Spo06579.1 (mRNA) | SpinachBase

Overview


Name	Spo06579.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY (2.4.1.-)
Location	SpoScf_01143 : 51262 .. 63437 (+)
Sequence length	981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCGCTGATTAATGAAAACTTGCATGGAGCTCCAACATATGGCGGGTGAGTTGAAGCTAGAGAACCTAGACACTGCCCTTCTATTGAAGATAAGGTAAAATTTGCAAATTAATATTTTCATGCAAACTGCACTCTTGTTATTCCACCCCCTCCAAAGAAAAGAGCTAGCAAGTTGCTAGGTTTTCTTATAGATGGAGTTTCTATAGAGCTTGTAAGTGAACTGATCGAATAGGAACATGTTTCAATTAGCGTATAGACTTATTCTCTCAATCCCTAATCCCATTAGTTGACGGTCACATGAAACTCGCCAGTTTATGCTTAATTTTCTTACTTTGTATGTTTATTAAAACTTTATAGTATCTTAAGCTCTAGGTAAGTGTGGGTAAGCTAGCAATTGACGATTACTTGTGCCGAATTCTAGAATTTAGATAGTGAGTAGGTAGTATGCTGGTGTTGACTTGATGTTGACGAAGCTTCTTCCATGCTCGGTAAAATTCTAGAATTTAACAGTGAAGATGCTTTTGTTTATGGAAGTACGAGTATCAGAAATGAATTTTTTTCGTAATTGTATCTTTGCCTCTAATTTGTAAATTGTTTGCAAAGAAGCAGTGTTACATTCAATTATATTAAGATAGGTATATGAAGTTTCACCTTGAAGAGGCTGCAGTAATGCAGTATCCTCTTACCAACTAAGCGACCCCTATTCCAATACATTTATGCGGAGTAGTCCGGACTATAATGGGTTGTATTCTTTGAAGACTTTAGCTTTAGTGATCTCCTTGAAATTATTACTACGAGCAATATGTTGGATGAGAGGATTAGCCGAGGCGAGAGGGAATGAGAGTCATATTTTCCCTTTTTGCCCCATCCCGTCATGGTTGTTCATCCAACACTACAAATTTTTTACTTGCTTTAGATATGAATTGATATTATTAGGTTGTAGTCCGTATTAAGTTTGGTTAGCTACATTACTACTCAAAACAGCACTTGAAATCTGTTGTGACAACGCGATTTGGTTTGAATTAGTGGTGCTGTGATCTAATGCAATTTCCTCAAAAGTTAGTAGTTGCATTCATTTAGTGCCACAAGAATTTGGTTTAATTGTTGATTTTGTTTAATTATGGATGGTTTAATTGAATTGGAATATTTACTATTTCAACGTTTCTTTTCTGCTATTTTATTCGATTTTTGGTTGTTTTATTGTGGAAATAATTTTATATCTGTAGTTTTATCTGAGAATTTTGATTTCTGACTTGCAGGAGTGCGCGAGTTTGCAAGAGTAATGTATATGGCAAGGTGGATTGGCGGACATCGTAGTCTGAAATATGTCTATATTTCTACCTTTCTTAGGGGGAGGGGGCTTTGCTAATTTTCATATTATATTCAGGTACAAGTTTTTTCAGTTCACGTCTCAGGTTTTAGGTTTAACTTGTGATATTTATTCCCTGAAGGTTCTTTTGTAATAGGTATCTGGCTTGTTCTACCAAAATGCAATGAAGTACTCAACTACTCCATCCAACGATCCTGACACACATAAGGATTTCAGGCCAAACCAGTAAGGCTAAGAGTGATCTTTCTGTCAAAGATATTGTTGAGCAGGTGATGTTTTTTCTTTATCCATGGTTCTTTATATAATGACTTTGGCGCATATGCCCTTCTCTTTAGCTCGGGATTGTATCTTTTTGCTTATGAATCTTATGGTGAATGCATCTTCAATCTTGGTATCTTCCAGACGTGAAGGACAATTCAGTTATGATGTATATAAAGGGGATTCCCGAAATGCCTAGATGCGGTTTCAGCTCTTTTGCAGTGAGGGTACTGAAGGATTATAGTAAGTTTTTCAGTTTTGGTTGATTATTTGACTTTATCTGTTAGCAATTTGAGGCTCTTTCAAATGTTGGTAGAAACTTTTATAAGTTTAAGTTATCAACACAGCTGAGAGCTATTTATATGTGTGGGATAGACATGGAGTAAAATACCCCCTTCCTCGTATATGGATTAGAGAGGATGGATTGGTGATGAAGCTACCCTGACCAAGCTAAGTATTGACTGAGTTTTTGGTATTCTGTAAAAATTCTTGGCTTAAATTGTCCCCTGTCATCAGGTATAAGCTGAGATTTCGATTGTTCTATTTGCCAAAATTTATGTGGGATCCTGTCGTGGTGTGATGTATTTGTAAATTTCTGTTATTATATCTCTTTATGATTCTTAATTTCTCAATCTTTTCTTACATGTATGATCATTATATATCTTTTTATGTTGGCCTCTTCATGTGTCAGTAGTAACATTTGTGAGATTGAAGAAATATCAAAGGGAGATTAGTGCACGGGTTATGCATAATTATATTTTTTTGCCTAAATTTTTCTCAAGTAGTAAAAAGTTTGTGCTAATTCCATGTCTTTTTTATACAGGCATCGATAGTGAAATTTCCTTGATATCCTAATCCTATTGCATCCTCCATATCAAGCAGAATCAGGGTGGAAGTTAAAAGTTGAAGTTATTTTGTTGTTAAAATCTCTCCTCTCTGTAATGTTTCGATTTGTTTAGGTTAAAATGAGTTTGTCTAAAGAGGTTGTGTTTTTCAAGATTTGTTGAATTATTGTATGTATATAATTTATTGATTATGTTTAGTGTTAAGAGTGATACTTGTATGGTTGTACATGTTTCACTTGAAACTACGATGAAAATTTTAGTTTGGTTTATAGGAAATACAACGTATAAAATGGTTGTTAAACTTATAATTTTCAATGAAAAGTAGTGTTTTTTTCTTGTGACAACAAATATAGCAACTTTCAAAGTGTAATTGCTAAATTATGGCGGTTATAATTTCACAAAGTTTATTTTTGCTACATTGGGGGACGGCCAACAACTAGTAAATTAAAAGAAGAAAAGATAAGGAGAAAGAAATAAAAATAAAAGAGAAAAAGAAATAAATGTGGAAAATAAAACCCCCTAATTAATCTAAACAATCAGACCCCCATCTCAATCAAGCCCAAGACCTTCGTCATTTTTTTTTCTTTCGCAGCTTCTTCAGCGCCGTTCATCTTCATCAATCATCTTCTCAATCAGCTCCTACCCACCATCATCCGTCGCTGATCATCATCAATCATCCATCGACCATCATCAATCATCTATCGACCATCATCATTATCATCATCAACGGCCATCATCAACGGTCATCAATGTTCAATCATCTCGTCGTCCACCATCATCAAATCGCAGCCGCTACCACCACGGTCACGTGCAAGGTCACAAGCCTTCATTAATTCCGTACACCCACCCGGTGCGGGCGCACCGTTTTGAGGTGCGGGCGCACATCTCTGGAAATGTCAAGTATGCAACAATCAGTAGCTTTTTTACGGGTGATTTCCGTGATGGTGCGGGCGCGGGAAATTGATTCGGGCGCACGAACTTGCTCTGTTTTTCTTCTCTGTTTTGTGTGATTTTGGTATGCTGATTTGGTGTTGGTGGGCTCGGTTAATTGTTGGTGAGGTGTTGGGGTGGTGAAGGATATGTATGTAGTGTGGTGTAGGTTAGGAGGAGGGCAGTAGTTGTTGTGGTCTAGAAATAAGTCAATGTTAGACTTTTGATCCATGGAATTTCAATTGAAGGCATTTGACTTTTCTTGACCAAGCTAAGACTTTACTCGACCTTTGAAACTCGCGCTTGACAATCCACACCGTTCACCTACATAATTAAAATAAAAGACGAGGGAAGAAACAAATAAAAGTAAAATAAAGAAAAACAATGAAATCTAAACTAATACTCCCTTCATTCCCTTTTGTTCTTCCCCTAAAAAATGTTCGGTGTGGTTTAAGAAAACTGAATCTTGGTTTGTATTTGGGATATGAGTAATGATTGGGAATAAGAGTTTATATATTTAAAAATAAAGTTAAGTGAGAGAAAATATTAAAAAAAAAGATATATGGGAGATATTTTGACCAAATTCGAACCAGAAAAAAATCAACCCAGAAACTTCGAATCAGAAAAATAAAAAATTCGAACCAGAAAAAATCAACCAAAAGATTTGGAAAAAATCAAAAGATAAAAAAATTCGAACCATGAAAATAACAAAAATCAAAAAATTCGAACCAGAAGATTTGACCAAATTCGGAAAAAAAAATTCGAACCAGAAGTTCGACAAAAAATCGAGCAAATTCAACAAAAAAACCACCCAAATTCAACCATGAAAATCGAGCAAATTCAACCCAGAAAATCGAACAACAAATTCAACCCAAAATCTAACAAATTCAACCCAGAAACTCGAACAAATTCAACCAAAAATCGAGCAAACTTCAACCAAGAAATATGAACAAATTCAACCCATAAATACGAACACATTCAACCCATAAATACGAACACATTCAACCCAAAATCAACCACAAATTCGACCAAATTTAACCCAAAAATCGACCAAATTCAACCCAAAAACTCAGCCAAAAAATCGACCAAAATTAATCCAAAAATTCGACGAAAATCAAACGAGAAATTTGACCAAATTCAACCAGAAAAATCGACAAAAAAATTTGCCCAGAAAATTCGACAAATAAAATACACAAAAATAAATAAAGACCCACTTGATCCTTACTATCACTCACGATTTTAAGGATTTAGAGGTCAAATTCGACCATGAAAACTCTAGATCTAGAGTTTTTATGGTCGAATTTCACCATCTAAAGCCATTTTTTCATATTCTACAACTTCAATGGAGGGCGGCGGCGGCGGCGGAGGTTTGGTTGTAGTGGTGGCGGCGATCTCAATTCCAGATCTCTGAAGAACAGAGAGATGTTTTGGAGGAGAGAGAGTGAAAATGAGAGGAGGAGAGAAACAGAGTAAGGAAATGAAGAGAGGGAGAGAAATCAGAGAGGTGAGGGGGTTGAAGTGAATCAATAAGGAAATGAAGAGAGAGAGAGAAATAAGAGAGGTGAGAGAGAGTGAAAGTGACGGTAGTGGGGTGGGGTTATGGGGGATGGGAAATTAATTAAATAAGGGTGGTGGGGAAAAAAAGGGTGGAAAAAGGGTAGAATCTTAGGGTTTTTTGGTAAATAGTGGAGAATCTTAGGGTAAATTGGTAAAAAAACTATGACCAAAAATAGTAAAGATTCAGTAGGGGAAGAACAAAAAGAAATGCTAAAAAAGGAAATGGGAAGAACAAAAAGGAATGGAGGGAGTACTAAATAATAATAATAATAATAATAATAATAATAATAATAATAAAAAAAAAATATTAATAGAAAATAGGAAATAGGAATAGATTTAGAAAATAATAACGATAACTAAAATAATTAAAATATAAAATTATAAAAACAAGGAAACCAAACAAATTACGAAATTAAGGTCTAAAAACAAAGAAAAATCACTAAGTACGCTAATTAAGCTACAAAATATAAAATAAATAAAGGTTAAAAATGAGAAAATTAGATAAATACTCCCTCTGTTCCTTTATGTTCTTCCCATTTGAGAAATGGTGTAAAAATTAAGAAAATGGAATCTTGTAATGATTGGGTGTAAGAGTAATGATTGAATGTAAGATAAAGTAATAAAGTATTAAAGGAAAGTAATAAAGAAATGAAGGAGAGAGAAGATATTTTAAATAAAGTAATAAAAAATTATAAAAGTGGAGTTGGGTGGGTGAATAGGGAAATGTGAATGAATTAAATAAGGGATGGTGGGGAATTTTATGGTAAAAAGGTATATCCAAAAAAGGAAATGGGAAGAACATATAGGAACGCCCAAAATAGAAACGGGAAGAACAAAAAGGAATGGAGGGAGTATATAATAAAATAAGCTAGAAAAATACCTAAAAACTACCCTAGGAGTGACATAAATGTCACTCATCAACTACCCTTCCCAGGTCCGGTCCTGATATTTTGAGGGCCCTAGGCGAAATAAGGGATTTGGGCCCCTTCCAAAATAATACGTCTTTAACTGAAATATTTTTTTTTTTTGTGAAATCCATTATATTGTTGAATTCAAATCAATAGAAACTTACTATATCTCCTTTGCAGGATCCTAGAATTTCAAAATCCGGCTCTATTCGATTTCTTGAAATATTTCAATAAAATAAATACTCACTTAATTACAAGATAATTAATATGCGTAAAGATATATTTTTTGAAAATAAAGGTTCATTTTGAGCATATAAAAATATCAATTAATTTTGTCTTCATTAAAATGCTTATCTATTTTAAAACTTATAAACCCATAGTCCATCAAATAAGCATTTTTTTGCTCACATATAGTTAAATCAATTAGAACTGAGTACTAAAAGTCAAATACTACGTACGTAAACTCAACGTAAAACACAAAATTAAAAATATTGACAAAGTTTAAAAAGAAAAGAAAAGAGATGGTGAGGGGAGTCGAACCCTAGACCTCTAGTAGATATCAAAACTTTAGAAACAACTTTCTACCAATGAGCCAAGAAAATAACATGTATTGTTAATGCGTTGTTTATTACTAGTACTAAATTACTGGATAGACAATTATTTTGGGCCCCTTTCCACCTTGGGCCCTAGGCGGTCGCACCCCTCGCCTACCCCCTAGGACCGGGCCTGACCCTTCCACAAGTATCCCAAAAAATTCTTCACCCATTCCCTACATCTAATATGAGCAACACCCTTTACCTTGATTCCCAAACTGCTGGCGTGCCACACCCTTTGCACTATCTCACAGTCTCTAAACAAGTGATCTTCTGTTTCTTCAGCTTTACAACAAAGAGGGCACCTGTCGTCCACCATTATTCCTCTTCTAATCATTCTAGGACGCAATGGGAGAGCCTTGTTAATCAGCTTCCACACGAAAATCTTCCATTTGGGCAGTAGGAGACTATGCCACAATAATTTATAAAATTTCGAGCTGGTATGATCACAATGTTCTCCATTATTTTCCTGCATCAAGAAAGCATAAATCAATTTTGAAGACATCTTTTCATGGCCATTTCCAACCCAGTGAAACTGATTTAAACTAGCACAAAATAAGTGTCGCCATGGGTACAACTGATCTGGTGCAGTTTCTCCTCTGGTTCAGACTAAGGTAATTCTGGAGTGCTTTGAACTAAGGTAAAACACAAAATACTACAATGGTAGAACTAACGGAGGACTAAACCACGTCATTAGTAAGGGTATTTTGGTTATTAAGTCATTTGTGAGGGGCATTTGGTGAATTTTTGAAAGTCGGGCGGCATTTGGTGAATTACGCCAAGATTCAGGGGTATTTCATGAAAAAATCGTTATTTTATTTAAACAATGCAAATTACGTTTATTTATAATGTTTTTACTTTTATCAAAATCTAACATTGGGAAAATGGGAAAGATTAAATGACCAAATGGAAAAGTGTGAGAGATTGAATGCCTCAATAAATTTAATTGGTTAAAATAATCTTTGAACACAAATTTTGATAGTTATATTAATGCATTTATGTGATAATATAAAATGAAATGTAAAGAACAAACTGGGACACAGAAAATGAAATACATAAATAACAAAAAGGGATGAATGGAGTATTATTTATGTCCGCTTTGAAATTACCCATTGTCACTCATATTAATATAACATTTGAATAACCTAATTGTTAATTTTTTAAATAAAACCGTGTATTAAAATAAATTTATTGTAATACCTTATACATGCAAGACATTTCGTATACCTTTTGAGTAATTTTAAACGAATAATTTTAATAAAAAAAGTTTTTAGTAAAAGAAAAAATCTATACAAAAAAATAAATAACTTTACTTATATCAATGTAACTTTTAAAGATTTTTTCCTTACGATTAGTTAGGGGTGTAAACGAGCCGAGCCGAGCCGAGCTTTACCATGTTCATGTTCATGTTCATTTAACTTATGCGAGCTCGAGCCCGAGCCCGAGCTTTTAATCGAGCTCAAAAATCTGTTCAAGCTCGGTTCGTTTAAAAGATTTTGTGTTCGCGAACTGTTCGTGAACGGCTCATTTATTAATCGAGCCGAGTTTATAAACAAGCTTTTTTCATGAACGAGCTTTCTTAAACGAGATTTAGAGTATAACCACTTGAAAATCTAACAAATTATAATCATATCTAATAATAAAGATTAAACTACATTACTTTATTTGATAAACAAACTAATAATTTAGAAAGAGTCAAAGAGCACTAATTTAGCAATTAAAATTTTATTTCAAAATATTTTTATTCTATTATAGATTTCAAAAGTCAAAAACATGATTTTTATTTATATTTGAAAAACGTATATATGGTAAAATATGATACATAACATAACTAGAAGAACTTGTTCACGAACATAAATGAACGAGTTGTTCATGAACATAATGTTGCGATTAAAGCGAAAATTAGAACAAACTTATCTGATTCGATGAACTGAACGAATAACAATTGTTGCGTCGTGGACACCCACTGTCCTAAAAGACGATTTCGCGCTACCTCCCGGTGCAGTAGAACAGAATGCGGTCGCCCTCCAGGATTAGCGCAACTCCGACGTTGTATGCACTCACAAAGCCGGATGGAGTCAGAACGTATGCCCAAAACCGAGAGCAATTTTGAGAGTAAGAATGTGTTTTCGTATTTTGTGTGTATGATTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGAGAAGGGAACTGAAACTCTGATTTAAATAATTAGAAGGAAAGCATTGCAACAGACAAAAACGGCTGAGGGAATGAATGTTGCAACAGCCAGAAAACGGTCAAAAAACATTGATCATAGTAACGGACGTAATTAATGGCATTTAATCCAACGGTTACGTAATCAATACAGATTCCCGTAACAGTGACTTGCGCAAACCGGTCCAGTTACCAAAAAGAACAGGGTTGACCCACAAAACCCACCCCACGCCCGCGAACCGCATTCCCAAGTACCAAGGCCCAAGGCCCAAGGCCCGCGCCCGGCCCGGCGCGCGCGCGCGTGTGTGTGATGTGTCCACCCATACCATTCTCACACTTTCTTAAACAAGAGTTACACTCATTCCCCAATTAATAAACAAGAGGAATATGAAGAGTTTTTCCAATGTGGGACTCTTGAATTTTCACTCACCCTTTTTTCCTTTGTGTTTCCCAATGAGAATTTCCAACACATAAATGAACGAGTTGTTCATGAACGTAAATGAACGAGCATACCTATGTTCATGTTCAAACTCGTTTATTAAGCGAGCTTCAAAAGTTGTTCAAGCTCGGCTCGTTTAATAAATGAACGAACATGAACGAGCTTTAAACGAGCCCGAGCCCGAGTAGTTTATTGATCGACTCGCCTCATTTACACCCGTACGATTAGTTATTACTCCGTATAATGTACTGTATGTCGTTACGAAATTGCGGTATTAATGATGGATTAGTGGATTACCAGCTATCCACATTTTTATCCACGGAAACCAAACTTCACAATAATAATAGCTACTCACCACTCGCTTCTCTTTTTCTTCAACCTCCCAAAATTTCTGCAAAATTGAAAAACCCACAAAATTGAACAATTAGCAGTTGAGAAAACCATGATTTCATCCTCAATCTCTGATAAAATCCTCCATTTGGTCCCAATTTTGGTGAAGTCTTCTTCTTCTACAGGCAAATCTTCTTCTATGTTTCTCTCTCAATCATCCTTTTCTTCTTGTGTATTGGTAGCTTCATTATCACCTTCCAAATTCAAGTTATTATCTTGTTCAACTAATGATCCCAGAAATTTGAGCTCTTGTGATGGTCTATTCAAACATCAACGCCATGTAATTGCTCTTTTTCTTTGCTTTTTTTTCTTTAAAATTTCCTGCCTTTTTTTGCTTGGATTGCTTGGTATATGTTAGAGAATTTGTTCTTTAACAACTTGTATGAGTCCATTACAAAATTGAAATTACTGGTTTGTTCAGATGGGGCTTTAATCCTCATTGACCATTGAGTAATTGAGTGTTCTTTAAGTGAGGGGTTGGCCCCTGAAGGAAGTAGTACATATTCACATACTCCATTTAGGATGTAATACTGTACTATGTGCCCAGTAATTTTTTGATACAGTTACACTATTGGTAACTAGCTTTCACGAAAATTCACAAAAATAATATTTAAGTGTTCTACTTGCAGTGATTAGTGAAGCTGTTAACCTAGATTTACATGTCAATGGATGTGATAGTGTTCAAGAGTTCCTTTTTGTTTCTGTTTGTAGGAGGCTGCATGTATCAGATATGTTACTGCTGCCTGATATTATGCAATTTCTGTAGGTTGTTTAGTGTTGGGTTGTTTATTAGTTAAATCTGTTATATTTTGAACCACATTCAATTCTATTGTGTTGTATGTTTATATATTACATGCTCCTATTTAATCAATCACAAAAGGCATTTAACACAAATGTTGCTCCTTTGACGATTTCTGTCATCTGATTTAGCTCTACTTTTCAGTGAATTTATTCTTAAAGATTATTTATATTTTACTGCTTTGCATACAGTCTTTAATTTTTCTCCTTTGTCGTGTATGAAGGCAGAAATTTGGAATGGCATTGACATGGAGACCAATCTTATCAATAAATCAGCATGGTAACTCTTCTCTTATTCTAAAATGTGATAAATCTATGCATAAATATTTCCAAGTGAATGAAGAATTTGCCAATATCTTGATTTCTGAATATTCTTTTCTAATGCTGCATATTCTATGTCTTCCAACTCTTACACCTTGATTTATGAGAAATTAATTTGTTCTTTTACTTTGATGAAGATTTTTAACAAAGGAAACAGTAAACCACTTTATGGCATTATGTTGTTTACTTGTTTTTAATATTTCCATGCTACCTCTTTCTCATTTCAACAAAAGGTTTGAATCTGTTTTGTTGGTAAAATATGCAAATATCTTGTTTACACATTTGATGCTAATGGCCTATGCAGAACTCTCTAAGAAACATTGCGCTGGCGAAAATGTGAAGGGTTTGTTGAGAGGTGGTATTGCCCTTTCATCTGCTACAATTGCCTGGTTGGCTTCTTCGCAAGTGGCATACTCCAGCACTGACATCAAAATAAATCCAGTTTATGAGGTTGGAGAGTTATTTGAATTGGGGATTCAATTGTCATATGTGCTTTTGCTGTTGGCTTTGCTTGGAGTTGGGACTTTTTATGTTATCCGCCAGGTCCTTGTTCGTCGTGAACTTGATCTTTCTGCTAAAGAATTGCAGGTTAGCTTTTCTTTTTGATGCATCTACAATAGGGAAGTTTAAAGTCTCTTGCTTAAAAATGTTCAGATTGTAAATGATTTATTGTCTATTTCCGAAGTCAAAGATTCATTTGTTCTTTTGGCTGTGGGATGTAATGGACTAAATCAAAATGGCTCTTAAAACCTCTTCGCTTCCTTTCCATGAAGTAGAAGATGGCCTTCCCGTTGTCGTCCCGTTATCGCTTTTGGGTCAATTGGAAACAACCTCTCTGCAATTGTAGGGGTAAGGTTGCGTACACCCAACCCCCCCCTACCCCACTTCTTGCCGGAGCCTCTTTGAGGCAATGGGGTAATGATAATGATAATGATGTAAATGATTTATCGTGATTATGAGATGTTAAACCTGAAAATATCAATCATTGTGCAACTTCAGGAGCAAGTAAGGAGTGGTGACGCAAATGCAACTGAACTCTTTGAACTTGGAGCAGTGATGCTGAGAAGAAAGTTTTACCCAGCCGCCACTAAATTCTTGCTTCAGGCAATTGATAAATGGGATGGAGATGACCAGGATCTTGCCCAGGTTTCACACCAATTATAATTTTCAGGCTTCTGAAAACATTGCATATTCTTTCTATTTTCAGGCTTCTGAAAACATTGCATATTCTTTCTAATTTTCAGGCTTCTGAAAACATTGCATCTTTCGACTTTTTGGTCTATCGAAATTAAAAGTGTCTATGTCTAAACTTAATAATCTCTACAAACAGGTATACAATGCATTGGGTGTGAGTTTTGTGCGTGATGGAAAGATTGACAAGGGTATCGCGCAGTTTGAGAAAGCTGTTAAGCTTCAACCAGGGTATGTGACTGCTTGGAACAACCTTGGTGATGCATTTGAACAGAAGAAAGATCTCAAGACTGCTCTTAAGGCGTTTGAAGAAGTACTGCTTTTCGACCCCAACAATAAGGTGGCACGCCCTCGAGTTGACTCACTGAGGGATCGTATTAACGTCTACAAAGGTGTTCCTGTTAAATCCAAAGAACGCTGA

mRNA sequence

ACCCGCTGATTAATGAAAACTTGCATGGAGCTCCAACATATGGCGGGTGAGTTGAAGCTAGAGAACCTAGACACTGCCCTTCTATTGAAGATAAGGTACAAGTTTTTTCAGTTCACGTCTCAGGTATCTGGCTTGTTCTACCAAAATGCAATGAAGTACTCAACTACTCCATCCAACGATCCTGACACACATAAGGATTTCAGGCCAAACCAGCAGAAATTTGGAATGGCATTGACATGGAGACCAATCTTATCAATAAATCAGCATGAACTCTCTAAGAAACATTGCGCTGGCGAAAATGTGAAGGGTTTGTTGAGAGGTGGTATTGCCCTTTCATCTGCTACAATTGCCTGGTTGGCTTCTTCGCAAGTGGCATACTCCAGCACTGACATCAAAATAAATCCAGTTTATGAGGTTGGAGAGTTATTTGAATTGGGGATTCAATTGTCATATGTGCTTTTGCTGTTGGCTTTGCTTGGAGTTGGGACTTTTTATGTTATCCGCCAGGTCCTTGTTCGTCGTGAACTTGATCTTTCTGCTAAAGAATTGCAGGAGCAAGTAAGGAGTGGTGACGCAAATGCAACTGAACTCTTTGAACTTGGAGCAGTGATGCTGAGAAGAAAGTTTTACCCAGCCGCCACTAAATTCTTGCTTCAGGCAATTGATAAATGGGATGGAGATGACCAGGATCTTGCCCAGGTATACAATGCATTGGGTGTGAGTTTTGTGCGTGATGGAAAGATTGACAAGGGTATCGCGCAGTTTGAGAAAGCTGTTAAGCTTCAACCAGGGTATGTGACTGCTTGGAACAACCTTGGTGATGCATTTGAACAGAAGAAAGATCTCAAGACTGCTCTTAAGGCGTTTGAAGAAGTACTGCTTTTCGACCCCAACAATAAGGTGGCACGCCCTCGAGTTGACTCACTGAGGGATCGTATTAACGTCTACAAAGGTGTTCCTGTTAAATCCAAAGAACGCTGA

Coding sequence (CDS)

ATGAAAACTTGCATGGAGCTCCAACATATGGCGGGTGAGTTGAAGCTAGAGAACCTAGACACTGCCCTTCTATTGAAGATAAGGTACAAGTTTTTTCAGTTCACGTCTCAGGTATCTGGCTTGTTCTACCAAAATGCAATGAAGTACTCAACTACTCCATCCAACGATCCTGACACACATAAGGATTTCAGGCCAAACCAGCAGAAATTTGGAATGGCATTGACATGGAGACCAATCTTATCAATAAATCAGCATGAACTCTCTAAGAAACATTGCGCTGGCGAAAATGTGAAGGGTTTGTTGAGAGGTGGTATTGCCCTTTCATCTGCTACAATTGCCTGGTTGGCTTCTTCGCAAGTGGCATACTCCAGCACTGACATCAAAATAAATCCAGTTTATGAGGTTGGAGAGTTATTTGAATTGGGGATTCAATTGTCATATGTGCTTTTGCTGTTGGCTTTGCTTGGAGTTGGGACTTTTTATGTTATCCGCCAGGTCCTTGTTCGTCGTGAACTTGATCTTTCTGCTAAAGAATTGCAGGAGCAAGTAAGGAGTGGTGACGCAAATGCAACTGAACTCTTTGAACTTGGAGCAGTGATGCTGAGAAGAAAGTTTTACCCAGCCGCCACTAAATTCTTGCTTCAGGCAATTGATAAATGGGATGGAGATGACCAGGATCTTGCCCAGGTATACAATGCATTGGGTGTGAGTTTTGTGCGTGATGGAAAGATTGACAAGGGTATCGCGCAGTTTGAGAAAGCTGTTAAGCTTCAACCAGGGTATGTGACTGCTTGGAACAACCTTGGTGATGCATTTGAACAGAAGAAAGATCTCAAGACTGCTCTTAAGGCGTTTGAAGAAGTACTGCTTTTCGACCCCAACAATAAGGTGGCACGCCCTCGAGTTGACTCACTGAGGGATCGTATTAACGTCTACAAAGGTGTTCCTGTTAAATCCAAAGAACGCTGA

Protein sequence

MKTCMELQHMAGELKLENLDTALLLKIRYKFFQFTSQVSGLFYQNAMKYSTTPSNDPDTHKDFRPNQQKFGMALTWRPILSINQHELSKKHCAGENVKGLLRGGIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo06579	Spo06579	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo06579.1	Spo06579.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06579.1.exon.1	Spo06579.1.exon.1	exon
Spo06579.1.exon.2	Spo06579.1.exon.2	exon
Spo06579.1.exon.3	Spo06579.1.exon.3	exon
Spo06579.1.exon.4	Spo06579.1.exon.4	exon
Spo06579.1.exon.5	Spo06579.1.exon.5	exon
Spo06579.1.exon.6	Spo06579.1.exon.6	exon
Spo06579.1.exon.7	Spo06579.1.exon.7	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06579.1.utr5p.1	Spo06579.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06579.1.CDS.1	Spo06579.1.CDS.1	CDS
Spo06579.1.CDS.2	Spo06579.1.CDS.2	CDS
Spo06579.1.CDS.3	Spo06579.1.CDS.3	CDS
Spo06579.1.CDS.4	Spo06579.1.CDS.4	CDS
Spo06579.1.CDS.5	Spo06579.1.CDS.5	CDS
Spo06579.1.CDS.6	Spo06579.1.CDS.6	CDS
Spo06579.1.CDS.7	Spo06579.1.CDS.7	CDS

Homology

[Close]

BLAST of Spo06579.1 vs. NCBI nr
Match: gi|902238349|gb|KNA25142.1| (hypothetical protein SOVF_009500 isoform A [Spinacia oleracea])

HSP 1 Score: 500.7 bits (1288), Expect = 1.800e-138
Identity = 259/279 (92.83%), Postives = 263/279 (94.27%), Query Frame = 1


		  
Query: 48  KYSTTPSNDPDTHKD----FRPNQQKFGMALTWRPILSINQHELSKKHCAGENVKGLLRG 107
           K  +  +NDP         F+  + KFGMALTWRPILSINQHELSKKHCAGENVKGLLRG
Sbjct: 52  KLLSCSTNDPRNLSSCDGLFKHQRHKFGMALTWRPILSINQHELSKKHCAGENVKGLLRG 111

Query: 108 GIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVI 167
           GIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVI
Sbjct: 112 GIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVI 171

Query: 168 RQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGD 227
           RQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGD
Sbjct: 172 RQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGD 231

Query: 228 DQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALK 287
           DQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALK
Sbjct: 232 DQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALK 291

Query: 288 AFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER 323
           AFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER
Sbjct: 292 AFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER 330

[Close]

BLAST of Spo06579.1 vs. NCBI nr
Match: gi|902238350|gb|KNA25143.1| (hypothetical protein SOVF_009500 isoform B [Spinacia oleracea])

HSP 1 Score: 500.4 bits (1287), Expect = 2.400e-138
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


		  
Query: 68  QKFGMALTWRPILSINQHELSKKHCAGENVKGLLRGGIALSSATIAWLASSQVAYSSTDI 127
           QKFGMALTWRPILSINQHELSKKHCAGENVKGLLRGGIALSSATIAWLASSQVAYSSTDI
Sbjct: 10  QKFGMALTWRPILSINQHELSKKHCAGENVKGLLRGGIALSSATIAWLASSQVAYSSTDI 69

Query: 128 KINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGD 187
           KINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGD
Sbjct: 70  KINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGD 129

Query: 188 ANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKIDKG 247
           ANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKIDKG
Sbjct: 130 ANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKIDKG 189

Query: 248 IAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRD 307
           IAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRD
Sbjct: 190 IAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRD 249

Query: 308 RINVYKGVPVKSKER 323
           RINVYKGVPVKSKER
Sbjct: 250 RINVYKGVPVKSKER 264

[Close]

BLAST of Spo06579.1 vs. NCBI nr
Match: gi|731360813|ref|XP_010692021.1| (PREDICTED: uncharacterized protein LOC104905248 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 418.3 bits (1074), Expect = 1.200e-113
Identity = 217/282 (76.95%), Postives = 243/282 (86.17%), Query Frame = 1


		  
Query: 48  KYSTTPSNDPDTHKD----FRPNQQKFGMALTWRPILSINQHELSKKHCA---GENVKGL 107
           K+ +  +NDP         F+  + KFGM L   PI+S+ + E+ KK+CA    EN +G 
Sbjct: 57  KFLSCSTNDPRNLSSCDALFKFQRHKFGMTLILGPIVSMEKCEVYKKYCAVKDNENFRGS 116

Query: 108 LRGGIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTF 167
           LRG  ALSSATIAWL SSQ AYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLG GTF
Sbjct: 117 LRGASALSSATIAWLLSSQAAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGAGTF 176

Query: 168 YVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKW 227
           +VIRQVLVRRELDLSAKELQEQVRSGDA+A ELFELGAVMLRRK+YPAATKFLLQAIDKW
Sbjct: 177 FVIRQVLVRRELDLSAKELQEQVRSGDASAVELFELGAVMLRRKYYPAATKFLLQAIDKW 236

Query: 228 DGDDQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKT 287
           DGDDQDLAQVYNALGVS+V D K++KGI  FEKAVK+QPGYVTAWNNLGDA+++KKDL +
Sbjct: 237 DGDDQDLAQVYNALGVSYVLDEKLEKGITMFEKAVKVQPGYVTAWNNLGDAYDKKKDLMS 296

Query: 288 ALKAFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER 323
           ALKAFEEVLLFDPNNKVARPRV+SLR+R+N+YKGVPVKSKER
Sbjct: 297 ALKAFEEVLLFDPNNKVARPRVESLRERVNMYKGVPVKSKER 338

[Close]

BLAST of Spo06579.1 vs. NCBI nr
Match: gi|731360817|ref|XP_010692023.1| (PREDICTED: uncharacterized protein ycf37 isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 417.2 bits (1071), Expect = 2.700e-113
Identity = 213/258 (82.56%), Postives = 234/258 (90.70%), Query Frame = 1


		  
Query: 68  QKFGMALTWRPILSINQHELSKKHCA---GENVKGLLRGGIALSSATIAWLASSQVAYSS 127
           QKFGM L   PI+S+ + E+ KK+CA    EN +G LRG  ALSSATIAWL SSQ AYSS
Sbjct: 10  QKFGMTLILGPIVSMEKCEVYKKYCAVKDNENFRGSLRGASALSSATIAWLLSSQAAYSS 69

Query: 128 TDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVR 187
           TDIKINPVYEVGELFELGIQLSYVLLLLALLG GTF+VIRQVLVRRELDLSAKELQEQVR
Sbjct: 70  TDIKINPVYEVGELFELGIQLSYVLLLLALLGAGTFFVIRQVLVRRELDLSAKELQEQVR 129

Query: 188 SGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKI 247
           SGDA+A ELFELGAVMLRRK+YPAATKFLLQAIDKWDGDDQDLAQVYNALGVS+V D K+
Sbjct: 130 SGDASAVELFELGAVMLRRKYYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSYVLDEKL 189

Query: 248 DKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDS 307
           +KGI  FEKAVK+QPGYVTAWNNLGDA+++KKDL +ALKAFEEVLLFDPNNKVARPRV+S
Sbjct: 190 EKGITMFEKAVKVQPGYVTAWNNLGDAYDKKKDLMSALKAFEEVLLFDPNNKVARPRVES 249

Query: 308 LRDRINVYKGVPVKSKER 323
           LR+R+N+YKGVPVKSKER
Sbjct: 250 LRERVNMYKGVPVKSKER 267

[Close]

BLAST of Spo06579.1 vs. NCBI nr
Match: gi|731360815|ref|XP_010692022.1| (PREDICTED: uncharacterized protein LOC104905248 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 411.8 bits (1057), Expect = 1.100e-111
Identity = 216/282 (76.60%), Postives = 242/282 (85.82%), Query Frame = 1


		  
Query: 48  KYSTTPSNDPDTHKD----FRPNQQKFGMALTWRPILSINQHELSKKHCA---GENVKGL 107
           K+ +  +NDP         F+  + KFGM L   PI+S+ +  + KK+CA    EN +G 
Sbjct: 57  KFLSCSTNDPRNLSSCDALFKFQRHKFGMTLILGPIVSMEKC-VYKKYCAVKDNENFRGS 116

Query: 108 LRGGIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTF 167
           LRG  ALSSATIAWL SSQ AYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLG GTF
Sbjct: 117 LRGASALSSATIAWLLSSQAAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGAGTF 176

Query: 168 YVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKW 227
           +VIRQVLVRRELDLSAKELQEQVRSGDA+A ELFELGAVMLRRK+YPAATKFLLQAIDKW
Sbjct: 177 FVIRQVLVRRELDLSAKELQEQVRSGDASAVELFELGAVMLRRKYYPAATKFLLQAIDKW 236

Query: 228 DGDDQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKT 287
           DGDDQDLAQVYNALGVS+V D K++KGI  FEKAVK+QPGYVTAWNNLGDA+++KKDL +
Sbjct: 237 DGDDQDLAQVYNALGVSYVLDEKLEKGITMFEKAVKVQPGYVTAWNNLGDAYDKKKDLMS 296

Query: 288 ALKAFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER 323
           ALKAFEEVLLFDPNNKVARPRV+SLR+R+N+YKGVPVKSKER
Sbjct: 297 ALKAFEEVLLFDPNNKVARPRVESLRERVNMYKGVPVKSKER 337

[Close]

BLAST of Spo06579.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S1Z9_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009500 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.300e-138
Identity = 259/279 (92.83%), Postives = 263/279 (94.27%), Query Frame = 1


		  
Query: 48  KYSTTPSNDPDTHKD----FRPNQQKFGMALTWRPILSINQHELSKKHCAGENVKGLLRG 107
           K  +  +NDP         F+  + KFGMALTWRPILSINQHELSKKHCAGENVKGLLRG
Sbjct: 52  KLLSCSTNDPRNLSSCDGLFKHQRHKFGMALTWRPILSINQHELSKKHCAGENVKGLLRG 111

Query: 108 GIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVI 167
           GIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVI
Sbjct: 112 GIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVI 171

Query: 168 RQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGD 227
           RQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGD
Sbjct: 172 RQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGD 231

Query: 228 DQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALK 287
           DQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALK
Sbjct: 232 DQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALK 291

Query: 288 AFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER 323
           AFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER
Sbjct: 292 AFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER 330

[Close]

BLAST of Spo06579.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0A4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_009500 PE=4 SV=1)

HSP 1 Score: 500.4 bits (1287), Expect = 1.700e-138
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 1


		  
Query: 68  QKFGMALTWRPILSINQHELSKKHCAGENVKGLLRGGIALSSATIAWLASSQVAYSSTDI 127
           QKFGMALTWRPILSINQHELSKKHCAGENVKGLLRGGIALSSATIAWLASSQVAYSSTDI
Sbjct: 10  QKFGMALTWRPILSINQHELSKKHCAGENVKGLLRGGIALSSATIAWLASSQVAYSSTDI 69

Query: 128 KINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGD 187
           KINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGD
Sbjct: 70  KINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGD 129

Query: 188 ANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKIDKG 247
           ANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKIDKG
Sbjct: 130 ANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKIDKG 189

Query: 248 IAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRD 307
           IAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRD
Sbjct: 190 IAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRD 249

Query: 308 RINVYKGVPVKSKER 323
           RINVYKGVPVKSKER
Sbjct: 250 RINVYKGVPVKSKER 264

[Close]

BLAST of Spo06579.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIJ1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017500 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 8.400e-114
Identity = 217/282 (76.95%), Postives = 243/282 (86.17%), Query Frame = 1


		  
Query: 48  KYSTTPSNDPDTHKD----FRPNQQKFGMALTWRPILSINQHELSKKHCA---GENVKGL 107
           K+ +  +NDP         F+  + KFGM L   PI+S+ + E+ KK+CA    EN +G 
Sbjct: 57  KFLSCSTNDPRNLSSCDALFKFQRHKFGMTLILGPIVSMEKCEVYKKYCAVKDNENFRGS 116

Query: 108 LRGGIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTF 167
           LRG  ALSSATIAWL SSQ AYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLG GTF
Sbjct: 117 LRGASALSSATIAWLLSSQAAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGAGTF 176

Query: 168 YVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKW 227
           +VIRQVLVRRELDLSAKELQEQVRSGDA+A ELFELGAVMLRRK+YPAATKFLLQAIDKW
Sbjct: 177 FVIRQVLVRRELDLSAKELQEQVRSGDASAVELFELGAVMLRRKYYPAATKFLLQAIDKW 236

Query: 228 DGDDQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKT 287
           DGDDQDLAQVYNALGVS+V D K++KGI  FEKAVK+QPGYVTAWNNLGDA+++KKDL +
Sbjct: 237 DGDDQDLAQVYNALGVSYVLDEKLEKGITMFEKAVKVQPGYVTAWNNLGDAYDKKKDLMS 296

Query: 288 ALKAFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER 323
           ALKAFEEVLLFDPNNKVARPRV+SLR+R+N+YKGVPVKSKER
Sbjct: 297 ALKAFEEVLLFDPNNKVARPRVESLRERVNMYKGVPVKSKER 338

[Close]

BLAST of Spo06579.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIR6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g017500 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 7.900e-112
Identity = 216/282 (76.60%), Postives = 242/282 (85.82%), Query Frame = 1


		  
Query: 48  KYSTTPSNDPDTHKD----FRPNQQKFGMALTWRPILSINQHELSKKHCA---GENVKGL 107
           K+ +  +NDP         F+  + KFGM L   PI+S+ +  + KK+CA    EN +G 
Sbjct: 57  KFLSCSTNDPRNLSSCDALFKFQRHKFGMTLILGPIVSMEKC-VYKKYCAVKDNENFRGS 116

Query: 108 LRGGIALSSATIAWLASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTF 167
           LRG  ALSSATIAWL SSQ AYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLG GTF
Sbjct: 117 LRGASALSSATIAWLLSSQAAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGAGTF 176

Query: 168 YVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKW 227
           +VIRQVLVRRELDLSAKELQEQVRSGDA+A ELFELGAVMLRRK+YPAATKFLLQAIDKW
Sbjct: 177 FVIRQVLVRRELDLSAKELQEQVRSGDASAVELFELGAVMLRRKYYPAATKFLLQAIDKW 236

Query: 228 DGDDQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKT 287
           DGDDQDLAQVYNALGVS+V D K++KGI  FEKAVK+QPGYVTAWNNLGDA+++KKDL +
Sbjct: 237 DGDDQDLAQVYNALGVSYVLDEKLEKGITMFEKAVKVQPGYVTAWNNLGDAYDKKKDLMS 296

Query: 288 ALKAFEEVLLFDPNNKVARPRVDSLRDRINVYKGVPVKSKER 323
           ALKAFEEVLLFDPNNKVARPRV+SLR+R+N+YKGVPVKSKER
Sbjct: 297 ALKAFEEVLLFDPNNKVARPRVESLRERVNMYKGVPVKSKER 337

[Close]

BLAST of Spo06579.1 vs. UniProtKB/TrEMBL
Match: D7SRA6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0072g00860 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 4.000e-100
Identity = 195/269 (72.49%), Postives = 221/269 (82.16%), Query Frame = 1


		  
Query: 71  GMALTWRPILSINQHELSKKHCAGENVKGLLRGGIALSSATIA----------------W 130
           G+ +T  PIL I   E++ K     N+KG L   +A   AT A                W
Sbjct: 57  GLDVTESPILQIFGREVAIKSLTSRNLKGFLTNILAFEDATNAKRPLIAVSALSCGVASW 116

Query: 131 LASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDL 190
           L S+QVA+SS D+K+N VYEVGELFELGIQLSY+LLLL L+GVGTF+VIRQVLVRRELDL
Sbjct: 117 LTSAQVAHSSEDVKMNVVYEVGELFELGIQLSYLLLLLGLIGVGTFFVIRQVLVRRELDL 176

Query: 191 SAKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNAL 250
           SAKELQEQVRSGDA+ATELFELGAVMLRRKFYPAATKFLLQAI+KWDGDDQDLAQVYNAL
Sbjct: 177 SAKELQEQVRSGDASATELFELGAVMLRRKFYPAATKFLLQAIEKWDGDDQDLAQVYNAL 236

Query: 251 GVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPN 310
           GVS+VRDGK++KGI QFE AVKLQPGYVTAWNNLGDA+E+KKDLK+ALKAFEEVLLFDPN
Sbjct: 237 GVSYVRDGKLEKGITQFENAVKLQPGYVTAWNNLGDAYEKKKDLKSALKAFEEVLLFDPN 296

Query: 311 NKVARPRVDSLRDRINVYKG-VPVKSKER 323
           NKVARPR D+L+DR+ +YKG VP + KER
Sbjct: 297 NKVARPRRDALKDRVQLYKGVVPTQPKER 325

[Close]

BLAST of Spo06579.1 vs. ExPASy Swiss-Prot
Match: YCF37_GUITH (Uncharacterized protein ycf37 OS=Guillardia theta GN=ycf37 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.000e-17
Identity = 48/166 (28.92%), Postives = 91/166 (54.82%), Query Frame = 1


		  
Query: 145 LSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRK 204
           LS +LL + +      ++I Q+  RR  DL    +QE++R+  A+  + +ELG + L +K
Sbjct: 13  LSLILLFILV------FIISQIWSRRTADLRLVSIQEKIRNAKADGKDFYELGVIFLSKK 72

Query: 205 FYPAATKFLLQAIDKWDGDDQD-LAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVT 264
            Y  A      A++ W+ DD+  LA +YN +G ++ +  + D  +  +EKA+  +P Y+ 
Sbjct: 73  LYDQAIINFRYALNLWELDDKTGLANLYNTIGFTYTQIAQYDLALFYYEKALLHEPNYLV 132

Query: 265 AWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRDRI 310
              N+G  +E+  +L  A   + ++L +D +NK A  +++ L  R+
Sbjct: 133 TLKNIGFIYEKTNNLVKAKDIYLQILKYDVDNKFATDKLNLLTGRL 172

[Close]

BLAST of Spo06579.1 vs. ExPASy Swiss-Prot
Match: YCF37_CYAPA (Uncharacterized protein ycf37 OS=Cyanophora paradoxa GN=ycf37 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.200e-12
Identity = 44/163 (26.99%), Postives = 87/163 (53.37%), Query Frame = 1


		  
Query: 147 YVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVMLRRKFY 206
           + L++LAL+     ++I+++   R LDL    L++++    A   +   L ++ +++K Y
Sbjct: 13  FSLIVLALIS----FLIQEIQKSRFLDLEITRLRKKIYQEKATEKDYNNLASIYIKKKLY 72

Query: 207 PAATKFLLQAIDKWDGDDQDLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWN 266
             A K  L+ ++  + D   LA +YN+LG       + +  I  ++KA+   P ++ A  
Sbjct: 73  SQAQKEFLKILENKNLDKSQLALIYNSLGYICSAQEQYELAIEYYKKALFYIPDFILARI 132

Query: 267 NLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRDRI 310
           NL   FE K     A+  ++EVL+FDP N++A+ ++  + + I
Sbjct: 133 NLARIFELKNLKTEAINMYQEVLIFDPKNQLAKRKLSIIENLI 171

[Close]

BLAST of Spo06579.1 vs. ExPASy Swiss-Prot
Match: YCF37_PYRYE (Uncharacterized protein ycf37 OS=Pyropia yezoensis GN=ycf37 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.300e-8
Identity = 43/176 (24.43%), Postives = 82/176 (46.59%), Query Frame = 1


		  
Query: 141 LGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLSAKELQEQVRSGDANATELFELGAVM 200
           L + + Y+ +L   L +  + + +Q+     L+   K   ++ ++      E F    V 
Sbjct: 3   LALPIFYLSILTIFLLILNWLIFQQLKTILLLESQFKYFVDKSQNRKLEPDESFAFAKVC 62

Query: 201 LRRKFYPAATKFLLQAIDKWDG-----DDQDLAQVYNALGVSFVRDGKIDKGIAQFEKAV 260
           + +K++  A      A+  +       ++  +A +YN LG  +   G+       +E+A+
Sbjct: 63  VAKKYFSKAIIEGQLALKNYRDLNILDNNIVIANLYNMLGFIYFEAGQTSFAKNFYEQAL 122

Query: 261 KLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNNKVARPRVDSLRDRINV 312
           ++ P YV A NNL   +E+ KDLK A   +++VL  + NNK A  R D +    N+
Sbjct: 123 QINPNYVVALNNLAKIYEEVKDLKKAESLYDKVLTLNLNNKTANRRKDFIAKTKNI 178

[Close]

BLAST of Spo06579.1 vs. ExPASy Swiss-Prot
Match: SPY_ARATH (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Arabidopsis thaliana GN=SPY PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.400e-7
Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 1


		  
Query: 226 DLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAF 285
           + AQ  N LGV +   GK+D   +  EKA+   P Y  A+NNLG  +    ++  A+ A+
Sbjct: 361 NFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAIDAY 420

Query: 286 EEVLLFDPNNKVA 299
           EE L  DP+++ A
Sbjct: 421 EECLKIDPDSRNA 433

[Close]

BLAST of Spo06579.1 vs. ExPASy Swiss-Prot
Match: SPY_EUSER (Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY OS=Eustoma exaltatum subsp. russellianum GN=SPY PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.800e-7
Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 1


		  
Query: 226 DLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAF 285
           + +Q  N LGV F   GK+D   +  EKA+   P Y  A+NNLG  +    ++  A++A+
Sbjct: 338 NFSQSLNNLGVVFTVQGKMDAAASMIEKAIVANPTYAEAYNNLGVLYRDAGNIFLAIEAY 397

Query: 286 EEVLLFDPNNKVA 299
           E+ L  DP+++ A
Sbjct: 398 EQCLKIDPDSRNA 410

[Close]

BLAST of Spo06579.1 vs. TAIR (Arabidopsis)
Match: AT1G22700.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 329.7 bits (844), Expect = 2.000e-90
Identity = 170/208 (81.73%), Postives = 187/208 (89.90%), Query Frame = 1


		  
Query: 116 ASSQVAYSSTDIKINPVYEVGELFELGIQLSYVLLLLALLGVGTFYVIRQVLVRRELDLS 175
           A  Q+A ++  IK  P+YEVGELFEL IQLSY+LLLL LLGVGTFYVIRQVLVRRELDLS
Sbjct: 94  AHPQLAAAAEIIKPEPIYEVGELFELSIQLSYLLLLLGLLGVGTFYVIRQVLVRRELDLS 153

Query: 176 AKELQEQVRSGDANATELFELGAVMLRRKFYPAATKFLLQAIDKWDGDDQDLAQVYNALG 235
           AKELQEQVRSGDA+ATELFELGAVMLRRKFYPAA KFL QAI KWDGDDQDLAQVYNALG
Sbjct: 154 AKELQEQVRSGDASATELFELGAVMLRRKFYPAANKFLQQAIQKWDGDDQDLAQVYNALG 213

Query: 236 VSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAFEEVLLFDPNN 295
           VS+VR+ K+DKGIAQFE AVKLQPGYVTAWNNLGDA+E+KK+L  AL AFEEVLLFDPNN
Sbjct: 214 VSYVREDKLDKGIAQFEMAVKLQPGYVTAWNNLGDAYEKKKELPLALNAFEEVLLFDPNN 273

Query: 296 KVARPRVDSLRDRINVYKG-VPVKSKER 323
           KVARPR D+L+DR+ +YKG V VKSK+R
Sbjct: 274 KVARPRRDALKDRVKLYKGVVAVKSKKR 301

[Close]

BLAST of Spo06579.1 vs. TAIR (Arabidopsis)
Match: AT3G11540.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 57.4 bits (137), Expect = 1.900e-8
Identity = 27/73 (36.99%), Postives = 41/73 (56.16%), Query Frame = 1


		  
Query: 226 DLAQVYNALGVSFVRDGKIDKGIAQFEKAVKLQPGYVTAWNNLGDAFEQKKDLKTALKAF 285
           + AQ  N LGV +   GK+D   +  EKA+   P Y  A+NNLG  +    ++  A+ A+
Sbjct: 361 NFAQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAGNITMAIDAY 420

Query: 286 EEVLLFDPNNKVA 299
           EE L  DP+++ A
Sbjct: 421 EECLKIDPDSRNA 433

The following BLAST results are available for this feature:

BLAST of Spo06579.1 vs. NCBI nr
BLAST of Spo06579.1 vs. UniProtKB/TrEMBL
BLAST of Spo06579.1 vs. ExPASy Swiss-Prot
BLAST of Spo06579.1 vs. TAIR (Arabidopsis)

BLAST of Spo06579.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902238349\|gb\|KNA25142.1\|	1.8e-138	92.8	hypothetical protein SOVF_0095...	[more]
gi\|902238350\|gb\|KNA25143.1\|	2.4e-138	100.	hypothetical protein SOVF_0095...	[more]
gi\|731360813\|ref\|XP_010692021.1\|	1.2e-113	76.9	PREDICTED: uncharacterized pro...	[more]
gi\|731360817\|ref\|XP_010692023.1\|	2.7e-113	82.5	PREDICTED: uncharacterized pro...	[more]
gi\|731360815\|ref\|XP_010692022.1\|	1.1e-111	76.6	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo06579.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S1Z9_SPIOL	1.3e-138	92.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9S0A4_SPIOL	1.7e-138	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BIJ1_BETVU	8.4e-114	76.9	Uncharacterized protein OS=Bet...	[more]
A0A0J8BIR6_BETVU	7.9e-112	76.6	Uncharacterized protein OS=Bet...	[more]
D7SRA6_VITVI	4.0e-100	72.4	Putative uncharacterized prote...	[more]

BLAST of Spo06579.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
YCF37_GUITH	8.0e-17	28.9	Uncharacterized protein ycf37 ...	[more]
YCF37_CYAPA	1.2e-12	26.9	Uncharacterized protein ycf37 ...	[more]
YCF37_PYRYE	2.3e-8	24.4	Uncharacterized protein ycf37 ...	[more]
SPY_ARATH	3.4e-7	36.9	Probable UDP-N-acetylglucosami...	[more]
SPY_EUSER	5.8e-7	35.6	Probable UDP-N-acetylglucosami...	[more]

BLAST of Spo06579.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT1G22700.1	2.0e-90	81.7	Tetratricopeptide repeat (TPR)...	[more]
AT3G11540.1	1.9e-8	36.9	Tetratricopeptide repeat (TPR)...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 187..298 score: 2.1
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 186..299 score: 2.33
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 190..295 score: 21
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 228..261 score: 0.016coord: 262..295 score: 8.
IPR019734	Tetratricopeptide repeat	PROFILE	PS50005	TPR	coord: 262..295 score: 12.007coord: 228..261 score: 11
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 117..322 score: 5.8E
None	No IPR available	PANTHER	PTHR26312:SF66	SUBFAMILY NOT NAMED	coord: 117..322 score: 5.8E
None	No IPR available	PFAM	PF13432	TPR_16	coord: 233..289 score: 9.

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0006655	phosphatidylglycerol biosynthetic process
biological_process	GO:0048564	photosystem I assembly
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005515	protein binding