Spo05862.1 (mRNA) | SpinachBase

Overview


Name	Spo05862.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Pentatricopeptide repeat-containing protein, putative
Location	chr1 : 49342105 .. 49342935 (-)
Sequence length	831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAAGCACCACTCCTCCGTCGCCTTCTCTCCTCTTTTTCCACCTTCAAATTTCCATTACCACCCACTCCAAACCTAATCACACGGCGGTTCTCTTCCTCCGAACCAAACCCCACTTCCCCCGAACCCAAACCCAAACCCAACACCAAGGTCAGCTTCTCCCCACCAAACTCCTCTGTCTCCAAACCCGAATCCGAACCTACCCAAAACAAGAACACCGACCTCCCACCCTCTTACAACCCCTTTACCAACAAACCCGTCAATGCCGAACCCAAAGATCCCAACAATTTAAAAGAAATCTTCCACAAAATGAGAACTGATGGGTTAATCAGCAATGCAGTCAAGATGTTCGACGAAATGTCAAAACATGGTTTAACCCATGACACGTTTGAAATGTTTAAGGTGATCAAACAAACAGGTAAAATGCCCGATGTGGTGGCCCACACCGCTGTTATTGAAGCTTACGCTGGTGCTGGACAATGCAAGGGAGCTCACAATGTGTACTTGAAGATGTTGGCATATGGGGTTCTTCCCAATGCTTACACTTATAGTGTGTTGATCAAGTCGCTAGCTGCAGGTGGGATGATCATGGAGGCTAAAGAGTATGTGTTGGAGATGTTGGGGAAGGGAATGAGGCTGAATCCCGGGACGTGTGTGGCGGTTATCGAGGCGTTTGTGAGGGAGGGGAAGGAGGAGGAGGGAAGAGAGTTGTTGAATGAGATGAAAGGGAAGGGTTTTGTGGGGGATGAGAAGGGTGTTAGGGAGGTTCTTAAGGGTAAGAAAGGGCATGTTGTTAGGAATGTTATAGATATTCTTTGTGCTAAATGA

mRNA sequence

ATGGCGGAAGCACCACTCCTCCGTCGCCTTCTCTCCTCTTTTTCCACCTTCAAATTTCCATTACCACCCACTCCAAACCTAATCACACGGCGGTTCTCTTCCTCCGAACCAAACCCCACTTCCCCCGAACCCAAACCCAAACCCAACACCAAGGTCAGCTTCTCCCCACCAAACTCCTCTGTCTCCAAACCCGAATCCGAACCTACCCAAAACAAGAACACCGACCTCCCACCCTCTTACAACCCCTTTACCAACAAACCCGTCAATGCCGAACCCAAAGATCCCAACAATTTAAAAGAAATCTTCCACAAAATGAGAACTGATGGGTTAATCAGCAATGCAGTCAAGATGTTCGACGAAATGTCAAAACATGGTTTAACCCATGACACGTTTGAAATGTTTAAGGTGATCAAACAAACAGGTAAAATGCCCGATGTGGTGGCCCACACCGCTGTTATTGAAGCTTACGCTGGTGCTGGACAATGCAAGGGAGCTCACAATGTGTACTTGAAGATGTTGGCATATGGGGTTCTTCCCAATGCTTACACTTATAGTGTGTTGATCAAGTCGCTAGCTGCAGGTGGGATGATCATGGAGGCTAAAGAGTATGTGTTGGAGATGTTGGGGAAGGGAATGAGGCTGAATCCCGGGACGTGTGTGGCGGTTATCGAGGCGTTTGTGAGGGAGGGGAAGGAGGAGGAGGGAAGAGAGTTGTTGAATGAGATGAAAGGGAAGGGTTTTGTGGGGGATGAGAAGGGTGTTAGGGAGGTTCTTAAGGGTAAGAAAGGGCATGTTGTTAGGAATGTTATAGATATTCTTTGTGCTAAATGA

Coding sequence (CDS)

ATGGCGGAAGCACCACTCCTCCGTCGCCTTCTCTCCTCTTTTTCCACCTTCAAATTTCCATTACCACCCACTCCAAACCTAATCACACGGCGGTTCTCTTCCTCCGAACCAAACCCCACTTCCCCCGAACCCAAACCCAAACCCAACACCAAGGTCAGCTTCTCCCCACCAAACTCCTCTGTCTCCAAACCCGAATCCGAACCTACCCAAAACAAGAACACCGACCTCCCACCCTCTTACAACCCCTTTACCAACAAACCCGTCAATGCCGAACCCAAAGATCCCAACAATTTAAAAGAAATCTTCCACAAAATGAGAACTGATGGGTTAATCAGCAATGCAGTCAAGATGTTCGACGAAATGTCAAAACATGGTTTAACCCATGACACGTTTGAAATGTTTAAGGTGATCAAACAAACAGGTAAAATGCCCGATGTGGTGGCCCACACCGCTGTTATTGAAGCTTACGCTGGTGCTGGACAATGCAAGGGAGCTCACAATGTGTACTTGAAGATGTTGGCATATGGGGTTCTTCCCAATGCTTACACTTATAGTGTGTTGATCAAGTCGCTAGCTGCAGGTGGGATGATCATGGAGGCTAAAGAGTATGTGTTGGAGATGTTGGGGAAGGGAATGAGGCTGAATCCCGGGACGTGTGTGGCGGTTATCGAGGCGTTTGTGAGGGAGGGGAAGGAGGAGGAGGGAAGAGAGTTGTTGAATGAGATGAAAGGGAAGGGTTTTGTGGGGGATGAGAAGGGTGTTAGGGAGGTTCTTAAGGGTAAGAAAGGGCATGTTGTTAGGAATGTTATAGATATTCTTTGTGCTAAATGA

Protein sequence

MAEAPLLRRLLSSFSTFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSSVSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLNEMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo05862	Spo05862	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo05862.1	Spo05862.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05862.1.CDS.1	Spo05862.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05862.1.exon.1	Spo05862.1.exon.1	exon

Homology

[Close]

BLAST of Spo05862.1 vs. NCBI nr
Match: gi|902239233|gb|KNA25515.1| (hypothetical protein SOVF_006060 [Spinacia oleracea])

HSP 1 Score: 537.7 bits (1384), Expect = 1.200e-149
Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 1

		  
Query: 1   MAEAPLLRRLLSSFSTFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSS 60
           MAEAPLLRRLLSSF TFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSS
Sbjct: 1   MAEAPLLRRLLSSFFTFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSS 60

Query: 61  VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDE 120
           VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDE
Sbjct: 61  VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDE 120

Query: 121 MSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPN 180
           MSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPN
Sbjct: 121 MSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPN 180

Query: 181 AYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLN 240
           AYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLN
Sbjct: 181 AYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLN 240

Query: 241 EMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
           EMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK
Sbjct: 241 EMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 276

[Close]

BLAST of Spo05862.1 vs. NCBI nr
Match: gi|731343429|ref|XP_010682888.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 339.3 bits (869), Expect = 6.100e-90
Identity = 183/271 (67.53%), Postives = 214/271 (78.97%), Query Frame = 1

		  
Query: 9   RLLSSFSTFKFPLPP--TPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSSV-SKPE 68
           ++LS  + F   + P   PNLITR F+SSEP PTSP    KPNTKV+F+PPNS   S+PE
Sbjct: 33  QILSQPTKFTSIISPFSIPNLITRPFTSSEPKPTSP----KPNTKVNFTPPNSDPESEPE 92

Query: 69  SEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDEMSKHG 128
           SEPTQN+  +LPP Y+PF+  P+  EP+D  NL+E+FHKMRT+GL++NAVKMFDEMSK G
Sbjct: 93  SEPTQNETINLPPPYDPFSKTPMLEEPQDSKNLQEVFHKMRTEGLMNNAVKMFDEMSKDG 152

Query: 129 LTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPNAYTYS 188
           LTH+  EMF+ IK  GKMPDVVAHTAVIEAYA AG+CK AH VYL+ML  GVLPNAYTYS
Sbjct: 153 LTHEALEMFREIKDKGKMPDVVAHTAVIEAYANAGECKEAHKVYLRMLLSGVLPNAYTYS 212

Query: 189 VLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLNEMKGK 248
           VLIKSLAAGGM+ + K YVLEMLGKGMR N  TCVAV EAF+RE KEEEGRE   +MK +
Sbjct: 213 VLIKSLAAGGMLGDVKSYVLEMLGKGMRPNASTCVAVFEAFMRERKEEEGREFFKDMKER 272

Query: 249 GFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
           GFVGDEKGV EVLKGK+G + R V+DI  AK
Sbjct: 273 GFVGDEKGVTEVLKGKRGPLFRYVMDIFLAK 299

[Close]

BLAST of Spo05862.1 vs. NCBI nr
Match: gi|657957641|ref|XP_008370323.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g38150-like [Malus domestica])

HSP 1 Score: 257.3 bits (656), Expect = 3.100e-65
Identity = 142/240 (59.17%), Postives = 174/240 (72.50%), Query Frame = 1

		  
Query: 43  EPKPKPNTKVSFSPPNSSVSKPESEPTQNKN----TDLPPSYNPFTNKPVNAEPKDPNNL 102
           EP  K NTKV+FS P+      ++ PT +      + LPP Y+PF+ KP   +P+DP +L
Sbjct: 92  EPSTKINTKVNFSLPSDDEDDDQTTPTASAKEIDKSKLPPPYDPFSKKPAIEDPEDPKDL 151

Query: 103 KEIFHKMRTDGLISNAVKMFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAG 162
           +E+FHKMR+DGL +NAVKMFD +SK GLTH+  E+F  IK  G MPDVV+HTAVIEAYA 
Sbjct: 152 QEVFHKMRSDGLTNNAVKMFDALSKDGLTHEALELFAQIKDKGHMPDVVSHTAVIEAYAN 211

Query: 163 AGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAA--GGMIMEAKEYVLEMLGKGMRLNP 222
           AG+ K A  VYL+MLA GV PN YTYSVLIK+LAA  G  + +AK+Y+L+M+GKGMR N 
Sbjct: 212 AGKTKEALKVYLRMLASGVXPNTYTYSVLIKALAADPGNFLGDAKKYLLDMMGKGMRPNA 271

Query: 223 GTCVAVIEAFVREGKEEEGRELLNEMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
            T +AV E F R+ K EEGR LL EMKGKGFV DEK VREVLK K+G VVR VI+IL  K
Sbjct: 272 XTYMAVFEGFARQEKAEEGRLLLEEMKGKGFVPDEKAVREVLKSKRGPVVRTVINILFGK 331

[Close]

BLAST of Spo05862.1 vs. NCBI nr
Match: gi|147828501|emb|CAN77580.1| (hypothetical protein VITISV_015346 [Vitis vinifera])

HSP 1 Score: 255.4 bits (651), Expect = 1.200e-64
Identity = 136/236 (57.63%), Postives = 170/236 (72.03%), Query Frame = 1

		  
Query: 47  KPNTKVSFSPPNSS------VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKE 106
           + +TK++FSP +S       + K + E  ++K   LPP Y+PF+ KP   EPKDP +L++
Sbjct: 115 RSSTKINFSPSDSDSDSETMIKKTKHEIDKSK---LPPPYDPFSKKPAIEEPKDPKDLQD 174

Query: 107 IFHKMRTDGLISNAVKMFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAG 166
           IFHKMRT+GL+ NAVKMFD +SK GLTH+  E+F  IK  G MPDVVAHTAVIEAYA AG
Sbjct: 175 IFHKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANAG 234

Query: 167 QCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCV 226
           Q K A  VY++ML  GV+PNAYTYSVLIK LA    + EAK+YVLEM+GKGMR N GT  
Sbjct: 235 QSKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMRPNAGTYT 294

Query: 227 AVIEAFVREGKEEEGRELLNEMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
           A+ E F +E K EEGRE L +MK KGF  DEK VRE+LK ++G V R+++DIL  K
Sbjct: 295 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 347

[Close]

BLAST of Spo05862.1 vs. NCBI nr
Match: gi|976927442|gb|KVI11159.1| (Pentatricopeptide repeat-containing protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 253.8 bits (647), Expect = 3.400e-64
Identity = 147/280 (52.50%), Postives = 188/280 (67.14%), Query Frame = 1

		  
Query: 1   MAEAPLLRRLLSSFSTFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSS 60
           MA++ +L   L+      FP P   +L +R  +++             NTKV+FSP +S 
Sbjct: 1   MAQSSILLFNLNRLFRRHFPTPLNQSLFSRFVTTNR------------NTKVNFSPSDSE 60

Query: 61  VSKPESEPTQNKNTD----LPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVK 120
            S   S  T  K  D    LPP Y+PF   PV  EP DP NL+E+FHK+RT GL +NAVK
Sbjct: 61  -SDDNSPTTAVKEVDDKSKLPPPYDPFKKTPVIHEPDDPTNLQEVFHKIRTQGLNNNAVK 120

Query: 121 MFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYG 180
           MFD +SK GLTH+  ++F  IK  G+MPDVVAHTAVIEAYA AG+ K A  VY++MLA G
Sbjct: 121 MFDALSKDGLTHEALDLFSQIKDKGEMPDVVAHTAVIEAYAAAGKAKEALKVYMRMLASG 180

Query: 181 VLPNAYTYSVLIKSLAAGG---MIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEE 240
           VLPNAYTY+VLIKSLA  G   ++ E+K+Y +EM+GKG+R NPGTCVAV E  V+ GKEE
Sbjct: 181 VLPNAYTYTVLIKSLAESGDEKLLAESKKYFMEMMGKGIRPNPGTCVAVFEGIVKGGKEE 240

Query: 241 EGRELLNEMKGKGFVGDEKGVREVLKGKKGHVVRNVIDIL 274
           EGR+L+ +MK  GF  D KG+RE+L  K+G V R+VI+IL
Sbjct: 241 EGRQLVMKMKALGFAPDHKGLRELLNNKRGQVFRSVINIL 267

[Close]

BLAST of Spo05862.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S189_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006060 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 8.100e-150
Identity = 275/276 (99.64%), Postives = 275/276 (99.64%), Query Frame = 1

		  
Query: 1   MAEAPLLRRLLSSFSTFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSS 60
           MAEAPLLRRLLSSF TFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSS
Sbjct: 1   MAEAPLLRRLLSSFFTFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSS 60

Query: 61  VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDE 120
           VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDE
Sbjct: 61  VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDE 120

Query: 121 MSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPN 180
           MSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPN
Sbjct: 121 MSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPN 180

Query: 181 AYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLN 240
           AYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLN
Sbjct: 181 AYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLN 240

Query: 241 EMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
           EMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK
Sbjct: 241 EMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 276

[Close]

BLAST of Spo05862.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C268_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g151680 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.300e-90
Identity = 183/271 (67.53%), Postives = 214/271 (78.97%), Query Frame = 1

		  
Query: 9   RLLSSFSTFKFPLPP--TPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSSV-SKPE 68
           ++LS  + F   + P   PNLITR F+SSEP PTSP    KPNTKV+F+PPNS   S+PE
Sbjct: 33  QILSQPTKFTSIISPFSIPNLITRPFTSSEPKPTSP----KPNTKVNFTPPNSDPESEPE 92

Query: 69  SEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVKMFDEMSKHG 128
           SEPTQN+  +LPP Y+PF+  P+  EP+D  NL+E+FHKMRT+GL++NAVKMFDEMSK G
Sbjct: 93  SEPTQNETINLPPPYDPFSKTPMLEEPQDSKNLQEVFHKMRTEGLMNNAVKMFDEMSKDG 152

Query: 129 LTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPNAYTYS 188
           LTH+  EMF+ IK  GKMPDVVAHTAVIEAYA AG+CK AH VYL+ML  GVLPNAYTYS
Sbjct: 153 LTHEALEMFREIKDKGKMPDVVAHTAVIEAYANAGECKEAHKVYLRMLLSGVLPNAYTYS 212

Query: 189 VLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLNEMKGK 248
           VLIKSLAAGGM+ + K YVLEMLGKGMR N  TCVAV EAF+RE KEEEGRE   +MK +
Sbjct: 213 VLIKSLAAGGMLGDVKSYVLEMLGKGMRPNASTCVAVFEAFMRERKEEEGREFFKDMKER 272

Query: 249 GFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
           GFVGDEKGV EVLKGK+G + R V+DI  AK
Sbjct: 273 GFVGDEKGVTEVLKGKRGPLFRYVMDIFLAK 299

[Close]

BLAST of Spo05862.1 vs. UniProtKB/TrEMBL
Match: A5C4I9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015346 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 8.100e-65
Identity = 136/236 (57.63%), Postives = 170/236 (72.03%), Query Frame = 1

		  
Query: 47  KPNTKVSFSPPNSS------VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKE 106
           + +TK++FSP +S       + K + E  ++K   LPP Y+PF+ KP   EPKDP +L++
Sbjct: 115 RSSTKINFSPSDSDSDSETMIKKTKHEIDKSK---LPPPYDPFSKKPAIEEPKDPKDLQD 174

Query: 107 IFHKMRTDGLISNAVKMFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAG 166
           IFHKMRT+GL+ NAVKMFD +SK GLTH+  E+F  IK  G MPDVVAHTAVIEAYA AG
Sbjct: 175 IFHKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANAG 234

Query: 167 QCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCV 226
           Q K A  VY++ML  GV+PNAYTYSVLIK LA    + EAK+YVLEM+GKGMR N GT  
Sbjct: 235 QSKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMRPNAGTYT 294

Query: 227 AVIEAFVREGKEEEGRELLNEMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
           A+ E F +E K EEGRE L +MK KGF  DEK VRE+LK ++G V R+++DIL  K
Sbjct: 295 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 347

[Close]

BLAST of Spo05862.1 vs. UniProtKB/TrEMBL
Match: A0A103YL97_CYNCS (Pentatricopeptide repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_010431 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 2.300e-64
Identity = 147/280 (52.50%), Postives = 188/280 (67.14%), Query Frame = 1

		  
Query: 1   MAEAPLLRRLLSSFSTFKFPLPPTPNLITRRFSSSEPNPTSPEPKPKPNTKVSFSPPNSS 60
           MA++ +L   L+      FP P   +L +R  +++             NTKV+FSP +S 
Sbjct: 1   MAQSSILLFNLNRLFRRHFPTPLNQSLFSRFVTTNR------------NTKVNFSPSDSE 60

Query: 61  VSKPESEPTQNKNTD----LPPSYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVK 120
            S   S  T  K  D    LPP Y+PF   PV  EP DP NL+E+FHK+RT GL +NAVK
Sbjct: 61  -SDDNSPTTAVKEVDDKSKLPPPYDPFKKTPVIHEPDDPTNLQEVFHKIRTQGLNNNAVK 120

Query: 121 MFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYG 180
           MFD +SK GLTH+  ++F  IK  G+MPDVVAHTAVIEAYA AG+ K A  VY++MLA G
Sbjct: 121 MFDALSKDGLTHEALDLFSQIKDKGEMPDVVAHTAVIEAYAAAGKAKEALKVYMRMLASG 180

Query: 181 VLPNAYTYSVLIKSLAAGG---MIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEE 240
           VLPNAYTY+VLIKSLA  G   ++ E+K+Y +EM+GKG+R NPGTCVAV E  V+ GKEE
Sbjct: 181 VLPNAYTYTVLIKSLAESGDEKLLAESKKYFMEMMGKGIRPNPGTCVAVFEGIVKGGKEE 240

Query: 241 EGRELLNEMKGKGFVGDEKGVREVLKGKKGHVVRNVIDIL 274
           EGR+L+ +MK  GF  D KG+RE+L  K+G V R+VI+IL
Sbjct: 241 EGRQLVMKMKALGFAPDHKGLRELLNNKRGQVFRSVINIL 267

[Close]

BLAST of Spo05862.1 vs. UniProtKB/TrEMBL
Match: F6I4J5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00050 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.200e-63
Identity = 135/236 (57.20%), Postives = 169/236 (71.61%), Query Frame = 1

		  
Query: 47  KPNTKVSFSPPNSS------VSKPESEPTQNKNTDLPPSYNPFTNKPVNAEPKDPNNLKE 106
           + +TK++FSP +S       + K + E  ++K   LPP Y+PF+ K    EPKDP +L++
Sbjct: 75  RSSTKINFSPSDSDSDSETMIKKTKHEIDKSK---LPPPYDPFSKKLAIEEPKDPKDLQD 134

Query: 107 IFHKMRTDGLISNAVKMFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAG 166
           IFHKMRT+GL+ NAVKMFD +SK GLTH+  E+F  IK  G MPDVVAHTAVIEAYA AG
Sbjct: 135 IFHKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANAG 194

Query: 167 QCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCV 226
           Q K A  VY++ML  GV+PNAYTYSVLIK LA    + EAK+YVLEM+GKGMR N GT  
Sbjct: 195 QSKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMRPNAGTYT 254

Query: 227 AVIEAFVREGKEEEGRELLNEMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
           A+ E F +E K EEGRE L +MK KGF  DEK VRE+LK ++G V R+++DIL  K
Sbjct: 255 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 307

[Close]

BLAST of Spo05862.1 vs. ExPASy Swiss-Prot
Match: PP356_ARATH (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.800e-18
Identity = 74/257 (28.79%), Postives = 119/257 (46.30%), Query Frame = 1

		  
Query: 24  TPNLITRRFSSSEPNPTSPE----PKPKPNTKVSFS--------PPNSSVSKPESEPTQN 83
           TP++   RF S+  N    E    P+P PN  +           PP           T  
Sbjct: 22  TPSMSATRFLSTGDNGQVDEQQNPPEPLPNRPLRGERSSNSHREPPARQAHNLGKSDTTL 81

Query: 84  KNTDLPPSYNPFTNKPVNAEPKD----------PNNLKEIFHKMRTDGLISNAVKMFDEM 143
            +      +    N+     PK           P +  EIF KM+  GLI NAV M D +
Sbjct: 82  SDDGFLEQFKLGVNQDSRETPKPEQYPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGL 141

Query: 144 SKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPNA 203
            K GL  +  ++F +++  G +P+VV +TAV+EA+  A + + A  ++ KM   G+ PNA
Sbjct: 142 CKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNA 201

Query: 204 YTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLNE 259
           ++Y VL++ L    M+ +A  +  EML  G   N  T V +++A  R    E+ +  ++ 
Sbjct: 202 FSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDT 261

[Close]

BLAST of Spo05862.1 vs. ExPASy Swiss-Prot
Match: PPR97_ARATH (Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.300e-12
Identity = 45/163 (27.61%), Postives = 82/163 (50.31%), Query Frame = 1

		  
Query: 91  EPKDPNNLKEIFHKMRTDGLISNAVK---MFDEMSKHGLTHDTFEMFKVIKQTGKMPDVV 150
           + +D +N + +F +M +DG+  + +    + D +  +G       +F+ +++     D+V
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462

Query: 151 AHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEM 210
            +T +IEA   AG+ +   +++  +   GV PN  TY+ ++      G+  EA    +EM
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522

Query: 211 LGKGMRLNPGTCVAVIEAFVREGKEEEGRELLNEMKGKGFVGD 251
              G   N GT   +I A +R+G E    EL+ EM+  GF GD
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565

[Close]

BLAST of Spo05862.1 vs. ExPASy Swiss-Prot
Match: PPR96_ARATH (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.300e-12
Identity = 46/168 (27.38%), Postives = 82/168 (48.81%), Query Frame = 1

		  
Query: 94  DPNNLKEIFHKMRTDGLISNAVK---MFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHT 153
           D +  ++IF KM +DG+  + +    + D + K+G       +F+ ++++   PD+  + 
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504

Query: 154 AVIEAYAGAGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEMLGK 213
            +IE    AG+ +   +++  +   GV PN   Y+ +I      G+  EA     EM   
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564

Query: 214 GMRLNPGTCVAVIEAFVREGKEEEGRELLNEMKGKGFVGDEKGVREVL 259
           G   N GT   +I A +R+G +    EL+ EM+  GFVGD   +  V+
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612

[Close]

BLAST of Spo05862.1 vs. ExPASy Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.900e-12
Identity = 43/150 (28.67%), Postives = 78/150 (52.00%), Query Frame = 1

		  
Query: 100 EIFHKMRTDGLISNAV---KMFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAY 159
           ++FH+M   GL  ++V   ++ +   K G   D F +   + Q G  P+VV +T +I+  
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 160 AGAGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNP 219
              G    A+ +  +M   G+ PN +TY+ ++  L   G I EA + V E    G+  + 
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 220 GTCVAVIEAFVREGKEEEGRELLNEMKGKG 247
            T   +++A+ + G+ ++ +E+L EM GKG
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556

[Close]

BLAST of Spo05862.1 vs. ExPASy Swiss-Prot
Match: PP409_ARATH (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.900e-11
Identity = 40/156 (25.64%), Postives = 81/156 (51.92%), Query Frame = 1

		  
Query: 79  SYNPFTNKPVNAEPKDPNNLKEIFHKMRTDGLISNAVK---MFDEMSKHGLTHDTFEMFK 138
           ++N  TN  V     +   + +   KM  +G   + V    +     + G   + F ++K
Sbjct: 238 TFNILTN--VFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYK 297

Query: 139 VIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGG 198
           ++ +   +PD+V +T++I+     G+ + AH  + +M+  G+ P+  +Y+ LI +    G
Sbjct: 298 IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG 357

Query: 199 MIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGK 232
           M+ ++K+ + EMLG  +  +  TC  ++E FVREG+
Sbjct: 358 MMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391

[Close]

BLAST of Spo05862.1 vs. TAIR (Arabidopsis)
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 242.7 bits (618), Expect = 2.700e-64
Identity = 135/232 (58.19%), Postives = 165/232 (71.12%), Query Frame = 1

		  
Query: 49  NTKVSFS-PPNSSVSKPESEPTQN--KNTDLPPSYNPFTNKPVNAEPKDPNNLKEIFHKM 108
           NTKV+FS   + S  + E++ T++  K    PP Y+PF+ KP   EP+DP NL+EIFHKM
Sbjct: 132 NTKVNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFSKKPAIEEPEDPKNLQEIFHKM 191

Query: 109 RTDGLISNAVKMFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGA 168
           RT+G  + AVKMFD +SK G TH+  E+F  IK   +MPDVVAHTA++EAYA AGQ K  
Sbjct: 192 RTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKET 251

Query: 169 HNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMI-MEAKEYVLEMLGKGMRLNPGTCVAVIE 228
             V+++MLA GV PNAYTYSVLIK LAA G    +AK+Y+LEM+G GM  N  T  AV E
Sbjct: 252 LKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFE 311

Query: 229 AFVREGKEEEGRELLNEMKGKGFVGDEKGVREVLKGKKGHVVRNVIDILCAK 277
           AFVREGKEE  RELL EMKGKGFV DEK VRE L+ K+G V R VI++L  K
Sbjct: 312 AFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQVFRTVINLLFDK 363

[Close]

BLAST of Spo05862.1 vs. TAIR (Arabidopsis)
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.700e-19
Identity = 74/257 (28.79%), Postives = 119/257 (46.30%), Query Frame = 1

		  
Query: 24  TPNLITRRFSSSEPNPTSPE----PKPKPNTKVSFS--------PPNSSVSKPESEPTQN 83
           TP++   RF S+  N    E    P+P PN  +           PP           T  
Sbjct: 22  TPSMSATRFLSTGDNGQVDEQQNPPEPLPNRPLRGERSSNSHREPPARQAHNLGKSDTTL 81

Query: 84  KNTDLPPSYNPFTNKPVNAEPKD----------PNNLKEIFHKMRTDGLISNAVKMFDEM 143
            +      +    N+     PK           P +  EIF KM+  GLI NAV M D +
Sbjct: 82  SDDGFLEQFKLGVNQDSRETPKPEQYPQEPLPPPEDSDEIFKKMKEGGLIPNAVAMLDGL 141

Query: 144 SKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPNA 203
            K GL  +  ++F +++  G +P+VV +TAV+EA+  A + + A  ++ KM   G+ PNA
Sbjct: 142 CKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNA 201

Query: 204 YTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNPGTCVAVIEAFVREGKEEEGRELLNE 259
           ++Y VL++ L    M+ +A  +  EML  G   N  T V +++A  R    E+ +  ++ 
Sbjct: 202 FSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDT 261

[Close]

BLAST of Spo05862.1 vs. TAIR (Arabidopsis)
Match: AT1G63070.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 75.1 bits (183), Expect = 7.600e-14
Identity = 45/163 (27.61%), Postives = 82/163 (50.31%), Query Frame = 1

		  
Query: 91  EPKDPNNLKEIFHKMRTDGLISNAVK---MFDEMSKHGLTHDTFEMFKVIKQTGKMPDVV 150
           + +D +N + +F +M +DG+  + +    + D +  +G       +F+ +++     D+V
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462

Query: 151 AHTAVIEAYAGAGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEM 210
            +T +IEA   AG+ +   +++  +   GV PN  TY+ ++      G+  EA    +EM
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522

Query: 211 LGKGMRLNPGTCVAVIEAFVREGKEEEGRELLNEMKGKGFVGD 251
              G   N GT   +I A +R+G E    EL+ EM+  GF GD
Sbjct: 523 KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565

[Close]

BLAST of Spo05862.1 vs. TAIR (Arabidopsis)
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.300e-13
Identity = 46/168 (27.38%), Postives = 82/168 (48.81%), Query Frame = 1

		  
Query: 94  DPNNLKEIFHKMRTDGLISNAVK---MFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHT 153
           D +  ++IF KM +DG+  + +    + D + K+G       +F+ ++++   PD+  + 
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504

Query: 154 AVIEAYAGAGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEMLGK 213
            +IE    AG+ +   +++  +   GV PN   Y+ +I      G+  EA     EM   
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564

Query: 214 GMRLNPGTCVAVIEAFVREGKEEEGRELLNEMKGKGFVGDEKGVREVL 259
           G   N GT   +I A +R+G +    EL+ EM+  GFVGD   +  V+
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612

[Close]

BLAST of Spo05862.1 vs. TAIR (Arabidopsis)
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 2.200e-13
Identity = 43/150 (28.67%), Postives = 78/150 (52.00%), Query Frame = 1

		  
Query: 100 EIFHKMRTDGLISNAV---KMFDEMSKHGLTHDTFEMFKVIKQTGKMPDVVAHTAVIEAY 159
           ++FH+M   GL  ++V   ++ +   K G   D F +   + Q G  P+VV +T +I+  
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 160 AGAGQCKGAHNVYLKMLAYGVLPNAYTYSVLIKSLAAGGMIMEAKEYVLEMLGKGMRLNP 219
              G    A+ +  +M   G+ PN +TY+ ++  L   G I EA + V E    G+  + 
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 220 GTCVAVIEAFVREGKEEEGRELLNEMKGKG 247
            T   +++A+ + G+ ++ +E+L EM GKG
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556

The following BLAST results are available for this feature:

BLAST of Spo05862.1 vs. NCBI nr
BLAST of Spo05862.1 vs. UniProtKB/TrEMBL
BLAST of Spo05862.1 vs. ExPASy Swiss-Prot
BLAST of Spo05862.1 vs. TAIR (Arabidopsis)

BLAST of Spo05862.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902239233\|gb\|KNA25515.1\|	1.2e-149	99.6	hypothetical protein SOVF_0060...	[more]
gi\|731343429\|ref\|XP_010682888.1\|	6.1e-90	67.5	PREDICTED: pentatricopeptide r...	[more]
gi\|657957641\|ref\|XP_008370323.1\|	3.1e-65	59.1	PREDICTED: pentatricopeptide r...	[more]
gi\|147828501\|emb\|CAN77580.1\|	1.2e-64	57.6	hypothetical protein VITISV_01...	[more]
gi\|976927442\|gb\|KVI11159.1\|	3.4e-64	52.5	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo05862.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9S189_SPIOL	8.1e-150	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8C268_BETVU	4.3e-90	67.5	Uncharacterized protein OS=Bet...	[more]
A5C4I9_VITVI	8.1e-65	57.6	Putative uncharacterized prote...	[more]
A0A103YL97_CYNCS	2.3e-64	52.5	Pentatricopeptide repeat-conta...	[more]
F6I4J5_VITVI	1.2e-63	57.2	Putative uncharacterized prote...	[more]

BLAST of Spo05862.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
PP356_ARATH	4.8e-18	28.7	Pentatricopeptide repeat-conta...	[more]
PPR97_ARATH	1.3e-12	27.6	Pentatricopeptide repeat-conta...	[more]
PPR96_ARATH	2.3e-12	27.3	Pentatricopeptide repeat-conta...	[more]
PPR12_ARATH	3.9e-12	28.6	Pentatricopeptide repeat-conta...	[more]
PP409_ARATH	1.9e-11	25.6	Pentatricopeptide repeat-conta...	[more]

BLAST of Spo05862.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT5G03560.2	2.7e-64	58.1	Tetratricopeptide repeat (TPR)...	[more]
AT4G38150.1	2.7e-19	28.7	Pentatricopeptide repeat (PPR)...	[more]
AT1G63070.1	7.6e-14	27.6	pentatricopeptide (PPR) repeat...	[more]
AT1G62930.1	1.3e-13	27.3	Tetratricopeptide repeat (TPR)...	[more]
AT1G05670.1	2.2e-13	28.6	Pentatricopeptide repeat (PPR-...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 109..126 score: 0.75coord: 218..247 score: 8.
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 144..192 score: 3.6
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 182..215 score: 6.1E-5coord: 218..250 score: 9.4E-6coord: 147..181 score: 3.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 180..214 score: 9.865coord: 145..179 score: 9.558coord: 94..128 score: 6.347coord: 215..249 score: 9
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..252 score: 4.8
None	No IPR available	PANTHER	PTHR24015:SF562	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..252 score: 4.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
biological_process	GO:0015931	nucleobase-containing compound transport
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0015391	nucleobase:cation symporter activity