Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTAACCATCCCTTCTAGTTCATCTAGAGAGAAAGACGTACTACGTACTGTACGTAGGCGGCATTATTTAGCTTAGACACCGCGAATTTCCAAATAGAAAACAGGGGTACGCCGTGAATTAGCTAGCTAGTCGCAAATGGAGGCAACGGATGAAGGGAGTAATGGCAAGGACTGCATCCAAAGCAAGGAAAATTATGCAGAACAACATAAATTATCACTCATGAGCTCTTTTGTTGAATGTCGTGATCCTTCTTCTAAGGTTTTTTCTTTTCCAATTCTTTTTTTCTGCGTAATTAACATTTTTTTTTTTTAACATGCTATGCAACTATATGGAAAAATGTAAAAAATAAAATAAAAGTGGCTATTTATAATTAACCTTACATTTGTTACATAACAGGAACATTTAACAGTATAGCCTGTTCACTAAAGAGTACCTAGTATGTACTACTTTACTACTTTCGAGCAAACACTATGAAAATGTTCGACTTTTACTTATTCTTGTATGAATAAGTATTTGTTTATGAAACTTTTGGAGAGATCCAATGAGAAGTCGCTTCAAATGAGAAGATCAAATTAAACATTTAGTACCCATAATGGAAATATTTCATCATATGCAGTATAATTGATACGTACTACATGATTTCTAACATAGTAACATAGTACGTAACATTTGTGGTATAACGGAAGCAAGAAAGATAATTAAAAGCGCAAATAAAGACACTGATTTTTAACGTGGTTCACTAATAATGTCTTAGTTACATCAACATGCAGAGACAATGAAAATTTTATTGATCTTGAGGAGTAAAAATTACAGATTATCATATAGCTAGGTTATATAGTACTCTTTAGACCAATTTGAAAAAAGCCCATAAAATAGACTCAAACAGATAACTCTTGTCCTAAATAACAGATACCCGTGTTCGATTCAACACATATTTTAACAATTAATGTGTAATGTAATATAAACGATATGTTTTCTTTCACACTCTATAAAGAAATTTCTAAAACATACACCTGCAGGGTGTTGATGAATTGACACTAAGAAGATTCTTAAGAGCTCGTGATCTGGATGTGGAGAAGGCGGGGGCTATGATCTTGAAGTATCTAAAATGGAGGAGGACATTCATACCTAAAGGATATGTGTTAGACACAGAGATAAAGAATGAAGTTGCACAAAACAAAGCTTTTGTAGGAGGTAATGATAAGAAAGGACGCCCTATACTGGTTGTACAGGCTCGTCGACACTTTCAAAACACCACACCAGGTGGTTCTGATGAGTTCAAGCGTATGTTATCTCATCCTATTTTTGACTGCTAGCTAGATATACAGTAGATAGAGCTCTCTTGTTCTTCACAGCTGCAGCCTGCAGGAAATTCTGACAGCTTATCTGGTATTGTTGTTTTTACAGGATTTGCTGTGTATGCTCTTGACAAGATGTGTACAAGGTTACCCTACAAAATTCATTGCATTTTGAATTTTGATGGAGTGTGACAAGTTTTGATGTTGATGGCCTAACTATAATGTATTTATTGATGTAAATATTGAATCAGGATGCCCCTTGGACAGGAAAAGTTTTGTGCTATTGGGGATCTTCAAGGATGGGGATACTCTAACAGCGACATTCGTGGATATCTTGGGGCTCTTTCTATTCTGCAGGTAAACCAGTTTAAATTCTGCATTGGAATGGCTAGCTACTAATACTGATCCACTACCGAATGTATTACTACCTACCAATTTGGTTGTGGACTTGTGGGAGGTAAAACCAAATACGTATAAGTCAGCGATCAGATAAGAAAAATCAGACAAAAAAAAGTAAAAAGTTAAAAACATTCGGACCAGACTAGACCAGAAATTAGAAAAATCAGACCAGGCCAGGCGAAGAGAACATACTCGTAAGAGGAAAAAATATATGGCCCATTTTTTTTTTTTTTATAGGAAAAGTACACAAAAGTTTGATAGTATTTTGGCAACACTTTAGCCTAACTTATCTAAAGAAATAAAATAAAGAAAATTTACATTCAAGATCTTGGGGTGTCAGAATATGCTGACCAACAAAGACAACATAATCTGCTGCGCGGCCGGTTAGCTTTTGGATATTTGTGACGAAAAGAAACTTCATCAAATTGATTCAACAGATGCTTGACATGATCCATTAGCAATTGAATCTTCCAAAGGACATTGGTCTTTTATACTGGTCGACTTTTGTTACGTATGCTTTCACTAGCTATTTTTCTGATTAATCATCATACTTCATACACTAGAAAAACATTTCCTGGAGTACGTAGTAAATTACGGAGTATAAAACAAGAAAATTTTATCTATGCTGTGATTCTTGTTGATTTATGACAAATTTATTTGCAGGACTGCTACCCAGAAAGACTAGGCAAGATGTACATACTCCATGCACCAAGAATCTTTATGGCAGTGTGGAGGATTATCTACCCCTTCATTGACGACAACACCAAGATGAAAGTGAGCTAAAACACTTTGTAAACTTGATAAAATTAAATCACTTTGTCTGAAACCATGCATCATCCATATTCCGCTCTTTTGTACAGATAGTATTTGTGGATAAACGGCAGCTAACTTCAACCTTGCTCGAAGATATCGATGAAAGCCAACTTCCTGATGTATATGGAGGAAAACTGCAACTGAAGCCTATTCAGGATGCCTGACAATACCAAACAATTTCAGGAACCAGGACCTTCTACAGAATTCAGTCATTTATTCCACCACTGATAACTCTGTTCAGGAGTACATTGTTAGGAAATTATGCAACTTTCCTAATGAATTAGATTAGTAGAAATAATAATAATATTTAAAATAACACACACAAACAAATTGATTATCCGACAAGTGTTATAATCTCTAAATACCGTGCAAAACTTTTACTGAAAAAGATAAATAATACACAAGTGTTCACAACACTTATTGTAACTCACAACCTATATGTACCCCAATTATACCCAAGAATTTTTCTCTAAAAATTCTTTTAAAGATTTTTTCTCTCTCTCCTTTATATTTCTTTTTGTTTTTGGGATGATATAATATATGATTTCAAACTTCATATATATAGTTTTCAG AATTAACCATCCCTTCTAGTTCATCTAGAGAGAAAGACGTACTACGTACTGTACGTAGGCGGCATTATTTAGCTTAGACACCGCGAATTTCCAAATAGAAAACAGGGGTACGCCGTGAATTAGCTAGCTAGTCGCAAATGGAGGCAACGGATGAAGGGAGTAATGGCAAGGACTGCATCCAAAGCAAGGAAAATTATGCAGAACAACATAAATTATCACTCATGAGCTCTTTTGTTGAATGTCGTGATCCTTCTTCTAAGGGTGTTGATGAATTGACACTAAGAAGATTCTTAAGAGCTCGTGATCTGGATGTGGAGAAGGCGGGGGCTATGATCTTGAAGTATCTAAAATGGAGGAGGACATTCATACCTAAAGGATATGTGTTAGACACAGAGATAAAGAATGAAGTTGCACAAAACAAAGCTTTTGTAGGAGGTAATGATAAGAAAGGACGCCCTATACTGGTTGTACAGGCTCGTCGACACTTTCAAAACACCACACCAGGTGGTTCTGATGAGTTCAAGCGATTTGCTGTGTATGCTCTTGACAAGATGTGTACAAGGATGCCCCTTGGACAGGAAAAGTTTTGTGCTATTGGGGATCTTCAAGGATGGGGATACTCTAACAGCGACATTCGTGGATATCTTGGGGCTCTTTCTATTCTGCAGGACTGCTACCCAGAAAGACTAGGCAAGATGTACATACTCCATGCACCAAGAATCTTTATGGCAGTGTGGAGGATTATCTACCCCTTCATTGACGACAACACCAAGATGAAAATAGTATTTGTGGATAAACGGCAGCTAACTTCAACCTTGCTCGAAGATATCGATGAAAGCCAACTTCCTGATGTATATGGAGGAAAACTGCAACTGAAGCCTATTCAGGATGCCTGACAATACCAAACAATTTCAGGAACCAGGACCTTCTACAGAATTCAGTCATTTATTCCACCACTGATAACTCTGTTCAGGAGTACATTGTTAGGAAATTATGCAACTTTCCTAATGAATTAGATTAGTAGAAATAATAATAATATTTAAAATAACACACACAAACAAATTGATTATCCGACAAGTGTTATAATCTCTAAATACCGTGCAAAACTTTTACTGAAAAAGATAAATAATACACAAGTGTTCACAACACTTATTGTAACTCACAACCTATATGTACCCCAATTATACCCAAGAATTTTTCTCTAAAAATTCTTTTAAAGATTTTTTCTCTCTCTCCTTTATATTTCTTTTTGTTTTTGGGATGATATAATATATGATTTCAAACTTCATATATATAGTTTTCAG ATGGAGGCAACGGATGAAGGGAGTAATGGCAAGGACTGCATCCAAAGCAAGGAAAATTATGCAGAACAACATAAATTATCACTCATGAGCTCTTTTGTTGAATGTCGTGATCCTTCTTCTAAGGGTGTTGATGAATTGACACTAAGAAGATTCTTAAGAGCTCGTGATCTGGATGTGGAGAAGGCGGGGGCTATGATCTTGAAGTATCTAAAATGGAGGAGGACATTCATACCTAAAGGATATGTGTTAGACACAGAGATAAAGAATGAAGTTGCACAAAACAAAGCTTTTGTAGGAGGTAATGATAAGAAAGGACGCCCTATACTGGTTGTACAGGCTCGTCGACACTTTCAAAACACCACACCAGGTGGTTCTGATGAGTTCAAGCGATTTGCTGTGTATGCTCTTGACAAGATGTGTACAAGGATGCCCCTTGGACAGGAAAAGTTTTGTGCTATTGGGGATCTTCAAGGATGGGGATACTCTAACAGCGACATTCGTGGATATCTTGGGGCTCTTTCTATTCTGCAGGACTGCTACCCAGAAAGACTAGGCAAGATGTACATACTCCATGCACCAAGAATCTTTATGGCAGTGTGGAGGATTATCTACCCCTTCATTGACGACAACACCAAGATGAAAATAGTATTTGTGGATAAACGGCAGCTAACTTCAACCTTGCTCGAAGATATCGATGAAAGCCAACTTCCTGATGTATATGGAGGAAAACTGCAACTGAAGCCTATTCAGGATGCCTGA MEATDEGSNGKDCIQSKENYAEQHKLSLMSSFVECRDPSSKGVDELTLRRFLRARDLDVEKAGAMILKYLKWRRTFIPKGYVLDTEIKNEVAQNKAFVGGNDKKGRPILVVQARRHFQNTTPGGSDEFKRFAVYALDKMCTRMPLGQEKFCAIGDLQGWGYSNSDIRGYLGALSILQDCYPERLGKMYILHAPRIFMAVWRIIYPFIDDNTKMKIVFVDKRQLTSTLLEDIDESQLPDVYGGKLQLKPIQDA Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo05654.1 vs. NCBI nr
Match: gi|902229664|gb|KNA21566.1| (hypothetical protein SOVF_041920 [Spinacia oleracea]) HSP 1 Score: 519.6 bits (1337), Expect = 3.000e-144 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo05654.1 vs. NCBI nr
Match: gi|731374624|ref|XP_010667018.1| (PREDICTED: random slug protein 5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 403.7 bits (1036), Expect = 2.400e-109 Identity = 196/253 (77.47%), Postives = 224/253 (88.54%), Query Frame = 1
BLAST of Spo05654.1 vs. NCBI nr
Match: gi|902229668|gb|KNA21570.1| (hypothetical protein SOVF_041950 [Spinacia oleracea]) HSP 1 Score: 375.2 bits (962), Expect = 9.200e-101 Identity = 177/251 (70.52%), Postives = 207/251 (82.47%), Query Frame = 1
BLAST of Spo05654.1 vs. NCBI nr
Match: gi|731374610|ref|XP_010667013.1| (PREDICTED: random slug protein 5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 372.1 bits (954), Expect = 7.800e-100 Identity = 175/252 (69.44%), Postives = 212/252 (84.13%), Query Frame = 1
BLAST of Spo05654.1 vs. NCBI nr
Match: gi|731374614|ref|XP_010667014.1| (PREDICTED: random slug protein 5-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 369.4 bits (947), Expect = 5.000e-99 Identity = 173/247 (70.04%), Postives = 210/247 (85.02%), Query Frame = 1
BLAST of Spo05654.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPW2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041920 PE=4 SV=1) HSP 1 Score: 519.6 bits (1337), Expect = 2.100e-144 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo05654.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B3V3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006110 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 1.700e-109 Identity = 196/253 (77.47%), Postives = 224/253 (88.54%), Query Frame = 1
BLAST of Spo05654.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RPW6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_041950 PE=4 SV=1) HSP 1 Score: 375.2 bits (962), Expect = 6.400e-101 Identity = 177/251 (70.52%), Postives = 207/251 (82.47%), Query Frame = 1
BLAST of Spo05654.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B6V1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006080 PE=4 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 5.400e-100 Identity = 175/252 (69.44%), Postives = 212/252 (84.13%), Query Frame = 1
BLAST of Spo05654.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7A7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_006070 PE=4 SV=1) HSP 1 Score: 369.4 bits (947), Expect = 3.500e-99 Identity = 173/247 (70.04%), Postives = 210/247 (85.02%), Query Frame = 1
BLAST of Spo05654.1 vs. ExPASy Swiss-Prot
Match: RSC5_DICDI (Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.800e-25 Identity = 75/225 (33.33%), Postives = 115/225 (51.11%), Query Frame = 1
BLAST of Spo05654.1 vs. ExPASy Swiss-Prot
Match: SEC14_SCHPO (Sec14 cytosolic factor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec14 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.500e-18 Identity = 72/221 (32.58%), Postives = 109/221 (49.32%), Query Frame = 1
BLAST of Spo05654.1 vs. ExPASy Swiss-Prot
Match: RETM_AEDAE (Protein real-time OS=Aedes aegypti GN=retm PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.600e-18 Identity = 67/239 (28.03%), Postives = 108/239 (45.19%), Query Frame = 1
BLAST of Spo05654.1 vs. ExPASy Swiss-Prot
Match: S14L1_HUMAN (SEC14-like protein 1 OS=Homo sapiens GN=SEC14L1 PE=1 SV=2) HSP 1 Score: 93.2 bits (230), Expect = 4.400e-18 Identity = 65/214 (30.37%), Postives = 108/214 (50.47%), Query Frame = 1
BLAST of Spo05654.1 vs. ExPASy Swiss-Prot
Match: S14L1_MOUSE (SEC14-like protein 1 OS=Mus musculus GN=Sec14l1 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 9.700e-18 Identity = 65/214 (30.37%), Postives = 107/214 (50.00%), Query Frame = 1
BLAST of Spo05654.1 vs. TAIR (Arabidopsis)
Match: AT1G01630.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 317.4 bits (812), Expect = 8.000e-87 Identity = 147/234 (62.82%), Postives = 181/234 (77.35%), Query Frame = 1
BLAST of Spo05654.1 vs. TAIR (Arabidopsis)
Match: AT1G14820.3 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 157.5 bits (397), Expect = 1.100e-38 Identity = 86/236 (36.44%), Postives = 128/236 (54.24%), Query Frame = 1
BLAST of Spo05654.1 vs. TAIR (Arabidopsis)
Match: AT1G75170.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 108.6 bits (270), Expect = 5.600e-24 Identity = 73/238 (30.67%), Postives = 120/238 (50.42%), Query Frame = 1
BLAST of Spo05654.1 vs. TAIR (Arabidopsis)
Match: AT4G36640.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 107.8 bits (268), Expect = 9.600e-24 Identity = 75/221 (33.94%), Postives = 113/221 (51.13%), Query Frame = 1
BLAST of Spo05654.1 vs. TAIR (Arabidopsis)
Match: AT1G22180.2 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 97.8 bits (242), Expect = 1.000e-20 Identity = 72/246 (29.27%), Postives = 123/246 (50.00%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05654.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05654.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05654.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo05654.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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