Spo05992.1 (mRNA) | SpinachBase

Overview


Name	Spo05992.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Nuclear pore complex protein NUP54 (Nucleoporin 54)
Location	chr1 : 48784544 .. 48793528 (+)
Sequence length	1562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGATGTAATCAATGTGTGTATCATGTATTATGACTTAACCCTTTCGATCTTTGCTTTGGATCAGTTATAGATTTCGTGTGTTTTTTAATGTTATGGTGTAAATAAGCTAATCTGATACAAATTCTATACAACGTATTGCAATTTCCCTTACCCCGACCCGTACTAAGAAGTGCTCATCTTTGCTCATCGTTTTAGTAACCCTGACTAAGGTGTCACAAAAGCCAGGCTTTGTTACTCGCAATCGCAAAATACGTCCTTTTTTTTTAGTTTTGATTTAACAAAATAATAATTAGACGTTGATGTTTAGGTTCCCGATATTGCTACTTGATCCTTTCAACAAGAAAATTACATTTCATCCGTTTAAAAGTTGTAACACTTTTAATTTTGTCATTATTCATGACTTCAGGTACTAACGTTGGCGGTTAAGAGTTTCGTATATATATTTTTTAAAAAAAAATTCAACGTAAAACCGCTAACGGTATTAGCGGTTCATATATTAGAACCACTAACTGTGGTAGCAGTTTATTCTAAAGAACAACTAACAGTGGTAGCGGTTCTCTATGTTAAACCGGTACCAAATACGTAATATGAACCGCTAACAGTGGTAGCGGTTCTTTAATATAAACCGCTATTGGTGTTAGCGGGTCTAATATATGAACCGCTAATACCTTTAGCGGTTTTATGTTGATTTTTTTTTAAAAATCATACAAAGTTCTTACCCGATTCTCCATGGACGGTACCATGAGAATTAGTTTTTAAACCCAATGCAAATTGGGAATTAGTTTACGATTTAGCTATTTGTAGGGAAATCGTTCTTTCATTATACTCCATATGATTTTGTAATAATAAATTTTATAATTTTGGTTAGAGTTAATTTTTTTTTGAGATAAATATTTAGAGATAATTACGATCAAAGTTATACCCCTCCGTATTTATTTAAGAGATACACTTGGTCGGGCACGGGTATTAAGAAAAACAATTGAATGAAATAAAGTAATAAAACAAGTGGGGTTGAGTATATTTAATAAGTAAAATAAGTGGGTACCATGTCATTTTAGGGGATGGAGGGTGTGGATGGGTTGTAAATAGATTACGAGTATTAATTAGAGGGTGGTGTTGATAAATTAATTAGAGGGTGGTGTTGATAAATTACAGAGTATCTCTTAAATAAATACCAAAAGGTCTTGCGCGCACGAGGTGTACAATAAATTTATTGTACACCAAGATAACTTTTATGCAGTTTTTTGTAACTTTAACCTATTTTTCTGTAACTTTTATATTATAAAATTAAAAAGTTGATAGATAAACATTTTAAATGGTTAAATGATTAATTTATACATTATTAGTGATTTTGAAGAAATAATTTTTATTCAAATGAAAAAATTTATCATTAAAAAATAGATAACTTTTACATATATAAATGTAACTTTTAAGCATTTTTAGTCAACTTTTACTCTGGTATACAATATTTCCCATTATAAGTAAGAAGTTGTGAATAAATACGGCCGGAAAAAGTAAGTGTAGAGGGAGTATATAGATAAATACGCAATTTAGTAAGGAAAGTTGGAAAATTGGCCGAAAACAAAGTCAATGCTCGGAAAAAGTTTACTCAATTGAAAATATTTCTGAAAATAAGACATTACTCAAACAAAACTCCCCTCCAAAATCAGGAAAACCCTTCTTCCCCAAAACCCCCAAAAGTCATTTCCCAAATTTCCACTCTCTTCTCCCCTCTCTCTAATCTCCGCCAAAATGTTCGGAGCATCTAATTCCGGCTTCGGAACTCCGTCGTTCGGAACACCGTCGTCAACCTCGGCGTTCGGAACTCCCTCGACAACCCCAGCTTTCGGAGCGGCTCCGTCGACGCCAGGTTTCGGCACTCCATCATCGCCTTTTCTCGGATCTTCTATCTTCAATACTCCCTCTCCTTTCGCACAGAATACTCAGCAGCAGCAGCAAACGACGCCGTTTTCGCAGCAGCCGAGTACCGGATTCGGCTTCAATTCGACTTTGTTTCAATCTCCACTTCAACAACAGCAACAGCAACAACAGCCGCAGCAAATGACGCCGTTCAATCTTTCCGGTGTTCAGCAGCTCACCACTCAAATGGCTCCTGTCGCTCCATTACCTTTTTCCCTTGCCGAGCGTGACATTCAGGTCTCCCTACTTCTTTGATAGCAATTTATAGCATTTTGAAACCCTAATTTTTCGATTTTCTTAATTGTTTTGTATTTAGTTTGTGATTAATTTGATTTCTAAGTTTATAATTTTGATTGTTTTTTTTTTTTATCATTTAGACTATTGTTGATGCTTACAAGGACGAACCTGGAAATACGAAGTATGCATTTAAGGTTAGTTTCCCGCCAAAAAAACTCCATATGAAATTGCTTTAAATTTTGATCTGCAGATGGAGAAAATCCTTATTACGTGCTGCCTTTATTTTGTGTTACATCCAGTATTATCAAGGAATGTAATGTTGTCGTATTTAGGTATCCAATTGAGGCTGGAATGTACAGGAAAACATTTAGTGTGAGCTTGAGTTGCTTAAAAAGAGGGATTTATCAAACTTTCACATATTTGAATGAGTGCTGACATTATATACTGATGTATTGAAATTGAAAATATCAAAAGATGTACCCATATACCATGTTACCAATATGTATATCAAACCATGGTTGTCTATTGCCTTTGTTACATAAACAATAATCTTTTGTGCACATACATATCTTTTTTTGCTTTGACATGGCAATGGTAAATGTTCTTGTTGGTGTTTCAGCATTTGCTATTCAGTGTGATGGATCCGCAATTAAAGGTTAAGCCACCTGGGGTATCAGATGTAAGTTCTTCAATATGTTACGTGGTTTAATATTTATAGCGGGATGTATCTTTTTTCTTTTAGTATATGCTTTCTATTGGAGCACAGAATGTAACTTTGAGGTTGTGATCTCTCGGTGGCGGTAGATAATGTGGGCTGAGGCGATGGGAAAACTTGAGGGCATGGACAGTACAAATCGGGAGCGCTTATGGCCTCAACTTGTACAAGGGTTCAAAGATCTCTCAAATCGTTTGAAGGTAGTCAGTCTGTGATTCTTCTTTAAAGTTGGTTAAATCAAATACTTCCATAAGGCCTGTTTTGACATGTCGAGTACTAATGTTAGTTACTTCATCTATATGCATAGATTTTTGTTCTTGCAATAACTAAACTGTCTTTTAGGTAGAAAAAGATAAATGATGGTAATGATTTTGCGTGTAATTTTGCAAGAAAAATTCCATTGTATTACAATTCCATCTCCAATTATGTGTTTTACTTCATAAATTTCTATACTCAATACCGTGCATAAAATGTTGACGAGTACTATGGGAACTTATGTCAGGAAACATGTATTTGAGAGCAGAGTTAAATTATCACCGACATTAACTTGATATATTTCGTTTAAAATTTCATACAATTCATTGACATTCTCGCCATTTATTAACCCCTACCAAACAGGGCTAAATGTAAGAATAGTCCTGCGAGATTAGTGCATACAAGGTCTGCAATATATCCATAATATTTGACTCCATCATATACATTATAATAAAGTTAAATAAGAAAGAGCACGATGAACTTGTATGGGTAGGCTATTATTAAATATTGAAAACTGATGTGTCAGAGAAAGTGAAAAGTAATGTCGAGCTAGAAGAATAGACAAATAAGAAAATGTTGATAACATGGTTCACTGATTTGGCCAATTTGTATGGGGTAGGGCATAATAGTTCTCTGTATGTGAGCTCAAGGGACCTTTCAGAGTATGGATTGCGGGATGGTAGTGCACTAGTGCATAGGTTTATCTAAGAGCTAATTTATTCCTATTATTTAACAGAGAAGTTCTGATTAGAATCTAGATGACCTGGGAGCAATGGAAATCTTATGGCATTGACCGTTCATTGGTACGCATACACTGATTTAAAATAGCAGGACGAGATGCACAACGCTATCACGCTATGGACATCTGAATTTCACATATCCCTCCGTATCATGCTTAAGGCTGAAGTCTTGTTGAAGACATTTGCATTTTCTATGAGCACCTTTGAAGGTTTATATACACTTAATAAAAAGTAAGGGGTTGAGGGCTTGCTATTAAATCAGGTTGGAGTGATTGTGTTATGTGTGTGGTCATTATGTTATGTTTAGTCAGGTTTGAGGGCTTGGTATTAAATCAGGTGGGAATGAATGCGTTATGTGTGAGATCATTATGTTATCTTCTGCCAATTTTTTAGAAAATGATCTTGAAAAGGCAATTGTTGTTCTCAACATATTATGCCTAAGATCTCAAGTTATTGCATCTACTTATTGCTTAAAGCCTGAGATCTTGAGCTCCATTAAAATAAACAAGCAAAGTCGCATCAATCAAGGTGTATTTTAAATCAATATTAGGGCTTTGGTTCTTTCTTTTTTGAAGTTTTTACTTTTCTCATCAAGTAGAAGCTACCCTCACCATTTTTAATAAGTGTATCGGTTTGACGGCACGTAGTTTTAGAAGTCTGAGTTGGATTTAGTATTTATATAATGCAGTGGGGTAAGTGAATGAAATCATTATTGCAGGGAAAAGATAGTGGACAAATTATTTTTTGTAATAAATTGATGGTGTGAGTATGTGGTAGGGACACGGAAGAGAAAAAATAAAATGATTGGTAATGGGGAATATGGTTGGAGAGAAATAATAAATAACTAGTTTTGAGGCCCGGATGCGGGATGCCCCGGTCATTACTTGGATGACAGTAATTATGTCGTTTGCAATAAAGAAAACTATAATTGAATCTGTATTTTTTATTAAAAATAATTGTTCTTCATTTTATTCGCTTTTATTATATTAGTATGTAAAAGACCACATACAATGTGCTATAGCATAGTGGATAAGTAATTAGTGTTCTAGCCGCGAGGTTATGAGTTCGAATCTTGCATAAATTATATTTCAAATTTTAAAAATGTATGTGGATAACATGGAACAATATATGTTGAAAAGAATGAGAAGAGCCACGTGGCATGATATACTTTCTTAGGAACGCCTTTTAATATATAGTATAGGTGTTGGAAAATTTCCAAAATAGGAAGTGAATAAGTGATGCAGTTATTTAAAAACAACCAATTATAGAAAGTGATGCAGTTATTAAAAAACAGAAGGAGTATTAGATTTGTAGGCTTTTGTAGCTGGAATTTAGAAGTATGGCGGTTTAAGCAAGTGAGTTTCTGTAAATTTGAGTTCTTCCAAAAGAAATAGAACTTGGCATAAACTCTTCTTGTTGCTCTGTATCAGGTTCTTTAAGATGCCTTGATAACAAGTCCGTACTGCATCTTGGCTATGACATGTCGCTACGTCTCTTGTTATCTGTTTATTGGGTTGAATCCATGTACTTCATAGGTTTCTGTAATTTGCGTTCTGATGTGGACCTGCATTTGTACTCTTCCTAAGTTCCTATCTGACGAACGAATAGAGTCCTTAAAAGTTTTTAACATATATCTCTTTCCTGAAATGGGAGGGCAAGTGGAAAAGACTTCCATTTGTTGGACTGAAGATAGACTGTACGCGCCAAAACATTTTCAATTAACTCAGATGAGTTGAAGTCCAATTTCCGTCCACAGTCAATTTAGGTACTAGCTATTTATTTGGTTGTAATCCTTCGCTGATGAAAAATGCTTACTTAGAAAGGTTGTAATCCTTCGATGAAAAATCCTTCGCTGATGGAAAAGACTTCCATTTGTTGGACTGAAGATAGACTGTACGCGCCAAAACATTTTCAATTAACTCAGATGAGTTGAAGTCCAATTTCCGTCCACAGTCAATTTAGGTACTAGCTATTTATTTGGTTGTAATCCTTCGCTGATGAAAAATGCTTACTTAGAAAGGAGACAAAATATGGAGTTTTGGTTAGCTGGTTAGGGAAGGGAAAAGTCTGAAGCATAACGTTGGCCTTGTTATGCGTTTTGGAAGATCAGACTTCCACAGAGGTTATAATGTAAATTAATTGTGTGTACCATATGAAAAGATTTTTTTCAATGGGAAACGGTAAAACTGGATTGCATTTGCAATGTTTCAAAGATGTGTTGTGCTATGAGTACTGCCTCCGTCCAGCAATCTTGACGCCGTTTTGCAAAAAAAACATGGTCATTGATGTGGGATTGAGAATGGCATGTCATCAAATATCACTGTCATTAGAGATTTAAGTATGATATGTGTTTCTAAATGTCAAGGAGATATCCTTTCCTCTATTATTTATTTGTTTCTCGAAGAAAAGAGGTGTTTTCAGAACTCCCCCCCCCCCCTCGCGCCCCAAAAAAACTGCGACAAGACCTTTTACTAAGCCATCTTCAACTGATTGTTGTGGTCCATTTGCTGCAGCTTCAGGATGAAGTGATTGTTGCAGATGCGGAGAGATTGCGGATGACGCAAGGGAACGTGAAGACGGTACTGTTTACCTCTGTCTGCCCATGTTCATGTAATCATGTTTCTGTGATAATTTGTTGTGAATATTTGACCTTCTTTTTGGGTAACATTATTCTATTTTACGCAGCTTCAAAGGCATTTTCAAGCTGACACTCTACCTCGCATCGAGAGATTGAAGCAGAAAGAGCAAGGTCTGCAAAGGCGTTTATTAAGGGTGGGTTTGATTTCTGTTGTTGTTGTTGATGTTTCGGGGGGTGGGAGGAGGAGGGGGAAACATGGTTTTCTGCTTTTGTGTATGCTTATTGCTTGGAGAAGCTTTTATTTGTTTTCATGGTCTATTCTTTTAGCTAAATTATATGTTGTTGGTGCTAGTTATATAATTCACATCTGAAGAAACATATGTCTAGGCTCCAAATTTCTGCTGCCTCTATTAAATATCATTTATTAGCAACTATCATTGACTATTATAGCCAGCAACAATCTGTATAGGAAAATATCCTCTGTGCTGAAACTCCTGTATGCTTGTTAGGTGATGAGAATTGTGGAGGCGCTTGAGGGAAAAGGTTGCCGTTTGCCCCTTATGAAAGCGGAAGTTGAATTGGCGGAAAAGTTGGCTGGCACAGTAAGACAGGTTTGTGTATTGCCACCCCTCCAAATATTTTTTTTTGTTGTTTTTTTTTTGAGGTGGATTTTGTCTGATGTATTTCATCTGCAGCTCAAAGGGTCTGGCGCAGAACTTTCAAGGAGGGTACAAAACCTGCTGACCGTATCTCGTGTTCAGGTGAATACCAACGGTGGTAGCATCTCTGTATACCTTCCAGGGTCAACAAAAATTCAAGAGAGGAGTCTCACGGACATGCAGGAGGTGAGAACACAAATGATTTCTTCTTTGCTGGAGCTTATATTTCTCTTAGGTGGCGTTCCTACTGATCTATGAAGCATTTTCTCTTTCTTATCCCTGAATTTATTAAATATTCACAGAAGACGCAAATGACCCTAGTTTCCTTTTGGTTCCAACCCTTAAGCTTTTATGGACGTCTTAAAATGGTCTATGCAGTCAACCTCATCCTATTAGGATTAAAGTTTTGACATTGTTGTTGTTTTTAGAATGGTTTAAGGCTGCTATTTGCAAAAAATGGTGATGTGAAGATTTTTTTTCTTGATAAGTTTTGGGATTAAATGGCAAGTCATAACAAGGTTGTAGACCAACAAAAGAGAGCTTTTGACAAGCATTGGGGTCTTGAAGTGAATGATATTCCTACATTGTGTGGTTGATTATGTGTGAGTTTGGTGGAGATGCATGAGACATGGATGCCAAAATGATTTGTTAAGCCAAGCTGAAGTTAGGAACTTTGGAGAACCAAAAATTGTTATACAATTGTGAAGTTGATGAAGGAGATGTCAAAAGCAAATATCTTATAGGAGAGGAATTGGTTAGATGTAAGATACCCAAGATATCAGAGGTGAACCGTGAACTTCTGATCTTAGTTTGATGAGAATGGGACTATGGTAGTAACAACATTTGAATCCCCTAATGTAATATAGATGACGACCGGGAATGTGGGTGTGTGTGTGTTTGTTTGGGGGTGGGTGGGGGTGGGGGGTTATCTTAAGAAGTCATGTCTTGATCAATGAGAAGTTTTGTTGCTAAACTTGAAGGTCAGTGAGATCAATAAAGAAAAATGTAGGGCTTTGGACTATGTAAACCAAAAGTTATAAGGTTGATATGCGCGGAACGTTATGTCTTGCTTTACGGGGGTTAAATGATTTGAGGTGCCTTAGGATTTATAAAGGTGAAGAGTGGATCTAGGCCTATATTGGTAAGAGTAAGACGGACTGTAGCAGCCGTTAAGTCACCAAATGAAGAGAGACTTTTTGAGATTATAACTAGGGCTGTCAAATCGGGTCATCGGCCGGATATAATTGGTTCGGGTATAATCGGATAATGTAATTGTGCGGGGTCACTGTGCTTATGCGGATTGAATCGGGTCACTTGTGTTTTTGTCAGAAATCCGTTGGATCGGGTCAGCTTTTGATAGCTCTAATTAAAACCATGCTTTTATTGGGTTAAGGGATGACATTTTTGCTCTTAAGATGATTATTCTCTCATCCTAAACCTCAATAGATATCTCTCAATTTCATGACCTTTTTCCTTCACATGTTTTATTGATTTTGCAGGTTCTACAGCAGCAGACTGATGCCATAGCGAGACTTGGCAATGTATTGAAGAGAGACATTCGGGACATGGAGATTATAATGGCTGAAGATACTGAAATGATTGACAATGGTAATTAATACTGCAGATATTGTAACTTACTTTTGTTCTTTTTTGGACAGAATATTGTAACTTTATATAATAGAGTATGATATTGGGTTTGTAGCTTGAGTGTAGAGTAAACTGAAGTTATAGTAGAATTGCTCTTCTATGAATATCGAAAGAGCTATTGCATATAATCATATATGCACATGTGATGTAACCACCTGCCTTAACTAGGATTCTTGAATGAACTATCACATTACCATTAATCCTTAAACGTCCTGACTAATTACCTAAC

mRNA sequence

ATGTTCGATGTAATCAATGTGTGTATCATGTATTATGACTTAACCCTTTCGATCTTTGCTTTGGATCAGAAAACCCTTCTTCCCCAAAACCCCCAAAAGTCATTTCCCAAATTTCCACTCTCTTCTCCCCTCTCTCTAATCTCCGCCAAAATGTTCGGAGCATCTAATTCCGGCTTCGGAACTCCGTCGTTCGGAACACCGTCGTCAACCTCGGCGTTCGGAACTCCCTCGACAACCCCAGCTTTCGGAGCGGCTCCGTCGACGCCAGGTTTCGGCACTCCATCATCGCCTTTTCTCGGATCTTCTATCTTCAATACTCCCTCTCCTTTCGCACAGAATACTCAGCAGCAGCAGCAAACGACGCCGTTTTCGCAGCAGCCGAGTACCGGATTCGGCTTCAATTCGACTTTGTTTCAATCTCCACTTCAACAACAGCAACAGCAACAACAGCCGCAGCAAATGACGCCGTTCAATCTTTCCGGTGTTCAGCAGCTCACCACTCAAATGGCTCCTGTCGCTCCATTACCTTTTTCCCTTGCCGAGCGTGACATTCAGACTATTGTTGATGCTTACAAGGACGAACCTGGAAATACGAAGTATGCATTTAAGCATTTGCTATTCAGTGTGATGGATCCGCAATTAAAGGTTAAGCCACCTGGGGTATCAGATATAATGTGGGCTGAGGCGATGGGAAAACTTGAGGGCATGGACAGTACAAATCGGGAGCGCTTATGGCCTCAACTTGTACAAGGGTTCAAAGATCTCTCAAATCGTTTGAAGCTTCAGGATGAAGTGATTGTTGCAGATGCGGAGAGATTGCGGATGACGCAAGGGAACGTGAAGACGCTTCAAAGGCATTTTCAAGCTGACACTCTACCTCGCATCGAGAGATTGAAGCAGAAAGAGCAAGGTCTGCAAAGGCGTTTATTAAGGGTGATGAGAATTGTGGAGGCGCTTGAGGGAAAAGGTTGCCGTTTGCCCCTTATGAAAGCGGAAGTTGAATTGGCGGAAAAGTTGGCTGGCACAGTAAGACAGCTCAAAGGGTCTGGCGCAGAACTTTCAAGGAGGGTACAAAACCTGCTGACCGTATCTCGTGTTCAGGTGAATACCAACGGTGGTAGCATCTCTGTATACCTTCCAGGGTCAACAAAAATTCAAGAGAGGAGTCTCACGGACATGCAGGAGGTTCTACAGCAGCAGACTGATGCCATAGCGAGACTTGGCAATGTATTGAAGAGAGACATTCGGGACATGGAGATTATAATGGCTGAAGATACTGAAATGATTGACAATGGTAATTAATACTGCAGATATTGTAACTTACTTTTGTTCTTTTTTGGACAGAATATTGTAACTTTATATAATAGAGTATGATATTGGGTTTGTAGCTTGAGTGTAGAGTAAACTGAAGTTATAGTAGAATTGCTCTTCTATGAATATCGAAAGAGCTATTGCATATAATCATATATGCACATGTGATGTAACCACCTGCCTTAACTAGGATTCTTGAATGAACTATCACATTACCATTAATCCTTAAACGTCCTGACTAATTACCTAAC

Coding sequence (CDS)

ATGTTCGATGTAATCAATGTGTGTATCATGTATTATGACTTAACCCTTTCGATCTTTGCTTTGGATCAGAAAACCCTTCTTCCCCAAAACCCCCAAAAGTCATTTCCCAAATTTCCACTCTCTTCTCCCCTCTCTCTAATCTCCGCCAAAATGTTCGGAGCATCTAATTCCGGCTTCGGAACTCCGTCGTTCGGAACACCGTCGTCAACCTCGGCGTTCGGAACTCCCTCGACAACCCCAGCTTTCGGAGCGGCTCCGTCGACGCCAGGTTTCGGCACTCCATCATCGCCTTTTCTCGGATCTTCTATCTTCAATACTCCCTCTCCTTTCGCACAGAATACTCAGCAGCAGCAGCAAACGACGCCGTTTTCGCAGCAGCCGAGTACCGGATTCGGCTTCAATTCGACTTTGTTTCAATCTCCACTTCAACAACAGCAACAGCAACAACAGCCGCAGCAAATGACGCCGTTCAATCTTTCCGGTGTTCAGCAGCTCACCACTCAAATGGCTCCTGTCGCTCCATTACCTTTTTCCCTTGCCGAGCGTGACATTCAGACTATTGTTGATGCTTACAAGGACGAACCTGGAAATACGAAGTATGCATTTAAGCATTTGCTATTCAGTGTGATGGATCCGCAATTAAAGGTTAAGCCACCTGGGGTATCAGATATAATGTGGGCTGAGGCGATGGGAAAACTTGAGGGCATGGACAGTACAAATCGGGAGCGCTTATGGCCTCAACTTGTACAAGGGTTCAAAGATCTCTCAAATCGTTTGAAGCTTCAGGATGAAGTGATTGTTGCAGATGCGGAGAGATTGCGGATGACGCAAGGGAACGTGAAGACGCTTCAAAGGCATTTTCAAGCTGACACTCTACCTCGCATCGAGAGATTGAAGCAGAAAGAGCAAGGTCTGCAAAGGCGTTTATTAAGGGTGATGAGAATTGTGGAGGCGCTTGAGGGAAAAGGTTGCCGTTTGCCCCTTATGAAAGCGGAAGTTGAATTGGCGGAAAAGTTGGCTGGCACAGTAAGACAGCTCAAAGGGTCTGGCGCAGAACTTTCAAGGAGGGTACAAAACCTGCTGACCGTATCTCGTGTTCAGGTGAATACCAACGGTGGTAGCATCTCTGTATACCTTCCAGGGTCAACAAAAATTCAAGAGAGGAGTCTCACGGACATGCAGGAGGTTCTACAGCAGCAGACTGATGCCATAGCGAGACTTGGCAATGTATTGAAGAGAGACATTCGGGACATGGAGATTATAATGGCTGAAGATACTGAAATGATTGACAATGGTAATTAA

Protein sequence

MFDVINVCIMYYDLTLSIFALDQKTLLPQNPQKSFPKFPLSSPLSLISAKMFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFLGSSIFNTPSPFAQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNLSGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQQTDAIARLGNVLKRDIRDMEIIMAEDTEMIDNGN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo05992	Spo05992	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo05992.1	Spo05992.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05992.1.exon.1	Spo05992.1.exon.1	exon
Spo05992.1.exon.2	Spo05992.1.exon.2	exon
Spo05992.1.exon.3	Spo05992.1.exon.3	exon
Spo05992.1.exon.4	Spo05992.1.exon.4	exon
Spo05992.1.exon.5	Spo05992.1.exon.5	exon
Spo05992.1.exon.6	Spo05992.1.exon.6	exon
Spo05992.1.exon.7	Spo05992.1.exon.7	exon
Spo05992.1.exon.8	Spo05992.1.exon.8	exon
Spo05992.1.exon.9	Spo05992.1.exon.9	exon
Spo05992.1.exon.10	Spo05992.1.exon.10	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05992.1.CDS.1	Spo05992.1.CDS.1	CDS
Spo05992.1.CDS.2	Spo05992.1.CDS.2	CDS
Spo05992.1.CDS.3	Spo05992.1.CDS.3	CDS
Spo05992.1.CDS.4	Spo05992.1.CDS.4	CDS
Spo05992.1.CDS.5	Spo05992.1.CDS.5	CDS
Spo05992.1.CDS.6	Spo05992.1.CDS.6	CDS
Spo05992.1.CDS.7	Spo05992.1.CDS.7	CDS
Spo05992.1.CDS.8	Spo05992.1.CDS.8	CDS
Spo05992.1.CDS.9	Spo05992.1.CDS.9	CDS
Spo05992.1.CDS.10	Spo05992.1.CDS.10	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo05992.1.utr3p.1	Spo05992.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo05992.1 vs. NCBI nr
Match: gi|902237167|gb|KNA24677.1| (hypothetical protein SOVF_013630 [Spinacia oleracea])

HSP 1 Score: 726.1 bits (1873), Expect = 3.600e-206
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 1


		  
Query: 51  MFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFLGSSIFNTPSPF 110
           MFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFLGSSIFNTPSPF
Sbjct: 1   MFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFLGSSIFNTPSPF 60

Query: 111 AQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNLSGVQQLTTQMA 170
           AQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNLSGVQQLTTQMA
Sbjct: 61  AQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNLSGVQQLTTQMA 120

Query: 171 PVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPPGVSDIMWAEAM 230
           PVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPPGVSDIMWAEAM
Sbjct: 121 PVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPPGVSDIMWAEAM 180

Query: 231 GKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGNVKTLQRHFQAD 290
           GKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGNVKTLQRHFQAD
Sbjct: 181 GKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGNVKTLQRHFQAD 240

Query: 291 TLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKLAGTVRQLKGSG 350
           TLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKLAGTVRQLKGSG
Sbjct: 241 TLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKLAGTVRQLKGSG 300

Query: 351 AELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQQTDAIARLGNV 410
           AELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQQTDAIARLGNV
Sbjct: 301 AELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQQTDAIARLGNV 360

Query: 411 LKRDIRDMEIIMAEDTEMIDNGN 434
           LKRDIRDMEIIMAEDTEMIDNGN
Sbjct: 361 LKRDIRDMEIIMAEDTEMIDNGN 383

[Close]

BLAST of Spo05992.1 vs. NCBI nr
Match: gi|731343246|ref|XP_010682798.1| (PREDICTED: nuclear pore complex protein NUP54 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 610.9 bits (1574), Expect = 1.700e-171
Identity = 333/398 (83.67%), Postives = 349/398 (87.69%), Query Frame = 1


		  
Query: 51  MFGASNSGFGTPS-------------FGTPSSTSAFGTPSTTPAFGAAP--STPGFGTPS 110
           MFGAS+S FGTPS             FGTPSS+ AFGTPS  PAFGAA   STPGFGTPS
Sbjct: 1   MFGASSSAFGTPSSTPAFGTPSSTPAFGTPSSSPAFGTPSVAPAFGAATPSSTPGFGTPS 60

Query: 111 SPFLGSSIFNTPSPFAQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMT 170
           SPF  SS+F TPSPFAQNTQQQQQ     QQ + GFGFN+T F +PLQQQQQQQQPQQMT
Sbjct: 61  SPFPSSSLFATPSPFAQNTQQQQQQISPFQQQNAGFGFNTTPFSTPLQQQQQQQQPQQMT 120

Query: 171 PFNLSGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLK 230
           PF+LSGVQQLTTQMAPVAPLPFSLAERDIQ  VD+YKDEPGN KYAFKHLLFSV DPQ++
Sbjct: 121 PFSLSGVQQLTTQMAPVAPLPFSLAERDIQATVDSYKDEPGNPKYAFKHLLFSVTDPQIR 180

Query: 231 VKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRM 290
           VKP GVSDIMWAEAM KLEGMDSTNRERLWP+LV+GFKDLSNRLKLQDEVIV+DAERLR 
Sbjct: 181 VKPAGVSDIMWAEAMRKLEGMDSTNRERLWPELVKGFKDLSNRLKLQDEVIVSDAERLRT 240

Query: 291 TQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVEL 350
           TQ N K LQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMK EVEL
Sbjct: 241 TQSNAKMLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKGEVEL 300

Query: 351 AEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQE 410
           AEKLA  VRQLKGSGAELSRRVQNLLTVSRVQVN NGGSISVYLPGSTKI ERSL DMQE
Sbjct: 301 AEKLAAVVRQLKGSGAELSRRVQNLLTVSRVQVNANGGSISVYLPGSTKIHERSLADMQE 360

Query: 411 VLQQQTDAIARLGNVLKRDIRDMEIIMAEDTEMIDNGN 434
           VLQQQTDAIARLGNVLKRDIRDMEIIM+ED EMI+NG+
Sbjct: 361 VLQQQTDAIARLGNVLKRDIRDMEIIMSEDIEMIENGS 398

[Close]

BLAST of Spo05992.1 vs. NCBI nr
Match: gi|255547750|ref|XP_002514932.1| (PREDICTED: nuclear pore complex protein NUP54 [Ricinus communis])

HSP 1 Score: 498.4 bits (1282), Expect = 1.200e-137
Identity = 290/408 (71.08%), Postives = 320/408 (78.43%), Query Frame = 1


		  
Query: 32  QKSFPKF--PLSSPLSLISAKMFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTP 91
           Q S P F  P S+P       +FG  +S   TPSFGTPSST AFGTPS+TPAFG   STP
Sbjct: 5   QSSNPAFGTPSSTP------SLFGTPSS---TPSFGTPSSTPAFGTPSSTPAFGTPSSTP 64

Query: 92  GFGTPSSPFL-----GSSIFNTP-SPFAQNTQQQQQTTPF--SQQPSTGFGFNS-TLFQS 151
            FGTPS+P       GSS+F+TP S   Q  QQQQQ TPF   Q PS G GF + TLF +
Sbjct: 65  AFGTPSTPSFAAGGFGSSLFSTPFSAQTQQQQQQQQQTPFFSQQTPSIGLGFQTGTLFTA 124

Query: 152 PLQQQQQQQQPQQMTPFNLSGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKY 211
                      Q  TPF  +   QLTTQMAPVAPLPFSL +RDIQ IVDAYK++PGN KY
Sbjct: 125 N----------QTTTPFPNT---QLTTQMAPVAPLPFSLCDRDIQAIVDAYKEDPGNPKY 184

Query: 212 AFKHLLFSVMDPQLKVKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLK 271
           AFK+LLFSV DPQ +VKP GVSDIMWAEAM KLEGM+S++RERLWPQLVQGFKDLSNRLK
Sbjct: 185 AFKYLLFSVTDPQHRVKPAGVSDIMWAEAMAKLEGMESSDRERLWPQLVQGFKDLSNRLK 244

Query: 272 LQDEVIVADAERLRMTQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALE 331
           LQDEVIV+DAERLRMTQ NVK LQRHFQA+TLPRIER++QKEQ LQRRLLR+MRI+EALE
Sbjct: 245 LQDEVIVSDAERLRMTQSNVKMLQRHFQAETLPRIERMRQKEQSLQRRLLRIMRIMEALE 304

Query: 332 GKGCRLPLMKAEVELAEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLP 391
           GKG R+PLMK E ELAEKLA   RQLKGSGAELSRRVQNLLTVSR+Q N  G   S+YLP
Sbjct: 305 GKGYRMPLMKGETELAEKLAAITRQLKGSGAELSRRVQNLLTVSRIQANALGAGGSIYLP 364

Query: 392 GSTKIQERSLTDMQEVLQQQTDAIARLGNVLKRDIRDMEIIMAEDTEM 429
           GSTKI E+SL DMQEVLQQQT+AIARLGNVLKRD+RDMEIIMAEDTEM
Sbjct: 365 GSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDMRDMEIIMAEDTEM 390

[Close]

BLAST of Spo05992.1 vs. NCBI nr
Match: gi|694393760|ref|XP_009372307.1| (PREDICTED: uncharacterized protein LOC103961479 [Pyrus x bretschneideri])

HSP 1 Score: 498.4 bits (1282), Expect = 1.200e-137
Identity = 291/407 (71.50%), Postives = 314/407 (77.15%), Query Frame = 1


		  
Query: 51  MFGA--SNSGFGTPS----FGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPS--------- 110
           MFGA  S+S FGTPS    FGTPSST AFGTPS+TPAFG   STP FGTPS         
Sbjct: 1   MFGAQSSSSPFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSFFTPSTPAF 60

Query: 111 -----SPF----LGSSIFNTPSPFAQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQ 170
                S F     G S+FNTP       QQQQQ TP  QQP +  GF    FQ+P     
Sbjct: 61  GTPSTSAFSAGGFGGSLFNTPFSSQTQQQQQQQQTPSFQQPQSAGGFG---FQAPFSA-- 120

Query: 171 QQQQPQQMTPFNLSGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLL 230
               PQQ TPF  S   QLTTQMAPVAPLPFSLA+RDIQ IVDAYKDEPGN KYAFKHLL
Sbjct: 121 ----PQQPTPFPNS---QLTTQMAPVAPLPFSLADRDIQAIVDAYKDEPGNPKYAFKHLL 180

Query: 231 FSVMDPQLKVKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVI 290
           FSV DPQ +VKP GVSDIMWAEAM KLEG++ST+RERLWPQLVQGFKDLS RLKLQDEV+
Sbjct: 181 FSVTDPQFRVKPAGVSDIMWAEAMAKLEGLESTDRERLWPQLVQGFKDLSQRLKLQDEVL 240

Query: 291 VADAERLRMTQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRL 350
           ++DAERL+MTQ NVK LQRHFQADTLP IER++QKEQGLQRRLLRVMRI+EALEGKG RL
Sbjct: 241 LSDAERLQMTQSNVKMLQRHFQADTLPWIERMRQKEQGLQRRLLRVMRILEALEGKGFRL 300

Query: 351 PLMKAEVELAEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQ 410
           PLMK EVELAEKLA   RQLKGSGAELSRRVQNLLT+SRVQ N+ GG    YLPGSTKI 
Sbjct: 301 PLMKGEVELAEKLAAVTRQLKGSGAELSRRVQNLLTISRVQENSIGGGGLGYLPGSTKIH 360

Query: 411 ERSLTDMQEVLQQQTDAIARLGNVLKRDIRDMEIIMAEDTEMIDNGN 434
           E+SL  MQEVLQQQT+AIARLGNV+KRDIRDMEIIMAED E   NG+
Sbjct: 361 EQSLAAMQEVLQQQTEAIARLGNVVKRDIRDMEIIMAEDMETTQNGS 395

[Close]

BLAST of Spo05992.1 vs. NCBI nr
Match: gi|743896479|ref|XP_011041512.1| (PREDICTED: nuclear pore complex protein NUP54 [Populus euphratica])

HSP 1 Score: 498.0 bits (1281), Expect = 1.600e-137
Identity = 292/401 (72.82%), Postives = 314/401 (78.30%), Query Frame = 1


		  
Query: 51  MFGASNS--GFGTPS-------------FGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPS 110
           MFG  +S  GFGTPS             FGTPSST AFGTPS+TPAFG   STP FGTPS
Sbjct: 1   MFGTPSSTPGFGTPSSTPAFGTPSSTPLFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPS 60

Query: 111 SPFL-----GSSIFNTP-SPFAQNTQQQQQTTPFSQQPS-TGFGFNSTLFQSPLQQQQQQ 170
           +P       GSS+F+TP +   Q  QQQQQ TPF QQPS TGFGF         QQQQQQ
Sbjct: 61  TPAFASGGFGSSLFSTPFTSQTQQQQQQQQQTPFFQQPSATGFGF---------QQQQQQ 120

Query: 171 QQ---PQQMTPFNLSGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHL 230
                P QMTPF      QLTTQMAPVAPLPFSLA+RDIQ IVDAYK+EPGN KYAFK+L
Sbjct: 121 TPFATPLQMTPFP---TPQLTTQMAPVAPLPFSLADRDIQAIVDAYKEEPGNPKYAFKYL 180

Query: 231 LFSVMDPQLKVKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEV 290
           L SV DPQ ++KP GVS+IMWAEAM KLEGMDS +RERLWPQLVQGFKDLSNRLKLQDEV
Sbjct: 181 LLSVTDPQHRLKPAGVSEIMWAEAMAKLEGMDSADRERLWPQLVQGFKDLSNRLKLQDEV 240

Query: 291 IVADAERLRMTQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCR 350
           IV+DAERLRMTQ NVK LQRHFQA+TLP IER++QKEQ LQRRLLRVMRI+EALEGKGCR
Sbjct: 241 IVSDAERLRMTQSNVKMLQRHFQAETLPWIERMRQKEQSLQRRLLRVMRIMEALEGKGCR 300

Query: 351 LPLMKAEVELAEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKI 410
           LPL K E ELAEKL   +RQLKGSGAE SRRV NLLTVSRVQ N  G   S+YLPGSTKI
Sbjct: 301 LPLTKGEAELAEKLVVIIRQLKGSGAEFSRRVHNLLTVSRVQANGIGAGGSLYLPGSTKI 360

Query: 411 QERSLTDMQEVLQQQTDAIARLGNVLKRDIRDMEIIMAEDT 427
           QE SL DMQEVLQQQT+AIARLGNVLKRDIRDMEI+MAEDT
Sbjct: 361 QEESLADMQEVLQQQTEAIARLGNVLKRDIRDMEIMMAEDT 389

[Close]

BLAST of Spo05992.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0P3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_013630 PE=4 SV=1)

HSP 1 Score: 726.1 bits (1873), Expect = 2.500e-206
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 1


		  
Query: 51  MFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFLGSSIFNTPSPF 110
           MFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFLGSSIFNTPSPF
Sbjct: 1   MFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFLGSSIFNTPSPF 60

Query: 111 AQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNLSGVQQLTTQMA 170
           AQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNLSGVQQLTTQMA
Sbjct: 61  AQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNLSGVQQLTTQMA 120

Query: 171 PVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPPGVSDIMWAEAM 230
           PVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPPGVSDIMWAEAM
Sbjct: 121 PVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPPGVSDIMWAEAM 180

Query: 231 GKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGNVKTLQRHFQAD 290
           GKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGNVKTLQRHFQAD
Sbjct: 181 GKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGNVKTLQRHFQAD 240

Query: 291 TLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKLAGTVRQLKGSG 350
           TLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKLAGTVRQLKGSG
Sbjct: 241 TLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKLAGTVRQLKGSG 300

Query: 351 AELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQQTDAIARLGNV 410
           AELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQQTDAIARLGNV
Sbjct: 301 AELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQQTDAIARLGNV 360

Query: 411 LKRDIRDMEIIMAEDTEMIDNGN 434
           LKRDIRDMEIIMAEDTEMIDNGN
Sbjct: 361 LKRDIRDMEIIMAEDTEMIDNGN 383

[Close]

BLAST of Spo05992.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C5F9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g151010 PE=4 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 1.200e-171
Identity = 333/398 (83.67%), Postives = 349/398 (87.69%), Query Frame = 1


		  
Query: 51  MFGASNSGFGTPS-------------FGTPSSTSAFGTPSTTPAFGAAP--STPGFGTPS 110
           MFGAS+S FGTPS             FGTPSS+ AFGTPS  PAFGAA   STPGFGTPS
Sbjct: 1   MFGASSSAFGTPSSTPAFGTPSSTPAFGTPSSSPAFGTPSVAPAFGAATPSSTPGFGTPS 60

Query: 111 SPFLGSSIFNTPSPFAQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMT 170
           SPF  SS+F TPSPFAQNTQQQQQ     QQ + GFGFN+T F +PLQQQQQQQQPQQMT
Sbjct: 61  SPFPSSSLFATPSPFAQNTQQQQQQISPFQQQNAGFGFNTTPFSTPLQQQQQQQQPQQMT 120

Query: 171 PFNLSGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLK 230
           PF+LSGVQQLTTQMAPVAPLPFSLAERDIQ  VD+YKDEPGN KYAFKHLLFSV DPQ++
Sbjct: 121 PFSLSGVQQLTTQMAPVAPLPFSLAERDIQATVDSYKDEPGNPKYAFKHLLFSVTDPQIR 180

Query: 231 VKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRM 290
           VKP GVSDIMWAEAM KLEGMDSTNRERLWP+LV+GFKDLSNRLKLQDEVIV+DAERLR 
Sbjct: 181 VKPAGVSDIMWAEAMRKLEGMDSTNRERLWPELVKGFKDLSNRLKLQDEVIVSDAERLRT 240

Query: 291 TQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVEL 350
           TQ N K LQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMK EVEL
Sbjct: 241 TQSNAKMLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKGEVEL 300

Query: 351 AEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQE 410
           AEKLA  VRQLKGSGAELSRRVQNLLTVSRVQVN NGGSISVYLPGSTKI ERSL DMQE
Sbjct: 301 AEKLAAVVRQLKGSGAELSRRVQNLLTVSRVQVNANGGSISVYLPGSTKIHERSLADMQE 360

Query: 411 VLQQQTDAIARLGNVLKRDIRDMEIIMAEDTEMIDNGN 434
           VLQQQTDAIARLGNVLKRDIRDMEIIM+ED EMI+NG+
Sbjct: 361 VLQQQTDAIARLGNVLKRDIRDMEIIMSEDIEMIENGS 398

[Close]

BLAST of Spo05992.1 vs. UniProtKB/TrEMBL
Match: B9RMG3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1080750 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 8.600e-138
Identity = 290/408 (71.08%), Postives = 320/408 (78.43%), Query Frame = 1


		  
Query: 32  QKSFPKF--PLSSPLSLISAKMFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTP 91
           Q S P F  P S+P       +FG  +S   TPSFGTPSST AFGTPS+TPAFG   STP
Sbjct: 5   QSSNPAFGTPSSTP------SLFGTPSS---TPSFGTPSSTPAFGTPSSTPAFGTPSSTP 64

Query: 92  GFGTPSSPFL-----GSSIFNTP-SPFAQNTQQQQQTTPF--SQQPSTGFGFNS-TLFQS 151
            FGTPS+P       GSS+F+TP S   Q  QQQQQ TPF   Q PS G GF + TLF +
Sbjct: 65  AFGTPSTPSFAAGGFGSSLFSTPFSAQTQQQQQQQQQTPFFSQQTPSIGLGFQTGTLFTA 124

Query: 152 PLQQQQQQQQPQQMTPFNLSGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKY 211
                      Q  TPF  +   QLTTQMAPVAPLPFSL +RDIQ IVDAYK++PGN KY
Sbjct: 125 N----------QTTTPFPNT---QLTTQMAPVAPLPFSLCDRDIQAIVDAYKEDPGNPKY 184

Query: 212 AFKHLLFSVMDPQLKVKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLK 271
           AFK+LLFSV DPQ +VKP GVSDIMWAEAM KLEGM+S++RERLWPQLVQGFKDLSNRLK
Sbjct: 185 AFKYLLFSVTDPQHRVKPAGVSDIMWAEAMAKLEGMESSDRERLWPQLVQGFKDLSNRLK 244

Query: 272 LQDEVIVADAERLRMTQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALE 331
           LQDEVIV+DAERLRMTQ NVK LQRHFQA+TLPRIER++QKEQ LQRRLLR+MRI+EALE
Sbjct: 245 LQDEVIVSDAERLRMTQSNVKMLQRHFQAETLPRIERMRQKEQSLQRRLLRIMRIMEALE 304

Query: 332 GKGCRLPLMKAEVELAEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLP 391
           GKG R+PLMK E ELAEKLA   RQLKGSGAELSRRVQNLLTVSR+Q N  G   S+YLP
Sbjct: 305 GKGYRMPLMKGETELAEKLAAITRQLKGSGAELSRRVQNLLTVSRIQANALGAGGSIYLP 364

Query: 392 GSTKIQERSLTDMQEVLQQQTDAIARLGNVLKRDIRDMEIIMAEDTEM 429
           GSTKI E+SL DMQEVLQQQT+AIARLGNVLKRD+RDMEIIMAEDTEM
Sbjct: 365 GSTKIHEQSLADMQEVLQQQTEAIARLGNVLKRDMRDMEIIMAEDTEM 390

[Close]

BLAST of Spo05992.1 vs. UniProtKB/TrEMBL
Match: M5XYB4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006918mg PE=4 SV=1)

HSP 1 Score: 496.9 bits (1278), Expect = 2.500e-137
Identity = 288/397 (72.54%), Postives = 315/397 (79.35%), Query Frame = 1


		  
Query: 41  SSPLSLISA-KMFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFL 100
           SSP  L S+  +FG  +S   TP+FGTPSST AFGTPS+TP+F   PSTP FGTPSS   
Sbjct: 8   SSPFGLSSSTSVFGTPSS---TPAFGTPSSTPAFGTPSSTPSF-FTPSTPAFGTPSSSSF 67

Query: 101 -----GSSIFNTPSPFAQNTQQQQQTTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQM 160
                G S F TP  F+  TQQQQQ TP  QQP +  GF    FQSP         PQQ 
Sbjct: 68  STGGFGGSFFATP--FSSQTQQQQQQTPSFQQPQSAGGFG---FQSPFTT------PQQP 127

Query: 161 TPFNLSGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQL 220
           TPF  S   QLTTQMAPVAPLPFSLA+RDIQ IVDAYKDEPGN KYAFKHLLFSV DPQ 
Sbjct: 128 TPFPNS---QLTTQMAPVAPLPFSLADRDIQAIVDAYKDEPGNPKYAFKHLLFSVTDPQF 187

Query: 221 KVKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLR 280
           +VKP GVSDIMWAEAMGKLEG++ST+RERLWPQLVQGFKDLS RLKLQDEV+++DAERL+
Sbjct: 188 RVKPAGVSDIMWAEAMGKLEGLESTDRERLWPQLVQGFKDLSQRLKLQDEVLLSDAERLQ 247

Query: 281 MTQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVE 340
           MTQ NVK LQRHFQADTLP IER++QKEQGLQRRLLRVMR++EALEGKG RLPLMK E E
Sbjct: 248 MTQSNVKMLQRHFQADTLPWIERMRQKEQGLQRRLLRVMRLLEALEGKGFRLPLMKGEAE 307

Query: 341 LAEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQ 400
           LAEKLA   RQLKGSGAELSRRVQNL+T+SRVQ N  G    V LPGSTKI E+SL DMQ
Sbjct: 308 LAEKLAAITRQLKGSGAELSRRVQNLVTISRVQENAIGAGGLVCLPGSTKIHEQSLADMQ 367

Query: 401 EVLQQQTDAIARLGNVLKRDIRDMEIIMAEDTEMIDN 432
           EVLQQQT+AIARLGNVLKRDIRDMEIIMAE+TE  +N
Sbjct: 368 EVLQQQTEAIARLGNVLKRDIRDMEIIMAEETETTEN 386

[Close]

BLAST of Spo05992.1 vs. UniProtKB/TrEMBL
Match: F6HG89_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03310 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 3.300e-137
Identity = 285/393 (72.52%), Postives = 312/393 (79.39%), Query Frame = 1


		  
Query: 51  MFGA-------SNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFLGSSI 110
           MFGA       S S FG+P+FGTPSS SAFGTPS+TP FG  PSTP F +      GSS+
Sbjct: 1   MFGAQPSSAAPSASAFGSPTFGTPSSASAFGTPSSTPVFGT-PSTPSFASG----FGSSL 60

Query: 111 FNTP--SPFAQNTQQQQQTTPFSQQPST-GFGFNSTLFQSPLQQQQQQQQPQQMTPFNLS 170
           F+TP   P  Q   QQQQ TPF QQPS+ GFG+  T F +P           Q TP    
Sbjct: 61  FSTPFSQPQPQPQPQQQQQTPFFQQPSSSGFGYQ-TPFAAP-----------QSTP---- 120

Query: 171 GVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPPG 230
              QLTTQMAPVAPLPFSLA+RD+Q IV+AY+DEPGN KYAFKHLLFSV DPQ +VKP G
Sbjct: 121 -APQLTTQMAPVAPLPFSLADRDVQAIVEAYRDEPGNPKYAFKHLLFSVTDPQFRVKPAG 180

Query: 231 VSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGNV 290
            SDIMWAEAMGKLEGM+S++RERLWPQLVQGFKDLS RLKLQDEVI++DAERLRMTQ NV
Sbjct: 181 ASDIMWAEAMGKLEGMESSDRERLWPQLVQGFKDLSQRLKLQDEVILSDAERLRMTQSNV 240

Query: 291 KTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKLA 350
           K LQRHFQADTLP I+R++QKEQGLQRRLLRVMRIVEALEGKG RLPLMK EVEL EKLA
Sbjct: 241 KLLQRHFQADTLPWIQRMRQKEQGLQRRLLRVMRIVEALEGKGYRLPLMKGEVELVEKLA 300

Query: 351 GTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQQ 410
              RQLKGSGAELSRRVQNLLT+SRVQ N  GG  SVYLPGSTKI E+SL DMQEVLQQQ
Sbjct: 301 AITRQLKGSGAELSRRVQNLLTISRVQANAIGGGGSVYLPGSTKIHEQSLADMQEVLQQQ 360

Query: 411 TDAIARLGNVLKRDIRDMEIIMAEDTEMIDNGN 434
           T+AIARLGNVLKRD RDMEIIM+EDTEM  +GN
Sbjct: 361 TEAIARLGNVLKRDSRDMEIIMSEDTEMTQDGN 371

[Close]

BLAST of Spo05992.1 vs. ExPASy Swiss-Prot
Match: NUP54_ARATH (Nuclear pore complex protein NUP54 OS=Arabidopsis thaliana GN=NUP54 PE=1 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 2.300e-123
Identity = 253/389 (65.04%), Postives = 295/389 (75.84%), Query Frame = 1


		  
Query: 51  MFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFL-----GSSIFN 110
           MFG  +S   +PSFGTPSST AFGT S  PAFG   +TP FGTPS+P       GSS+F+
Sbjct: 1   MFGTPSS---SPSFGTPSSTPAFGTSS--PAFGTPSATPAFGTPSNPSFSSGGFGSSLFS 60

Query: 111 TPSPFAQNTQQQQQ------TTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNL 170
           +P    Q  QQQQQ      ++ F QQPS+ FGF     QSP     QQQQ    TPF  
Sbjct: 61  SPFSSQQPQQQQQQQQQQQPSSLFQQQPSSNFGF-----QSPFNNTAQQQQ---QTPFPN 120

Query: 171 SGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPP 230
           +   QLTTQMAPVAP+P+SLA+RD+Q I++AYK++P N KYAF+HLLFSV +PQ +VKP 
Sbjct: 121 A---QLTTQMAPVAPIPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPA 180

Query: 231 GVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGN 290
            VSDIMWAEAM KLEGMDST RERLWPQLVQGFKDLS RLKLQDEV+V+D +R++ TQ N
Sbjct: 181 AVSDIMWAEAMSKLEGMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSN 240

Query: 291 VKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKL 350
           VK LQRH QA T P IERL+QKEQ LQRR+LRVMRI+E LEGKG RLPL K E EL+EKL
Sbjct: 241 VKMLQRHLQASTFPSIERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKL 300

Query: 351 AGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQ 410
               RQ+KG GAELSRRVQ+L T+SR Q N+     S+YLPGSTKI E+SL DMQEVLQQ
Sbjct: 301 TAITRQVKGPGAELSRRVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQ 360

Query: 411 QTDAIARLGNVLKRDIRDMEIIMAEDTEM 429
           +T+AI RLGNVLKRD+RDMEI++AEDTEM
Sbjct: 361 ETEAIGRLGNVLKRDMRDMEIMVAEDTEM 373

[Close]

BLAST of Spo05992.1 vs. ExPASy Swiss-Prot
Match: NUP54_RAT (Nuclear pore complex protein Nup54 OS=Rattus norvegicus GN=Nup54 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.100e-8
Identity = 54/214 (25.23%), Postives = 107/214 (50.00%), Query Frame = 1


		  
Query: 214 LKVKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERL 273
           L+  P GV  I+W +A      +D+ + E+L P  + GFK+L  RLK+QD++      RL
Sbjct: 300 LQNPPAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRL 359

Query: 274 RMTQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEV 333
            +   ++  LQ++ Q  T+ +I + K+K   L  R L+V+   E     G  +   +AE 
Sbjct: 360 DIISEDISELQKN-QTTTMAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAI---QAEE 419

Query: 334 ELAEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQER----- 393
           E       T++    +  +   R+  L++  R+Q +           G+ K +E+     
Sbjct: 420 EQLRVQLDTIQGELNAPTQFKGRLNELMSQIRMQNHF----------GAVKSEEKYYIDA 479

Query: 394 -SLTDMQEVLQQQTDAIARLGNVLKRDIRDMEII 422
             L ++++ L+QQ + ++ L +++K D+ D++++
Sbjct: 480 DLLREIKQHLKQQQEGLSHLISIIKDDLEDIKLV 494

[Close]

BLAST of Spo05992.1 vs. ExPASy Swiss-Prot
Match: NUP54_HUMAN (Nucleoporin p54 OS=Homo sapiens GN=NUP54 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 3.500e-7
Identity = 52/214 (24.30%), Postives = 107/214 (50.00%), Query Frame = 1


		  
Query: 214 LKVKPPGVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERL 273
           L+  P GV  I+W +A      +D+ + E+L P  + GFK+L  RLK+QD++      RL
Sbjct: 297 LQNPPAGVDPIIWEQAK-----VDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRL 356

Query: 274 RMTQGNVKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEV 333
            +   ++  LQ++ Q  ++ +I + K+K   L  R L+V+   E     G  +   +A+ 
Sbjct: 357 DIISEDISELQKN-QTTSVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAI---QADE 416

Query: 334 ELAEKLAGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQER----- 393
           E       T++    +  +   R+  L++  R+Q +           G+ + +ER     
Sbjct: 417 EQLRVQLDTIQGELNAPTQFKGRLNELMSQIRMQNHF----------GAVRSEERYYIDA 476

Query: 394 -SLTDMQEVLQQQTDAIARLGNVLKRDIRDMEII 422
             L ++++ L+QQ + ++ L +++K D+ D++++
Sbjct: 477 DLLREIKQHLKQQQEGLSHLISIIKDDLEDIKLV 491

[Close]

BLAST of Spo05992.1 vs. TAIR (Arabidopsis)
Match: AT1G24310.1 (unknown protein)

HSP 1 Score: 443.7 bits (1140), Expect = 1.300e-124
Identity = 253/389 (65.04%), Postives = 295/389 (75.84%), Query Frame = 1


		  
Query: 51  MFGASNSGFGTPSFGTPSSTSAFGTPSTTPAFGAAPSTPGFGTPSSPFL-----GSSIFN 110
           MFG  +S   +PSFGTPSST AFGT S  PAFG   +TP FGTPS+P       GSS+F+
Sbjct: 1   MFGTPSS---SPSFGTPSSTPAFGTSS--PAFGTPSATPAFGTPSNPSFSSGGFGSSLFS 60

Query: 111 TPSPFAQNTQQQQQ------TTPFSQQPSTGFGFNSTLFQSPLQQQQQQQQPQQMTPFNL 170
           +P    Q  QQQQQ      ++ F QQPS+ FGF     QSP     QQQQ    TPF  
Sbjct: 61  SPFSSQQPQQQQQQQQQQQPSSLFQQQPSSNFGF-----QSPFNNTAQQQQ---QTPFPN 120

Query: 171 SGVQQLTTQMAPVAPLPFSLAERDIQTIVDAYKDEPGNTKYAFKHLLFSVMDPQLKVKPP 230
           +   QLTTQMAPVAP+P+SLA+RD+Q I++AYK++P N KYAF+HLLFSV +PQ +VKP 
Sbjct: 121 A---QLTTQMAPVAPIPYSLADRDVQAIIEAYKEDPTNPKYAFQHLLFSVTEPQYRVKPA 180

Query: 231 GVSDIMWAEAMGKLEGMDSTNRERLWPQLVQGFKDLSNRLKLQDEVIVADAERLRMTQGN 290
            VSDIMWAEAM KLEGMDST RERLWPQLVQGFKDLS RLKLQDEV+V+D +R++ TQ N
Sbjct: 181 AVSDIMWAEAMSKLEGMDSTERERLWPQLVQGFKDLSQRLKLQDEVLVSDRDRIKTTQSN 240

Query: 291 VKTLQRHFQADTLPRIERLKQKEQGLQRRLLRVMRIVEALEGKGCRLPLMKAEVELAEKL 350
           VK LQRH QA T P IERL+QKEQ LQRR+LRVMRI+E LEGKG RLPL K E EL+EKL
Sbjct: 241 VKMLQRHLQASTFPSIERLRQKEQSLQRRMLRVMRIIEGLEGKGFRLPLTKGEAELSEKL 300

Query: 351 AGTVRQLKGSGAELSRRVQNLLTVSRVQVNTNGGSISVYLPGSTKIQERSLTDMQEVLQQ 410
               RQ+KG GAELSRRVQ+L T+SR Q N+     S+YLPGSTKI E+SL DMQEVLQQ
Sbjct: 301 TAITRQVKGPGAELSRRVQSLQTISRAQANSIAAGSSLYLPGSTKIDEQSLIDMQEVLQQ 360

Query: 411 QTDAIARLGNVLKRDIRDMEIIMAEDTEM 429
           +T+AI RLGNVLKRD+RDMEI++AEDTEM
Sbjct: 361 ETEAIGRLGNVLKRDMRDMEIMVAEDTEM 373

The following BLAST results are available for this feature:

BLAST of Spo05992.1 vs. NCBI nr
BLAST of Spo05992.1 vs. UniProtKB/TrEMBL
BLAST of Spo05992.1 vs. ExPASy Swiss-Prot
BLAST of Spo05992.1 vs. TAIR (Arabidopsis)

BLAST of Spo05992.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902237167\|gb\|KNA24677.1\|	3.6e-206	100.	hypothetical protein SOVF_0136...	[more]
gi\|731343246\|ref\|XP_010682798.1\|	1.7e-171	83.6	PREDICTED: nuclear pore comple...	[more]
gi\|255547750\|ref\|XP_002514932.1\|	1.2e-137	71.0	PREDICTED: nuclear pore comple...	[more]
gi\|694393760\|ref\|XP_009372307.1\|	1.2e-137	71.5	PREDICTED: uncharacterized pro...	[more]
gi\|743896479\|ref\|XP_011041512.1\|	1.6e-137	72.8	PREDICTED: nuclear pore comple...	[more]

BLAST of Spo05992.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S0P3_SPIOL	2.5e-206	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C5F9_BETVU	1.2e-171	83.6	Uncharacterized protein OS=Bet...	[more]
B9RMG3_RICCO	8.6e-138	71.0	Putative uncharacterized prote...	[more]
M5XYB4_PRUPE	2.5e-137	72.5	Uncharacterized protein OS=Pru...	[more]
F6HG89_VITVI	3.3e-137	72.5	Putative uncharacterized prote...	[more]

BLAST of Spo05992.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
NUP54_ARATH	2.3e-123	65.0	Nuclear pore complex protein N...	[more]
NUP54_RAT	4.1e-8	25.2	Nuclear pore complex protein N...	[more]
NUP54_HUMAN	3.5e-7	24.3	Nucleoporin p54 OS=Homo sapien...	[more]

BLAST of Spo05992.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G24310.1	1.3e-124	65.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024864	Nucleoporin Nup54/Nup57/Nup44	PANTHER	PTHR13000	NUCLEOPORIN P54	coord: 60..430 score: 6.2E
IPR025712	Nucleoporin Nup54, alpha-helical domain	PFAM	PF13874	Nup54	coord: 217..361 score: 8.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0006406	mRNA export from nucleus
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
cellular_component	GO:0005643	nuclear pore
cellular_component	GO:0005730	nucleolus