Spo05777.1 (mRNA) | SpinachBase

Overview


Name	Spo05777.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Late embryogenesis abundant protein
Location	SpoScf_01833 : 85777 .. 87021 (+)
Sequence length	1143

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGGATTTAAAACGACCCTAAACGACCCTTAGAAGCCGTCAAGCCGAGGAAGAAACCTCCTGACTCCTGAGAGGCGCCTAATATTGACGCGGTCCTTTACTAACCCTACTGGGACGCCTTTGTTTCTCACCACTTGCTTTTTATTTTTTACAGCTGCATTTCTCAGCATCCTCTATATATACCCCCTTCACTCCCTCATCAAACCCCATCTCAACATTCAACACTCTCCCTCTTCATCAAAGCATACAAACAGAGCAACCAACAAAGAGGCAAAGCTTTTCCGACTTTTTCTCACCGCCGCCGTCGTCGTTAGAGGTTTTTGTGGACTAGAACTTCCTTCTACGGCGGCTTTTTTTTTACAAATAATAACAAAACTAATAATATCGATCAATGGCTCGCTCTCTTTCTAACGCTAAGGTCTTCTTCAACCTTGTTGCTGAAAATGTCTCCATTGCTTCTCAAAGGTAAGCTAAACTCGTCGTTTTTGTTACCCTTTTGATACAGGGAGGGGTATTCTTGTCTTTTACATTTTTATTAATGTAAAATTAAACTTGTTGATTGAACAGGCGAGGATACGCTGCAGCGTCACAAGGGGTTGCAGGGATAGGTGGAAGCGAGAAGAAATTGACCAAAGAAGAGATCGGACGGTCAGCAGAGAAGTCGTGGATCCCGGATCCAGTAACTGGATACTACAGGCCGGCTAATCGTGCGGTTGAGATTGATGTTGCTGAGCTCCGTGAAATATTCCTCAAGCAGAAGATTACATCTCACTAGATTTAATTATTTACGACTAAACAAATTAAAGGAAAAAAAAGAAATGATCAATGATGCCGGTTACGGTTTAGTATGTGACCGTCGGGTGAGATTATCAGATTGCGAACCAAAAAAAAGGAGAAGAATTGTGAGCTTTCGTTGTTTGTAATTCATGACTATTATGTCCTCTGTTCTTTTGAGAGTTTGAGTCACAATCAAGTTGTGACTTCTCATTTCAAAAATTATTATATATTAATGACAATACGAGTGTGTTTAATTACATCTTGCAATTACAATTTAGACAATTTTTTTTTTATTAATGTTGCAATTGTAGTAAAATCGAGGAGGTACATTACCACTCTGTATAAACTTTATGAATGTACAAATGTACAATATTTCTCGTAGACGTGTGCTTAATGAACATTGTACACGAACATAACTTACGGGCTTTAAATTTAAAAACATGAAATAGCATTACTTAAAGTGTAAAA

mRNA sequence

CACGGATTTAAAACGACCCTAAACGACCCTTAGAAGCCGTCAAGCCGAGGAAGAAACCTCCTGACTCCTGAGAGGCGCCTAATATTGACGCGGTCCTTTACTAACCCTACTGGGACGCCTTTGTTTCTCACCACTTGCTTTTTATTTTTTACAGCTGCATTTCTCAGCATCCTCTATATATACCCCCTTCACTCCCTCATCAAACCCCATCTCAACATTCAACACTCTCCCTCTTCATCAAAGCATACAAACAGAGCAACCAACAAAGAGGCAAAGCTTTTCCGACTTTTTCTCACCGCCGCCGTCGTCGTTAGAGGTTTTTGTGGACTAGAACTTCCTTCTACGGCGGCTTTTTTTTTACAAATAATAACAAAACTAATAATATCGATCAATGGCTCGCTCTCTTTCTAACGCTAAGGTCTTCTTCAACCTTGTTGCTGAAAATGTCTCCATTGCTTCTCAAAGGCGAGGATACGCTGCAGCGTCACAAGGGGTTGCAGGGATAGGTGGAAGCGAGAAGAAATTGACCAAAGAAGAGATCGGACGGTCAGCAGAGAAGTCGTGGATCCCGGATCCAGTAACTGGATACTACAGGCCGGCTAATCGTGCGGTTGAGATTGATGTTGCTGAGCTCCGTGAAATATTCCTCAAGCAGAAGATTACATCTCACTAGATTTAATTATTTACGACTAAACAAATTAAAGGAAAAAAAAGAAATGATCAATGATGCCGGTTACGGTTTAGTATGTGACCGTCGGGTGAGATTATCAGATTGCGAACCAAAAAAAAGGAGAAGAATTGTGAGCTTTCGTTGTTTGTAATTCATGACTATTATGTCCTCTGTTCTTTTGAGAGTTTGAGTCACAATCAAGTTGTGACTTCTCATTTCAAAAATTATTATATATTAATGACAATACGAGTGTGTTTAATTACATCTTGCAATTACAATTTAGACAATTTTTTTTTTATTAATGTTGCAATTGTAGTAAAATCGAGGAGGTACATTACCACTCTGTATAAACTTTATGAATGTACAAATGTACAATATTTCTCGTAGACGTGTGCTTAATGAACATTGTACACGAACATAACTTACGGGCTTTAAATTTAAAAACATGAAATAGCATTACTTAAAGTGTAAAA

Coding sequence (CDS)

ATGGCTCGCTCTCTTTCTAACGCTAAGGTCTTCTTCAACCTTGTTGCTGAAAATGTCTCCATTGCTTCTCAAAGGCGAGGATACGCTGCAGCGTCACAAGGGGTTGCAGGGATAGGTGGAAGCGAGAAGAAATTGACCAAAGAAGAGATCGGACGGTCAGCAGAGAAGTCGTGGATCCCGGATCCAGTAACTGGATACTACAGGCCGGCTAATCGTGCGGTTGAGATTGATGTTGCTGAGCTCCGTGAAATATTCCTCAAGCAGAAGATTACATCTCACTAG

Protein sequence

MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITSH

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo05777	Spo05777	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo05777.1	Spo05777.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05777.1.exon.1	Spo05777.1.exon.1	exon
Spo05777.1.exon.2	Spo05777.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05777.1.utr5p.1	Spo05777.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05777.1.CDS.1	Spo05777.1.CDS.1	CDS
Spo05777.1.CDS.2	Spo05777.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05777.1.utr3p.1	Spo05777.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo05777.1 vs. NCBI nr
Match: gi|902204229|gb|KNA14821.1| (hypothetical protein SOVF_103990 [Spinacia oleracea])

HSP 1 Score: 180.6 bits (457), Expect = 1.200e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60
          MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP
Sbjct: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60

Query: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
          DPVTGYYRPANRAVEIDVAELREIFLKQKITSH
Sbjct: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITSH 93

[Close]

BLAST of Spo05777.1 vs. NCBI nr
Match: gi|731346245|ref|XP_010684355.1| (PREDICTED: late embryogenesis abundant protein Lea5 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 140.6 bits (353), Expect = 1.400e-30
Identity = 71/92 (77.17%), Postives = 79/92 (85.87%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60
          MARSLSNAKVFF+LV +N+S+ASQRRGYAAASQGVA +G    K  +EE GRSAE SW+P
Sbjct: 1  MARSLSNAKVFFSLVVDNISMASQRRGYAAASQGVAAVGRGSGKSGQEERGRSAENSWVP 60

Query: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
          DPVTGYYRPANRA EIDVAELRE+ LKQKI S
Sbjct: 61 DPVTGYYRPANRAAEIDVAELREMLLKQKIRS 92

[Close]

BLAST of Spo05777.1 vs. NCBI nr
Match: gi|310780836|gb|ADP23916.1| (late embryogenesis abundant protein [Sesuvium portulacastrum])

HSP 1 Score: 126.7 bits (317), Expect = 2.100e-26
Identity = 68/94 (72.34%), Postives = 74/94 (78.72%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEK----KLTKEEIGRSAEK 60
          MARSLSNAKVF +LV++N+SI   RRGYAAASQGVAG  G       K  KEE+GR  E 
Sbjct: 1  MARSLSNAKVFVSLVSDNLSIVLNRRGYAAASQGVAGTVGRGTGRIGKAGKEEVGRGGEN 60

Query: 61 SWIPDPVTGYYRPANRAVEIDVAELREIFLKQKI 91
          SW+PDPVTGYYRPANR  EIDVAELREIFLKQKI
Sbjct: 61 SWVPDPVTGYYRPANRPDEIDVAELREIFLKQKI 94

[Close]

BLAST of Spo05777.1 vs. NCBI nr
Match: gi|374719871|gb|AEZ67462.1| (late embryogenesis abundant proteins, partial [Haloxylon ammodendron])

HSP 1 Score: 104.8 bits (260), Expect = 8.500e-20
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVA----GIGGSEKKLTKEEIGRSAEK 60
          MARS+SNAKV  +LVA+N+SIASQRRGYAAASQ VA         +K  TKEEIGRSAE+
Sbjct: 1  MARSISNAKVILSLVADNISIASQRRGYAAASQRVAVEVARAASGKKTTTKEEIGRSAEQ 60

Query: 61 SWIPDPVTGYYRPANRA 74
          SW+PDPVTGYYRPAN A
Sbjct: 61 SWVPDPVTGYYRPANHA 77

[Close]

BLAST of Spo05777.1 vs. NCBI nr
Match: gi|363497938|gb|AEW24432.1| (late embryogenesis abundant protein 3L-1 [Camellia sinensis])

HSP 1 Score: 97.8 bits (242), Expect = 1.000e-17
Identity = 56/98 (57.14%), Postives = 65/98 (66.33%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAG-----IGGSEKKLTKEEIGRSAE 60
          MARS SNAK+    V + +S+A  RRGYAAASQGVA       GG   K   EE   + +
Sbjct: 1  MARSFSNAKLLSAFVVDRISLAVTRRGYAAASQGVASGPVTARGGVMGKKDGEE--EATK 60

Query: 61 KSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
           SW+PDPVTGYYRP N+A EIDVAELRE+ LK KI  H
Sbjct: 61 TSWVPDPVTGYYRPENKANEIDVAELREMLLKNKIRRH 96

[Close]

BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5N8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_103990 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 8.500e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60
          MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP
Sbjct: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60

Query: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
          DPVTGYYRPANRAVEIDVAELREIFLKQKITSH
Sbjct: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITSH 93

[Close]

BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXX1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g163660 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 9.800e-31
Identity = 71/92 (77.17%), Postives = 79/92 (85.87%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKSWIP 60
          MARSLSNAKVFF+LV +N+S+ASQRRGYAAASQGVA +G    K  +EE GRSAE SW+P
Sbjct: 1  MARSLSNAKVFFSLVVDNISMASQRRGYAAASQGVAAVGRGSGKSGQEERGRSAENSWVP 60

Query: 61 DPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
          DPVTGYYRPANRA EIDVAELRE+ LKQKI S
Sbjct: 61 DPVTGYYRPANRAAEIDVAELREMLLKQKIRS 92

[Close]

BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: E3W6T3_SESPO (Late embryogenesis abundant protein OS=Sesuvium portulacastrum GN=Lea5 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.500e-26
Identity = 68/94 (72.34%), Postives = 74/94 (78.72%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEK----KLTKEEIGRSAEK 60
          MARSLSNAKVF +LV++N+SI   RRGYAAASQGVAG  G       K  KEE+GR  E 
Sbjct: 1  MARSLSNAKVFVSLVSDNLSIVLNRRGYAAASQGVAGTVGRGTGRIGKAGKEEVGRGGEN 60

Query: 61 SWIPDPVTGYYRPANRAVEIDVAELREIFLKQKI 91
          SW+PDPVTGYYRPANR  EIDVAELREIFLKQKI
Sbjct: 61 SWVPDPVTGYYRPANRPDEIDVAELREIFLKQKI 94

[Close]

BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: H6WP43_9CARY (Late embryogenesis abundant proteins (Fragment) OS=Haloxylon ammodendron GN=LEA3 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.900e-20
Identity = 55/77 (71.43%), Postives = 62/77 (80.52%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVA----GIGGSEKKLTKEEIGRSAEK 60
          MARS+SNAKV  +LVA+N+SIASQRRGYAAASQ VA         +K  TKEEIGRSAE+
Sbjct: 1  MARSISNAKVILSLVADNISIASQRRGYAAASQRVAVEVARAASGKKTTTKEEIGRSAEQ 60

Query: 61 SWIPDPVTGYYRPANRA 74
          SW+PDPVTGYYRPAN A
Sbjct: 61 SWVPDPVTGYYRPANHA 77

[Close]

BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Match: G9HVM5_CAMSI (Late embryogenesis abundant protein 3L-1 OS=Camellia sinensis GN=LEA3L-1 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 7.300e-18
Identity = 56/98 (57.14%), Postives = 65/98 (66.33%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAG-----IGGSEKKLTKEEIGRSAE 60
          MARS SNAK+    V + +S+A  RRGYAAASQGVA       GG   K   EE   + +
Sbjct: 1  MARSFSNAKLLSAFVVDRISLAVTRRGYAAASQGVASGPVTARGGVMGKKDGEE--EATK 60

Query: 61 KSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
           SW+PDPVTGYYRP N+A EIDVAELRE+ LK KI  H
Sbjct: 61 TSWVPDPVTGYYRPENKANEIDVAELREMLLKNKIRRH 96

[Close]

BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.300e-15
Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQ--GVAGIGGSEKK----LTKEEIGRSA 60
          MARSL  AK+    VA+ +S++  RRGYAAA+    ++  G  EK       +E+ G S+
Sbjct: 1  MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASS 60

Query: 61 EKSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITSH 94
            +W PDP+TGYYRP NRAVEID AELRE+ L  K+ +H
Sbjct: 61 --AWAPDPITGYYRPENRAVEIDPAELREMLLNHKVRAH 97

[Close]

BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: ARG2_VIGRR (Indole-3-acetic acid-induced protein ARG2 OS=Vigna radiata var. radiata GN=ARG2 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.200e-12
Identity = 47/97 (48.45%), Postives = 59/97 (60.82%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAAS-------QGVAGIGGSEKKLTKEEIGRS 60
          MARS +N KV   LVA+  S  + R G+AAA+       +G A IGG+    + EE  R 
Sbjct: 1  MARSFTNVKVLSALVADGFSNTTTRHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRG 60

Query: 61 AEK-SWIPDPVTGYYRPANRAVEIDVAELREIFLKQK 90
           EK SW+PDPVTGYYRP N   EIDVA++R   L +K
Sbjct: 61 GEKVSWVPDPVTGYYRPEN-TNEIDVADMRATVLGKK 96

[Close]

BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: SAG21_ARATH (Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial OS=Arabidopsis thaliana GN=SAG21 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.100e-11
Identity = 44/96 (45.83%), Postives = 56/96 (58.33%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAA-ASQGVAGIGG-----SEKKLTKEEIGRSA 60
          MARS+SN K+    V+  +S A  RRGYAA A+QG    GG     +   + K+ +  S 
Sbjct: 1  MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEEST 60

Query: 61 EK-SWIPDPVTGYYRPANRAVEIDVAELREIFLKQK 90
          +K SW+PDP TGYYRP   + EID AELR   L  K
Sbjct: 61 QKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: LEA5D_GOSHI (Late embryogenesis abundant protein Lea5-D OS=Gossypium hirsutum GN=LEA5-D PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.800e-9
Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = 1


		  
Query: 1   MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVA----GIGGSEKKLTKEEIGRSAEK 60
           MARS+S+ K+    + + + ++  RRGY+ A         G  G+  K+ + +  + +  
Sbjct: 1   MARSVSSFKLLGASIFDGLYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRDAMKESSS 60

Query: 61  S--------WIPDPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
           S        W PDPVTGYYRP N   EID AELRE+ L  ++ S
Sbjct: 61  SETRAYSSAWAPDPVTGYYRPENCGAEIDAAELREMLLNHRVRS 104

[Close]

BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Match: LEA5A_GOSHI (Late embryogenesis abundant protein Lea5-A OS=Gossypium hirsutum GN=LEA5-A PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.000e-9
Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 1


		  
Query: 1   MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVA--------GIGGSEKKLTKEEIG- 60
           MARS+S+ K     V + + ++  RRGY+ A              +G  E++   +E   
Sbjct: 1   MARSVSSFKFLGASVFDALYVSISRRGYSGAPPAAVTASFGRPGAMGKVERRYAMKESSS 60

Query: 61  ---RSAEKSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
              R+   +W PDPVTGYYRP N   EID A+LRE+ L  ++ S
Sbjct: 61  SETRAYSSAWAPDPVTGYYRPENCGAEIDAADLREMMLNHRVRS 104

[Close]

BLAST of Spo05777.1 vs. TAIR (Arabidopsis)
Match: AT4G15910.1 (drought-induced 21)

HSP 1 Score: 72.0 bits (175), Expect = 2.200e-13
Identity = 47/101 (46.53%), Postives = 59/101 (58.42%), Query Frame = 1


		  
Query: 2   ARSLSNA-KVFFNLVAENVSIASQ-RRGYAAASQGVAGIGGSEKKLTKEEIGR------- 61
           ARSLS A K   +  + ++S +   RR Y A SQ V   G S+   T+  +G+       
Sbjct: 3   ARSLSGAVKSLCSAASGSLSCSIVLRRSYVATSQNVTAAGLSKGGSTRVMVGKMEQRGLD 62

Query: 62  -SAEKSWIPDPVTGYYRPANRAVEIDVAELREIFLKQKITS 93
             AE +W PDPVTGYYRP+NRA EID AELRE+ LK K  S
Sbjct: 63  QEAESAWGPDPVTGYYRPSNRAAEIDPAELRELLLKNKAKS 103

