Spo06061.1 (mRNA) | SpinachBase

Overview


Name	Spo06061.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Nuclear pore complex protein NUP43 (Nucleoporin 43)
Location	chr2 : 12624516 .. 12628605 (-)
Sequence length	1536

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTTTTACTCCCAAAGTCACGTACATGAAGAACAAAGTTAGGTACAGTACCAATCTAAACAAAGTCACGTACTACTAAACCATCACTTCTGCACTCCCAAACCTTTCCCTAAACCCTCAAAAACCCTAACAATGGCTGTAAACCAATTCCAAACCCAGCAACACCAAAACCTCCAAATTCATCGTCTCCCCCAATCCAAATTCATCGATGCAGTACGTTGGCTACCTCCATTTGCCGCCTTCGACAAATTCATCGTTCTCTCTCTCTTTGACCCCACTTCCTCCTCTTCCACAATCGAACTCCACTCTCTCGATTTCCCTGATTCCGCAAACCCTAATCCCATCCTCTCTCCCCTCTCCACCTTCTCCTCCCCTTCTCTCTCTAGAACATCCTTTCTCAAAACCTCGCAATCCCTCATTGCCTTCTCCACATTCTCTGGCTCCCTCGATTTTCTCTCTCCTAATTACTCGTCTCCCGACGAGGTTTCTCTCGATTCGTTGCCTTCTTTGCAGGAGAAGGGGTTTCATGTTGGACCCATTTCGTGTATTGATGTTTTGGAGAGGGATTGTGTGAGTGTTGGAGAAGATGGGAGGGTTAATTTGGTGGGATTCGGGGACGGGAAGGCGAGTTATCGGCGGGTTTTCGATAGCGATGGGCTGGTTTCGTATTCGGCTGTGAAATGGGCGTCTCCCATGGAGTTTGCTACTGGTGGGTTGGGGTGTAGTCTTCAGTGGTGGGATCAGAGGAGGAAACCTGGGGAGCCTGCATTACAGTTTAAGGGCAAATGGTGAGTGAATGTTACTCTTTTCAATTTAGATATTTGGATGATACTTCAATTTTTGTGTGCTTGATTGTAGTGTTGTGTTGATTGGCATTTTGATTGTTGAATGTTTACATATTTTCCAAGTCCCTCGCAATGTAGGATGTAAGCCATTTATGATAGTTGTGTGATCATTGTCATATTCTCCCATTTACTAATTGGAGTAGGAAGTCCAATTATAAACCATGATAATTTAAGGAAATGTGGTAACTTTTACCGGAAATCCCAAATTAGTACATGTAACTACATAGTATTGTTTCCAGGAGGAGAGAGTATTATGCAATATGCATTGTATCCTTTGACCCTTTTAGTGTTAAAAATGTTGCATGCACTTGCAACAGAACAATGATCAAGAATTAGACTTGTATTAGACTTGGAGGGTTTAATTAATTGGATTTTGTTGAAAACTTTGAACTAAGCTAAAACGTCTTTTGTGCTCTTAGATGTGTGTGTTCTACTGATTTGAATTTGCAATTGAGCTGGAAAATGGAGTGTACTAGTGAAGGGAAAGTTACTCAAAGGTCCCATATGTATGGGATATAGTTTGGTTATCAACGTTTTGAAGGGAAAAAATGTTCTGTTTAATGGGTATGCTCCTTTCTTCGAATAATGGACAAGTTTCAAGCAACTATCGCAAAGAAACATGGAGGGGGGCTGACTAATCTAGTTTTAAGAGTTCTCTTTATCTAAATCAGGAGAAATTTTGGATTGATTCAGGAACTTGGAAAGAACAACCTATAGGCTATAGGTGAATGAATCATCAGATTTTGAGCAAGCCTGGAAATCCTGGTAGCAAATACTGTTTCTGTCCATAATTTGTTATACTTCAGGAAGTTTTGGTTGTGTTGGTGATCTTTAAGAAAGCTTAACATTTAGATGAATCCCTTAATGCTCAATTTGTAACGCGGTAATACCCGTATAAGGCAGCTAACTTTAGGTTGGGCAGGTAGAGCAAACTTTTTCTTTTAAGTACTAGTAGTAGTTGTATGATAAAATAAGAAGTTTGTTTGTTATGATTTTATACTGGGATTGTAGTAGTGAGTCTAATGACTGATGAGATTCATGCTCTGATGAAGTATAAATGTATAATGTGATACAATAGAAAATACAATAGAAAATACATAGAGCATGTGATGATGTTGGTGTGGTACTGTGGATTGTATAGGCTCATATCTCTCAAATATCGGTTTATACCATAGAAGTGGCAACCAAGTAGCAAACTAGCAATACAGTGGATATCAATATTTAACTTTGGACAGAAAAAAAAAACACTGTTGTCCTTGTGAGCTAACCTTCTGTATCGTATCAATCTATGGAAAGTTTTCTGACATATAATATTTTAGGTCTCAGAAAACTGCTTCTGGAGTTGTGCATTCCATCGATATTCATCCATCAAGAAAGCATACCTGTATGGTAAGATATTAATATTTTCTCTTCTAATGTTGATGTTGTAGGACAGTTTTCTTGTTGACTTCACCTGTGCACTATCTATAGCAGTAAAGCGTACCCTATCATGCTATACAATGCCATACCATTAAGTTGGCACCGACTTGTATTGGGTGTGGTTTCATTTTACGAGGTGTGTATTAGGATGACTGTTTTTTTCTTCTGATCCATTCCTGGCTGTGGTTATAGAGTTGCACTATCACTATTATAGTTTAGAAACCTGATTAATCTATAGAGGAAAATAACAGTTTGATGATAGTTTATCTGAAGTTCTGGTTGACAACACTAAAGCAGCTTCCTATGTTCGCTATGTTTACTTGTGACTGAGGGTAGGATTGATGGGAAGGGGAGAGTATGGAAATCCTTAGAAGTAGAGAAACTTTCTCTTGGATTTCTATTTCCTCTGTATTTAGAAGAGGAAAAAAGACAAGATGTGAGTTTTAAGGTATCAAGGAAGAGAGCAAAAAGGCCATAATCAACTAGTTCAGCTTCAAGATAACAGAATTCATGGATGATAAGCATTGGTACACACAACGTTATTAGGACTATGGAAGAAATTTTCTAATTCTTTCTTAGGCTGGATCTCTCAATATATCACTCTGAGATTCTAATTTTGTATTTTAAGGGCTCTGCGTAATCTAATTTAAGCAAACATTTGTTATCCTGCTGTTTTTGTTTCTTATCGCATAATGTTTGAAGGCAGGAGGTTCCTCCGGTACTGTGTTTGGTTGGGACCTAAGGTGGCCACAGCAGCCTATTGTTCTCTCCGGAGTTGGGATTGGCGAAAGACCATCAAATCCAATTTCAGAAAGTGAAGTATGGGAGGTGCAGTTTGATTGTCATTTGCAGTCTTCAAATATTACCAGTATGTCCTCGTCGATGATGCCTGTTATGATGTGCTCTGAAGAAGGGATTCTTGCAGTCCTCGAGCCAGGTACATAATTAATATCCTGAAAAGAGAAGAATACATACTTCAAAAAAGTCTTTACCAAGTTTTTCTTCCGAAAATTTTGAATGTAGAAGTGACATTTCCACTTTGATTTTAGGAAATGGTCCTCCATCCCTAAATAATAGGCCACATTCTAAATTTAGTAAGAACTTTGAACGTTCTTATACTCCGTACTTCCCTTATGAATTATCTTAACTAATAATTCCTTAATTTAGGGAGTAATCCAACTAAATGTCAATTTTGATTTCATTTAAGAGTCGGGTAAAGCTCTTGGAACTTCAACCAGTCTAATTTTTGGCTGCTTTGCTTAATAGGTGCAGAACCATTTGAACTATTGGAAGAACCATGTGCCATCAACAGCTTTGACATTAACAAGCAGAATTACTCTGTAAGTGAGCTGTTTGGTAACAAACATTCAGTTGAAAGGGAGAACGTCCTGAGCATACATTGTAACAAACTGATTATCGCAGTCTAACCAAGTAACCATCTTTATATTGTCCTGCAGGATGTTATATGCAGTTTGGAATGGGAATCGCTGGCTATACTTTCAAGGTCGTAAAGCACTGTAATCACGGTCTAGTTTTGTTACAATTATTATGTAGCTTCAAGTACCAACATGCCGTAATATGTAAGATTGTATTCTACTAGCTAAACTGATGCCCTTTTGACCAGGTCTGTTTAACTGTACAGTTCATGACAAGTTCATATACACTATTCATGACAAGTTGCTTGATATGCTGAGCTGGGAAGTAACTTGTCAAATCTTTTTTCCAACCAAATATTGCTCTTGGTTCTCTTTTTATTCGCAACTAGATTAGGTCCTGTGCACGCACGGTTATTTGAAAATTATTAATTGATATTTTTTAATTAAAAT

mRNA sequence

GGCTTTTACTCCCAAAGTCACGTACATGAAGAACAAAGTTAGGTACAGTACCAATCTAAACAAAGTCACGTACTACTAAACCATCACTTCTGCACTCCCAAACCTTTCCCTAAACCCTCAAAAACCCTAACAATGGCTGTAAACCAATTCCAAACCCAGCAACACCAAAACCTCCAAATTCATCGTCTCCCCCAATCCAAATTCATCGATGCAGTACGTTGGCTACCTCCATTTGCCGCCTTCGACAAATTCATCGTTCTCTCTCTCTTTGACCCCACTTCCTCCTCTTCCACAATCGAACTCCACTCTCTCGATTTCCCTGATTCCGCAAACCCTAATCCCATCCTCTCTCCCCTCTCCACCTTCTCCTCCCCTTCTCTCTCTAGAACATCCTTTCTCAAAACCTCGCAATCCCTCATTGCCTTCTCCACATTCTCTGGCTCCCTCGATTTTCTCTCTCCTAATTACTCGTCTCCCGACGAGGTTTCTCTCGATTCGTTGCCTTCTTTGCAGGAGAAGGGGTTTCATGTTGGACCCATTTCGTGTATTGATGTTTTGGAGAGGGATTGTGTGAGTGTTGGAGAAGATGGGAGGGTTAATTTGGTGGGATTCGGGGACGGGAAGGCGAGTTATCGGCGGGTTTTCGATAGCGATGGGCTGGTTTCGTATTCGGCTGTGAAATGGGCGTCTCCCATGGAGTTTGCTACTGGTGGGTTGGGGTGTAGTCTTCAGTGGTGGGATCAGAGGAGGAAACCTGGGGAGCCTGCATTACAGTTTAAGGGCAAATGGTCTCAGAAAACTGCTTCTGGAGTTGTGCATTCCATCGATATTCATCCATCAAGAAAGCATACCTGTATGGCAGGAGGTTCCTCCGGTACTGTGTTTGGTTGGGACCTAAGGTGGCCACAGCAGCCTATTGTTCTCTCCGGAGTTGGGATTGGCGAAAGACCATCAAATCCAATTTCAGAAAGTGAAGTATGGGAGGTGCAGTTTGATTGTCATTTGCAGTCTTCAAATATTACCAGTATGTCCTCGTCGATGATGCCTGTTATGATGTGCTCTGAAGAAGGGATTCTTGCAGTCCTCGAGCCAGGTGCAGAACCATTTGAACTATTGGAAGAACCATGTGCCATCAACAGCTTTGACATTAACAAGCAGAATTACTCTGATGTTATATGCAGTTTGGAATGGGAATCGCTGGCTATACTTTCAAGGTCGTAAAGCACTGTAATCACGGTCTAGTTTTGTTACAATTATTATGTAGCTTCAAGTACCAACATGCCGTAATATGTAAGATTGTATTCTACTAGCTAAACTGATGCCCTTTTGACCAGGTCTGTTTAACTGTACAGTTCATGACAAGTTCATATACACTATTCATGACAAGTTGCTTGATATGCTGAGCTGGGAAGTAACTTGTCAAATCTTTTTTCCAACCAAATATTGCTCTTGGTTCTCTTTTTATTCGCAACTAGATTAGGTCCTGTGCACGCACGGTTATTTGAAAATTATTAATTGATATTTTTTAATTAAAAT

Coding sequence (CDS)

ATGGCTGTAAACCAATTCCAAACCCAGCAACACCAAAACCTCCAAATTCATCGTCTCCCCCAATCCAAATTCATCGATGCAGTACGTTGGCTACCTCCATTTGCCGCCTTCGACAAATTCATCGTTCTCTCTCTCTTTGACCCCACTTCCTCCTCTTCCACAATCGAACTCCACTCTCTCGATTTCCCTGATTCCGCAAACCCTAATCCCATCCTCTCTCCCCTCTCCACCTTCTCCTCCCCTTCTCTCTCTAGAACATCCTTTCTCAAAACCTCGCAATCCCTCATTGCCTTCTCCACATTCTCTGGCTCCCTCGATTTTCTCTCTCCTAATTACTCGTCTCCCGACGAGGTTTCTCTCGATTCGTTGCCTTCTTTGCAGGAGAAGGGGTTTCATGTTGGACCCATTTCGTGTATTGATGTTTTGGAGAGGGATTGTGTGAGTGTTGGAGAAGATGGGAGGGTTAATTTGGTGGGATTCGGGGACGGGAAGGCGAGTTATCGGCGGGTTTTCGATAGCGATGGGCTGGTTTCGTATTCGGCTGTGAAATGGGCGTCTCCCATGGAGTTTGCTACTGGTGGGTTGGGGTGTAGTCTTCAGTGGTGGGATCAGAGGAGGAAACCTGGGGAGCCTGCATTACAGTTTAAGGGCAAATGGTCTCAGAAAACTGCTTCTGGAGTTGTGCATTCCATCGATATTCATCCATCAAGAAAGCATACCTGTATGGCAGGAGGTTCCTCCGGTACTGTGTTTGGTTGGGACCTAAGGTGGCCACAGCAGCCTATTGTTCTCTCCGGAGTTGGGATTGGCGAAAGACCATCAAATCCAATTTCAGAAAGTGAAGTATGGGAGGTGCAGTTTGATTGTCATTTGCAGTCTTCAAATATTACCAGTATGTCCTCGTCGATGATGCCTGTTATGATGTGCTCTGAAGAAGGGATTCTTGCAGTCCTCGAGCCAGGTGCAGAACCATTTGAACTATTGGAAGAACCATGTGCCATCAACAGCTTTGACATTAACAAGCAGAATTACTCTGATGTTATATGCAGTTTGGAATGGGAATCGCTGGCTATACTTTCAAGGTCGTAA

Protein sequence

MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSLDFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSLDSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYSAVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHTCMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMSSSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILSRS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo06061	Spo06061	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo06061.1	Spo06061.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06061.1.utr5p.1	Spo06061.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06061.1.CDS.5	Spo06061.1.CDS.5	CDS
Spo06061.1.CDS.4	Spo06061.1.CDS.4	CDS
Spo06061.1.CDS.3	Spo06061.1.CDS.3	CDS
Spo06061.1.CDS.2	Spo06061.1.CDS.2	CDS
Spo06061.1.CDS.1	Spo06061.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06061.1.utr3p.1	Spo06061.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06061.1.exon.5	Spo06061.1.exon.5	exon
Spo06061.1.exon.4	Spo06061.1.exon.4	exon
Spo06061.1.exon.3	Spo06061.1.exon.3	exon
Spo06061.1.exon.2	Spo06061.1.exon.2	exon
Spo06061.1.exon.1	Spo06061.1.exon.1	exon

Homology

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BLAST of Spo06061.1 vs. NCBI nr
Match: gi|902177012|gb|KNA08872.1| (hypothetical protein SOVF_158500 [Spinacia oleracea])

HSP 1 Score: 733.0 bits (1891), Expect = 2.500e-208
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1


		  
Query: 1   MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL 60
           MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL
Sbjct: 1   MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL 60

Query: 61  DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL 120
           DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL
Sbjct: 61  DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL 120

Query: 121 DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS 180
           DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS
Sbjct: 121 DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS 180

Query: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT 240
           AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT
Sbjct: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT 240

Query: 241 CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS 300
           CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS
Sbjct: 241 CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS 300

Query: 301 SSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILS 360
           SSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILS
Sbjct: 301 SSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILS 360

Query: 361 RS 363
           RS
Sbjct: 361 RS 362

[Close]

BLAST of Spo06061.1 vs. NCBI nr
Match: gi|731352939|ref|XP_010687804.1| (PREDICTED: nuclear pore complex protein NUP43 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 622.5 bits (1604), Expect = 4.700e-175
Identity = 307/363 (84.57%), Postives = 332/363 (91.46%), Query Frame = 1


		  
Query: 1   MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL 60
           MAV Q QTQ H N QIHRLPQSK+IDAVRWLPPF+AFDKF+V SLFDP SSSS IE+HSL
Sbjct: 1   MAVIQSQTQHHHNFQIHRLPQSKYIDAVRWLPPFSAFDKFVVFSLFDPDSSSSAIEIHSL 60

Query: 61  DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL 120
           +F +S NP PILSPLS  SSPSLSRTS LKTSQSLIAFSTFSGSL+FLSPNYSS  EVSL
Sbjct: 61  EFTNSQNPKPILSPLS--SSPSLSRTSSLKTSQSLIAFSTFSGSLNFLSPNYSSSGEVSL 120

Query: 121 DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS 180
           +S   LQ+  FHVGPISCIDVLER+CVSVGEDGRVNLV FG GKA++RRVFDS+GLVSY+
Sbjct: 121 NSSLFLQDNDFHVGPISCIDVLERECVSVGEDGRVNLVNFGGGKANHRRVFDSNGLVSYT 180

Query: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT 240
           AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFK  W QK ASGVVHSIDIHPSRKHT
Sbjct: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKNNWPQKAASGVVHSIDIHPSRKHT 240

Query: 241 CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS 300
           CMAGGSSGTVF WDLRWPQQPI+LSG+GIGERP+NPISESEVWEVQFDCHL+SSNI SMS
Sbjct: 241 CMAGGSSGTVFAWDLRWPQQPIILSGIGIGERPANPISESEVWEVQFDCHLESSNIASMS 300

Query: 301 SS-MMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAIL 360
           +S ++PVMMCSEEGILAVLEPGAEP ELLEEPCAINSFDI+KQNYSD+ICSLEWES+AI+
Sbjct: 301 ASRVLPVMMCSEEGILAVLEPGAEPIELLEEPCAINSFDIDKQNYSDIICSLEWESIAII 360

Query: 361 SRS 363
           SRS
Sbjct: 361 SRS 361

[Close]

BLAST of Spo06061.1 vs. NCBI nr
Match: gi|870851446|gb|KMT03493.1| (hypothetical protein BVRB_8g191730 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 622.5 bits (1604), Expect = 4.700e-175
Identity = 307/363 (84.57%), Postives = 332/363 (91.46%), Query Frame = 1


		  
Query: 1   MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL 60
           MAV Q QTQ H N QIHRLPQSK+IDAVRWLPPF+AFDKF+V SLFDP SSSS IE+HSL
Sbjct: 1   MAVIQSQTQHHHNFQIHRLPQSKYIDAVRWLPPFSAFDKFVVFSLFDPDSSSSAIEIHSL 60

Query: 61  DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL 120
           +F +S NP PILSPLS  SSPSLSRTS LKTSQSLIAFSTFSGSL+FLSPNYSS  EVSL
Sbjct: 61  EFTNSQNPKPILSPLS--SSPSLSRTSSLKTSQSLIAFSTFSGSLNFLSPNYSSSGEVSL 120

Query: 121 DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS 180
           +S   LQ+  FHVGPISCIDVLER+CVSVGEDGRVNLV FG GKA++RRVFDS+GLVSY+
Sbjct: 121 NSSLFLQDNDFHVGPISCIDVLERECVSVGEDGRVNLVNFGGGKANHRRVFDSNGLVSYT 180

Query: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT 240
           AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFK  W QK ASGVVHSIDIHPSRKHT
Sbjct: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKNNWPQKAASGVVHSIDIHPSRKHT 240

Query: 241 CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS 300
           CMAGGSSGTVF WDLRWPQQPI+LSG+GIGERP+NPISESEVWEVQFDCHL+SSNI SMS
Sbjct: 241 CMAGGSSGTVFAWDLRWPQQPIILSGIGIGERPANPISESEVWEVQFDCHLESSNIASMS 300

Query: 301 SS-MMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAIL 360
           +S ++PVMMCSEEGILAVLEPGAEP ELLEEPCAINSFDI+KQNYSD+ICSLEWES+AI+
Sbjct: 301 ASRVLPVMMCSEEGILAVLEPGAEPIELLEEPCAINSFDIDKQNYSDIICSLEWESIAII 360

Query: 361 SRS 363
           SRS
Sbjct: 361 SRS 361

[Close]

BLAST of Spo06061.1 vs. NCBI nr
Match: gi|694323444|ref|XP_009352790.1| (PREDICTED: uncharacterized protein LOC103944108 [Pyrus x bretschneideri])

HSP 1 Score: 421.4 bits (1082), Expect = 1.600e-114
Identity = 222/354 (62.71%), Postives = 268/354 (75.71%), Query Frame = 1


		  
Query: 15  QIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSLDFPDSANPNPI-LS 74
           QIHRLPQSK++D+VRWLPP +A D+  V+++FD  S SS++E HS        PNP  L+
Sbjct: 8   QIHRLPQSKYLDSVRWLPPLSALDRLAVIAVFDSDSDSSSVETHSF------TPNPATLT 67

Query: 75  PLSTFSSPSLSRTSFLKTSQS----LIAFSTFSGSLDFLSPNYSSPDEVSLDSLPSLQEK 134
           P S + SPS  R S LKTSQS    L+A +TFSGSL  L  +  S D   L S  S+ EK
Sbjct: 68  PQSQWVSPS--RISSLKTSQSHHKPLVAAATFSGSLHILYGD--SMDPAYLQSELSVPEK 127

Query: 135 GFHVGPISCIDVLE--RDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYSAVKWASP 194
             H GPISC+DV++   +CVSVGEDGRVNLV  GD + SYRRVFDS GLVS++A KWASP
Sbjct: 128 ELHEGPISCVDVMDGGSECVSVGEDGRVNLVSLGDSELSYRRVFDSSGLVSFTAAKWASP 187

Query: 195 MEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHTCMAGGSS 254
            EFATGG G SLQWWDQR++ G  + QFKG WSQ +  G+VHSIDIHPSRKHTC+AGGS 
Sbjct: 188 SEFATGGYGFSLQWWDQRKRGGAVS-QFKGGWSQPSTPGIVHSIDIHPSRKHTCLAGGSL 247

Query: 255 GTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMSSSMMPVM 314
           GTVF WDLRWPQQPI+LSGVG GE   +P  ESEVWEVQ+D + +SSN+ ++SS ++P M
Sbjct: 248 GTVFAWDLRWPQQPILLSGVGAGEATHSPC-ESEVWEVQYDHYAKSSNVGNVSSRILPTM 307

Query: 315 MCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILSR 362
           +CSE+GILAV+E G EP ELL EPCAINSFDI++Q  SDVICSLEWES+AIL+R
Sbjct: 308 ICSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQYPSDVICSLEWESIAILTR 349

[Close]

BLAST of Spo06061.1 vs. NCBI nr
Match: gi|225445772|ref|XP_002273237.1| (PREDICTED: nuclear pore complex protein NUP43 [Vitis vinifera])

HSP 1 Score: 419.5 bits (1077), Expect = 6.100e-114
Identity = 224/355 (63.10%), Postives = 269/355 (75.77%), Query Frame = 1


		  
Query: 13  NLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL--DFPDSANPNP 72
           +LQIHRLPQS++IDAVR+LP F+  D+F VL+LFD  SSS ++++HSL    P S N   
Sbjct: 11  SLQIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSLPKSTPPSLNLQS 70

Query: 73  ILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSLDSLPSLQEKG 132
            LS  S  SS SLS    L   + LIA STFSGSL  L  ++    + S+ S  S+ EK 
Sbjct: 71  SLSLSSRVSSLSLS----LSAHKPLIAASTFSGSLHILLLDF----DASVQSEFSVPEKS 130

Query: 133 FHVGPISCIDVLER--DCVSVGEDGRVNLVGFGDG-KASYRRVFDSDGLVSYSAVKWASP 192
            HVG ISC+D+ E   +CVSVGEDGRVNLV FGDG + SYRRV+DSDGLVSY+A KWASP
Sbjct: 131 LHVGAISCVDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASP 190

Query: 193 MEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHTCMAGGSS 252
            EFATGG G  LQWWD  RKPG P  QFKG W+Q+T SG+VHSIDIHPSRKHTC+AGGS 
Sbjct: 191 TEFATGGFGFGLQWWD-LRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSL 250

Query: 253 GTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMSSS-MMPV 312
           GTVF WDLRW QQPI+LSGVG  E  ++   ESEVWEV++D ++++SN  +MSSS ++P 
Sbjct: 251 GTVFAWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPA 310

Query: 313 MMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILSR 362
           M+CSE+GILAV+E G EP ELL EPCAINSFDI++QN SDVICSLEWES+AILSR
Sbjct: 311 MLCSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356

[Close]

BLAST of Spo06061.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QNQ0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_158500 PE=4 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 1.700e-208
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 1


		  
Query: 1   MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL 60
           MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL
Sbjct: 1   MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL 60

Query: 61  DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL 120
           DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL
Sbjct: 61  DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL 120

Query: 121 DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS 180
           DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS
Sbjct: 121 DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS 180

Query: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT 240
           AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT
Sbjct: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT 240

Query: 241 CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS 300
           CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS
Sbjct: 241 CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS 300

Query: 301 SSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILS 360
           SSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILS
Sbjct: 301 SSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILS 360

Query: 361 RS 363
           RS
Sbjct: 361 RS 362

[Close]

BLAST of Spo06061.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BU93_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g191730 PE=4 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 3.300e-175
Identity = 307/363 (84.57%), Postives = 332/363 (91.46%), Query Frame = 1


		  
Query: 1   MAVNQFQTQQHQNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL 60
           MAV Q QTQ H N QIHRLPQSK+IDAVRWLPPF+AFDKF+V SLFDP SSSS IE+HSL
Sbjct: 1   MAVIQSQTQHHHNFQIHRLPQSKYIDAVRWLPPFSAFDKFVVFSLFDPDSSSSAIEIHSL 60

Query: 61  DFPDSANPNPILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSL 120
           +F +S NP PILSPLS  SSPSLSRTS LKTSQSLIAFSTFSGSL+FLSPNYSS  EVSL
Sbjct: 61  EFTNSQNPKPILSPLS--SSPSLSRTSSLKTSQSLIAFSTFSGSLNFLSPNYSSSGEVSL 120

Query: 121 DSLPSLQEKGFHVGPISCIDVLERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYS 180
           +S   LQ+  FHVGPISCIDVLER+CVSVGEDGRVNLV FG GKA++RRVFDS+GLVSY+
Sbjct: 121 NSSLFLQDNDFHVGPISCIDVLERECVSVGEDGRVNLVNFGGGKANHRRVFDSNGLVSYT 180

Query: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHT 240
           AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFK  W QK ASGVVHSIDIHPSRKHT
Sbjct: 181 AVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKNNWPQKAASGVVHSIDIHPSRKHT 240

Query: 241 CMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMS 300
           CMAGGSSGTVF WDLRWPQQPI+LSG+GIGERP+NPISESEVWEVQFDCHL+SSNI SMS
Sbjct: 241 CMAGGSSGTVFAWDLRWPQQPIILSGIGIGERPANPISESEVWEVQFDCHLESSNIASMS 300

Query: 301 SS-MMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAIL 360
           +S ++PVMMCSEEGILAVLEPGAEP ELLEEPCAINSFDI+KQNYSD+ICSLEWES+AI+
Sbjct: 301 ASRVLPVMMCSEEGILAVLEPGAEPIELLEEPCAINSFDIDKQNYSDIICSLEWESIAII 360

Query: 361 SRS 363
           SRS
Sbjct: 361 SRS 361

[Close]

BLAST of Spo06061.1 vs. UniProtKB/TrEMBL
Match: D7U1G4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00820 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 4.200e-114
Identity = 224/355 (63.10%), Postives = 269/355 (75.77%), Query Frame = 1


		  
Query: 13  NLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSL--DFPDSANPNP 72
           +LQIHRLPQS++IDAVR+LP F+  D+F VL+LFD  SSS ++++HSL    P S N   
Sbjct: 11  SLQIHRLPQSQYIDAVRFLPAFSGLDRFAVLALFDTHSSSPSLQIHSLPKSTPPSLNLQS 70

Query: 73  ILSPLSTFSSPSLSRTSFLKTSQSLIAFSTFSGSLDFLSPNYSSPDEVSLDSLPSLQEKG 132
            LS  S  SS SLS    L   + LIA STFSGSL  L  ++    + S+ S  S+ EK 
Sbjct: 71  SLSLSSRVSSLSLS----LSAHKPLIAASTFSGSLHILLLDF----DASVQSEFSVPEKS 130

Query: 133 FHVGPISCIDVLER--DCVSVGEDGRVNLVGFGDG-KASYRRVFDSDGLVSYSAVKWASP 192
            HVG ISC+D+ E   +CVSVGEDGRVNLV FGDG + SYRRV+DSDGLVSY+A KWASP
Sbjct: 131 LHVGAISCVDLQESGVECVSVGEDGRVNLVAFGDGSRLSYRRVWDSDGLVSYTAAKWASP 190

Query: 193 MEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHTCMAGGSS 252
            EFATGG G  LQWWD  RKPG P  QFKG W+Q+T SG+VHSIDIHPSRKHTC+AGGS 
Sbjct: 191 TEFATGGFGFGLQWWD-LRKPGGPVSQFKGNWAQRTTSGIVHSIDIHPSRKHTCLAGGSL 250

Query: 253 GTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMSSS-MMPV 312
           GTVF WDLRW QQPI+LSGVG  E  ++   ESEVWEV++D ++++SN  +MSSS ++P 
Sbjct: 251 GTVFAWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPA 310

Query: 313 MMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILSR 362
           M+CSE+GILAV+E G EP ELL EPCAINSFDI++QN SDVICSLEWES+AILSR
Sbjct: 311 MLCSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIAILSR 356

[Close]

BLAST of Spo06061.1 vs. UniProtKB/TrEMBL
Match: M5XD93_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007862mg PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 8.800e-112
Identity = 217/354 (61.30%), Postives = 263/354 (74.29%), Query Frame = 1


		  
Query: 15  QIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSLDFPDSANPNPILSP 74
           QIHRL QSK+IDAVRWLPP +A D+  V+++FD  S S+ IE HS   PD  N    L+ 
Sbjct: 11  QIHRLRQSKYIDAVRWLPPLSALDRLAVIAVFDSDSDSAAIETHSFA-PDPEN----LTQ 70

Query: 75  LSTFSSPSLSRTSFLKTSQS----LIAFSTFSGSLDFLSPNYSSPDEVSLDSLPSLQEKG 134
            S + SPS  R S LKTSQS     +A +T +GS+  L  +  S D  SL+S   + EK 
Sbjct: 71  QSQWFSPS--RISSLKTSQSHHKPFVAAATLAGSIHILFGD--SMDPASLESELLMPEKA 130

Query: 135 FHVGPISCIDVLER--DCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYSAVKWASPM 194
            H GPISC+D+++   +CVSVGEDGRVNLV  G+ + SY+R+FDS GLVS++  KWASP 
Sbjct: 131 LHEGPISCVDIMDGGVECVSVGEDGRVNLVSVGESELSYQRIFDSSGLVSFTTAKWASPS 190

Query: 195 EFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHTCMAGGSSG 254
           EFATGG G SLQWWDQR KPG    QFKG WSQ+T  G+VHSIDIHPSRKHTC+AGGS G
Sbjct: 191 EFATGGYGFSLQWWDQR-KPGAAVSQFKGSWSQRTTPGIVHSIDIHPSRKHTCLAGGSLG 250

Query: 255 TVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMSSSMMPVMM 314
           TVF WDLRWPQQPI+LSGVG GE   +P  ESEVWEV FD + +SSN+ ++SS ++P M+
Sbjct: 251 TVFAWDLRWPQQPILLSGVGAGETTHSP-CESEVWEVHFDHYAKSSNVGNVSSRILPTMI 310

Query: 315 CSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILSRS 363
           CSE+GILAV+E G EP ELL EPCAINSFDI++Q  SDVICSLEWES+AIL+RS
Sbjct: 311 CSEDGILAVVEQGEEPVELLAEPCAINSFDIDRQYPSDVICSLEWESIAILTRS 353

[Close]

BLAST of Spo06061.1 vs. UniProtKB/TrEMBL
Match: A0A164X107_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_020091 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 8.300e-110
Identity = 217/358 (60.61%), Postives = 263/358 (73.46%), Query Frame = 1


		  
Query: 12  QNLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSLDFPDSANPNPI 71
           + LQIHR+PQS +IDAVRWLPP + F++FI+L++ D  S +S +E+ +L+    +NP+ I
Sbjct: 7   ETLQIHRIPQSTYIDAVRWLPPLSVFERFILLAVSDSNSDASLLEIRALN---RSNPS-I 66

Query: 72  LSPLSTFSSPSLSRTSFLKTSQS----LIAFSTFSGSLDFLSPNYSSPDEVSLDSLPSL- 131
           L+PLS+    S  RTS LK  Q+    LIA S+FSGS+ FL   +    EV  D    + 
Sbjct: 67  LTPLSSLQLAS--RTSSLKVCQTPHKPLIAASSFSGSVRFL---FVDNVEVGFDGSEHIV 126

Query: 132 QEKGFHVGPISCIDV--LERDCVSVGEDGRVNLVGFGDGKASYRRVFDSDGLVSYSAVKW 191
            EK  HVGPISCID+   E +CVSVGEDGRV LV  G+G+ S R+VFDS GLVSYSAVKW
Sbjct: 127 PEKSLHVGPISCIDLGGNELECVSVGEDGRVGLVSVGEGELSVRKVFDSAGLVSYSAVKW 186

Query: 192 ASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRKHTCMAG 251
           ASP EF TGGLG S+QWWD R KPG    QFKG W Q  +SG+VHSIDIHPSRKHTC+AG
Sbjct: 187 ASPTEFVTGGLGFSVQWWDLR-KPGAAVSQFKGNWDQGASSGIVHSIDIHPSRKHTCLAG 246

Query: 252 GSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITSMSSSMM 311
           GSSGTVF WD+RWPQQPIVLSG G     +  +S SEVWEVQ+D   +SSN    S+ ++
Sbjct: 247 GSSGTVFTWDIRWPQQPIVLSGAGQDAASARSLSASEVWEVQYDTFTRSSNHRISSTRVL 306

Query: 312 PVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAILSRS 363
           PVMMCSE+GILAV E G EP ELL EPCAIN FDI++QN SDVICS+EWES+AILSR+
Sbjct: 307 PVMMCSEDGILAVTEEGEEPIELLVEPCAINCFDIDRQNPSDVICSMEWESVAILSRA 354

[Close]

BLAST of Spo06061.1 vs. ExPASy Swiss-Prot
Match: NUP43_ARATH (Nuclear pore complex protein NUP43 OS=Arabidopsis thaliana GN=NUP43 PE=1 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 9.400e-99
Identity = 193/363 (53.17%), Postives = 255/363 (70.25%), Query Frame = 1


		  
Query: 13  NLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSLDFPD---SANPN 72
           + Q+HR+PQSK++D VRWLP  +A ++F   + +D    SS+IE+ SLD P+   + N N
Sbjct: 7   SFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLD-PNPRGNHNTN 66

Query: 73  PILSPLSTFSSPSLSRTSFLKTS---------QSLIAFSTFSGSLDFLSPNYSSPDEVSL 132
           P++  LS+++SPS  R S L+ +         + +++ +T SGSL  L  +    +  ++
Sbjct: 67  PLIESLSSWTSPS--RVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLV--EGAAI 126

Query: 133 DSLPSLQEKGFHVGPISCIDVLER-DCVSVGEDGRVNLVGFGDGKA-SYRRVFDSDGLVS 192
           +   + + + FHVG +  +D  E  +CV+VGEDGRVN+V   +G+   YR+VFD +GLV+
Sbjct: 127 EEFYAAEGERFHVGRVEGVDWREGGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVA 186

Query: 193 YSAVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRK 252
           Y AVKWASP EF TGG G  LQ WDQR K GE   Q KG W Q   S +VHSIDIHPSRK
Sbjct: 187 YRAVKWASPTEFVTGGYGFGLQLWDQR-KSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRK 246

Query: 253 HTCMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITS 312
           HTC+AGGSSGTVF WDLRWPQQPIVLSGVG  E  +NP+SESEVWEVQ+D + + SN++ 
Sbjct: 247 HTCIAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTK-SNVS- 306

Query: 313 MSSSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAI 362
            SS ++PVM CSE+GIL ++E G EP ELL EPCAINSFDI++QN  DVICSLEWES+A+
Sbjct: 307 -SSRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAV 360

[Close]

BLAST of Spo06061.1 vs. TAIR (Arabidopsis)
Match: AT4G30840.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 361.7 bits (927), Expect = 5.300e-100
Identity = 193/363 (53.17%), Postives = 255/363 (70.25%), Query Frame = 1


		  
Query: 13  NLQIHRLPQSKFIDAVRWLPPFAAFDKFIVLSLFDPTSSSSTIELHSLDFPD---SANPN 72
           + Q+HR+PQSK++D VRWLP  +A ++F   + +D    SS+IE+ SLD P+   + N N
Sbjct: 7   SFQVHRIPQSKYVDGVRWLPQASALNRFFATASYDADCDSSSIEIQSLD-PNPRGNHNTN 66

Query: 73  PILSPLSTFSSPSLSRTSFLKTS---------QSLIAFSTFSGSLDFLSPNYSSPDEVSL 132
           P++  LS+++SPS  R S L+ +         + +++ +T SGSL  L  +    +  ++
Sbjct: 67  PLIESLSSWTSPS--RVSSLEVAGNGGGGGSFKPMVSAATSSGSLHVLMIDLV--EGAAI 126

Query: 133 DSLPSLQEKGFHVGPISCIDVLER-DCVSVGEDGRVNLVGFGDGKA-SYRRVFDSDGLVS 192
           +   + + + FHVG +  +D  E  +CV+VGEDGRVN+V   +G+   YR+VFD +GLV+
Sbjct: 127 EEFYAAEGERFHVGRVEGVDWREGGECVTVGEDGRVNVVKIVNGEGLRYRKVFDGNGLVA 186

Query: 193 YSAVKWASPMEFATGGLGCSLQWWDQRRKPGEPALQFKGKWSQKTASGVVHSIDIHPSRK 252
           Y AVKWASP EF TGG G  LQ WDQR K GE   Q KG W Q   S +VHSIDIHPSRK
Sbjct: 187 YRAVKWASPTEFVTGGYGFGLQLWDQR-KSGEAVSQLKGNWFQGKTSAIVHSIDIHPSRK 246

Query: 253 HTCMAGGSSGTVFGWDLRWPQQPIVLSGVGIGERPSNPISESEVWEVQFDCHLQSSNITS 312
           HTC+AGGSSGTVF WDLRWPQQPIVLSGVG  E  +NP+SESEVWEVQ+D + + SN++ 
Sbjct: 247 HTCIAGGSSGTVFAWDLRWPQQPIVLSGVGASENINNPLSESEVWEVQYDSYTK-SNVS- 306

Query: 313 MSSSMMPVMMCSEEGILAVLEPGAEPFELLEEPCAINSFDINKQNYSDVICSLEWESLAI 362
            SS ++PVM CSE+GIL ++E G EP ELL EPCAINSFDI++QN  DVICSLEWES+A+
Sbjct: 307 -SSRILPVMTCSEDGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIAV 360

The following BLAST results are available for this feature:

BLAST of Spo06061.1 vs. NCBI nr
BLAST of Spo06061.1 vs. UniProtKB/TrEMBL
BLAST of Spo06061.1 vs. ExPASy Swiss-Prot
BLAST of Spo06061.1 vs. TAIR (Arabidopsis)

BLAST of Spo06061.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902177012\|gb\|KNA08872.1\|	2.5e-208	100.	hypothetical protein SOVF_1585...	[more]
gi\|731352939\|ref\|XP_010687804.1\|	4.7e-175	84.5	PREDICTED: nuclear pore comple...	[more]
gi\|870851446\|gb\|KMT03493.1\|	4.7e-175	84.5	hypothetical protein BVRB_8g19...	[more]
gi\|694323444\|ref\|XP_009352790.1\|	1.6e-114	62.7	PREDICTED: uncharacterized pro...	[more]
gi\|225445772\|ref\|XP_002273237.1\|	6.1e-114	63.1	PREDICTED: nuclear pore comple...	[more]

BLAST of Spo06061.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QNQ0_SPIOL	1.7e-208	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BU93_BETVU	3.3e-175	84.5	Uncharacterized protein OS=Bet...	[more]
D7U1G4_VITVI	4.2e-114	63.1	Putative uncharacterized prote...	[more]
M5XD93_PRUPE	8.8e-112	61.3	Uncharacterized protein OS=Pru...	[more]
A0A164X107_DAUCA	8.3e-110	60.6	Uncharacterized protein OS=Dau...	[more]

BLAST of Spo06061.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
NUP43_ARATH	9.4e-99	53.1	Nuclear pore complex protein N...	[more]

BLAST of Spo06061.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT4G30840.1	5.3e-100	53.1	Transducin/WD40 repeat-like su...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 126..264 score: 5.
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 60..300 score: 1.35
None	No IPR available	PANTHER	PTHR22652	NUCLEOPORIN NUP43	coord: 11..361 score: 1.4
None	No IPR available	PANTHER	PTHR22652:SF0	NUCLEOPORIN NUP43	coord: 11..361 score: 1.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding