Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTAGTCAAGTTAACTTCACCCGATTCGTGAGCTTGTTAGTTGTTAGGTAGAATCCGAATGACGGAATGAGTAATGACGGATTCCCCAACAATGACCAGGTATTGGCAATTTGACCGTAGCGCAAGTCTTAAACCGCTTCTGCCAAAAAGTCAAAAAGCAAAAACTAAAACGGGAGGGAGAGAGATTGAAGATGACAACCATAGAAACTTGGATAAACAACCATGAATCAGTTTACAAAGCAGCAACTCGTCACTCTTTTATAATCTCCATCCGTCATGGTTCCGTCGATCTCTCCTCTTTCAAACGCTGGCTGGTTTGTCCTTTTCATCTTTTACCAATTGAACTTGTTTAATTTTATGGTGTATTATATACCCGCAAACATAACGACGTAGACGAGATTCAATCTCATGTTTTAGGTATTACCCGAGACTTTAACTGCCTAAGCAAATTGAATAATTTAATGTTTTGTATGTTTTATATCTGCTGATCAATTTGGAACAGTGGGATTAAAATTTTCAAAACTAATACTGGGTTGATTAGTAGTTGATATTGTGTACGAATTGAATGATCTGGGTTCGAATTGGTTTCAATATTCATATTGTTGGAATCAGAATATGTTTGATGTAACAAATGTGGCCGTTTGTTTAGGAACAAGAGACTAATTTGTTACTCCCTCCGTGTTCTTTTTGTTAATAAGTGCATTGTTTTGGGTGATGCACTTATTTAAAAACAGTTGATTATGGAAAGTTTGTTAAAAGATGGAGGAATATTCCGTAAATCCTAACAGCAGATACGGTATAAGAAACCCTTCTGAAACACTGTCAGGAAATTGACAGTTGATTTTTGATGCAGGAAATACTATGGCAACAGTTTAATCCAGTAATCTGTGTCTTTCCTCGGTCAATTATGAGATTTCTAATTTCATTGAGAACTTTTATTAGTAGTTGTTAGAGCAACTTTGAGGATGAAACATAGTTTCTTTGTACTTACCAATCATGGTTGTTTTGAAATTTTCTAAGTGCAATTCAGGGGATTTTACCTAAAATGAAGTTGTTTTTCGGTAGAGCTTATTTGAACTTAGAGAGCCTATGGACTTATTGCCCTTTATCCAAACTCTTACATTCCTTGAACTTTTGCAAGGCGAAGAGAACAATGCCCCAACATACTAGCATAGCCTCCAAAAGATGCTCACCACATAGTGTGCCTCCTTAACATACTGCTGTCTGCACTAGCTAGGTTGTATTTCTGTGATAATGCATATGGTATTAATCGGAAGTATTCATTATCTTCTCTGCTTCAAATACAGGGTCAGGACTACTTATTTGTCAGGAAATTTGTTCCTTTTGTCGGTAGTGTGCTGGTGAAAGCTTGTAAGGAATCAGATGATGAATCAGATATGGAGGTTATTTTATCTGGTTTGGCTTCTCTGAATGACGAAATTTCCTGGTTTAAGAAAGAAGCTGCAAAATGGGATGTTCAGCTCAGTGCCATCACCCCTCTGCAGACAAACCAGAACTACTGCAGGTAACATATACTACGTTTGTTAAACTGTTAAAAAAATACTCGTAACACAAAGGATTATCCAGAGAAAATGATGAATGTGTAGAAAGATAACATGGTTAGATGATCTTTATTAAGACTCAATCGTGAACACATTCTATGATTATTTGTCAGTTGTTAGGTCCAAGTATTCATAGCAAAACCTTACTGTAATCATGAATAGCAGAATGAAATTATTTTTCAGCATTACACCTTATGTTTATTGTCGTATGCTTACCAATGTGCTCAACATTTAGGTTCTTAGAAAGCCTGATGCAACCAGATGTCAGTTACGCCGTTGCAATCACAGCCTTCTGGGCAATTGAGGCTGTTTACCAAATGAGCTTTGCCCACTGCCTCGAAGATGATGCCAAAACTCCTTCAGAACTCAGAGAAGTGTGTGAGAGATGGGGGAATGAAGGGTTTGGTAAGTATTGTGACTCCCTGAAGAAGATTGCTAACCGATGTCTATCAAAGGGATCAAATGATGTGCAAGTCAAAGCCGAGGCCATGCTTTTGCAAGTTCTTGAACTAGAAGTCGAGTTCTGGAGTATGAGTGATGGACAGATCAATTAGAAACAGAAAGTACTGTGTTTTGGTTGTGATTTCTTGTATGTTTTAAAGTTTTGCTCTATCAATCTTATGCTTTTCAGATTTACTGGATTAAAAACTGGGTTTCCAAGCATTTTGTAAATGTTTGGAACAAGGCAGAAATCGCAACGATACAAGTAAAACTGTAAAATTACCACTTAATAGTTAATACTAATATATCAGGGTCAAATTATCATTTCTTGTACATGTGCTACTTCATAAGACAATTCAGCTTACAAAAGTAGAAGAGAAGCATGCCATTCAGGTTTTCTGTACAGTTTCTGATGCAGAAGCGCAAAAATACAGCGCGATTAAATAGTTTCTGGACACA TTTCTAGTCAAGTTAACTTCACCCGATTCGTGAGCTTGTTAGTTGTTAGGTAGAATCCGAATGACGGAATGAGTAATGACGGATTCCCCAACAATGACCAGGTATTGGCAATTTGACCGTAGCGCAAGTCTTAAACCGCTTCTGCCAAAAAGTCAAAAAGCAAAAACTAAAACGGGAGGGAGAGAGATTGAAGATGACAACCATAGAAACTTGGATAAACAACCATGAATCAGTTTACAAAGCAGCAACTCGTCACTCTTTTATAATCTCCATCCGTCATGGTTCCGTCGATCTCTCCTCTTTCAAACGCTGGCTGGGTCAGGACTACTTATTTGTCAGGAAATTTGTTCCTTTTGTCGGTAGTGTGCTGGTGAAAGCTTGTAAGGAATCAGATGATGAATCAGATATGGAGGTTATTTTATCTGGTTTGGCTTCTCTGAATGACGAAATTTCCTGGTTTAAGAAAGAAGCTGCAAAATGGGATGTTCAGCTCAGTGCCATCACCCCTCTGCAGACAAACCAGAACTACTGCAGGTTCTTAGAAAGCCTGATGCAACCAGATGTCAGTTACGCCGTTGCAATCACAGCCTTCTGGGCAATTGAGGCTGTTTACCAAATGAGCTTTGCCCACTGCCTCGAAGATGATGCCAAAACTCCTTCAGAACTCAGAGAAGTGTGTGAGAGATGGGGGAATGAAGGGTTTGGTAAGTATTGTGACTCCCTGAAGAAGATTGCTAACCGATGTCTATCAAAGGGATCAAATGATGTGCAAGTCAAAGCCGAGGCCATGCTTTTGCAAGTTCTTGAACTAGAAGTCGAGTTCTGGAGTATGAGTGATGGACAGATCAATTAGAAACAGAAAGTACTGTGTTTTGGTTGTGATTTCTTGTATGTTTTAAAGTTTTGCTCTATCAATCTTATGCTTTTCAGATTTACTGGATTAAAAACTGGGTTTCCAAGCATTTTGTAAATGTTTGGAACAAGGCAGAAATCGCAACGATACAAGTAAAACTGTAAAATTACCACTTAATAGTTAATACTAATATATCAGGGTCAAATTATCATTTCTTGTACATGTGCTACTTCATAAGACAATTCAGCTTACAAAAGTAGAAGAGAAGCATGCCATTCAGGTTTTCTGTACAGTTTCTGATGCAGAAGCGCAAAAATACAGCGCGATTAAATAGTTTCTGGACACA ATGACAACCATAGAAACTTGGATAAACAACCATGAATCAGTTTACAAAGCAGCAACTCGTCACTCTTTTATAATCTCCATCCGTCATGGTTCCGTCGATCTCTCCTCTTTCAAACGCTGGCTGGGTCAGGACTACTTATTTGTCAGGAAATTTGTTCCTTTTGTCGGTAGTGTGCTGGTGAAAGCTTGTAAGGAATCAGATGATGAATCAGATATGGAGGTTATTTTATCTGGTTTGGCTTCTCTGAATGACGAAATTTCCTGGTTTAAGAAAGAAGCTGCAAAATGGGATGTTCAGCTCAGTGCCATCACCCCTCTGCAGACAAACCAGAACTACTGCAGGTTCTTAGAAAGCCTGATGCAACCAGATGTCAGTTACGCCGTTGCAATCACAGCCTTCTGGGCAATTGAGGCTGTTTACCAAATGAGCTTTGCCCACTGCCTCGAAGATGATGCCAAAACTCCTTCAGAACTCAGAGAAGTGTGTGAGAGATGGGGGAATGAAGGGTTTGGTAAGTATTGTGACTCCCTGAAGAAGATTGCTAACCGATGTCTATCAAAGGGATCAAATGATGTGCAAGTCAAAGCCGAGGCCATGCTTTTGCAAGTTCTTGAACTAGAAGTCGAGTTCTGGAGTATGAGTGATGGACAGATCAATTAG MTTIETWINNHESVYKAATRHSFIISIRHGSVDLSSFKRWLGQDYLFVRKFVPFVGSVLVKACKESDDESDMEVILSGLASLNDEISWFKKEAAKWDVQLSAITPLQTNQNYCRFLESLMQPDVSYAVAITAFWAIEAVYQMSFAHCLEDDAKTPSELREVCERWGNEGFGKYCDSLKKIANRCLSKGSNDVQVKAEAMLLQVLELEVEFWSMSDGQIN Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo06148.1 vs. NCBI nr
Match: gi|902233933|gb|KNA23257.1| (hypothetical protein SOVF_026390 [Spinacia oleracea]) HSP 1 Score: 447.2 bits (1149), Expect = 1.600e-122 Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 1
BLAST of Spo06148.1 vs. NCBI nr
Match: gi|731322070|ref|XP_010671689.1| (PREDICTED: seed maturation protein PM36 homolog [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 374.8 bits (961), Expect = 1.000e-100 Identity = 178/219 (81.28%), Postives = 194/219 (88.58%), Query Frame = 1
BLAST of Spo06148.1 vs. NCBI nr
Match: gi|870865168|gb|KMT16235.1| (hypothetical protein BVRB_3g053910 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 374.8 bits (961), Expect = 1.000e-100 Identity = 178/219 (81.28%), Postives = 194/219 (88.58%), Query Frame = 1
BLAST of Spo06148.1 vs. NCBI nr
Match: gi|970060815|ref|XP_015057181.1| (PREDICTED: probable bifunctional TENA-E protein [Solanum pennellii]) HSP 1 Score: 315.8 bits (808), Expect = 5.700e-83 Identity = 143/214 (66.82%), Postives = 176/214 (82.24%), Query Frame = 1
BLAST of Spo06148.1 vs. NCBI nr
Match: gi|565389560|ref|XP_006360520.1| (PREDICTED: probable bifunctional TENA-E protein [Solanum tuberosum]) HSP 1 Score: 313.9 bits (803), Expect = 2.200e-82 Identity = 142/217 (65.44%), Postives = 176/217 (81.11%), Query Frame = 1
BLAST of Spo06148.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWN8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_026390 PE=4 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 1.100e-122 Identity = 218/219 (99.54%), Postives = 218/219 (99.54%), Query Frame = 1
BLAST of Spo06148.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CR22_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053910 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 7.200e-101 Identity = 178/219 (81.28%), Postives = 194/219 (88.58%), Query Frame = 1
BLAST of Spo06148.1 vs. UniProtKB/TrEMBL
Match: M1CLV7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400027315 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.500e-82 Identity = 142/217 (65.44%), Postives = 176/217 (81.11%), Query Frame = 1
BLAST of Spo06148.1 vs. UniProtKB/TrEMBL
Match: F6H731_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01130 PE=4 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 2.000e-82 Identity = 146/213 (68.54%), Postives = 170/213 (79.81%), Query Frame = 1
BLAST of Spo06148.1 vs. UniProtKB/TrEMBL
Match: K4D518_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 4.400e-82 Identity = 141/217 (64.98%), Postives = 176/217 (81.11%), Query Frame = 1
BLAST of Spo06148.1 vs. ExPASy Swiss-Prot
Match: TENAE_ARATH (Bifunctional TENA-E protein OS=Arabidopsis thaliana GN=TENA_E PE=1 SV=3) HSP 1 Score: 301.6 bits (771), Expect = 7.000e-81 Identity = 138/213 (64.79%), Postives = 166/213 (77.93%), Query Frame = 1
BLAST of Spo06148.1 vs. ExPASy Swiss-Prot
Match: TENAE_SOYBN (Probable bifunctional TENA-E protein OS=Glycine max GN=TENA_E PE=2 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 1.600e-80 Identity = 141/214 (65.89%), Postives = 161/214 (75.23%), Query Frame = 1
BLAST of Spo06148.1 vs. ExPASy Swiss-Prot
Match: TENA2_MAIZE (Bifunctional TENA2 protein OS=Zea mays GN=TENA2 PE=1 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.200e-67 Identity = 116/215 (53.95%), Postives = 153/215 (71.16%), Query Frame = 1
BLAST of Spo06148.1 vs. TAIR (Arabidopsis)
Match: AT3G16990.1 (Haem oxygenase-like, multi-helical) HSP 1 Score: 301.6 bits (771), Expect = 3.900e-82 Identity = 138/213 (64.79%), Postives = 166/213 (77.93%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo06148.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo06148.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo06148.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 3
BLAST of Spo06148.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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