Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTGCCCAAGCTTCTGCAGCAGCTCAAGCAGGAGCATCTGTCATTCAGATTTTTGTTGGTCGGATAAGGGTAATTTTCAACTAGAAGGAGACATTGAGACGGTTGCAATTATGTGCATTTCTATATTTGTTAAATTATTTCTCATTCTTCAGGATTGGGCACGTAATCATTCTGGTGACTCTGAGATTGAGACTGCTCTTAAAAGAGGGGAAGATCCTGGGTTAGCATTGGTGAGTTTTGGTTCGACTTCCTAAATTCATCTCGTTCAGTCTACTAAGGATTACAATGTTTAATGATTTCACACTGTCTAGCTCAAGTTTGAAAGGAGACTTTTTCACTTGAATGAAAAAGATAAAACCCTTAGAGATGTGTGAATGAGTTGGGGGCCTGTGGGGCTTACTTGACTGCAATCTCATTATATGCAACATTTACAGGTGACAAAAGCATACAATTATATTCATAAATATGGTCACAAATCAAAGCTGATGGCTGCAGCAGTTCGCAACAAGCAGGACCTCTATAGTCTTCTTGGGTAATACAGTCTATAGTCTATACCTTAGTCTCCTTCCAAGTTAAACCTGTTGAGTGCTGCAATAGTTCTGAAGTACTACCAGTTTTTACTCTGTTTCTTATCCATGTCCGTTAGGGTTGATTACATTATAGCACCTCTTAAGGTACTGGAGTCTCTAAAAGACTCCGTAACCACTCCTGATGAGAAGTATGCTTTCACGAGGAGGCTGTCCCCACAATCTGCTGCTACCTATGAGTTCAGCAAAGAAGAG TTTGCCCAAGCTTCTGCAGCAGCTCAAGCAGGAGCATCTGTCATTCAGATTTTTGTTGGTCGGATAAGGGATTGGGCACGTAATCATTCTGGTGACTCTGAGATTGAGACTGCTCTTAAAAGAGGGGAAGATCCTGGGTTAGCATTGGTGACAAAAGCATACAATTATATTCATAAATATGGTCACAAATCAAAGCTGATGGCTGCAGCAGTTCGCAACAAGCAGGACCTCTATAGTCTTCTTGGGGTTGATTACATTATAGCACCTCTTAAGGTACTGGAGTCTCTAAAAGACTCCGTAACCACTCCTGATGAGAAGTATGCTTTCACGAGGAGGCTGTCCCCACAATCTGCTGCTACCTATGAGTTCAGCAAAGAAGAG TTTGCCCAAGCTTCTGCAGCAGCTCAAGCAGGAGCATCTGTCATTCAGATTTTTGTTGGTCGGATAAGGGATTGGGCACGTAATCATTCTGGTGACTCTGAGATTGAGACTGCTCTTAAAAGAGGGGAAGATCCTGGGTTAGCATTGGTGACAAAAGCATACAATTATATTCATAAATATGGTCACAAATCAAAGCTGATGGCTGCAGCAGTTCGCAACAAGCAGGACCTCTATAGTCTTCTTGGGGTTGATTACATTATAGCACCTCTTAAGGTACTGGAGTCTCTAAAAGACTCCGTAACCACTCCTGATGAGAAGTATGCTTTCACGAGGAGGCTGTCCCCACAATCTGCTGCTACCTATGAGTTCAGCAAAGAAGAG FAQASAAAQAGASVIQIFVGRIRDWARNHSGDSEIETALKRGEDPGLALVTKAYNYIHKYGHKSKLMAAAVRNKQDLYSLLGVDYIIAPLKVLESLKDSVTTPDEKYAFTRRLSPQSAATYEFSKEE Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo05596.1 vs. NCBI nr
Match: gi|902211252|gb|KNA16665.1| (hypothetical protein SOVF_087030 [Spinacia oleracea]) HSP 1 Score: 247.7 bits (631), Expect = 1.100e-62 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Spo05596.1 vs. NCBI nr
Match: gi|731330517|ref|XP_010676173.1| (PREDICTED: probable transaldolase [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 229.2 bits (583), Expect = 4.100e-57 Identity = 114/127 (89.76%), Postives = 124/127 (97.64%), Query Frame = 1
BLAST of Spo05596.1 vs. NCBI nr
Match: gi|802741664|ref|XP_012087136.1| (PREDICTED: probable transaldolase [Jatropha curcas]) HSP 1 Score: 226.1 bits (575), Expect = 3.500e-56 Identity = 113/127 (88.98%), Postives = 121/127 (95.28%), Query Frame = 1
BLAST of Spo05596.1 vs. NCBI nr
Match: gi|595846967|ref|XP_007209231.1| (hypothetical protein PRUPE_ppa006960mg [Prunus persica]) HSP 1 Score: 226.1 bits (575), Expect = 3.500e-56 Identity = 112/127 (88.19%), Postives = 123/127 (96.85%), Query Frame = 1
BLAST of Spo05596.1 vs. NCBI nr
Match: gi|702325194|ref|XP_010053436.1| (PREDICTED: probable transaldolase [Eucalyptus grandis]) HSP 1 Score: 226.1 bits (575), Expect = 3.500e-56 Identity = 112/127 (88.19%), Postives = 122/127 (96.06%), Query Frame = 1
