Spo06706.1 (mRNA) | SpinachBase

Overview


Name	Spo06706.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Ribosomal protein L46
Location	SpoScf_01084 : 207974 .. 214429 (-)
Sequence length	1375

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAACTAAACGGTAAAGGTACCATAATTATTTCGGGTCAAACGCCATTTGTAAAGAGGTTTAAGTATTAGGGTTTATTATCTGGGAAATTTGAAACGGAAAAGATGCAGAGAAGATGGACGACGCCATTGATGCACTCACTTCGAAGCTTCAGCAGCAGTAGTAGTAATAGTAGTAGCAGTGATAAGATTGTCGCTTCAGTGCTCTTCGAGAGGCTTCCTGTCGTTATCCCCAAAATCGACCCGATCATCTACGCTTTTCAGGAATTCTCGTAAGCCCTGATTTTCCCTACTTTGGTTCGTATATTTTTCCTTAAAATGAAAATGTTCGTCATTTCTTTGTTGTTTCTTTAATTTCGGGATCAAATGAGGTGTAATTTGACCAATACTTGCTTAATTGCTGATGATTGAATAATGAATTTGATGAATTGATGATATTATAAGGTAAAATGAAATATGAAAGAGCAAATTTTAAGCTATAGCTTTGATTTTTCGGGCTACATTTTAGAAAAATGAAAAAAGGGGGTGCTTTACTCCGGTGCATATTTTAGGGGGAGTTTTTGCCCCTTTTTCTCTGTATGGAGCCTGGAAGAAGAGATTATACCAATATTTGTGTCAAACTGCCTATTTGAAGTGTGGAAAGAAATGGCAATTTCGACCTCGATTTGTTTTAACATTTGATTGGTTAACTTCTAAAGAAAATTGGTATTGGAAGTTTTGAGAGAGACTGTTAAAGTAGAAGCTAAATACCGGAGTTATATCTGTAATGGATGGAAGTTTGAATCATCATCATTCTGCTTAAGAACGGTTCTAGTCTACTGAGAGTCCATGGTTCTATTCTCTACACGCCTAAACAATTATTGCCAGTGGGGACAGCTATTAGTTTGAACACTGCTATATGCGGAATAGGACTTAGAGTTGCTTAAAAGCTGAAACTGGTATGCATAATTGCATTGCTTGCTTGACATTTGGGTGATTGCTAGGTTACTGTCATGTTGCAGCGAGTGAGGATAACTATACAACACGTGGGAATTGTATTGGGAGTCTTCATATTACCTTCTGTTCTTGTGTTAGATACTCAACAATGTGATATGGGCATGAGCACTTGACACTTCATTTTGGACAAGAAACATGCAAGATTCTTTATTTTGCAAAATAGTTGAGTTTGATGCCTGGACACATGTCCAACACTATTAGTCGTGTGCAAGTTATAGGCATATGGTTGGTACAGCCGAAAATGAAAAATGAAAAATGAAGGATATGGTGTTTTCAGGGTGGGACTGAACCTTATCGTGTGTTCTCAGGAATTAAAGAAAGGGGAATGGTAAAAGAAGGTTATTTTCAATTTCAACAGCATGAATATGCTCAGTGACCCACTTATTTTAGGGAACTCACTAATTTCTGAAGATCTTGTACCTTCTTGGTTCCTGTCTGTGAACAAGTGATTTTTATTGTGCTGGACATGTTTACTGTTGCAAGGTTTTCAGAAAATTAAGCGGTTTAGGTTCCGTTTGGTTGGGTGTAAAACATTTTCTGTGTAAAATGATCTTCATGGAAAACAATTTACAATGGAAAACACAATTCCAAAATTAGTTTTCCGTTGTTTGGTTCTATGTAAGAAAAATGATGAACCGAAAGGAAAATGGAAGGGAAAGTAAGCAGGTAGTGAGAGGAGTGTACAAGAGAGATAAGAAAAAAGGAAGGAAAACGGTTTTCCCTTCATTTTGAAGGGAAAATGGTTTTCCTTCATTTGGAGAGCAATTTTACTCCTAGGGAAAATGGTTTTACACTCCTTTTCAAACCAAAAAATGTAAAATTGAAAATAGAGGAAAATTATTTTCCAGAAAAATGTTTTACGCCTCAGCAAACGGAGCCTTAATGTAAATATTTTTCTGCATAAACTGTAGTGTCGCAGCTTCTTCTGTGTTCTTATTTAGACAGGTAATGTTTCTACCTCTTTTTGTGATCCTTTGTTGTTTGACTATGTATACAGGTTTCGATGGAAGCAGCAATATCGACGGGTATATCCTGATGAATTCTATAAGAAATATGAATCTCGGTAAACACTTAGTTTTTATAGTCTTGTCTAATCTCCGTCTCATCATCTTATTGCCTTGAAATTGGATATGTGTCTCATACTCTTTCATATGATCATCTGGAGACTACAATTTTATGGATGTTGGAAACTATTATTTGCATATCTTGTTGGTACGGTCTATGAGTTCCTCCCTCTATTTCATCACAGTTAAAAAATTTGGTGGAACCTAATATTTGTTGCATGCTATAGAAAATGGTTTGAAGCAAAATCTACGTGTGTCTATTATTATGTTAGTTATTTTTCAGGCTTGATATTCCTCTACCCATCCCCTGAGGAGTCTGGTATGGAACACCTGACGGTGCAAGTGTTGTCTTGAAATTTAGTTCACACCCTTTGTACATGAAATTATTGTGATGTGCTATTTAGTTATTGAGAAAGTCATGGAAGTAAACTACACTCTCAACCACAAGAGATCGGAGTGGACTAGTTTTCTGTTTTTTTGCCTAGTTCTGTATTCTGGTTCCAGAATGGTAGAATTGTACTTGAAGAAAACTAAAAGTCGTGTATGACCTAACCTTAGAAAATTAAGAAATCAGCTAGCTACTAGATCAAGACTAGGTTCTATTTACACCATATGGATCTTCAGTAAGTTCTTTGTTTGTTCTTATAGGTATTGACTCGTGTCTTATCCATAAACCTCTCTCCTATTTATGTTAATCCTTTGTTTGCATCTTCTGGCAGGGGGAAGGGTGATTATCAAATTGACTATCAACCAGCTCCTCGGATCACTGAAGCTGACAAAACAAATGACAAAAGGTATTAGTTGGTGTTTTATTGGGAAGTTCTCTTTGGTAACCTTAAGTTTCTTATTTTCCTCTTTGGTAAAATGGAAACAAGAATTTTCTCTATGGCAGCCTTAAGTTTCTGTACTCCGTACATAATTAAACAAATGGCATATATTTTTGGTCAAAAACTATATTATTAGACTAGTTGTACTTAACTATAGTTATTTAACGATTAAGTTACCTAAATTCCTTAAAAACTAGTTTTCCGTCCTACATGAAAAGAGTGTTTTTCTCCAAATTAAATCCTCTTATAGGCCGACCCCAAATCATTTTGGGACTAAGGCTTTGTTGTTGACTTGGTGTTGTATAGACCGATAAACCTTAACATCCAACTCATTATTGTGTAGTAGTTGCTTACATTATCAGAAATGTTTACTTTGCAATGTTTTTAAATAATCATTTTTCAGTTTCCCAAATTTTCATTCGGATTAATACATCAATTGATTTGTAATGGTTTTTGTTTGAAACGCTTCAATTGATGAAGATTTAGTTGAGTATAGGTGAATGATGTACCAGCCCATTAAAGGGATTTTTTTTTAAAATTCAGATGTTAAACACGGTTAATAAAATCAGTTAAAGCATGACTTATACCATTGTTTGACTATGTATAGAAACTGAAGGTTACCAAAGAGAAAATTTTTGTTTTTATTTTACCAAAGAGAAAAATAAGGAACTTAAGGTTACCAAAGAGAATTTCCCTATTTTCTTTTGTACATAACATTTTGTATCACTGGTTTTCTTAAACATAAGATCCAATTAGGTAGGCGTTAAAAACAAATGTTTTGAATCAGGGTAATTTGGGTATAGAATATTTGTTATTGCAGTCTAGGCTGCATGCATCAGACCCGCCCTATCCTGTCACGAGCAAGTGCCTCTATGTAGGCATAGGGGAGTGTTGCAGTATGATGCATAAAAGTTAGTTTGTTACTTGTCTTTCTGAATACGAGCCCAGAAAGTTAACATTTTTCTCTTTTCTGTGAAAGAATTACACATTAGTCACTAGGTGCCCTTTAATAATGTAATTCACCAACTTAGGAAGCCTATGACTCACCAGTCACCACCCTATAGTGGTTTTGCCGCTGATAACTTCTGTTTTTGCAATCATGTTAAAACAATGATCCCCATGATGTCTGTGTCTTGACATGTTGTTCGTTTGATTTTGGCATGGTCTTGTTGTAATCTGTAATATTCATGAACTGCCTACAACATTCATTTGTTCCTTTTTATCTTTTACTAGAAATTCCACTTACCATTTGATTAAAAAAAATAAGAAGTAAAAGAAGAGGAAACTGGAATGAAGATCTCTGAATTGAAATACTAAAGGATAGGATGATGAAGTGCTATACCCATGGGTGGATGCAAATGGCTTGGGATCAGATCTGGCAAGGCCAGCAAAGTATGGTAGTAGGTTAAAAATGTGATAGTGAAGGAAGGATGGCATTGTGAGTGATTTCAGAAAATTATTTAATTCTGAGATGCTTTGCTTGAGCAACTGGAAAAAAGAGAACTTTACAATAGATGGAATACAGGAAGGCCCACATTCTTTGTTTTCTTTGTTCTCTGTTTATCCATGTAAACTAAGTTATAAGAAAGAAACACAATTTACAAGGAATGATCCTTGGTCTTGTGTGCACGGTGAACTGGTGAAGACTGAAGAGGTGTTGGGAGGCAGAAGAGGCAGGGAAAGAGGGATTTAAATTAATTTTTTTGTAGGGGGGATGAGGGGTCAAAAGTTGGCTTGCTTTGGCTTGATCGTTAAACTATTTGCAGTCCCTTCTCACTGTAAAGTAGCCTATGGTCCTTCACTCCTTACACCTTCTGGATCAAGAATCAGTTAGAAATAACCTCTTTGTATTTGTAGGATTAAGGCTGTACCTCCCTTAAACTGTCAACTTAGGCTTTGGGGCAGTGTTGATGCTGTGTTGCATTTTTTACTCGCACAGTTTAAGTTGATCGAAATTTGTCTCCTCTACTCTAAGTTATAGGTTACTTTATCAAACCCTGAATTTGAATGTTGCATGAATTGTCAACAGATATTGTGTTTAATCGGTTCAAGGATGAATGTTTTTGTTTTATTTAGTTTTCAAGAGTCTATTGCGTAGTGTTGATAGACACTGGATATCTGGGCTAGACTGCAAGGATAATGTCTTAAAACTTGCTGTAAACTAAAATCATTGCCACATCCACGTGATCGTAGAGTATGCTGTCAGTTTTTATTTGCTAAGCTAAACTTCTTTGCCCATGTCTTCTGTTTAAATTTTTCTGTCATATTGTGTTGGAAAGAGATGAGTTTCAATTAAGATCTTTATATTTCAGTTCAGAAGAGAGGGGGTGTTTCAGTTAATTGTTATTGTTGGTTTTGGAATCCTTGATATATATATGTATAGTTAGCATTAAACTGTTTTATCTGTTCCTTTAAGGTCATTGCAAAGAGCACTTGATCGAAGGCTCTATCTTCTCCTTCATGGAACTTCTTACGGTTCTCCTGATGGGAACCCTGTTTGGCATTTTCCAGAAAAGGTCTACGAAAAAGAAGAGACTCTGCGGAAGGTTGGTAATCTTAGAAACTGGTCTCTCCTATCTTGTCTCTGTTTTGATTTTTTTTTCTCATAATCCTCTGCTGATTGCAGTGTGCGGAGTCTGCTCTGCAATCTGTTCTTGGTGACCTTTCACACACATATTTTGTTGGAAATGCACCAATGGGCCATATGGCTGTGCAGACAGCTGACAAAGCAGATACATTGAAGGTGTGTTTCTATCTGTGGCACAAATACAGTTGCATCTGCTGTTATTCCGTGCCTTGAAACTTGATAATAAGATACTTCATCCTCTAATTTTAATGTTTTTCTTTTTAGCAGAGATTCTTCTTCAAATCACAAGTAATTGCAACAAACAAGTTTAACATTGGTGAATGTGATGATTATGTTTGGGTGACCAAGGATGAACTACTGGAGTATTTCCCGGACCAAGCTGAGTACTTGAAGCAGATGATTATTAGCTAAAATGGTGATATTACCAAAGAGTAATTTTGTAGACCTCCGTAGCCTTCAACTACTGGAGCATCTGTATTGTGACAAGTAGAGTAGTAGTCCAACATTCCTGCTAAATTTCTGTGGCAACAGAGGAATTAAGCTGTTCTAAGTTTTGTTTTGGTTCCTGAGGAAGATTAGGTTTTCCGTCTGTGATATCTCAGCAGCATCCGTAGTGCAGCCAGCTTCCAGACTCACCTTTAAGCCTTTGAAATAAAATTATACTTCTATGATGAGGGACAGGGCTAATGAAAATTTGTTTGTTGTCTGAGTTTATGCATCTTGTAGCCAAGATATCAATGCATGTTGATGCTTGGAAGTGTTAATGCAATATGCTATCAGAATCTTACCCTTTATGTTCCCATACTTCTTTTTTATAGAAGATGTTCCCAAAACACTATTCAAATGTTGGAGAGTACCCTCCTGATTCCTGAGTGTCCCTTGTTGTGGAAGGTTAGTCCTACATTTGTTGCGTACTTATCATCCCTAGAATTGGTTGTATCAATAATTTTTTCCGCTCCCCTAAATTCCTAAAGGTGACTCAAC

mRNA sequence

TCAACTAAACGGTAAAGGTACCATAATTATTTCGGGTCAAACGCCATTTGTAAAGAGGTTTAAGTATTAGGGTTTATTATCTGGGAAATTTGAAACGGAAAAGATGCAGAGAAGATGGACGACGCCATTGATGCACTCACTTCGAAGCTTCAGCAGCAGTAGTAGTAATAGTAGTAGCAGTGATAAGATTGTCGCTTCAGTGCTCTTCGAGAGGCTTCCTGTCGTTATCCCCAAAATCGACCCGATCATCTACGCTTTTCAGGAATTCTCGTTTCGATGGAAGCAGCAATATCGACGGGTATATCCTGATGAATTCTATAAGAAATATGAATCTCGGGGGAAGGGTGATTATCAAATTGACTATCAACCAGCTCCTCGGATCACTGAAGCTGACAAAACAAATGACAAAAGGTCATTGCAAAGAGCACTTGATCGAAGGCTCTATCTTCTCCTTCATGGAACTTCTTACGGTTCTCCTGATGGGAACCCTGTTTGGCATTTTCCAGAAAAGGTCTACGAAAAAGAAGAGACTCTGCGGAAGTGTGCGGAGTCTGCTCTGCAATCTGTTCTTGGTGACCTTTCACACACATATTTTGTTGGAAATGCACCAATGGGCCATATGGCTGTGCAGACAGCTGACAAAGCAGATACATTGAAGAGATTCTTCTTCAAATCACAAGTAATTGCAACAAACAAGTTTAACATTGGTGAATGTGATGATTATGTTTGGGTGACCAAGGATGAACTACTGGAGTATTTCCCGGACCAAGCTGAGTACTTGAAGCAGATGATTATTAGCTAAAATGGTGATATTACCAAAGAGTAATTTTGTAGACCTCCGTAGCCTTCAACTACTGGAGCATCTGTATTGTGACAAGTAGAGTAGTAGTCCAACATTCCTGCTAAATTTCTGTGGCAACAGAGGAATTAAGCTGTTCTAAGTTTTGTTTTGGTTCCTGAGGAAGATTAGGTTTTCCGTCTGTGATATCTCAGCAGCATCCGTAGTGCAGCCAGCTTCCAGACTCACCTTTAAGCCTTTGAAATAAAATTATACTTCTATGATGAGGGACAGGGCTAATGAAAATTTGTTTGTTGTCTGAGTTTATGCATCTTGTAGCCAAGATATCAATGCATGTTGATGCTTGGAAGTGTTAATGCAATATGCTATCAGAATCTTACCCTTTATGTTCCCATACTTCTTTTTTATAGAAGATGTTCCCAAAACACTATTCAAATGTTGGAGAGTACCCTCCTGATTCCTGAGTGTCCCTTGTTGTGGAAGGTTAGTCCTACATTTGTTGCGTACTTATCATCCCTAGAATTGGTTGTATCAATAATTTTTTCCGCTCCCCTAAATTCCTAAAGGTGACTCAAC

Coding sequence (CDS)

ATGCAGAGAAGATGGACGACGCCATTGATGCACTCACTTCGAAGCTTCAGCAGCAGTAGTAGTAATAGTAGTAGCAGTGATAAGATTGTCGCTTCAGTGCTCTTCGAGAGGCTTCCTGTCGTTATCCCCAAAATCGACCCGATCATCTACGCTTTTCAGGAATTCTCGTTTCGATGGAAGCAGCAATATCGACGGGTATATCCTGATGAATTCTATAAGAAATATGAATCTCGGGGGAAGGGTGATTATCAAATTGACTATCAACCAGCTCCTCGGATCACTGAAGCTGACAAAACAAATGACAAAAGGTCATTGCAAAGAGCACTTGATCGAAGGCTCTATCTTCTCCTTCATGGAACTTCTTACGGTTCTCCTGATGGGAACCCTGTTTGGCATTTTCCAGAAAAGGTCTACGAAAAAGAAGAGACTCTGCGGAAGTGTGCGGAGTCTGCTCTGCAATCTGTTCTTGGTGACCTTTCACACACATATTTTGTTGGAAATGCACCAATGGGCCATATGGCTGTGCAGACAGCTGACAAAGCAGATACATTGAAGAGATTCTTCTTCAAATCACAAGTAATTGCAACAAACAAGTTTAACATTGGTGAATGTGATGATTATGTTTGGGTGACCAAGGATGAACTACTGGAGTATTTCCCGGACCAAGCTGAGTACTTGAAGCAGATGATTATTAGCTAA

Protein sequence

MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWKQQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADKADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo06706	Spo06706	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo06706.1	Spo06706.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06706.1.utr5p.1	Spo06706.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06706.1.CDS.6	Spo06706.1.CDS.6	CDS
Spo06706.1.CDS.5	Spo06706.1.CDS.5	CDS
Spo06706.1.CDS.4	Spo06706.1.CDS.4	CDS
Spo06706.1.CDS.3	Spo06706.1.CDS.3	CDS
Spo06706.1.CDS.2	Spo06706.1.CDS.2	CDS
Spo06706.1.CDS.1	Spo06706.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06706.1.utr3p.1	Spo06706.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06706.1.exon.6	Spo06706.1.exon.6	exon
Spo06706.1.exon.5	Spo06706.1.exon.5	exon
Spo06706.1.exon.4	Spo06706.1.exon.4	exon
Spo06706.1.exon.3	Spo06706.1.exon.3	exon
Spo06706.1.exon.2	Spo06706.1.exon.2	exon
Spo06706.1.exon.1	Spo06706.1.exon.1	exon

Homology

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BLAST of Spo06706.1 vs. NCBI nr
Match: gi|902206449|gb|KNA15473.1| (hypothetical protein SOVF_097800 [Spinacia oleracea])

HSP 1 Score: 473.4 bits (1217), Expect = 2.300e-130
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1


		  
Query: 1   MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWK 60
           MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWK
Sbjct: 1   MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWK 60

Query: 61  QQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGT 120
           QQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGT
Sbjct: 61  QQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGT 120

Query: 121 SYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADK 180
           SYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADK
Sbjct: 121 SYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADK 180

Query: 181 ADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           ADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS
Sbjct: 181 ADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 232

[Close]

BLAST of Spo06706.1 vs. NCBI nr
Match: gi|731313245|ref|XP_010679139.1| (PREDICTED: 39S ribosomal protein L46, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 427.9 bits (1099), Expect = 1.100e-116
Identity = 212/232 (91.38%), Postives = 220/232 (94.83%), Query Frame = 1


		  
Query: 1   MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWK 60
           MQR+ T PLM SLRSFSSS   SSSSDKIVASVLFERLPVVIPKIDP++YAFQEFSFRWK
Sbjct: 1   MQRKCTLPLMRSLRSFSSS---SSSSDKIVASVLFERLPVVIPKIDPLVYAFQEFSFRWK 60

Query: 61  QQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGT 120
           QQY+R+YPDEFYKKYESRGKGDYQIDY+PA RITEADKTNDKRSLQRALDRRL+LLLHGT
Sbjct: 61  QQYQRIYPDEFYKKYESRGKGDYQIDYKPASRITEADKTNDKRSLQRALDRRLFLLLHGT 120

Query: 121 SYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADK 180
           SYGSPDG  VWHFPEKVYE EETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTA+K
Sbjct: 121 SYGSPDGKAVWHFPEKVYEDEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTAEK 180

Query: 181 ADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           AD LKRFFFKSQVIATNKFNIG CDDYVWVTKDELLEYFPDQAEYLKQMIIS
Sbjct: 181 ADPLKRFFFKSQVIATNKFNIGGCDDYVWVTKDELLEYFPDQAEYLKQMIIS 229

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BLAST of Spo06706.1 vs. NCBI nr
Match: gi|802537161|ref|XP_012092846.1| (PREDICTED: 39S ribosomal protein L46, mitochondrial [Jatropha curcas])

HSP 1 Score: 356.7 bits (914), Expect = 3.100e-95
Identity = 175/227 (77.09%), Postives = 196/227 (86.34%), Query Frame = 1


		  
Query: 9   LMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWKQQYRRVYP 68
           LM   R   ++    + S+KIVASVLFERLPVV+PKIDP++YAFQEFSFRW+QQYRR+YP
Sbjct: 5   LMWVARPLVTTRGFCTKSEKIVASVLFERLPVVVPKIDPVVYAFQEFSFRWRQQYRRLYP 64

Query: 69  DEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGN 128
           DEF  K  SRGKGDYQIDY PAPRITEADKTND++SLQRALDRRLYLLL+G +Y SP G 
Sbjct: 65  DEFLDKSNSRGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGNAYRSPSGK 124

Query: 129 PVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTA--DKADT-LK 188
           PVWHFPEKVYE EETLRKCAESALQSVLGDLSHTYFVGNAPMGHM ++T   D  D   K
Sbjct: 125 PVWHFPEKVYEAEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMVIKTTTDDAPDAGYK 184

Query: 189 RFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           +FFFKSQVIATNKF IG+CDD+VWVTKDELLEYFP+QAE+LK+MIIS
Sbjct: 185 QFFFKSQVIATNKFEIGKCDDFVWVTKDELLEYFPEQAEFLKKMIIS 231

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BLAST of Spo06706.1 vs. NCBI nr
Match: gi|1009162690|ref|XP_015899570.1| (PREDICTED: 39S ribosomal protein L46, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 356.3 bits (913), Expect = 4.100e-95
Identity = 172/213 (80.75%), Postives = 194/213 (91.08%), Query Frame = 1


		  
Query: 23  SSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWKQQYRRVYPDEFYKKYESRGKGD 82
           SS+S+KIVASVLFERLPVVIPKIDP++YAFQEFSF+W+QQYRR+YPDE   K  SRGKGD
Sbjct: 21  SSNSEKIVASVLFERLPVVIPKIDPVVYAFQEFSFQWQQQYRRMYPDELLDKSNSRGKGD 80

Query: 83  YQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPVWHFPEKVYEKEE 142
           Y IDY PAPRITEADK NDK+SLQRALDRRLYLLL+G++YGSP GNPVWHFPEKVYE EE
Sbjct: 81  YHIDYVPAPRITEADKKNDKKSLQRALDRRLYLLLYGSTYGSPTGNPVWHFPEKVYESEE 140

Query: 143 TLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQ-TADKAD--TLKRFFFKSQVIATNKF 202
           TLRKCAESAL+SV+GDLSHTYFVGNAPMGHM VQ T + AD  + KRFFFKSQVIATNKF
Sbjct: 141 TLRKCAESALESVIGDLSHTYFVGNAPMGHMVVQATENLADFSSFKRFFFKSQVIATNKF 200

Query: 203 NIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           NI +C+D+VWVTKDE+LEYFP+QAE+L +MIIS
Sbjct: 201 NINKCEDFVWVTKDEVLEYFPEQAEFLNKMIIS 233

[Close]

BLAST of Spo06706.1 vs. NCBI nr
Match: gi|661887624|emb|CDP08755.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 355.9 bits (912), Expect = 5.300e-95
Identity = 172/225 (76.44%), Postives = 196/225 (87.11%), Query Frame = 1


		  
Query: 14  RSFSSSSS---NSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWKQQYRRVYPDE 73
           R F SSSS   N+   DKI+ASV+FERLPVVIPKIDP++YAFQEFSFRW+QQYRR YP++
Sbjct: 17  RGFCSSSSRAANTGGDDKIIASVVFERLPVVIPKIDPVVYAFQEFSFRWQQQYRREYPEK 76

Query: 74  FYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPV 133
           F KK ++RGKGDYQIDY P+PR+TEADKTNDK+SL+RALDRRLYLLL+GT+YGSP G P 
Sbjct: 77  FLKKSDARGKGDYQIDYVPSPRVTEADKTNDKKSLERALDRRLYLLLYGTAYGSPSGKPT 136

Query: 134 WHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADKADTL---KRF 193
           WHFPEKVYE E TLRKCAESALQSV+GDLSHTYFVGNAPMGH+  Q +D    L   KRF
Sbjct: 137 WHFPEKVYESEGTLRKCAESALQSVVGDLSHTYFVGNAPMGHIVAQPSDSNQDLPSFKRF 196

Query: 194 FFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           FFKSQVIATNKFNIG  DD+VWVTKDELLEYFP+Q++YLK+MIIS
Sbjct: 197 FFKSQVIATNKFNIGRGDDFVWVTKDELLEYFPEQSDYLKKMIIS 241

[Close]

BLAST of Spo06706.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R7G2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_097800 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 1.600e-130
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1


		  
Query: 1   MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWK 60
           MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWK
Sbjct: 1   MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWK 60

Query: 61  QQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGT 120
           QQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGT
Sbjct: 61  QQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGT 120

Query: 121 SYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADK 180
           SYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADK
Sbjct: 121 SYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADK 180

Query: 181 ADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           ADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS
Sbjct: 181 ADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 232

[Close]

BLAST of Spo06706.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FVG6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g010480 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 7.600e-117
Identity = 212/232 (91.38%), Postives = 220/232 (94.83%), Query Frame = 1


		  
Query: 1   MQRRWTTPLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWK 60
           MQR+ T PLM SLRSFSSS   SSSSDKIVASVLFERLPVVIPKIDP++YAFQEFSFRWK
Sbjct: 1   MQRKCTLPLMRSLRSFSSS---SSSSDKIVASVLFERLPVVIPKIDPLVYAFQEFSFRWK 60

Query: 61  QQYRRVYPDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGT 120
           QQY+R+YPDEFYKKYESRGKGDYQIDY+PA RITEADKTNDKRSLQRALDRRL+LLLHGT
Sbjct: 61  QQYQRIYPDEFYKKYESRGKGDYQIDYKPASRITEADKTNDKRSLQRALDRRLFLLLHGT 120

Query: 121 SYGSPDGNPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADK 180
           SYGSPDG  VWHFPEKVYE EETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTA+K
Sbjct: 121 SYGSPDGKAVWHFPEKVYEDEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTAEK 180

Query: 181 ADTLKRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           AD LKRFFFKSQVIATNKFNIG CDDYVWVTKDELLEYFPDQAEYLKQMIIS
Sbjct: 181 ADPLKRFFFKSQVIATNKFNIGGCDDYVWVTKDELLEYFPDQAEYLKQMIIS 229

[Close]

BLAST of Spo06706.1 vs. UniProtKB/TrEMBL
Match: A0A067LEG0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24065 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 2.200e-95
Identity = 175/227 (77.09%), Postives = 196/227 (86.34%), Query Frame = 1


		  
Query: 9   LMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWKQQYRRVYP 68
           LM   R   ++    + S+KIVASVLFERLPVV+PKIDP++YAFQEFSFRW+QQYRR+YP
Sbjct: 5   LMWVARPLVTTRGFCTKSEKIVASVLFERLPVVVPKIDPVVYAFQEFSFRWRQQYRRLYP 64

Query: 69  DEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGN 128
           DEF  K  SRGKGDYQIDY PAPRITEADKTND++SLQRALDRRLYLLL+G +Y SP G 
Sbjct: 65  DEFLDKSNSRGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGNAYRSPSGK 124

Query: 129 PVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTA--DKADT-LK 188
           PVWHFPEKVYE EETLRKCAESALQSVLGDLSHTYFVGNAPMGHM ++T   D  D   K
Sbjct: 125 PVWHFPEKVYEAEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMVIKTTTDDAPDAGYK 184

Query: 189 RFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           +FFFKSQVIATNKF IG+CDD+VWVTKDELLEYFP+QAE+LK+MIIS
Sbjct: 185 QFFFKSQVIATNKFEIGKCDDFVWVTKDELLEYFPEQAEFLKKMIIS 231

[Close]

BLAST of Spo06706.1 vs. UniProtKB/TrEMBL
Match: A0A068UJQ9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00027844001 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 3.700e-95
Identity = 172/225 (76.44%), Postives = 196/225 (87.11%), Query Frame = 1


		  
Query: 14  RSFSSSSS---NSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWKQQYRRVYPDE 73
           R F SSSS   N+   DKI+ASV+FERLPVVIPKIDP++YAFQEFSFRW+QQYRR YP++
Sbjct: 17  RGFCSSSSRAANTGGDDKIIASVVFERLPVVIPKIDPVVYAFQEFSFRWQQQYRREYPEK 76

Query: 74  FYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPV 133
           F KK ++RGKGDYQIDY P+PR+TEADKTNDK+SL+RALDRRLYLLL+GT+YGSP G P 
Sbjct: 77  FLKKSDARGKGDYQIDYVPSPRVTEADKTNDKKSLERALDRRLYLLLYGTAYGSPSGKPT 136

Query: 134 WHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADKADTL---KRF 193
           WHFPEKVYE E TLRKCAESALQSV+GDLSHTYFVGNAPMGH+  Q +D    L   KRF
Sbjct: 137 WHFPEKVYESEGTLRKCAESALQSVVGDLSHTYFVGNAPMGHIVAQPSDSNQDLPSFKRF 196

Query: 194 FFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           FFKSQVIATNKFNIG  DD+VWVTKDELLEYFP+Q++YLK+MIIS
Sbjct: 197 FFKSQVIATNKFNIGRGDDFVWVTKDELLEYFPEQSDYLKKMIIS 241

[Close]

BLAST of Spo06706.1 vs. UniProtKB/TrEMBL
Match: A0A022QU12_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012774mg PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.800e-94
Identity = 168/227 (74.01%), Postives = 198/227 (87.22%), Query Frame = 1


		  
Query: 9   LMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWKQQYRRVYP 68
           L +  R FS+S+S ++  +KI+ASVLFERLPVV+PKIDP++YAFQEFSFRW QQYRR YP
Sbjct: 14  LQNGKRGFSTSTSKNAGDEKILASVLFERLPVVVPKIDPVVYAFQEFSFRWGQQYRREYP 73

Query: 69  DEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGN 128
           +   KK ++RGKGDYQIDY PAPR+TEADKTNDKRSLQRALD+RLYLL++GT++GS D  
Sbjct: 74  ESLLKKADARGKGDYQIDYTPAPRVTEADKTNDKRSLQRALDKRLYLLIYGTAHGSKDEK 133

Query: 129 PVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADKAD---TLK 188
           PVWHFPEKVYE E TLRKCAESALQSV+GDLSHTYFVGNAPMGH+ +Q ++      +LK
Sbjct: 134 PVWHFPEKVYESEPTLRKCAESALQSVIGDLSHTYFVGNAPMGHIILQPSEDNQVNTSLK 193

Query: 189 RFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           RFFFKSQVIATNKF+IG C+DYVWVTKDELLEYFP+QAEYL +MII+
Sbjct: 194 RFFFKSQVIATNKFDIGRCEDYVWVTKDELLEYFPEQAEYLNKMIIN 240

[Close]

BLAST of Spo06706.1 vs. ExPASy Swiss-Prot
Match: RM46_HUMAN (39S ribosomal protein L46, mitochondrial OS=Homo sapiens GN=MRPL46 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.700e-16
Identity = 55/150 (36.67%), Postives = 79/150 (52.67%), Query Frame = 1


		  
Query: 85  IDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPVWHFPEKVYEKEETL 144
           + ++   RITEAD+ ND+ SL R LDR L LL+    +G  D   VW  P+  ++  ETL
Sbjct: 129 LQFKLGARITEADEKNDRTSLNRKLDRNLVLLVR-EKFGDQD---VWILPQAEWQPGETL 188

Query: 145 RKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADKADT-----LKRFFFKSQVIATNKF 204
           R  AE  L ++  +     F+GNAP GH   +      T      K FFFK+ ++  +  
Sbjct: 189 RGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFS 248

Query: 205 NIGECDDYVWVTKDELLEYFPDQAEYLKQM 230
             G    +VWVTKDEL +Y   + +YL Q+
Sbjct: 249 QAGNKGHHVWVTKDELGDYL--KPKYLAQV 272

[Close]

BLAST of Spo06706.1 vs. ExPASy Swiss-Prot
Match: RM46_PONAB (39S ribosomal protein L46, mitochondrial OS=Pongo abelii GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.700e-16
Identity = 55/150 (36.67%), Postives = 79/150 (52.67%), Query Frame = 1


		  
Query: 85  IDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPVWHFPEKVYEKEETL 144
           + ++   RITEAD+ ND+ SL R LDR L LL+    +G  D   VW  P+  ++  ETL
Sbjct: 129 LQFKLGARITEADEKNDRTSLNRKLDRNLVLLVR-EKFGDQD---VWILPQTEWQPGETL 188

Query: 145 RKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADKADT-----LKRFFFKSQVIATNKF 204
           R  AE  L ++  +     F+GNAP GH   +      T      K FFFK+ ++  +  
Sbjct: 189 RGTAERTLATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFS 248

Query: 205 NIGECDDYVWVTKDELLEYFPDQAEYLKQM 230
             G    +VWVTKDEL +Y   + +YL Q+
Sbjct: 249 QAGNKGHHVWVTKDELGDYL--KPKYLAQV 272

[Close]

BLAST of Spo06706.1 vs. ExPASy Swiss-Prot
Match: RM46_MOUSE (39S ribosomal protein L46, mitochondrial OS=Mus musculus GN=Mrpl46 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.700e-16
Identity = 56/151 (37.09%), Postives = 81/151 (53.64%), Query Frame = 1


		  
Query: 85  IDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPVWHFPEKVYEKEETL 144
           + ++P  R TEADK ND+ SL R LDR L LL+     G  D   VW  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNLVLLVR-EKLGDQD---VWMLPQVEWQPGETL 186

Query: 145 RKCAESALQSVLGDLSHTYFVGNAPMGH------MAVQTADKADTLKRFFFKSQVIATNK 204
           R  AE  L ++  +     F+GNAP GH       A+QT      +K FFFK+ ++  + 
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLG-VKVFFFKALLLTGDF 246

Query: 205 FNIGECDDYVWVTKDELLEYFPDQAEYLKQM 230
              G+   +VW +K+EL +Y   Q +YL Q+
Sbjct: 247 VQAGKKSRHVWASKEELGDYL--QPKYLAQV 270

[Close]

BLAST of Spo06706.1 vs. ExPASy Swiss-Prot
Match: RM46_RAT (39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus GN=Mrpl46 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.400e-15
Identity = 53/150 (35.33%), Postives = 79/150 (52.67%), Query Frame = 1


		  
Query: 85  IDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPVWHFPEKVYEKEETL 144
           + ++P  R TEADK ND+ SL R LDR L LL+     G  D   +W  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNLILLVR-EKLGDQD---LWMLPQVEWQPGETL 186

Query: 145 RKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADKADT-----LKRFFFKSQVIATNKF 204
           R  AE  L ++  +     F+GNAP GH   +      T     +K FFFK+ ++  +  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIRTESDLGVKVFFFKALLLTGDFV 246

Query: 205 NIGECDDYVWVTKDELLEYFPDQAEYLKQM 230
             G+   +VW +K+EL +Y   Q +YL Q+
Sbjct: 247 QTGKKGRHVWASKEELGDYL--QPKYLAQV 270

[Close]

BLAST of Spo06706.1 vs. ExPASy Swiss-Prot
Match: RM46_BOVIN (39S ribosomal protein L46, mitochondrial OS=Bos taurus GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.100e-14
Identity = 52/150 (34.67%), Postives = 80/150 (53.33%), Query Frame = 1


		  
Query: 85  IDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDGNPVWHFPEKVYEKEETL 144
           + ++P  RIT+AD  ND+ SL R LDR L LL+     G  D   VW  P+  ++  ETL
Sbjct: 127 LQFKPGARITDADVKNDRSSLHRKLDRNLILLVK-DKLGDQD---VWMLPQAEWQPGETL 186

Query: 145 RKCAESALQSVLGDLSHTYFVGNAPMGHMAVQ-----TADKADTLKRFFFKSQVIATNKF 204
           R+ AE  L ++  +     F+GNAP GH   +      A+ +   K FFFK+ ++  +  
Sbjct: 187 RQTAERTLATLSENNLEAKFLGNAPCGHYKFKFPQAVRAEGSLGAKIFFFKALLLTGDFS 246

Query: 205 NIGECDDYVWVTKDELLEYFPDQAEYLKQM 230
              E   +VW +K+EL +Y   + +YL Q+
Sbjct: 247 PAVEKGRHVWASKEELGDYL--KPKYLAQV 270

[Close]

BLAST of Spo06706.1 vs. TAIR (Arabidopsis)
Match: AT1G14620.1 (decoy)

HSP 1 Score: 302.0 bits (772), Expect = 3.200e-82
Identity = 146/228 (64.04%), Postives = 179/228 (78.51%), Query Frame = 1


		  
Query: 8   PLMHSLRSFSSSSSNSSSSDKIVASVLFERLPVVIPKIDPIIYAFQEFSFRWKQQYRRVY 67
           PL+ S R F +      SSDKIVASVLFERL VVIPK DP +YAFQEF F W+QQ+RR Y
Sbjct: 12  PLLESRRGFCT------SSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRY 71

Query: 68  PDEFYKKYESRGKGDYQIDYQPAPRITEADKTNDKRSLQRALDRRLYLLLHGTSYGSPDG 127
           PDEF    ++R KG+YQ+DY PAPRITEADK ND++SL RALD++LYLL+ G  +G+   
Sbjct: 72  PDEFLDIAKNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSD 131

Query: 128 NPVWHFPEKVYEKEETLRKCAESALQSVLGDLSHTYFVGNAPMGHMAVQTADKADTL--- 187
            PVWHFPEKVY+ E TLRKCAESAL+SV+GDL+HTYFVGNAPM HMA+Q  ++   L   
Sbjct: 132 KPVWHFPEKVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSY 191

Query: 188 KRFFFKSQVIATNKFNIGECDDYVWVTKDELLEYFPDQAEYLKQMIIS 233
           KRFFFK  V+A +K++I  C+D+VWVTKDELLE+FP+QAE+  +MIIS
Sbjct: 192 KRFFFKCSVVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS 233

The following BLAST results are available for this feature:

BLAST of Spo06706.1 vs. NCBI nr
BLAST of Spo06706.1 vs. UniProtKB/TrEMBL
BLAST of Spo06706.1 vs. ExPASy Swiss-Prot
BLAST of Spo06706.1 vs. TAIR (Arabidopsis)

BLAST of Spo06706.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902206449\|gb\|KNA15473.1\|	2.3e-130	100.	hypothetical protein SOVF_0978...	[more]
gi\|731313245\|ref\|XP_010679139.1\|	1.1e-116	91.3	PREDICTED: 39S ribosomal prote...	[more]
gi\|802537161\|ref\|XP_012092846.1\|	3.1e-95	77.0	PREDICTED: 39S ribosomal prote...	[more]
gi\|1009162690\|ref\|XP_015899570.1\|	4.1e-95	80.7	PREDICTED: 39S ribosomal prote...	[more]
gi\|661887624\|emb\|CDP08755.1\|	5.3e-95	76.4	unnamed protein product [Coffe...	[more]

BLAST of Spo06706.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R7G2_SPIOL	1.6e-130	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FVG6_BETVU	7.6e-117	91.3	Uncharacterized protein OS=Bet...	[more]
A0A067LEG0_JATCU	2.2e-95	77.0	Uncharacterized protein OS=Jat...	[more]
A0A068UJQ9_COFCA	3.7e-95	76.4	Uncharacterized protein OS=Cof...	[more]
A0A022QU12_ERYGU	1.8e-94	74.0	Uncharacterized protein OS=Ery...	[more]

BLAST of Spo06706.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RM46_HUMAN	1.7e-16	36.6	39S ribosomal protein L46, mit...	[more]
RM46_PONAB	1.7e-16	36.6	39S ribosomal protein L46, mit...	[more]
RM46_MOUSE	1.7e-16	37.0	39S ribosomal protein L46, mit...	[more]
RM46_RAT	1.4e-15	35.3	39S ribosomal protein L46, mit...	[more]
RM46_BOVIN	2.1e-14	34.6	39S ribosomal protein L46, mit...	[more]

BLAST of Spo06706.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G14620.1	3.2e-82	64.0	decoy	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR13124	39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED	coord: 18..232 score: 4.8

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034968	histone lysine methylation
biological_process	GO:0009909	regulation of flower development
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome