LOC_Os10g32030 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 5.400e-91
Identity = 183/407 (44.96%), Postives = 247/407 (60.69%), Query Frame = 1

		  

Query: 19  QKSTIINHTKMTKTG-----NTLNHGTLVALNIHALTVGAIVWFEERVKNDSNKTIS--- 78
           +K TIIN  ++ K G        N G    +  H     A++W  E++++  +K  S   
Sbjct: 137 RKGTIINKNEIRKDGISSASKIWNFGGPTCMCPHC---HALMWHGEKIQSTRSKQPSFSR 196

Query: 79  ------KYGICCQKGKIVLPLLKDQARML---------------------NSIFAFTSMG 138
                  +G+CC++GK+ LP LK+    L                     NS+FAFTSMG
Sbjct: 197 QRKNQPSFGLCCKQGKVALPPLKEPPHFLSSLLARDGGTSENYQQNIRSYNSMFAFTSMG 256

Query: 139 GKVDSTINRGSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYIYDTQNEVANRISSIAN 198
           G VD  IN+G  PYVFRLNGQN+H IG+LLP    +PRF QLYIYDT+NE+ NRI +  +
Sbjct: 257 GAVDRKINKGRGPYVFRLNGQNYHHIGTLLPKGSNKPRFQQLYIYDTENEIKNRIEASRS 316

Query: 199 NGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVRLRLIGTRAKDGRQFN 258
               + LD K I GL  M DE+N L ++FRMARERF+E +     LRL+  R +DGRQ N
Sbjct: 317 GTRNASLDEKTIAGLLTMLDENNTLAQTFRMARERFKEDDYHNYTLRLLDNRDQDGRQNN 376

Query: 259 LPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMAMQYPLLFPYGEDGYR 318
           +P++SEVA LIV    ++   R +++E++    KRISE HP FMAMQYPLLFPYGEDGYR
Sbjct: 377 MPSTSEVAMLIVKDPTEKSYGRDIVLEYKDMRPKRISETHPKFMAMQYPLLFPYGEDGYR 436

Query: 319 TDIPHADVDETTRARTIVTQREYYAFRFQQRRHESKTRFQLGRLNQQFEVDAFTCVQESR 378
             I ++  D     +  VT REYYA+R QQR+ +S      G L+ QF VDA+TC+++ R
Sbjct: 437 LGIKYSGKDGVRYDKKCVTMREYYAYRLQQRQDQSMLPLACGNLSMQFMVDAYTCIEQCR 496

Query: 379 LEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTGSP 391
           L W+R N+  +R E++ GL DA+  GDT    +G+RIVLP+SFTG P
Sbjct: 497 LSWIRQNQGILRTELYGGLQDALRTGDTRTEKLGRRIVLPASFTGGP 540

BLAST of Spo05563.1 vs. UniProtKB/TrEMBL
Match: K3YD59_SETIT (Uncharacterized protein OS=Setaria italica GN=SETIT_012162mg PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 2.100e-90
Identity = 174/358 (48.60%), Postives = 232/358 (64.80%), Query Frame = 1

		  

Query: 55  VWFEERVKNDSNKTISKYGICCQKGKIVLPLLK---------------------DQARML 114
           +W +ER K+D  K+   +G CC++GK+ LP LK                        R  
Sbjct: 1   MWHQERNKHDRKKSKPTFGFCCKQGKVKLPPLKKPPAYLEQLLRYGRGQSSNYRQNIRYY 60

Query: 115 NSIFAFTSMGGKVDSTINR-GSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYIYDTQN 174
           NS+FAFTSMGG ++  INR G  PYVFRLNGQN+H+IG+LLP  G  P+F QLYIYDT+N
Sbjct: 61  NSMFAFTSMGGHINPEINRQGGGPYVFRLNGQNYHQIGTLLPKEGTDPKFAQLYIYDTEN 120

Query: 175 EVANRISSIANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVRLRLI 234
           EV NRI +  + G   +LD  I+  L +M DE+N L K FRMAR+RF+E++ Q V++RL+
Sbjct: 121 EVKNRIRASTSKGKNQQLDENIVSELFEMLDENNSLVKIFRMARDRFRETDFQNVQIRLL 180

Query: 235 GTRAKDGRQFNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMAMQYP 294
           G R +DGRQ+N+PT+SE+AALI+G   DE   R +I++ +   L+RISELHPSFM+MQYP
Sbjct: 181 GERTRDGRQYNMPTASEIAALILGEQSDEPSERDIIVQDKDKHLQRISELHPSFMSMQYP 240

Query: 295 LLFPYGEDGYRTDIPHADVDETTRARTIVTQREYYAFRFQQRRHESKTRFQLGRLNQQFE 354
           LLFPYGEDG                   VT  EYYA+R QQR ++S      G+L  QF 
Sbjct: 241 LLFPYGEDG-----------------KCVTMMEYYAYRIQQRLNQSTVLLMSGKLFLQFL 300

Query: 355 VDAFTCVQESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTGSP 391
           VDA   +++ RL W RT++ T+R E++ GL DA+  GDTT   +G+RI+LPSS+TGSP
Sbjct: 301 VDAAASIEQWRLNWYRTHQGTLRTELYSGLQDAIDNGDTTTDQIGKRIILPSSYTGSP 341

BLAST of Spo05563.1 vs. UniProtKB/TrEMBL
Match: Q2R1R7_ORYSJ (AT hook motif-containing protein, putative OS=Oryza sativa subsp. japonica GN=LOC_Os11g38300 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 4.600e-90
Identity = 172/361 (47.65%), Postives = 231/361 (63.99%), Query Frame = 1

		  

Query: 52  GAIVWFEERVKNDSNKTISKYGICCQKGKIVLPLLK----------------------DQ 111
           GA+ W+EER +    K    + +CC++GK+ LP LK                      D 
Sbjct: 296 GALFWYEERTRG-KGKGPPSFSLCCKQGKVDLPTLKKPPTYLSNLMCKEKGKRSRNYMDN 355

Query: 112 ARMLNSIFAFTSMGGKVDSTINRGSSPYVFRLNGQNHHRIGSLLPPAGEQPRFTQLYIYD 171
            R+ NS+FAFTSMGGKVD  IN GS PYVFR+NGQN+HRIG+LLP  G++PR+ QLYIYD
Sbjct: 356 IRVYNSMFAFTSMGGKVDREINNGSGPYVFRMNGQNYHRIGTLLPEEGDKPRWAQLYIYD 415

Query: 172 TQNEVANRISSIANNGGESELDPKIIQGLSKMFDEHNELTKSFRMARERFQESELQPVRL 231
           T+NEV NRI +  ++     +D  I+ GL  M D  N L ++FRMAR+RF+E +   V L
Sbjct: 416 TENEVKNRIDASTSSHNRESIDSHIVLGLKNMLDRENVLAQTFRMARDRFKEGDYHNVSL 475

Query: 232 RLIGTRAKDGRQFNLPTSSEVAALIVGTSDDEKGNRYVIIEHRMYGLKRISELHPSFMAM 291
           RLI  R  DGRQ N+P++SEVAALIV  + + +  R +I+ ++  G +RISE HP FMAM
Sbjct: 476 RLIRKRGGDGRQHNMPSASEVAALIVNDTSENQKGRDIIVHYKDTGPRRISENHPKFMAM 535

Query: 292 QYPLLFPYGEDGYRTDIPHADVDETTRARTIVTQREYYAFRFQQRRHESKTRFQLGRLNQ 351
           QYPLLFPYGEDG+   I + D   +   R  +T  EYYA+R QQR+++        +L  
Sbjct: 536 QYPLLFPYGEDGFTNKILYRDNHGSKCKRKHLTMLEYYAYRIQQRKNQCMHLLMCEKLTL 595

Query: 352 QFEVDAFTCVQESRLEWVRTNKSTIRKEVFWGLADAVSWGDTTPASVGQRIVLPSSFTGS 391
           QF VDA  C+ + RL+W+R ++  +R E++ GL DA+  GDT    VG+RI+LPSSFTGS
Sbjct: 596 QFIVDALACIIQYRLDWIRKHQGNLRTELYAGLQDAIERGDTRAEQVGKRILLPSSFTGS 655

The following BLAST results are available for this feature:
BLAST of Spo05563.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|731322483|ref|XP_010671914.1|6.5e-12261.5PREDICTED: uncharacterized pro... [more]
gi|731345236|ref|XP_010683816.1|1.9e-10565.1PREDICTED: uncharacterized pro... [more]
gi|731365732|ref|XP_010694685.1|7.5e-10263.4PREDICTED: uncharacterized pro... [more]
gi|14140296|gb|AAK54302.1|AC034258_207.8e-9144.9putative helicase [Oryza sativ... [more]
gi|944233450|gb|KQK97812.1|3.0e-9048.6hypothetical protein SETIT_012... [more]
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BLAST of Spo05563.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
W4ZPV5_WHEAT2.0e-9351.1Uncharacterized protein OS=Tri... [more]
A0A096UKM4_WHEAT3.8e-9250.6Uncharacterized protein OS=Tri... [more]
Q94LS7_ORYSJ5.4e-9144.9AT hook motif-containing prote... [more]
K3YD59_SETIT2.1e-9048.6Uncharacterized protein OS=Set... [more]
Q2R1R7_ORYSJ4.6e-9047.6AT hook motif-containing prote... [more]
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BLAST of Spo05563.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo05563.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025476Helitron helicase-like domainPFAMPF14214Helitron_like_Ncoord: 306..390
score: 1.2
NoneNo IPR availablePANTHERPTHR10492UNCHARACTERIZEDcoord: 262..390
score: 1.7

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009536 plastid