BLAST of Spo05596.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RB09_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_087030 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 7.700e-63 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Spo05596.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CKD8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g097920 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.900e-57 Identity = 114/127 (89.76%), Postives = 124/127 (97.64%), Query Frame = 1
BLAST of Spo05596.1 vs. UniProtKB/TrEMBL
Match: M5WUH0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006960mg PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.400e-56 Identity = 112/127 (88.19%), Postives = 123/127 (96.85%), Query Frame = 1
BLAST of Spo05596.1 vs. UniProtKB/TrEMBL
Match: A0A059CGZ1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02030 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.400e-56 Identity = 112/127 (88.19%), Postives = 122/127 (96.06%), Query Frame = 1
BLAST of Spo05596.1 vs. UniProtKB/TrEMBL
Match: A0A067JNS2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20787 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.400e-56 Identity = 113/127 (88.98%), Postives = 121/127 (95.28%), Query Frame = 1
BLAST of Spo05596.1 vs. ExPASy Swiss-Prot
Match: TALDO_BOVIN (Transaldolase OS=Bos taurus GN=TALDO1 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.600e-13 Identity = 47/105 (44.76%), Postives = 65/105 (61.90%), Query Frame = 1
BLAST of Spo05596.1 vs. ExPASy Swiss-Prot
Match: TAL_PSEA6 (Transaldolase OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=tal PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.200e-13 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 1
BLAST of Spo05596.1 vs. ExPASy Swiss-Prot
Match: TALDO_RAT (Transaldolase OS=Rattus norvegicus GN=Taldo1 PE=1 SV=2) HSP 1 Score: 74.7 bits (182), Expect = 8.100e-13 Identity = 52/126 (41.27%), Postives = 77/126 (61.11%), Query Frame = 1
BLAST of Spo05596.1 vs. ExPASy Swiss-Prot
Match: TAL_EDWI9 (Transaldolase OS=Edwardsiella ictaluri (strain 93-146) GN=tal PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 8.100e-13 Identity = 42/108 (38.89%), Postives = 62/108 (57.41%), Query Frame = 1
BLAST of Spo05596.1 vs. ExPASy Swiss-Prot
Match: TALDO_MOUSE (Transaldolase OS=Mus musculus GN=Taldo1 PE=1 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 1.100e-12 Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = 1
BLAST of Spo05596.1 vs. TAIR (Arabidopsis)
Match: AT1G12230.2 (Aldolase superfamily protein) HSP 1 Score: 199.1 bits (505), Expect = 1.600e-51 Identity = 98/128 (76.56%), Postives = 117/128 (91.41%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05596.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05596.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05596.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo05596.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|