[Close]

BLAST of Spo05777.1 vs. TAIR (Arabidopsis)
Match: AT4G02380.1 (senescence-associated gene 21)

HSP 1 Score: 70.5 bits (171), Expect = 6.300e-13
Identity = 44/96 (45.83%), Postives = 56/96 (58.33%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAA-ASQGVAGIGG-----SEKKLTKEEIGRSA 60
          MARS+SN K+    V+  +S A  RRGYAA A+QG    GG     +   + K+ +  S 
Sbjct: 1  MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEEST 60

Query: 61 EK-SWIPDPVTGYYRPANRAVEIDVAELREIFLKQK 90
          +K SW+PDP TGYYRP   + EID AELR   L  K
Sbjct: 61 QKISWVPDPKTGYYRPETGSNEIDAAELRAALLNNK 96

[Close]

BLAST of Spo05777.1 vs. TAIR (Arabidopsis)
Match: AT1G02820.1 (Late embryogenesis abundant 3 (LEA3) family protein)

HSP 1 Score: 68.2 bits (165), Expect = 3.100e-12
Identity = 42/90 (46.67%), Postives = 55/90 (61.11%), Query Frame = 1


		  
Query: 1  MARSLSNAKVFFNLVAENVSIASQRRGYAAASQGVAGIGGSEKKLTKEEIGRSAEKS-WI 60
          MARSL+NAK+     +E +S A  RRG+AAA++       S  ++ K     S+EK+ W+
Sbjct: 1  MARSLANAKIQSVFGSEKLSNAVFRRGFAAAAKTALDGSVSTAEMKKRAGEASSEKAPWV 60

Query: 61 PDPVTGYYRPANRAVEIDVAELREIFLKQK 90
          PDP TGYYRP   + EID AELR I L  K
Sbjct: 61 PDPKTGYYRPETVSEEIDPAELRAILLNNK 90

The following BLAST results are available for this feature:

BLAST of Spo05777.1 vs. NCBI nr
BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
BLAST of Spo05777.1 vs. TAIR (Arabidopsis)

BLAST of Spo05777.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902204229\|gb\|KNA14821.1\|	1.2e-42	100.	hypothetical protein SOVF_1039...	[more]
gi\|731346245\|ref\|XP_010684355.1\|	1.4e-30	77.1	PREDICTED: late embryogenesis ...	[more]
gi\|310780836\|gb\|ADP23916.1\|	2.1e-26	72.3	late embryogenesis abundant pr...	[more]
gi\|374719871\|gb\|AEZ67462.1\|	8.5e-20	71.4	late embryogenesis abundant pr...	[more]
gi\|363497938\|gb\|AEW24432.1\|	1.0e-17	57.1	late embryogenesis abundant pr...	[more]

BLAST of Spo05777.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R5N8_SPIOL	8.5e-43	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BXX1_BETVU	9.8e-31	77.1	Uncharacterized protein OS=Bet...	[more]
E3W6T3_SESPO	1.5e-26	72.3	Late embryogenesis abundant pr...	[more]
H6WP43_9CARY	5.9e-20	71.4	Late embryogenesis abundant pr...	[more]
G9HVM5_CAMSI	7.3e-18	57.1	Late embryogenesis abundant pr...	[more]

BLAST of Spo05777.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
LEA5_CITSI	1.3e-15	48.4	Late embryogenesis abundant pr...	[more]
ARG2_VIGRR	2.2e-12	48.4	Indole-3-acetic acid-induced p...	[more]
SAG21_ARATH	1.1e-11	45.8	Protein SENESCENCE-ASSOCIATED ...	[more]
LEA5D_GOSHI	1.8e-9	35.5	Late embryogenesis abundant pr...	[more]
LEA5A_GOSHI	4.0e-9	35.5	Late embryogenesis abundant pr...	[more]

BLAST of Spo05777.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT4G15910.1	2.2e-13	46.5	drought-induced 21	[more]
AT4G02380.1	6.3e-13	45.8	senescence-associated gene 21	[more]
AT1G02820.1	3.1e-12	46.6	Late embryogenesis abundant 3 ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004926	Late embryogenesis abundant protein, LEA5-type	PFAM	PF03242	LEA_3	coord: 1..86 score: 9.9
None	No IPR available	PANTHER	PTHR33509	FAMILY NOT NAMED	coord: 1..93 score: 1.8
None	No IPR available	PANTHER	PTHR33509:SF5	LATE EMBRYOGENESIS ABUNDANT 3 (LEA3) FAMILY PROTEIN	coord: 1..93 score: 1.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress