Spo05902.1 (mRNA) | SpinachBase

Overview


Name	Spo05902.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Lipid transfer protein
Location	chr1 : 48457778 .. 48462501 (-)
Sequence length	1534

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGTACATTACATTGACTAATTACAACAATCGTGTCATGTCATTATTTTATTTAATCAGACCAATAAATGTCTTAAATGGCACTCTCACCAATTTACATACAACCATAAAAGCAGCCATATATATCAAACACACTCCTTCACAATCTTTACACCACCACCTCAATTCACTATTTCCCTCCTAACTAAATTACCACGTCTTCCCAAACTCTTAACATGATGATGAACAAGTTGAAACTCCTCTTAACCATAACAACCGCCCTTTGCATCCTCCACGGGTCAGTCACCACCACCGCAGCACCACCACCTTCGTCGTCGTTGGCGACAGAGTGTAGCACGGCGGTGCAGCAGTTGATAAGCTGCTTAAACTTCGCGAAAGGCGGTGCGGCGGTGCCGGGTAAAGAGTGTTGCACATCGGTGACTAGCATGAAGGAGAAGCAGCCAGTTTGCTTGTGTTTCTTTATAGGGCAAGCTCATAATGGCAGTGAACAAATTAAGAGCCTTGGAATTCAAGAAGATAAGCTTTTGCAACTTCCTTCTGCTTGTCATCTTACTAATGCTAGTGCTTCTAATTGCCCTAGTAAGTATTTTATATAATATATATATTTTATACTGGCTGGTTACACTTTCTGTTCTAATTGGCTGGTTACACTTTCTGTTCTAATTTTATAGGGTTTTTTTTGTCATTTAACACTTAAAAAAGACAGTTTTTGTAATTTAACACCTTGCTTAATTTCTCTTATAATTAAACACCTTAAAAAAAAACGAATATTTTTTTCTAGGGTGTTAAATTACAAAAGTTGGTTTTTTTTAAGGAGTTAAATGATAAAAAGAATCTAATTTTATATCCATATATTGTTGGTTACACTTTTTCTTTTTTGTCGGAATTATTTTAATTATGTGTTATTGTGTTAATAATTACTACAAATGTTTGCATGTTATTTTGTTAATTTTTGTGTGGGTTTTTAAGGAAGTAGGTATTTTTGATAGATGATATGATTTCTAAGTTTATGATAGACTGATAGGTTAATCATAATATAAAATTAATTGTGTTTTCCGTCTGAATTTGGTTGTCAAATTAATTACTAGGAGTAGTTTTTTTTGAGGAATTAATTAATTTATGTGAATTTCTGTCAAAGTCAAAGTTTCTCTAATTACACTTAGAGTATCAATTTAGTAGGGAGAGATCAAGAGAGTGGAGTATAAATCTTAGCCAATTGTTTTTAATTAAAATTGTTTATTTTTGAACCACTAAACTTTTACAAAGTGAAAAATGATAATTAATCTCAATAATTAGGCATTAAATGTTTGTTAACTAACAAAAAGTTGAACCCTAATTATATTTGGGAATGATCAACCTTTAATGAGTATATATGCTTAACTAACATAAAAGTTTTTTGAACCTTGATGAGGTTCCTTACTAAATATAGAAGTATTTATATTAAAAGGCATCAACATAATAAATTAAAGTTAGTACCAACATTTTAGACCCGTGAGAGTAAATATTTTACCTATTGTTAAAAAAATAAAAACAAATTTTACATTACTTATCACAACAAAGTTCAAAACTTTGGGGATGTCGAAGCTCCTGGTCATCTCCTATGTTTTTGGCTTTTTGTCCCTCGTTGCACATATCTAGCTTTCTCTATAGGCTATAATAATTTCGTGTCATTAATAATGACAAAAACAGATAATGTTAACTTTCAAATTTGTAATGCCCTTACGACTTGAGGAGGTTTTCTGAATCTATACTGGGTATACCATTAAAATGGTATACTAAGGGCAAAATTGTAATTTTAGTCGATATATTAAGGGCTAAATGGTAAGGTCAAGTAATAAATCGAGTCTGGCCCACGAAAAATAACATTTATCTTTCACTTGTGAGTACCAAACTACGTTGTTTGGAACAATAAAAATGAAACCACGTTAGCAAAGTATGTTGTTTGGTATCGCATGAGAAAATACAACTACTTTTCTTGTACCAAAATATGTGATTTGGTACTAAATAAAAATACAGAATATTAATATACTATTTCAATGGTATATCCAGTATAGATTAAGACTTCCTCCGACTCGAGTCACGTTAAAAAGAACAAAAAATGAATATAAAATCTTTCTTGTAATAAAGTGTTTTTAAGACTTCCAAGTTCCAACTAACTAATTAGACCAATAATTGATATGTATCGCTAAAATTGACGGTCCATAAATGAATCATATTGGCCAACTACCTGAAATTAGGCCTCATAAATTCATTGCCATCCCTATTTATTTATTGCATAACCACCCTTGACGACGTATCATTAGATTTTGAATCATATCCCAATTCCCAAATCAGTGTTTCCGTCAACTCTATACTTGAATATATAGTCAATTTAACCTAACGGTTATGTTAAATGGTACCACAACTTTTAGAAAAGGTAAATTTGTCAAAAACTATCTTATAAAGTGGTTTATTTTTTGCGAAAAACTATCTTGTTAAAAAAAATGTTGTAATTACTACCTTATACGAGTATGTTGTAGGAAAAATTATGTTGTAAGATATTAGTACCTTTTTTGAATTATGAACGTTGAATCAAAACTCCGGGATTGACTTTACCATATGCATCTTACGTGTCATTTAATTACCATTTTTCACGTTAGATACCACGTGAGATACACATATTAAAATCAATCCTGAAATCTTGAATCAAAGTTATAATGCAACCAAAGGTAATATCTTACAATATAAATTTTTTATAAGCTAGTTAATTACAACATTTTTTTTATATAAATTACTAGTTTTTACAAAAATTCAATTGTATAAGGTAGTTTTTAACAAATTTGCCTTAAAAAAAAATTAACGGTCGAAATTTATCCATCAGAAAATTATGTTAAGAGTTACTCTGGATATTTTGTACTCCATAGTCCATACTAGACCTGTCAAAAATCGACTCGACCCGAAAATCGACCCGAATCCGACCCGAAAATACTGGGTCCTGAACAAGATTTTGTGACCCGTAACCCGATTTTATCCGAATCCGAGTAACCCGAAAAGTAATGGGTCAAAACCCGACCGAACCCGTTTTGGACCCGACCGATTGAAAATCGTTGTATTTATAGTAATAAATGAAATTTTAAGAAAATTTAAGCATAATAAACACGTTGTTTTTACTATTATTGTATGTAATATAATTTTAATTTGGATTATACGTCATTTTGGTAGAATTTGACTTAATATAAACTTGTGTAGGAAAATTTATTAATTTGTGCCCATATTTTGTATATTTATCACCTAAATTAATGAAAATATAATGCGCGTTTAAAATCTCTCAACCCGTTGGGTCGACCCGAACCCGAAAGTTCTGGGTCTTGAACAAGCATTTGTAAACCCGAACCCGAAAGTGACCGACCTGATCTAACCCGAACCCGATTTTTTTTTTTACAACCCGACCCGACTGACCCGTTTGACAGGTCTAGTCCATACATAAACTCTTAATGACAAATCATCAACTTTTGTGTAAGACCGCGCGCCTTACCGAAAATACCACTTTAATTGATTACTTAACTAAATTATTTCATTGCTTATTTAATAAGTTTCATTACTTAACTAATTGGTTTGTGCTTAACCAAATGATTTCATTTATAAACTTATATAATAGTAAGGCGGTCTTTTATGTAACACCACCTTATCTAAAAGTTTGTAATGAAAAAAATTGACAATGTAACACTAACCTGTTATACTACGTATATGTTATGTAACACTGACCAATGAATCTATATTGTACATATAGAGCTACTTGGGATATCTCCAACCTCACCAGCAGCATCCATATTCATGGCCAACGCCACAACCTCATCACCAGGAACACCGTCGTCGTCGTCATCGTCATCAACAAGCACCGTAGGAGGGAGCAAATCAAGTGGAAATAAGCTCGGAAACGGTGTATTTACCGGCTTTATGGCGGTTTTCGTGTCGGCGATCCTCTGTGTTCTTCCTGTTGTTGCATCTTTTCTGTAATTCTTCCATCTTGTTTTCTTAAACTCTATGTATTCACTGAGTTTATGATCGAGAGCTAAATAAGTAGAAGCTCTCGTACGTTGTAGTTCGGAAATTGTAGGAACTCTATCCATTTAATTATGTTGTGTTATTGAAATTGTGATTTGAACTATATGTTAAAGTACCTAGCTACTCTTGTATAACAACATTATTGTACGTGTGTTACTTTATTTGATTGTGAGGTTTGAACTTCACTACTTTGCTTTTATGTTTACCCTCTTCGTTCAAATTAAGTATGAGGCACGTACTATGGTATTAGATCGGGCCGTCTCGGGCCGATATGAGTAAAGCACGGTCCGACATTAGCGTAAAGTTGTGGGTTGTGGCCGAGCGGGGGATTAGACTGTAATTTTTAGAAAAATACATTGCAAATTAAAGCACTACGCGACTTGGTATGACAATGCGCATTAAATTGAGTAAAATTATACTTAGATACGAAGATATGGTCCGATTCAACACGAGGGCACGTGGGATTGGGCCGTACCTGATCGCCTTTTTGGAAATTTTGACCCTGCTCGACACGATATGGATATGAAGTTGCCTTAGTATGGGCAGACCCATTCAGGATAACAACACAAGTCACGATTCGATCTATATATCCCACGATCATCTTCAGACGTACGTATTTTTTGTTGGCTTACGTATTTGACATGTCCGTCATATGGGCCTCAAAATGTATGAGTAATATG

