Spo06054.1 (mRNA)

Overview
NameSpo06054.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
Description40S ribosomal protein S10-1
LocationSpoScf_00962 : 143656 .. 155345 (-)
Sequence length3576
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCAAAAAGACCATTTATTAGTGGAGGTTTCCCCAACGGCAGGGCTTTCTAGGAGCGGCGTCTTGGAAAGGCACCTTAGGTCAGTTGGCTAGGAAGCAAAAGGGCCTATAAGAGGATGAGGAGGGCGGTCTGATTTTATTTGATTTATTTTAGGAAGTTCCTAATGTAGACATGAAGACATGCATCTTTTGTTGCAAGTTTAATATAACCGGGTAAACAACTACATGTTAAAGGTTTAGGGTGAGTGCATTGATGATAAAGGTGTTACCTAGATTTCTAAAAGCTATTTTACATAGACATTCATGAAAGAGGTGTTGGAGGAGATCCTTTTACAACTAGGGTTTTGGAGAAGATCCTTTTACAACTTCTGGTAGCTGCTGTTTGAGTCTCTTCATGCCTCTGCAGTTCGCATCATCTCTCTCCTCCAATCTCAAGCGCAACCATGGTTCGTCTTCATCCTCTCCCTCCCTCCTCCCTTTCTCAACCTTCTGTCATTTCCATCGTGTAATTTTAATCATTTTCTTTCTCTTTTATTTTCTGTAGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGGTCTGTTGCTATCTCCTAATCTCAATATCAAATCTGGTCATCTGTGAATTTTAATATTTTCTGCTATGTTTTGCTGGTTTTCTGTATCATTGTATTAGGTTTTTATGAATTCATGATATACAATTATGCTATGAATTTTATTGCTTTTTTTTCCTGGGAAATATACTGTTAAGAGATTATTGTTTTTTCCGGGAAATATATTGGTGCGAGATTGCAATTTGAAGATACGCAACACGTGTGCATATGATTTGTTGATTGGATATAGTTTATGTGTCGTAGTTAGAAAGTAATACCCTTTTTGTTTGATTTGTATGGATTCAATTTTCTTAACTATTTGCAATTTTCAATTTAAGATTCTGTTCTTGTTGTCTAAAGTTTGTCCAAATTATTGACTTGGTGTTGTGCCTTTGAGAAACCTTTTGCTAATTTTGAACAACACAAATTGTTTTCTACCACCATGTGAGAGTATGCTATTATTGATGGATTCCATGAAGATTTGTTTGACAATCAAATGTTGGAGTTGCATATCATATATGTTCCAAAGTACTCGACCGGTCAGTAAATAAAGCTACGATGTTAAAACTTACAACTTGTCCATCTAAAGGAGTAATAATGATAATCTGATTCTTAAAAGTGACCTTTAGTAAAGGGTATTGCAGTAGATTCCGTAGTATTCAGGAACGGGGGAGTAAGTGTGTTTATGTGTTCTGTTTGATTCTGAATGAGTGCAACTGAGACGTGGTGTGGTACTCTGGTGCGTGTCTTAATTGAACAGCAAAGGGTGTGTACTTTGATAAGGAGGACTACAACCTTGCAAAGCATCCTGACATCGATGTCCCAACTCTCCCAACTCTGTAAGTGATTAAGCTCATGCAGATCTTTAAGTCGAAGGAGTATGTCCGTGAGAGCTTTGCCTGGATGCACTACTGCTGGTACTTGACAAACGATGGTATTGAATTCTTGAGGACTTACCTCAACCTCCCTTCGGAAATTGTTCCTGCTACCCTTAAGAAGCAGATGAATTAAGGTTGTTGTTCGTCCCATGGGTCCCGGTGGTAATCGCCCACGGTATATTTTTGCTTGTTACTTGTGTGTGTTGTGTCTTCTCAGCTAACTGATCTTTTTTTCTGTGATTATTTGCTTGTTAAATGGTTTGTCTTGTCTATTTACAGTATCCCACCTAGGTTTGGGGGTAAGCGACCAAGGTCGGTGACCGTGAGGGTTACCGCTCAGGACCTCGTGGACCACCTGGTGAATTCAGTGGTGAGAAGGGTGGAGCTCCAACTTATTACCAACCTTCATTTGGTGTAAGTAATTCGATACAAATGGTTTTATAGTACTTGCAAAGTCCTAGGTGTTTGAGATGGCTATTTAAAACCTTTAGTTTCCTTCTGTGTTTTGTGTGAACAAAATCCCCCCCTTGCCCCCAAGTTGGGATTACTGAAAAGTGTTGTGGTTTATTGTGCTCCAAGTTGAAGTAAATATTGTACAAGTTTGTAATTACGTTTGAAGTAAATAATGTACAAGTTTGTAATTACGAAGTAGGTATTATTCTTGCTGAATTGCATGAGATATTTATATCTTCCCAGGATCTGTCTTTCTTATATCTCTCTAGGATCTATCTTTCTTTCTCACTCTTATTTTTAATAAATAAATCATGATTTTACTTGCAACGTGATAAAAGTTTCTCAAATTATATATTTATGTATGATTTCACGACCTTCGTCGTATACTGATCTAAGTTATGGGCTCGGGTCATCAACGACCGTGTTCTCACTAGAAAGTAAGAATCTGAGAGGGGGGGGGNGGGGGGGGGGGGGGGGGGTTGTGTAGTTTGTTTTATAAGCTATGGGTTGTCAACGAATGGGTTCTCATAGAAAGTACTTCGTAAGAATTTGAGGTTTTTCTTTCATTATAAATATAGTTTGTTTGAAAGTTATAAGAGTTTGAATAACTTTGAATTGCGGTATCCAGATACCTGATTGTTCTTCAATTACTGTTCTGAAGTCCGGGTGTATGTTATTGTTGTATGTTTATCTCTTGTAAAAGATACTTAACTGGATGAATGGTCTGTTTTTTGACAGGGACGAAGTCTAATTTCTGTTTATGATTCACCGAAAGTCCTAGCCGTCTACATCAACCTTAAAGGTCATGCTCATTGATGGATTATGTTCCTTGAAGTTGCTTTGATTTCAATGTTGAATAGTTTAACTTACCGTGTGTACCTTCTTCTTGTCTGTAGTGAGGACAATTAAGTCTGTAGTGAGGACAATTAAGAACACAGAGGTGGCTTTTGCATCGATTTCCTCGGTTTCTTTATAAAGGATGGGTCTGATAATACTTCTTGAAAGGACTCCTCAGGTTCTAAGCAGACTACTTTCATGAAACAATGTAATAACTCCCAATTCCCTTAAAGTTGAAGTTTTTTTCTATATTATACTCCAGGCTCCCTAATTACGAGTTTGCTCGTTGACGATAGCAGGGCCTAAGTGTTATTTAATTGTATGCGTATCTATCCCAAGTTCAAGTTTGATCATTAATAATAATTTTGCATTTGCTATTAAGTGTTTTGCGCCGATCTTTTCCGTAATCCTATTTAACATAACAATTTTTTATACCTTGGGGGACCGTGCGCGCTAGCGCACGGGCCAACAACTAGTTTTCACAAGTTTGAGAAGTCTTGAATGAGTATGACGGGTGAAGTGAAGAAATTAAGTAAGTCTGAAAAGATCTCAACAAGAATTTGAGAAATTGAAAATAAATAAAAAGCTGATGTGGAAGTCTGAGCTCATACTAGCGCTAATCTTACTCTAAGGGGAAAATGGAAATTTAATCACAACGTTGACACTTTTTTTTTAATTATTATTTTGAAGGAAGTTCATTATGTTTATTTCTATTTTTTTTATAGAAAAGTTCACATGAAACTTGGATCAAAAACTCATAAATAAAACGGACGTACTTTACCTTAAACTAATCAAAGTTACCGATGTTCAAAAAATTATCTTTTTAATTGGTAAATTTTCCTCTTTACAAAAAAAAAAACCCCGGAAAAATCACTCAATAACCTACCTTTTTTAAGTGGAACTCGTAATGTATAAAATTATTGAATCCTTTAATGAAAATTATCCATGAAAAATCACTAATTGTTTAAAAATTATCCCAATATATTATACACACGAGACAATGACACATACTAAGCTTTTACTTCAATACGACTAGAAAGTAGCAAATGAAAATCATGTACGTTTTCATTTCCTTTTTCTTTGTCCCAAAACTAACACGTACTCGAGTTTCTAAACACAAAGTATAACCTCATATTATTTAAGTAATTTTAACATGTTAGATATAATACGCCGAGTTGTCTGATATATGCGAGGTGTCGATATAGTAGCATCATTCTCCTTACCAATTGGAGTAAAATGAAGGTACTTCGTATATGACTTCATCTTAAAATCGCGATACTACCCCGTAATTAACTAATTAGTAAATGCTTGTTTGGTTTCTTTTTTGAAATGATGAGTTGAAAAACGGAAATTTCCAAATAAGTTAGTTATTTGGTTGACAACAAATTAAAGAATTTCAACTTGTGGAATTTCCAAACTCCCGCGGAACCAAGGAAATTATTAACCTGGCTTCTCCTATGTCACCCAAATTTTTAATGTACTCCCTCCGTTCCATATTAGTTGTTACACTTTCTTTTTTCGTCCGTCCCAGATTAGTTGTTCACTTCTAAATTAGGAATGACCCCATAATTATTATATTGTCTCTCTCCTCCCACTAATTTTTTTTTGTCCCCACACCTTATCTCATTCAATCAAAAAAATACCTTACTAACTTCTATAGTGTAACGACTATTTTGGAAGGGAGGGAGTATTAAAATTTTGTTAATTTCAACCAAACAAGTTAAATACACATTTTAAAATTTTGACGTGAAAGTAATTTCGCACGAAATAAAAATCCCTATCAAATTACATTCCCATTTTAACTAAACAAACAATGAATAAACTAAACACAGAGTAAAAAGAATATTAACACCAAAATAGTACGGAGTAGATTTTAAATCCGGATAGATAGATAAGTAAAGTCGAGACGGCGAGACTCGAGTCTCTAAAACAAAGTCATTGATATGCTTTGGTGCCATTCGTGGTTATTTTCTACACAACGTTTCCGAAAATACCCCTAATATTTATTTCTGCTTTTTAGGCCGGCAATTTCAGTTAAATTAGCAAATTTCGTGTTTTTGGATTTTCAAACTGAAGTGTGAAAGAGAGAGAAGGAGAGAGAGAAGGTGAGGAGAGAGAAGGATTTGCGGTGACAAAAATATTATCCAAAATTGTTAAAAACAAATCAGTTTTTTCGGAGGATCTGATACTATTTGTTGGGGATTTTTCGGAGTTTTTCAAGAGGTACACTATCTTAAATTCTTAAACTTTACTTATATTTTACGAAATATCTTCAACTGTCAAATATTTAAACGGCATTGTTGTTTTAATTTTGAAACTAATTACTGTTTAATTTGCTCATTAATGCAAAAAGTTTCGATCTTGATTACAATTTCAGGGTAATCTTAAACTCATAACCTTAAATTTTCGATAATTTTAAGAGTTTTGGGTGCTGTTTCATTGACTTTTCCTATTTTTTTTAACGTTAGAAAAAATCTTAGAAATTTATTAAGGTTGTTGAATGTGGAAGACGTTTAAGGAAGAAAAAAAATCAGTGATTTCTAGAGAGAGAGCTTCTGAAGGTTGCTTTAGAGTAAAGGGAGAAGCTTTACTATTAAGATTGCTAGATTTCTTTCTTTTTATGGAAGCTTAAGAGGAAAGATCAAGCAAACTTTTTTTTGTTTTTGTTTTTGATTTATGATTAACAACCTAATCCCATGATTGTAACTTGTAAACCCCCATGTTTTCTTCTCTCTTAATTGTTTAATTTTGTTGTTTAGTCCAGTTAATTAAATTAATCCCAGTTAAGAAAAGTGTGGAAAAATGCTATAATTAGCTTTTAAAAAAAAATATATGTTAATTTTATTTGCTTGGGGTGTTATTTTTACAGGGAATAAGGTAGAAAGGTAGTACATTTGCTTTTGTGAGCTGTTGAGACATCCAATTTTCATGATGACAATGCTTTTGCTGGTGTGACTAAAATTAACTGACTTCGTTGATTTTGTGGGAATCACAGGAAACTGCAGTGAGTTGTTAAAGTTTATTATGGTTCTTTCCTAATTTTAGGGTGTTTTTGTGTACAATGAATGTTGTTGATTGTGGTAAGGACACGTTTTTCAGGTTTGGGTGTTGAATGGGGGCGATTGCCACAGAGGAGTTGAGTAAGTCTGATAAGATAACGGGAGCTATGGCGGAGCGAGAGGAGAAGATCTTGGTGTTGGTTAGATTAAGGCCCTTGAATGACAAGGAGATTTCCAAGAATGAGGTAGCTGATTGGGAATGTATCAATGAAAGCTCCATTTTGTATAGAAATAGTCTTCAGGAACGATCTGGACTTCCCACGGCCTATTCATTTGGTAAGCCTATATTTTAGCTATAAGATCATTTTTAAACTCCATGATTTATTATTGTTATTACCGATACTTTGTTTTTTTAGAGGATTGTAAGGATATTGTGATTGATGGAATATGTAGATAAGTAAATATTGTAACATGTCAAGGTCTTTGTGTTTTCCCCCAAACTTATTGCTCATGCAAATAACGATGTATTTCTCGAGTATTAGACCATTATGAGATGCCATGTTAAATATATGAAATTGCACAAGAGAAGTGAAGAACCTTTGATTTAGGTAACTTTTTGACAATGCTATGTTGGTTCTGAAGGGGAGCATTGATTCTTGATTATGTATTTATGTTCCAACGAAATGCAAAATCTTGTTTTTACTTTATCTTTGTACTGGTTGGTAGACAGGGTATATTCAGGCGATTGCTCCTCCAAGCAGGTCTATGAGGAGGGAACTAAGGAAATTGCTCTTTCTGTTGTTAGTGGGATTAATTGTAAGTACAATATCAGTATTTTTATTTCTAATCATTACAATTTACAGGGTATTTTTTTTTTACAAAGATACAGCGTATGAAGTGTATTCATCGAAACTATTTTTTTCTCCTTAGCAAGCATTTTTGCTTATGGACAAACAAGCAGTGGAAAAACATACACCATGAATGCAATAACTGAGTATACGGTTGCAGATATATATGACTATGTACAAAGGGTAATAAAAAAATTGGAGTTCTTTCTATCTAGTTTGGTTTCTAACTCAAACATAATGTTACTAAAATAAGCTCATGTGGCCCTTCAGCATGAGGAACGAGCGTTTGCTCTCAAGTTCTCTGCCATGGAGATCTACAATGAAAATGTTAGGGATCTTCTTAGCACGGACAATACTCCTCTGCGGCTTATGGATGACCCTGAGGTACATTTAATTCCCCTGAACTAGAATATTGTGGGATTGCACATTTACTGACGTGACTGTATTTCACCAGAAAGGAACTATTGTGGAAAAGCTGACAGAGGAAAAGATAAATGATTGGAACCATTTAAGAAAGCTGCTATCAATTTGTGAAGGTAAAAATTAGAGAGTATTGGTTTGGATATAAACTTCTCATTCATTATGTTCTTGTTTATTCACTTTAATCATGACATTGCAGCTCAAAGGAAAGTAGGAGAGACCTCCTTGAATGAACAAAGCTCAAGGTCACATCAAATTCTTAAGCTGGTAAAATTCTTCCTTCAATTTTCGTTCAACCCCTTATTCCATCATTTGTGTATTCATCTCCTTATGCTTTTCTTGATATTTGCAGACAATCGAGAGTTCTGCGCGTGAGTTCATAGGCAAGGGAAACTCAAGTACCCTTTCAGCTAGTGTGGTAAGCAACCTAGAACTTAAGTACCTCTTGCTCCATTTTGTTTAATACAACATTTTACTTGCTGATACAGTGTGCACACGATACAATTGCTGACAAGTTGATGTGTATCAATTGCTCAGTTCTATTCTATTTGTTTACATATTCTCCTTCAGGTTGTCAAACCAACATGACTTCATTGATGTTCTTCTACAGTTTTTTATTGATCTGGCTGGAAGTGAGCGTGCATCTCAGGCAATGTCAGCTGGAACACGGCTAAAGGAAGGCTGCCACATAAACCGGAGTCTGCTGACACTAGGGAATGTTATCCGCAAGCTAAGGTTTCTTCTTGAATTCCAGTTCTATATCTTCTTTTTCTTGGAATACTTCTGACATATTGCTACCGTTATATATTATGTTTCAAAAAAATCACGACTTTTAGTGTATTCCATGGTAGTCTGGTCTTCTGCTTGTCACAATAAAGAAAAAAAGTGTAACATTAGGCATTCTCTATTTTCTGCATAACTTGTAATGATCATATGCTGAAACACTAGTGATCTTTGACAGCTCACCAATCTTACTCTGTCTTGCTGCAGCAAGGGTAGACAAGGACACATCAATTATAGGGACTCTAAACTGACCCGTATCCTGCAACCCTGCTTGGGAGGCAATGCTAGGACCACCATCATTTGCACTCTGAGCCCTGCACGTAGTCATGTGGAGCAGTCAAGGAACACTTTGTTGTTTGCTAGTTGTGCTAAACAGGTGACAACAAATGCACAGGTGAATGTTGTCATGTCAGACAAAGCCTTGGTCAAACACTTGCAGAAAGAATTGGCCAGACTGGAAAACGAGCTAAAAAGTCCAGCCCCTACATCATCGTCTTGCAATTGTTCAGTGACCATAAGAAAGAAAGATATTCAACTGGAAAAGGTACTGTTTTTCTTTCTGAGCTGTTCTAAGAAAGTGGCTGAGGTGCTATCTGCATTTAGTATACTTTAACATACAAGACTCTGACTCAGTTGATTGGCTGGCTTCTGGGATATCTGTACGGTCAGTTTCCAGGGGTAGTCACCTAGCTGTTTTGTTCAGTTTGCGACTTCTAGGGAGACTATGTAATCATCACCCGAAATACTGAGTCTTTACGTAGTCCTGCTAAATATTTGGTCCATTTGTCCTACATAATAGCTACAGATACTATTTTGGGTAATATGGATAAAGCCGTCACCTTTACTTCGACTTTGTGATTGGATTTCTAAGGGACTACCTACTTAGATTGAGAAATAGAGAGTTTGTGGGGGGTAGTCCAAATACTTAACGGGTCTTTGAATAAGATTATGTCATATGCTTATTGATAAATGTCCTTCGAAAGTTTCCTATTTTGATCCTGCTATCTGGACCATATTAGCTAAATTATCTTTATTCTTAATTAGTGTTCTGCTGCATGTGAGATTTTTGGAGGTGATGAAGGCTGAAATTTATTTTGTCTTGTCTGGAAGGAATACATATGTGTCTCAGAAATAGCTATAGCTCAGGGTTAGAAAACATTTACCACGATGCACATGCTTATACAGTGCTAAACATTATATTCGGTTCGGTTCATCACCCATAGCTGCTTATACAACTACCTCACTAGTGGGAGGGAAGAGTCGGATGCACTGAATGCCTACAATGTCTTTATTTTTATGTACAGATGGATAAGCAGATAAGGGAACTGACTAAGCAACGAGATCTTGCTCAATCTAGGGTTGAGGATTTATTGCAAATTATTGGAAATGATCAATCATCTAATAAACAGGTATTTAGAATGTAACATATTAATTTCTCCTTTCATTTTTTTTTTCAACACCTGTTGCAAGGTGAGAATGCTTTAATTTCTGTGGGTTAGTAACAAATCTCCAGAACAAATAGTAAACAAAATGCACCTTGAAAATTGCTTCTTCGGTTACTGATTTGTTTATTTTTTCTCCCATCAGCAACGGCAAAAACCCCATGCAAAGTGGAAAGTACAGAACAAATGGGAAGATGAAGGTTCTATTTCAGACTCTAGTGTGAATGGTCATCATCGCCTGGATGGTGTCCTAGCTGAAGATGGAGAAAGTTATATTGAGGATCCATCTTCAAGGGGAGTTTCTGATGACCAGTGTAAAGAAGTTCGATGCATTGAGATGGAAGGATCTGAAGCTTCTATTGGGTTTGGAAACGGGCATGCTGCTAATCATGGTAGCATAGGTAGGAGCTCCCATCAAAATGGTTTCTTCTATGGTTCATTGGAACAAAGGATCCAGGAAGTGCAAAGGTCAATCGATTCCCTTACTAGTCCTCAACCCGAAAATCCATCCGTATGGGATGATGCTGCGGATGCATCAAGTTCCAGGAGCCTGAATTTCAGCAAGACTCGGGTTTCAAAGGAAAATTATACAAATAAGGAAGAACATTCAGAAACAACCCCTCCTTGTGAAGTGGAGACGGACTTCAACGGCAGACCAGGAGGATTTAGAAAGTTTGCTGTACTAGATTATGGTGCGGACTCTGGAAAATTGTCACGCAACGGCTCTCAGTCATCTGTTGGGACAGAAGTTGTTGATGATGTAAGATCAGAGGGTGGGAGGAATATCACAGATGCGGAGATTACTAGCGTACAGACTTTTGTAGCTGGTCTCAAGGATGCTAAGCTTCAATATGAGAAACAACTTGGGGACGGCCAGGTTAGCATACTGTTATTCTTAGTTGTTGCATACTAACAATTGTGAAAAAGATATCAGCATTTACTTTGCAGTACTTTCTGGTATTTTATAATCCCCTGTCATTAATTTTTCTTAGAATGTTATCTTCGAATATTACTGTGCCATATTTGCTAATTTTGATATCTTACCTATGTGATTGTCCTGGCTAATTTTGGTGCAACTTTTAATTTTGTATTTTTTTTGTTGATATGATTAGGTACGTCCCGAGTTGAGAAAGACCTTGAGAGATGTGGGATTGGATCCTATGCTTGATGGAGAAGACAGTACATTGGATTGGAGTTTGCAATTTGAAAGGCTTCAGAAAGCTATAGTTGAGTTGTGGCAAATTTGCAATGTTTCATTGGTTCACAGGACCTACTTCTTCCTTCTCTTTAATGGCGAGCCTACAGATTCCATTTACCTGGAGGTAGAGTTAAGGAGGCTCACTTTCCTCAAGGATACATTACCCCATGGTAATCGTTCGGTAGATAGTGGACGTGCTCGGAAATTGGTTTCAAGGTTCGCTCTTTTCTCCCCATTTTTTTGTAATCAAATCTCATTTTAAGATATTTGGACACATGGCCAATGCAAGTATATTACAGAGCAGTCATGATTTTCTCAATTATGTTATGTTGAAATTTGACACAAACTGTAATAGACCAATTTAAGGTGGGCCAACTAAGTAAATTGTGTTTGGTGGTGAAACAGCGAGAAGGCACTTAGAAAAGAGAGGGAGACGTTGAGCAAGCTGATCAACAGAAGGTTCTCAAATGAGGAAAGGAAGAAACTATACACGAAGTGGGGTATCAGGCAGGATTCAAAGCGCAGACGTTTACAGCTTGTATCTCAGTTATGGACAGAGACAGGAGACATGGATCATATTGTGGAGAGTGCAACCATCATAGGAAAACTAGTAAAGTTCTCAGAGCAAGGACGAGCTCTGAAAGGGATGTTTGGGGTTAGCTTCTCACCTCCAAGCTTGAAGAGGAGTTCATATGGCTGGATGAACGGCATGTCATCCCTTGTATGAGAGATTAGTGTTTGACTTGTGTTAGTCTGTTAGCCTGTAGGTATCTATCTATATATTAATATAGTTGAAGTTAGCCACACATACAGACAGTTCAGTTTAACTAAAGTATCACCCATTCTTTCCATATTTGTAGGTGAATCATAAAATTGTGTCTGATTCACGTAAACACAGATTAGGAAAGTTGTATGTTGGTGTCTGGTTTTGTGCTGCTGGTGATTGTATTTAACTGTGAGTTTAGGAATGGGTACTTTTTACCAGGTATTTTAGTACTGTAGCTAATTGTGAGTTGATGAGCTCTTCTAGAGTTCTAGCTGCTTGGCGCGATTATCAAGTTTTATTCAAGTCTATACTGTATGTATACTTCATCTGCAATTTTTATTATGCAGTATTCCGAGCTTTATGTATTGCTCCAGTTGTTCATATATTTAGATTTACCAACTCTACATTTGTAAATCACATGATATTTATGTGGGTCTCGTGGATTTCGAGGGCCT

mRNA sequence

ATGCTGCAAAAAGACCATTTATTAGTGGAGGTTTCCCCAACGGCAGGGCTTTCTAGGAGCGGCGTCTTGGAAAGGCACCTTAGTTCGCATCATCTCTCTCCTCCAATCTCAAGCGCAACCATGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGCAAAGGGTGTGTACTTTGATAAGGAGGACTACAACCTTGCAAAGCATCCTGACATCGATGTCCCAACTCTCCCAACTCTTGGTGAGAAGGGTGGAGCTCCAACTTATTACCAACCTTCATTTGGTGGACGAAGTCTAATTTCTGTTTATGATTCACCGAAAGTCCTAGCCGTCTACATCAACCTTAAAGTGAGGACAATTAATTTTTCAAGAGGGAATAAGGAAACTGCAGTTTGGGTGTTGAATGGGGGCGATTGCCACAGAGGAGTTGAGTAAGTCTGATAAGATAACGGGAGCTATGGCGGAGCGAGAGGAGAAGATCTTGGTGTTGGTTAGATTAAGGCCCTTGAATGACAAGGAGATTTCCAAGAATGAGGTAGCTGATTGGGAATGTATCAATGAAAGCTCCATTTTGTATAGAAATAGTCTTCAGGAACGATCTGGACTTCCCACGGCCTATTCATTTGACAGGGTATATTCAGGCGATTGCTCCTCCAAGCAGGTCTATGAGGAGGGAACTAAGGAAATTGCTCTTTCTGTTGTTAGTGGGATTAATTCAAGCATTTTTGCTTATGGACAAACAAGCAGTGGAAAAACATACACCATGAATGCAATAACTGAGTATACGGTTGCAGATATATATGACTATGTACAAAGGCATGAGGAACGAGCGTTTGCTCTCAAGTTCTCTGCCATGGAGATCTACAATGAAAATGTTAGGGATCTTCTTAGCACGGACAATACTCCTCTGCGGCTTATGGATGACCCTGAGAAAGGAACTATTGTGGAAAAGCTGACAGAGGAAAAGATAAATGATTGGAACCATTTAAGAAAGCTGCTATCAATTTGTGAAGCTCAAAGGAAAGTAGGAGAGACCTCCTTGAATGAACAAAGCTCAAGGTCACATCAAATTCTTAAGCTGACAATCGAGAGTTCTGCGCGTGAGTTCATAGGCAAGGGAAACTCAAGTACCCTTTCAGCTAGTGTGTTTTTTATTGATCTGGCTGGAAGTGAGCGTGCATCTCAGGCAATGTCAGCTGGAACACGGCTAAAGGAAGGCTGCCACATAAACCGGAGTCTGCTGACACTAGGGAATGTTATCCGCAAGCTAAGCAAGGGTAGACAAGGACACATCAATTATAGGGACTCTAAACTGACCCGTATCCTGCAACCCTGCTTGGGAGGCAATGCTAGGACCACCATCATTTGCACTCTGAGCCCTGCACGTAGTCATGTGGAGCAGTCAAGGAACACTTTGTTGTTTGCTAGTTGTGCTAAACAGGTGACAACAAATGCACAGGTGAATGTTGTCATGTCAGACAAAGCCTTGGTCAAACACTTGCAGAAAGAATTGGCCAGACTGGAAAACGAGCTAAAAAGTCCAGCCCCTACATCATCGTCTTGCAATTGTTCAGTGACCATAAGAAAGAAAGATATTCAACTGGAAAAGATGGATAAGCAGATAAGGGAACTGACTAAGCAACGAGATCTTGCTCAATCTAGGGTTGAGGATTTATTGCAAATTATTGGAAATGATCAATCATCTAATAAACAGCAACGGCAAAAACCCCATGCAAAGTGGAAAGTACAGAACAAATGGGAAGATGAAGGTTCTATTTCAGACTCTAGTGTGAATGGTCATCATCGCCTGGATGGTGTCCTAGCTGAAGATGGAGAAAGTTATATTGAGGATCCATCTTCAAGGGGAGTTTCTGATGACCAGTGTAAAGAAGTTCGATGCATTGAGATGGAAGGATCTGAAGCTTCTATTGGGTTTGGAAACGGGCATGCTGCTAATCATGGTAGCATAGGTAGGAGCTCCCATCAAAATGGTTTCTTCTATGGTTCATTGGAACAAAGGATCCAGGAAGTGCAAAGGTCAATCGATTCCCTTACTAGTCCTCAACCCGAAAATCCATCCGTATGGGATGATGCTGCGGATGCATCAAGTTCCAGGAGCCTGAATTTCAGCAAGACTCGGGTTTCAAAGGAAAATTATACAAATAAGGAAGAACATTCAGAAACAACCCCTCCTTGTGAAGTGGAGACGGACTTCAACGGCAGACCAGGAGGATTTAGAAAGTTTGCTGTACTAGATTATGGTGCGGACTCTGGAAAATTGTCACGCAACGGCTCTCAGTCATCTGTTGGGACAGAAGTTGTTGATGATGTAAGATCAGAGGGTGGGAGGAATATCACAGATGCGGAGATTACTAGCGTACAGACTTTTGTAGCTGGTCTCAAGGATGCTAAGCTTCAATATGAGAAACAACTTGGGGACGGCCAGGTACGTCCCGAGTTGAGAAAGACCTTGAGAGATGTGGGATTGGATCCTATGCTTGATGGAGAAGACAGTACATTGGATTGGAGTTTGCAATTTGAAAGGCTTCAGAAAGCTATAGTTGAGTTGTGGCAAATTTGCAATGTTTCATTGGTTCACAGGACCTACTTCTTCCTTCTCTTTAATGGCGAGCCTACAGATTCCATTTACCTGGAGGTAGAGTTAAGGAGGCTCACTTTCCTCAAGGATACATTACCCCATGGTAATCGTTCGGTAGATAGTGGACGTGCTCGGAAATTGGTTTCAAGCGAGAAGGCACTTAGAAAAGAGAGGGAGACGTTGAGCAAGCTGATCAACAGAAGGTTCTCAAATGAGGAAAGGAAGAAACTATACACGAAGTGGGGTATCAGGCAGGATTCAAAGCGCAGACGTTTACAGCTTGTATCTCAGTTATGGACAGAGACAGGAGACATGGATCATATTGTGGAGAGTGCAACCATCATAGGAAAACTAGTAAAGTTCTCAGAGCAAGGACGAGCTCTGAAAGGGATGTTTGGGGTTAGCTTCTCACCTCCAAGCTTGAAGAGGAGTTCATATGGCTGGATGAACGGCATGTCATCCCTTGTATGAGAGATTAGTGTTTGACTTGTGTTAGTCTGTTAGCCTGTAGGTATCTATCTATATATTAATATAGTTGAAGTTAGCCACACATACAGACAGTTCAGTTTAACTAAAGTATCACCCATTCTTTCCATATTTGTAGGTGAATCATAAAATTGTGTCTGATTCACGTAAACACAGATTAGGAAAGTTGTATGTTGGTGTCTGGTTTTGTGCTGCTGGTGATTGTATTTAACTGTGAGTTTAGGAATGGGTACTTTTTACCAGGTATTTTAGTACTGTAGCTAATTGTGAGTTGATGAGCTCTTCTAGAGTTCTAGCTGCTTGGCGCGATTATCAAGTTTTATTCAAGTCTATACTGTATGTATACTTCATCTGCAATTTTTATTATGCAGTATTCCGAGCTTTATGTATTGCTCCAGTTGTTCATATATTTAGATTTACCAACTCTACATTTGTAAATCACATGATATTTATGTGGGTCTCGTGGATTTCGAGGGCCT

Coding sequence (CDS)

ATGCTGCAAAAAGACCATTTATTAGTGGAGGTTTCCCCAACGGCAGGGCTTTCTAGGAGCGGCGTCTTGGAAAGGCACCTTAGTTCGCATCATCTCTCTCCTCCAATCTCAAGCGCAACCATGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGCAAAGGGTGTGTACTTTGATAAGGAGGACTACAACCTTGCAAAGCATCCTGACATCGATGTCCCAACTCTCCCAACTCTTGGTGAGAAGGGTGGAGCTCCAACTTATTACCAACCTTCATTTGGTGGACGAAGTCTAATTTCTGTTTATGATTCACCGAAAGTCCTAGCCGTCTACATCAACCTTAAAGTGAGGACAATTAATTTTTCAAGAGGGAATAAGGAAACTGCAGTTTGGGTGTTGAATGGGGGCGATTGCCACAGAGGAGTTGAGTAA

Protein sequence

MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTLGEKGGAPTYYQPSFGGRSLISVYDSPKVLAVYINLKVRTINFSRGNKETAVWVLNGGDCHRGVE
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo06054Spo06054gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo06054.1Spo06054.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06054.1.CDS.11Spo06054.1.CDS.11CDS
Spo06054.1.CDS.10Spo06054.1.CDS.10CDS
Spo06054.1.CDS.9Spo06054.1.CDS.9CDS
Spo06054.1.CDS.8Spo06054.1.CDS.8CDS
Spo06054.1.CDS.7Spo06054.1.CDS.7CDS
Spo06054.1.CDS.6Spo06054.1.CDS.6CDS
Spo06054.1.CDS.5Spo06054.1.CDS.5CDS
Spo06054.1.CDS.4Spo06054.1.CDS.4CDS
Spo06054.1.CDS.3Spo06054.1.CDS.3CDS
Spo06054.1.CDS.2Spo06054.1.CDS.2CDS
Spo06054.1.CDS.1Spo06054.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06054.1.utr3p.13Spo06054.1.utr3p.13three_prime_UTR
Spo06054.1.utr3p.12Spo06054.1.utr3p.12three_prime_UTR
Spo06054.1.utr3p.11Spo06054.1.utr3p.11three_prime_UTR
Spo06054.1.utr3p.10Spo06054.1.utr3p.10three_prime_UTR
Spo06054.1.utr3p.9Spo06054.1.utr3p.9three_prime_UTR
Spo06054.1.utr3p.8Spo06054.1.utr3p.8three_prime_UTR
Spo06054.1.utr3p.7Spo06054.1.utr3p.7three_prime_UTR
Spo06054.1.utr3p.6Spo06054.1.utr3p.6three_prime_UTR
Spo06054.1.utr3p.5Spo06054.1.utr3p.5three_prime_UTR
Spo06054.1.utr3p.4Spo06054.1.utr3p.4three_prime_UTR
Spo06054.1.utr3p.3Spo06054.1.utr3p.3three_prime_UTR
Spo06054.1.utr3p.2Spo06054.1.utr3p.2three_prime_UTR
Spo06054.1.utr3p.1Spo06054.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo06054.1.exon.23Spo06054.1.exon.23exon
Spo06054.1.exon.22Spo06054.1.exon.22exon
Spo06054.1.exon.21Spo06054.1.exon.21exon
Spo06054.1.exon.20Spo06054.1.exon.20exon
Spo06054.1.exon.19Spo06054.1.exon.19exon
Spo06054.1.exon.18Spo06054.1.exon.18exon
Spo06054.1.exon.17Spo06054.1.exon.17exon
Spo06054.1.exon.16Spo06054.1.exon.16exon
Spo06054.1.exon.15Spo06054.1.exon.15exon
Spo06054.1.exon.14Spo06054.1.exon.14exon
Spo06054.1.exon.13Spo06054.1.exon.13exon
Spo06054.1.exon.12Spo06054.1.exon.12exon
Spo06054.1.exon.11Spo06054.1.exon.11exon
Spo06054.1.exon.10Spo06054.1.exon.10exon
Spo06054.1.exon.9Spo06054.1.exon.9exon
Spo06054.1.exon.8Spo06054.1.exon.8exon
Spo06054.1.exon.7Spo06054.1.exon.7exon
Spo06054.1.exon.6Spo06054.1.exon.6exon
Spo06054.1.exon.5Spo06054.1.exon.5exon
Spo06054.1.exon.4Spo06054.1.exon.4exon
Spo06054.1.exon.3Spo06054.1.exon.3exon
Spo06054.1.exon.2Spo06054.1.exon.2exon
Spo06054.1.exon.1Spo06054.1.exon.1exon


Homology
[Close]
BLAST of Spo06054.1 vs. NCBI nr
Match: gi|902233952|gb|KNA23267.1| (hypothetical protein SOVF_026480 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 96.3 bits (238), Expect = 4.800e-17
Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1 

		  

Query: 1   MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQ 58
           MLQKDHL VEVSP  G SRS VLERHLS HHLSPPISSA MIISEKN KEISKYLFQ
Sbjct: 79  MLQKDHLFVEVSPRTGFSRSDVLERHLSLHHLSPPISSAAMIISEKNCKEISKYLFQ 135
[Close]
BLAST of Spo06054.1 vs. NCBI nr
Match: gi|902233951|gb|KNA23266.1| (hypothetical protein SOVF_026480 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 96.3 bits (238), Expect = 4.800e-17
Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1 

		  

Query: 1   MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQ 58
           MLQKDHL VEVSP  G SRS VLERHLS HHLSPPISSA MIISEKN KEISKYLFQ
Sbjct: 79  MLQKDHLFVEVSPRTGFSRSDVLERHLSLHHLSPPISSAAMIISEKNCKEISKYLFQ 135
[Close]
BLAST of Spo06054.1 vs. NCBI nr
Match: gi|902217602|gb|KNA17791.1| (hypothetical protein SOVF_076880 [Spinacia oleracea])

HSP 1 Score: 68.6 bits (166), Expect = 1.100e-8
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISEKNRKEISKYLFQ +GV + K+DYNLAKHPDIDVP L  +
Sbjct: 1  MIISEKNRKEISKYLFQ-EGVCYAKKDYNLAKHPDIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. NCBI nr
Match: gi|828330699|ref|XP_012574477.1| (PREDICTED: myb-like protein Q [Cicer arietinum])

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-8
Identity = 40/74 (54.05%), Postives = 51/74 (68.92%), Query Frame = 1 

		  

Query: 13  PTAGLSRSGVLERHLSSHHLSPPISS--ATMIISEKNRKEISKYLFQAKGVYFDKEDYNL 72
           P +  S  G+      ++ LSP  SS  ATMIISEKNR+EI KYLFQ +GV + K+D+NL
Sbjct: 320 PNSSSSNMGI------TNSLSPFPSSYIATMIISEKNRREICKYLFQ-EGVCYAKKDFNL 379

Query: 73  AKHPDIDVPTLPTL 85
           AKHP+IDVP L  +
Sbjct: 380 AKHPEIDVPNLQVI 386
[Close]
BLAST of Spo06054.1 vs. NCBI nr
Match: gi|388521299|gb|AFK48711.1| (unknown [Lotus japonicus])

HSP 1 Score: 67.8 bits (164), Expect = 1.800e-8
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISEKNRKEI KYLFQ +GV F K+DYNLAKHPDIDVP L  +
Sbjct: 1  MIISEKNRKEICKYLFQ-EGVCFAKKDYNLAKHPDIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWP8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_026480 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.400e-17
Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1 

		  

Query: 1   MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQ 58
           MLQKDHL VEVSP  G SRS VLERHLS HHLSPPISSA MIISEKN KEISKYLFQ
Sbjct: 79  MLQKDHLFVEVSPRTGFSRSDVLERHLSLHHLSPPISSAAMIISEKNCKEISKYLFQ 135
[Close]
BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RUQ8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_026480 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.400e-17
Identity = 49/57 (85.96%), Postives = 49/57 (85.96%), Query Frame = 1 

		  

Query: 1   MLQKDHLLVEVSPTAGLSRSGVLERHLSSHHLSPPISSATMIISEKNRKEISKYLFQ 58
           MLQKDHL VEVSP  G SRS VLERHLS HHLSPPISSA MIISEKN KEISKYLFQ
Sbjct: 79  MLQKDHLFVEVSPRTGFSRSDVLERHLSLHHLSPPISSAAMIISEKNCKEISKYLFQ 135
[Close]
BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE56_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076880 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 7.500e-9
Identity = 34/44 (77.27%), Postives = 38/44 (86.36%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISEKNRKEISKYLFQ +GV + K+DYNLAKHPDIDVP L  +
Sbjct: 1  MIISEKNRKEISKYLFQ-EGVCYAKKDYNLAKHPDIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: I3T869_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.300e-8
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISEKNRKEI KYLFQ +GV F K+DYNLAKHPDIDVP L  +
Sbjct: 1  MIISEKNRKEICKYLFQ-EGVCFAKKDYNLAKHPDIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Match: A0A068U9A3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020087001 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.700e-8
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 1 

		  

Query: 33  SPP---ISSATMIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
           SPP    S+A MII EKNR+EISKYLFQ +GV + K+D+NLAKHP+IDVP L  +
Sbjct: 52  SPPSSQFSTAAMIIPEKNRREISKYLFQ-EGVCYAKKDFNLAKHPEIDVPNLQVI 105
[Close]
BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Match: RS10A_ORYSJ (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.100e-8
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MII +KNR EI KYLFQ +GV + K+DYNLAKHP IDVP L  +
Sbjct: 1  MIIPKKNRNEICKYLFQ-EGVLYAKKDYNLAKHPQIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Match: RS10B_ORYSJ (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.100e-8
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MII +KNR EI KYLFQ +GV + K+DYNLAKHP IDVP L  +
Sbjct: 1  MIIPKKNRNEICKYLFQ-EGVLYAKKDYNLAKHPQIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 7.000e-8
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISE NRKEI KYLF+ +GV F K+D+NLAKHP IDVP L  +
Sbjct: 1  MIISEANRKEICKYLFK-EGVCFAKKDFNLAKHPLIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.500e-7
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISE NR+EI KYLF+ +GV F K+D+NL KHP IDVP L  +
Sbjct: 1  MIISENNRREICKYLFK-EGVCFAKKDFNLPKHPLIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. TAIR (Arabidopsis)
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 58.5 bits (140), Expect = 3.900e-9
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISE NRKEI KYLF+ +GV F K+D+NLAKHP IDVP L  +
Sbjct: 1  MIISEANRKEICKYLFK-EGVCFAKKDFNLAKHPLIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. TAIR (Arabidopsis)
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.500e-8
Identity = 28/44 (63.64%), Postives = 34/44 (77.27%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDIDVPTLPTL 85
          MIISE NR+EI KYLF+ +GV F K+D+NL KHP IDVP L  +
Sbjct: 1  MIISENNRREICKYLFK-EGVCFAKKDFNLPKHPLIDVPNLQVI 43
[Close]
BLAST of Spo06054.1 vs. TAIR (Arabidopsis)
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.400e-6
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 1 

		  

Query: 41 MIISEKNRKEISKYLFQAKGVYFDKEDYNLAKHPDID-VPTLPTL 85
          MIISE NR+EISKYLF+ +GV F K+D+NL +HP I+ VP L  +
Sbjct: 1  MIISETNRREISKYLFK-EGVLFAKKDFNLPQHPLIESVPNLQVI 44
The following BLAST results are available for this feature:
BLAST of Spo06054.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902233952|gb|KNA23267.1|4.8e-1785.9hypothetical protein SOVF_0264... [more]
gi|902233951|gb|KNA23266.1|4.8e-1785.9hypothetical protein SOVF_0264... [more]
gi|902217602|gb|KNA17791.1|1.1e-877.2hypothetical protein SOVF_0768... [more]
gi|828330699|ref|XP_012574477.1|1.8e-854.0PREDICTED: myb-like protein Q ... [more]
gi|388521299|gb|AFK48711.1|1.8e-877.2unknown [Lotus japonicus][more]
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BLAST of Spo06054.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RWP8_SPIOL3.4e-1785.9Uncharacterized protein (Fragm... [more]
A0A0K9RUQ8_SPIOL3.4e-1785.9Uncharacterized protein (Fragm... [more]
A0A0K9RE56_SPIOL7.5e-977.2Uncharacterized protein OS=Spi... [more]
I3T869_LOTJA1.3e-877.2Uncharacterized protein OS=Lot... [more]
A0A068U9A3_COFCA1.7e-863.6Uncharacterized protein OS=Cof... [more]
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BLAST of Spo06054.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
RS10A_ORYSJ4.1e-865.940S ribosomal protein S10-1 OS... [more]
RS10B_ORYSJ4.1e-865.940S ribosomal protein S10-2 OS... [more]
RS103_ARATH7.0e-868.140S ribosomal protein S10-3 OS... [more]
RS101_ARATH4.5e-763.640S ribosomal protein S10-1 OS... [more]
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BLAST of Spo06054.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G52650.13.9e-968.1RNA binding Plectin/S10 domain... [more]
AT4G25740.12.5e-863.6RNA binding Plectin/S10 domain... [more]
AT5G41520.11.4e-660.0RNA binding Plectin/S10 domain... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1214640S RIBOSOMAL PROTEIN S10coord: 42..81
score: 5.9
NoneNo IPR availablePANTHERPTHR12146:SF7SUBFAMILY NOT NAMEDcoord: 42..81
score: 5.9

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005840 ribosome