mRNA sequence

CGAGTACATTACATTGACTAATTACAACAATCGTGTCATGTCATTATTTTATTTAATCAGACCAATAAATGTCTTAAATGGCACTCTCACCAATTTACATACAACCATAAAAGCAGCCATATATATCAAACACACTCCTTCACAATCTTTACACCACCACCTCAATTCACTATTTCCCTCCTAACTAAATTACCACGTCTTCCCAAACTCTTAACATGATGATGAACAAGTTGAAACTCCTCTTAACCATAACAACCGCCCTTTGCATCCTCCACGGGTCAGTCACCACCACCGCAGCACCACCACCTTCGTCGTCGTTGGCGACAGAGTGTAGCACGGCGGTGCAGCAGTTGATAAGCTGCTTAAACTTCGCGAAAGGCGGTGCGGCGGTGCCGGGTAAAGAGTGTTGCACATCGGTGACTAGCATGAAGGAGAAGCAGCCAGTTTGCTTGTGTTTCTTTATAGGGCAAGCTCATAATGGCAGTGAACAAATTAAGAGCCTTGGAATTCAAGAAGATAAGCTTTTGCAACTTCCTTCTGCTTGTCATCTTACTAATGCTAGTGCTTCTAATTGCCCTAAGCTACTTGGGATATCTCCAACCTCACCAGCAGCATCCATATTCATGGCCAACGCCACAACCTCATCACCAGGAACACCGTCGTCGTCGTCATCGTCATCAACAAGCACCGTAGGAGGGAGCAAATCAAGTGGAAATAAGCTCGGAAACGGTGTATTTACCGGCTTTATGGCGGTTTTCGTGTCGGCGATCCTCTGTGTTCTTCCTGTTGTTGCATCTTTTCTGTAATTCTTCCATCTTGTTTTCTTAAACTCTATGTATTCACTGAGTTTATGATCGAGAGCTAAATAAGTAGAAGCTCTCGTACGTTGTAGTTCGGAAATTGTAGGAACTCTATCCATTTAATTATGTTGTGTTATTGAAATTGTGATTTGAACTATATGTTAAAGTACCTAGCTACTCTTGTATAACAACATTATTGTACGTGTGTTACTTTATTTGATTGTGAGGTTTGAACTTCACTACTTTGCTTTTATGTTTACCCTCTTCGTTCAAATTAAGTATGAGGCACGTACTATGGTATTAGATCGGGCCGTCTCGGGCCGATATGAGTAAAGCACGGTCCGACATTAGCGTAAAGTTGTGGGTTGTGGCCGAGCGGGGGATTAGACTGTAATTTTTAGAAAAATACATTGCAAATTAAAGCACTACGCGACTTGGTATGACAATGCGCATTAAATTGAGTAAAATTATACTTAGATACGAAGATATGGTCCGATTCAACACGAGGGCACGTGGGATTGGGCCGTACCTGATCGCCTTTTTGGAAATTTTGACCCTGCTCGACACGATATGGATATGAAGTTGCCTTAGTATGGGCAGACCCATTCAGGATAACAACACAAGTCACGATTCGATCTATATATCCCACGATCATCTTCAGACGTACGTATTTTTTGTTGGCTTACGTATTTGACATGTCCGTCATATGGGCCTCAAAATGTATGAGTAATATG

Coding sequence (CDS)

ATGATGATGAACAAGTTGAAACTCCTCTTAACCATAACAACCGCCCTTTGCATCCTCCACGGGTCAGTCACCACCACCGCAGCACCACCACCTTCGTCGTCGTTGGCGACAGAGTGTAGCACGGCGGTGCAGCAGTTGATAAGCTGCTTAAACTTCGCGAAAGGCGGTGCGGCGGTGCCGGGTAAAGAGTGTTGCACATCGGTGACTAGCATGAAGGAGAAGCAGCCAGTTTGCTTGTGTTTCTTTATAGGGCAAGCTCATAATGGCAGTGAACAAATTAAGAGCCTTGGAATTCAAGAAGATAAGCTTTTGCAACTTCCTTCTGCTTGTCATCTTACTAATGCTAGTGCTTCTAATTGCCCTAAGCTACTTGGGATATCTCCAACCTCACCAGCAGCATCCATATTCATGGCCAACGCCACAACCTCATCACCAGGAACACCGTCGTCGTCGTCATCGTCATCAACAAGCACCGTAGGAGGGAGCAAATCAAGTGGAAATAAGCTCGGAAACGGTGTATTTACCGGCTTTATGGCGGTTTTCGTGTCGGCGATCCTCTGTGTTCTTCCTGTTGTTGCATCTTTTCTGTAA

Protein sequence

MMMNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVPGKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNCPKLLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAVFVSAILCVLPVVASFL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo05902	Spo05902	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo05902.1	Spo05902.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05902.1.utr5p.1	Spo05902.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05902.1.CDS.2	Spo05902.1.CDS.2	CDS
Spo05902.1.CDS.1	Spo05902.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05902.1.utr3p.1	Spo05902.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05902.1.exon.2	Spo05902.1.exon.2	exon
Spo05902.1.exon.1	Spo05902.1.exon.1	exon

Homology

[Close]

BLAST of Spo05902.1 vs. NCBI nr
Match: gi|902210406|gb|KNA16415.1| (hypothetical protein SOVF_089310 [Spinacia oleracea])

HSP 1 Score: 362.1 bits (928), Expect = 6.200e-97
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


		  
Query: 1   MMMNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVP 60
           MMMNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVP
Sbjct: 1   MMMNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVP 60

Query: 61  GKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNC 120
           GKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNC
Sbjct: 61  GKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNC 120

Query: 121 PKLLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV 180
           PKLLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV
Sbjct: 121 PKLLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV 180

Query: 181 FVSAILCVLPVVASFL 197
           FVSAILCVLPVVASFL
Sbjct: 181 FVSAILCVLPVVASFL 196

[Close]

BLAST of Spo05902.1 vs. NCBI nr
Match: gi|731343164|ref|XP_010682757.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 215.3 bits (547), Expect = 9.400e-53
Identity = 126/192 (65.62%), Postives = 152/192 (79.17%), Query Frame = 1


		  
Query: 1   MMMNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVP 60
           M MNKLKL L + T L  ++G +T  ++   +++L  +CSTAVQQLISCLNFAKG    P
Sbjct: 2   MNMNKLKLSLMMVTLL--IYGFMTIKSSE--ATTLTQQCSTAVQQLISCLNFAKGDVPTP 61

Query: 61  GKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNC 120
            KECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQE KLLQLPS+CH+ NASA++C
Sbjct: 62  TKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEAKLLQLPSSCHINNASATDC 121

Query: 121 PKLLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV 180
           P+LLGISPTSPAASIFM N T+S+P T  S+SSSS+S   G+ +S N  GNGV + F+AV
Sbjct: 122 PRLLGISPTSPAASIFMKNGTSSTPTT--STSSSSSSPTNGAGNSINMNGNGVLSSFIAV 181

Query: 181 FVSAILCVLPVV 193
           FV+ IL V  ++
Sbjct: 182 FVTVILSVSTMI 187

[Close]

BLAST of Spo05902.1 vs. NCBI nr
Match: gi|870855737|gb|KMT07453.1| (hypothetical protein BVRB_6g150720 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 208.4 bits (529), Expect = 1.200e-50
Identity = 116/175 (66.29%), Postives = 142/175 (81.14%), Query Frame = 1


		  
Query: 18  ILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVPGKECCTSVTSMKEKQPV 77
           +++G +T  ++   +++L  +CSTAVQQLISCLNFAKG    P KECCTSVTSMKEKQPV
Sbjct: 5   LIYGFMTIKSSE--ATTLTQQCSTAVQQLISCLNFAKGDVPTPTKECCTSVTSMKEKQPV 64

Query: 78  CLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNCPKLLGISPTSPAASIFM 137
           CLCFFIGQAHNGSEQIKSLGIQE KLLQLPS+CH+ NASA++CP+LLGISPTSPAASIFM
Sbjct: 65  CLCFFIGQAHNGSEQIKSLGIQEAKLLQLPSSCHINNASATDCPRLLGISPTSPAASIFM 124

Query: 138 ANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAVFVSAILCVLPVV 193
            N T+S+P T  S+SSSS+S   G+ +S N  GNGV + F+AVFV+ IL V  ++
Sbjct: 125 KNGTSSTPTT--STSSSSSSPTNGAGNSINMNGNGVLSSFIAVFVTVILSVSTMI 175

[Close]

BLAST of Spo05902.1 vs. NCBI nr
Match: gi|802724321|ref|XP_012085688.1| (PREDICTED: non-specific lipid transfer protein GPI-anchored 1 [Jatropha curcas])

HSP 1 Score: 140.6 bits (353), Expect = 3.000e-30
Identity = 89/180 (49.44%), Postives = 112/180 (62.22%), Query Frame = 1


		  
Query: 3   MNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVPGK 62
           M  LK+ + +   L  ++G+           +LA +CS  +Q++  CLN+A G A  P K
Sbjct: 1   MESLKIAIMVMFLLSSVNGA-----------NLAEDCSADLQKVTPCLNYATGKANTPTK 60

Query: 63  ECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNCPK 122
           +CC SV  +KE  P CLCF I Q HNGS QIKSLGIQE KLLQLPSAC L NAS S CPK
Sbjct: 61  DCCGSVKELKESDPKCLCFMIQQTHNGSAQIKSLGIQETKLLQLPSACQLQNASISFCPK 120

Query: 123 LLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAVFV 182
           LLG+SP+SP A+IF  NAT SS  TP+SS+ +ST       SSG   G+G      A+F+
Sbjct: 121 LLGLSPSSPDAAIF-TNATASSSSTPTSSTGTSTPE-KSDDSSGTNHGSGPLAIAAAIFI 167

[Close]

BLAST of Spo05902.1 vs. NCBI nr
Match: gi|947082700|gb|KRH31489.1| (hypothetical protein GLYMA_11G251100 [Glycine max])

HSP 1 Score: 140.2 bits (352), Expect = 3.900e-30
Identity = 73/157 (46.50%), Postives = 107/157 (68.15%), Query Frame = 1


		  
Query: 32  SSSLATECSTAVQQLISCLNFAKGGAAVPGKECCTSVTSMKEKQPVCLCFFIGQAHNGSE 91
           +  LAT+CS  +Q++I CL+FAKG    P K+CC + TS+KE  P CLC+ I + H GS 
Sbjct: 32  ADDLATKCSAVIQKVIPCLDFAKGKEETPKKQCCDAATSIKESNPECLCYIIEETHKGSP 91

Query: 92  QIKSLGIQEDKLLQLPSACHLTNASASNCPKLLGISPTSPAASIFMANATTSSPGTPSSS 151
           Q+KSLGIQE KLLQLPS C++ NAS +NCPKLLG+SP+SP A+IF +N++ ++P  P++S
Sbjct: 92  QVKSLGIQEAKLLQLPSVCNVKNASITNCPKLLGLSPSSPDAAIFTSNSSKTTPSAPATS 151

Query: 152 SSSSTSTVGGSKSSGNKLGNGVFTGFMAVFVSAILCV 189
           +S +T+    + S G+ +       +  V   AI+ +
Sbjct: 152 NSQTTTPQSQNASYGSMVQPSSTVTYAIVMALAIVLI 188

[Close]

BLAST of Spo05902.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RA98_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089310 PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.400e-97
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1


		  
Query: 1   MMMNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVP 60
           MMMNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVP
Sbjct: 1   MMMNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVP 60

Query: 61  GKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNC 120
           GKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNC
Sbjct: 61  GKECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNC 120

Query: 121 PKLLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV 180
           PKLLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV
Sbjct: 121 PKLLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV 180

Query: 181 FVSAILCVLPVVASFL 197
           FVSAILCVLPVVASFL
Sbjct: 181 FVSAILCVLPVVASFL 196

[Close]

BLAST of Spo05902.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C5X4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g150720 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 8.000e-51
Identity = 116/175 (66.29%), Postives = 142/175 (81.14%), Query Frame = 1


		  
Query: 18  ILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVPGKECCTSVTSMKEKQPV 77
           +++G +T  ++   +++L  +CSTAVQQLISCLNFAKG    P KECCTSVTSMKEKQPV
Sbjct: 5   LIYGFMTIKSSE--ATTLTQQCSTAVQQLISCLNFAKGDVPTPTKECCTSVTSMKEKQPV 64

Query: 78  CLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNCPKLLGISPTSPAASIFM 137
           CLCFFIGQAHNGSEQIKSLGIQE KLLQLPS+CH+ NASA++CP+LLGISPTSPAASIFM
Sbjct: 65  CLCFFIGQAHNGSEQIKSLGIQEAKLLQLPSSCHINNASATDCPRLLGISPTSPAASIFM 124

Query: 138 ANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAVFVSAILCVLPVV 193
            N T+S+P T  S+SSSS+S   G+ +S N  GNGV + F+AVFV+ IL V  ++
Sbjct: 125 KNGTSSTPTT--STSSSSSSPTNGAGNSINMNGNGVLSSFIAVFVTVILSVSTMI 175

[Close]

BLAST of Spo05902.1 vs. UniProtKB/TrEMBL
Match: A0A067K3I6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17968 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.100e-30
Identity = 89/180 (49.44%), Postives = 112/180 (62.22%), Query Frame = 1


		  
Query: 3   MNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVPGK 62
           M  LK+ + +   L  ++G+           +LA +CS  +Q++  CLN+A G A  P K
Sbjct: 1   MESLKIAIMVMFLLSSVNGA-----------NLAEDCSADLQKVTPCLNYATGKANTPTK 60

Query: 63  ECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNCPK 122
           +CC SV  +KE  P CLCF I Q HNGS QIKSLGIQE KLLQLPSAC L NAS S CPK
Sbjct: 61  DCCGSVKELKESDPKCLCFMIQQTHNGSAQIKSLGIQETKLLQLPSACQLQNASISFCPK 120

Query: 123 LLGISPTSPAASIFMANATTSSPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAVFV 182
           LLG+SP+SP A+IF  NAT SS  TP+SS+ +ST       SSG   G+G      A+F+
Sbjct: 121 LLGLSPSSPDAAIF-TNATASSSSTPTSSTGTSTPE-KSDDSSGTNHGSGPLAIAAAIFI 167

[Close]

BLAST of Spo05902.1 vs. UniProtKB/TrEMBL
Match: A0A0B2SJJ9_GLYSO (Putative GPI-anchored protein OS=Glycine soja GN=glysoja_014485 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.700e-30
Identity = 73/157 (46.50%), Postives = 107/157 (68.15%), Query Frame = 1


		  
Query: 32  SSSLATECSTAVQQLISCLNFAKGGAAVPGKECCTSVTSMKEKQPVCLCFFIGQAHNGSE 91
           +  LAT+CS  +Q++I CL+FAKG    P K+CC + TS+KE  P CLC+ I + H GS 
Sbjct: 26  ADDLATKCSAVIQKVIPCLDFAKGKEETPKKQCCDAATSIKESNPECLCYIIEETHKGSP 85

Query: 92  QIKSLGIQEDKLLQLPSACHLTNASASNCPKLLGISPTSPAASIFMANATTSSPGTPSSS 151
           Q+KSLGIQE KLLQLPS C++ NAS +NCPKLLG+SP+SP A+IF +N++ ++P  P++S
Sbjct: 86  QVKSLGIQEAKLLQLPSVCNVKNASITNCPKLLGLSPSSPDAAIFTSNSSKTTPSAPATS 145

Query: 152 SSSSTSTVGGSKSSGNKLGNGVFTGFMAVFVSAILCV 189
           +S +T+    + S G+ +       +  V   AI+ +
Sbjct: 146 NSQTTTPQSQNASYGSMVQPSSTVTYAIVMALAIVLI 182

[Close]

BLAST of Spo05902.1 vs. UniProtKB/TrEMBL
Match: I1LN74_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G251100 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.700e-30
Identity = 73/157 (46.50%), Postives = 107/157 (68.15%), Query Frame = 1


		  
Query: 32  SSSLATECSTAVQQLISCLNFAKGGAAVPGKECCTSVTSMKEKQPVCLCFFIGQAHNGSE 91
           +  LAT+CS  +Q++I CL+FAKG    P K+CC + TS+KE  P CLC+ I + H GS 
Sbjct: 32  ADDLATKCSAVIQKVIPCLDFAKGKEETPKKQCCDAATSIKESNPECLCYIIEETHKGSP 91

Query: 92  QIKSLGIQEDKLLQLPSACHLTNASASNCPKLLGISPTSPAASIFMANATTSSPGTPSSS 151
           Q+KSLGIQE KLLQLPS C++ NAS +NCPKLLG+SP+SP A+IF +N++ ++P  P++S
Sbjct: 92  QVKSLGIQEAKLLQLPSVCNVKNASITNCPKLLGLSPSSPDAAIFTSNSSKTTPSAPATS 151

Query: 152 SSSSTSTVGGSKSSGNKLGNGVFTGFMAVFVSAILCV 189
           +S +T+    + S G+ +       +  V   AI+ +
Sbjct: 152 NSQTTTPQSQNASYGSMVQPSSTVTYAIVMALAIVLI 188

[Close]

BLAST of Spo05902.1 vs. ExPASy Swiss-Prot
Match: LTPG1_ARATH (Non-specific lipid transfer protein GPI-anchored 1 OS=Arabidopsis thaliana GN=LTPG1 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.100e-29
Identity = 81/190 (42.63%), Postives = 118/190 (62.11%), Query Frame = 1


		  
Query: 3   MNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVPGK 62
           M  L L L + T   +   S+   A   P  +LA EC+   Q++  CL+FA G A +P K
Sbjct: 1   MKGLHLHLVLVTMTIV--ASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSK 60

Query: 63  ECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNCPK 122
           +CC +V  +KE+ P CLCF I QA  G + +K LG+QEDKL+QLP++C L NAS +NCPK
Sbjct: 61  KCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTSCQLHNASITNCPK 120

Query: 123 LLGISPTSPAASIFMANATTS--SPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV 182
           LLGISP+SP A++F  NATT+  +P   S ++ ++++  GGS S+  K G+ V    +A+
Sbjct: 121 LLGISPSSPDAAVFTNNATTTPVAPAGKSPATPATSTDKGGSASA--KDGHAVVALAVAL 180

Query: 183 FVSAILCVLP 191
              + +  LP
Sbjct: 181 MAVSFVLTLP 186

[Close]

BLAST of Spo05902.1 vs. TAIR (Arabidopsis)
Match: AT1G27950.1 (glycosylphosphatidylinositol-anchored lipid protein transfer 1)

HSP 1 Score: 131.3 bits (329), Expect = 6.300e-31
Identity = 81/190 (42.63%), Postives = 118/190 (62.11%), Query Frame = 1


		  
Query: 3   MNKLKLLLTITTALCILHGSVTTTAAPPPSSSLATECSTAVQQLISCLNFAKGGAAVPGK 62
           M  L L L + T   +   S+   A   P  +LA EC+   Q++  CL+FA G A +P K
Sbjct: 1   MKGLHLHLVLVTMTIV--ASIAAAAPAAPGGALADECNQDFQKVTLCLDFATGKATIPSK 60

Query: 63  ECCTSVTSMKEKQPVCLCFFIGQAHNGSEQIKSLGIQEDKLLQLPSACHLTNASASNCPK 122
           +CC +V  +KE+ P CLCF I QA  G + +K LG+QEDKL+QLP++C L NAS +NCPK
Sbjct: 61  KCCDAVEDIKERDPKCLCFVIQQAKTGGQALKDLGVQEDKLIQLPTSCQLHNASITNCPK 120

Query: 123 LLGISPTSPAASIFMANATTS--SPGTPSSSSSSSTSTVGGSKSSGNKLGNGVFTGFMAV 182
           LLGISP+SP A++F  NATT+  +P   S ++ ++++  GGS S+  K G+ V    +A+
Sbjct: 121 LLGISPSSPDAAVFTNNATTTPVAPAGKSPATPATSTDKGGSASA--KDGHAVVALAVAL 180

Query: 183 FVSAILCVLP 191
              + +  LP
Sbjct: 181 MAVSFVLTLP 186

[Close]

BLAST of Spo05902.1 vs. TAIR (Arabidopsis)
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 52.4 bits (124), Expect = 3.700e-7
Identity = 40/124 (32.26%), Postives = 59/124 (47.58%), Query Frame = 1


		  
Query: 39  CSTAVQQLISCLNFAKGGAAVPGKECCTSVTSMKEKQPV--CLCFFIGQAHNGSEQIKSL 98
           C  A+  L SCL F    A  P   CC+++    +K     CLC  +    +     K  
Sbjct: 38  CQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRKCLCTLVKDRDDPGLGFK-- 97

Query: 99  GIQEDKLLQLPSACHLTNASASNCPKLLGISPTSPAASIFMANATTSSPGTPSSSSSSST 158
            +  ++ + LPSACH+  A+ S CP LL + P SPA+ IF     +SS      + S+S+
Sbjct: 98  -VDANRAMSLPSACHVP-ANISQCPDLLHLLPDSPASQIFKQFTESSSQTVGHKAVSTSS 157

Query: 159 STVG 161
           S  G
Sbjct: 158 SIKG 157

The following BLAST results are available for this feature:

BLAST of Spo05902.1 vs. NCBI nr
BLAST of Spo05902.1 vs. UniProtKB/TrEMBL
BLAST of Spo05902.1 vs. ExPASy Swiss-Prot
BLAST of Spo05902.1 vs. TAIR (Arabidopsis)

BLAST of Spo05902.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210406\|gb\|KNA16415.1\|	6.2e-97	100.	hypothetical protein SOVF_0893...	[more]
gi\|731343164\|ref\|XP_010682757.1\|	9.4e-53	65.6	PREDICTED: non-specific lipid ...	[more]
gi\|870855737\|gb\|KMT07453.1\|	1.2e-50	66.2	hypothetical protein BVRB_6g15...	[more]
gi\|802724321\|ref\|XP_012085688.1\|	3.0e-30	49.4	PREDICTED: non-specific lipid ...	[more]
gi\|947082700\|gb\|KRH31489.1\|	3.9e-30	46.5	hypothetical protein GLYMA_11G...	[more]

BLAST of Spo05902.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RA98_SPIOL	4.4e-97	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C5X4_BETVU	8.0e-51	66.2	Uncharacterized protein OS=Bet...	[more]
A0A067K3I6_JATCU	2.1e-30	49.4	Uncharacterized protein OS=Jat...	[more]
A0A0B2SJJ9_GLYSO	2.7e-30	46.5	Putative GPI-anchored protein ...	[more]
I1LN74_SOYBN	2.7e-30	46.5	Uncharacterized protein OS=Gly...	[more]

BLAST of Spo05902.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
LTPG1_ARATH	1.1e-29	42.6	Non-specific lipid transfer pr...	[more]

BLAST of Spo05902.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G27950.1	6.3e-31	42.6	glycosylphosphatidylinositol-a...	[more]
AT3G58550.1	3.7e-7	32.2	Bifunctional inhibitor/lipid-t...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 27..120 score: 2.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 39..120 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 37..120 score: 8.82
None	No IPR available	GENE3D	1.10.110.10		coord: 37..118 score: 5.2
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 1..186 score: 2.4
None	No IPR available	PANTHER	PTHR33044:SF7	NON-SPECIFIC LIPID TRANSFER PROTEIN GPI-ANCHORED 1	coord: 1..186 score: 2.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane