Spo06885.1 (mRNA) | SpinachBase

Overview


Name	Spo06885.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Genomic DNA, chrom
Location	SpoScf_02272 : 10552 .. 12454 (+)
Sequence length	885

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTCACCATCATCATCTGATTCTGGTATCCACGCATCATTAATGTTCCAAGCAGCATCTTCCCATTCAGCATCTTCCTCCATTTTGTCTGAGCAGAAGAAGCCAAGTGCAATGAAGCTACCAGCCCCTGTTTTGAAGAAATGCTTTGTGTTTGTATATTTTTTGGTTCCTTTTTGGACAAAAAATTCTCTCTCCTGATGTATATAAAATTTTTGGAGGGAAAAGTCCCTTTTCTGCCAAAAATTTCCCCCCAAAAGTGAGAAGTCCCCACTTTTGTTGGCTGATCCATGTAATTTTATTGTTGTTTTCCTATTGGCTGTTGGATTTTTGGAATCAGAATTCTATTGGTTGGTTTTTGAGTTAGTGGATTGCTGAATTGACACCTTTTTACTTTTCTGATTTTCTCTCCTCCTTTTTATGATTTCTTTTTGTACTTTATACAATAAACAATTATCTACTTTTTCCTTTCCCCTAAAAAAACATTCATAATCATTACCTCTTACACACCATTCAATTTTATTAATTACCGTGTAAATGTCCAAAGTGGACACGTATTTAGGAACGGAGGGAGTACTACGTATAAGGTAAAAGTCACTTATTGTTTAATAATAGTTTTTTTTCTTTAATAAAAATTACCTCTTCAAAATCACTAAACCTTAAACCATATTCCCACGTGTCTTGTCAGATTCGTGTTTGTCTTCCATAAGGGAAAGATGTTATGTTAATTGCTTAAAGAATAAGCATGTTGATGTACTAGTCAACCCGCTATGTTCGTGCCAAATTTCTAAAATGATATTTATGCACGACCCATGACCTATAGTCATGCCTCCCGTGCCGTGCCCGGCACAGACAGATCGTGTGCTGGTCCGGGACCATACCCAGCCCTAGACCCCTAGTTGTCCTTAATTAACCTTTACGGCGCGTCACCTCCAAGGTCTGAGGTGTTCCGAGGCTCTCATCAAAATGGACACAAAGGGAACGGTTAAAGACGAGTCAAGGGCAATGCCCCACAAAGCAGTGAAATCCAAGTTTATTACCGTTAGATATTAAAATAGCCACAGGTTTCGAAAAAAACAAGAAGACAGCATATCTCTAATCTCTAATCTCTAATCTCTCTCCTATTGAGATTTTGAGATGAGCAGCACATCTCATCTCATCTAATCATCACTAGAGTCTACAACTAGATCAAGATCACACTCAGCTCTTTTCTCTCACCTCCATAAAAATGGCAGACTATGAAACTCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCAACCTCAACCCACAATAATCCTAAAAGAAACCGCAATTCAAACCTTAAACACAATAATCCAACTCCATTTCGAAAAAACCCTTGAGAAAAAACGAGCAGTAGACCTCCAAAAGAAACAACTTTGGAAGCTATTTCAACGCTTCTTCCTTTTCCTATCCCTCATCTTCGCTACCCTTTCGCTTACCACTCGGCTTCAATGCCGCCATTGTTGGATCCCAATCTTTCTCCTCTCCTTCTCCCACCTCATCTTCTATGTCTCTGTTGCACAAACATTAAGGTGTATCAATGGATTCAAATACCAAAGAAGATGTCATAAGCTTACACTTGGACTTGCTACTGACAAACTCAGGCAGCTTAAGATGGTTAAATTGATCGATGCTTCAGATCACGCTTCCTTTCGTGTTAATACTAATGGAGTTACTAATAATGATGATGATGATGATGATGAGGGTTGTTTTGTAAATGGGGATGAGTTTGAAATTCATTATCAAGAACCTCCTGAGAGTTATTTTGGTAAGTTTAAGAGAAATTGGGCTCTTTATTTTGGGTTTTTGATTTTGATTTATGGATTTATGGTTTCTTCCTCTGTTGTTCTTCTTTGTTTTTAG

mRNA sequence

ATGTGGTCACCATCATCATCTGATTCTGGTATCCACGCATCATTAATGTTCCAAGCAGCATCTTCCCATTCAGCATCTTCCTCCATTTTGTCTGAGCAGAAGAAGCCAAGTGCAATGAAGCTACCAGCCCCTGTTTTGAAGAAATGCTTTGTGTTTAGTCTACAACTAGATCAAGATCACACTCAGCTCTTTTCTCTCACCTCCATAAAAATGGCAGACTATGAAACTCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCAACCTCAACCCACAATAATCCTAAAAGAAACCGCAATTCAAACCTTAAACACAATAATCCAACTCCATTTCGAAAAAACCCTTGAGAAAAAACGAGCAGTAGACCTCCAAAAGAAACAACTTTGGAAGCTATTTCAACGCTTCTTCCTTTTCCTATCCCTCATCTTCGCTACCCTTTCGCTTACCACTCGGCTTCAATGCCGCCATTGTTGGATCCCAATCTTTCTCCTCTCCTTCTCCCACCTCATCTTCTATGTCTCTGTTGCACAAACATTAAGGTGTATCAATGGATTCAAATACCAAAGAAGATGTCATAAGCTTACACTTGGACTTGCTACTGACAAACTCAGGCAGCTTAAGATGGTTAAATTGATCGATGCTTCAGATCACGCTTCCTTTCGTGTTAATACTAATGGAGTTACTAATAATGATGATGATGATGATGATGAGGGTTGTTTTGTAAATGGGGATGAGTTTGAAATTCATTATCAAGAACCTCCTGAGAGTTATTTTGGTAAGTTTAAGAGAAATTGGGCTCTTTATTTTGGGTTTTTGATTTTGATTTATGGATTTATGGTTTCTTCCTCTGTTGTTCTTCTTTGTTTTTAG

Coding sequence (CDS)

ATGTGGTCACCATCATCATCTGATTCTGGTATCCACGCATCATTAATGTTCCAAGCAGCATCTTCCCATTCAGCATCTTCCTCCATTTTGTCTGAGCAGAAGAAGCCAAGTGCAATGAAGCTACCAGCCCCTGTTTTGAAGAAATGCTTTGTGTTTAGTCTACAACTAGATCAAGATCACACTCAGCTCTTTTCTCTCACCTCCATAAAAATGGCAGACTATGAAACTCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCAACCTCAACCCACAATAATCCTAAAAGAAACCGCAATTCAAACCTTAAACACAATAATCCAACTCCATTTCGAAAAAACCCTTGAGAAAAAACGAGCAGTAGACCTCCAAAAGAAACAACTTTGGAAGCTATTTCAACGCTTCTTCCTTTTCCTATCCCTCATCTTCGCTACCCTTTCGCTTACCACTCGGCTTCAATGCCGCCATTGTTGGATCCCAATCTTTCTCCTCTCCTTCTCCCACCTCATCTTCTATGTCTCTGTTGCACAAACATTAAGGTGTATCAATGGATTCAAATACCAAAGAAGATGTCATAAGCTTACACTTGGACTTGCTACTGACAAACTCAGGCAGCTTAAGATGGTTAAATTGATCGATGCTTCAGATCACGCTTCCTTTCGTGTTAATACTAATGGAGTTACTAATAATGATGATGATGATGATGATGAGGGTTGTTTTGTAAATGGGGATGAGTTTGAAATTCATTATCAAGAACCTCCTGAGAGTTATTTTGGTAAGTTTAAGAGAAATTGGGCTCTTTATTTTGGGTTTTTGATTTTGATTTATGGATTTATGGTTTCTTCCTCTGTTGTTCTTCTTTGTTTTTAG

Protein sequence

MWSPSSSDSGIHASLMFQAASSHSASSSILSEQKKPSAMKLPAPVLKKCFVFSLQLDQDHTQLFSLTSIKMADYETHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQKKQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDEFEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo06885	Spo06885	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo06885.1	Spo06885.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06885.1.exon.1	Spo06885.1.exon.1	exon
Spo06885.1.exon.2	Spo06885.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo06885.1.CDS.1	Spo06885.1.CDS.1	CDS
Spo06885.1.CDS.2	Spo06885.1.CDS.2	CDS

Homology

[Close]

BLAST of Spo06885.1 vs. NCBI nr
Match: gi|902235494|gb|KNA23938.1| (hypothetical protein SOVF_020540 [Spinacia oleracea])

HSP 1 Score: 428.7 bits (1101), Expect = 8.100e-117
Identity = 222/226 (98.23%), Postives = 222/226 (98.23%), Query Frame = 1


		  
Query: 71  MADYETHQHQHQHQH--QHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDL 130
           MADYETHQHQHQHQH  QHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDL
Sbjct: 1   MADYETHQHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDL 60

Query: 131 QKKQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCIN 190
           QKKQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCIN
Sbjct: 61  QKKQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCIN 120

Query: 191 GFKYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNG 250
           GFKYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNN  DDDDEGCFVNG
Sbjct: 121 GFKYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNN--DDDDEGCFVNG 180

Query: 251 DEFEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 295
           DEFEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF
Sbjct: 181 DEFEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 224

[Close]

BLAST of Spo06885.1 vs. NCBI nr
Match: gi|731338353|ref|XP_010680283.1| (PREDICTED: uncharacterized protein LOC104895467 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 283.9 bits (725), Expect = 3.200e-73
Identity = 156/224 (69.64%), Postives = 173/224 (77.23%), Query Frame = 1


		  
Query: 71  MADYETHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQK 130
           M DY++H            Q +    TII KE+AIQ+LNTIIQLHFEKTLEKKRAVDLQK
Sbjct: 1   MGDYDSHT-----------QTEVNTQTIIPKESAIQSLNTIIQLHFEKTLEKKRAVDLQK 60

Query: 131 KQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGF 190
           KQLWKLFQ FFLFLSLIFA+LS++TRLQCRHCWIPI LLSFSHLIFYVSVAQTLRCIN  
Sbjct: 61  KQLWKLFQLFFLFLSLIFASLSISTRLQCRHCWIPIALLSFSHLIFYVSVAQTLRCINAL 120

Query: 191 KYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDE 250
           KYQRRCHKLTLGLAT KLR L                  N + +++ ++  +  FVNG+E
Sbjct: 121 KYQRRCHKLTLGLATQKLRDL-----------------NNVIIHDNHNNAHDAAFVNGEE 180

Query: 251 FEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 295
           FEIHYQEPPESYFGKFKRNWALYFGFLIL+Y FMVSSSVVLLCF
Sbjct: 181 FEIHYQEPPESYFGKFKRNWALYFGFLILLYAFMVSSSVVLLCF 196

[Close]

BLAST of Spo06885.1 vs. NCBI nr
Match: gi|965663496|dbj|BAT79205.1| (hypothetical protein VIGAN_02204400 [Vigna angularis var. angularis])

HSP 1 Score: 273.1 bits (697), Expect = 5.700e-70
Identity = 153/224 (68.30%), Postives = 171/224 (76.34%), Query Frame = 1


		  
Query: 71  MADYETHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQK 130
           MADYET    H H H H + HQQP    + KETA Q LNTIIQLHFEKTLEKKRA+DLQK
Sbjct: 1   MADYET---SHNHNHHHSNHHQQP----VSKETAFQALNTIIQLHFEKTLEKKRAIDLQK 60

Query: 131 KQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGF 190
           K+L KLFQ FF+FL+L+F   S ++RLQCRHCWIPI LLS +HLIFYVSVAQTLRCINGF
Sbjct: 61  KELHKLFQIFFIFLALLFLAQSQSSRLQCRHCWIPITLLSIAHLIFYVSVAQTLRCINGF 120

Query: 191 KYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDE 250
           KYQRRCHKLTLGLAT+KLR++K ++L              G  N  D D      V  +E
Sbjct: 121 KYQRRCHKLTLGLATEKLREIK-IRL--------------GAANGGDYDG-----VADEE 180

Query: 251 FEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 295
           FEIHYQEPPESYFGKFKRNWAL+FGFLILIY FM+SSSVVLLCF
Sbjct: 181 FEIHYQEPPESYFGKFKRNWALHFGFLILIYAFMISSSVVLLCF 197

[Close]

BLAST of Spo06885.1 vs. NCBI nr
Match: gi|565368780|ref|XP_006351019.1| (PREDICTED: uncharacterized protein LOC102597320 [Solanum tuberosum])

HSP 1 Score: 273.1 bits (697), Expect = 5.700e-70
Identity = 144/204 (70.59%), Postives = 160/204 (78.43%), Query Frame = 1


		  
Query: 91  HQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQKKQLWKLFQRFFLFLSLIFAT 150
           H  P   +I KETA+Q +NTIIQLHFEKTLEKKRA+DLQKK+LWK+FQ FF+FLSLIF  
Sbjct: 10  HHHPN-NLIQKETALQAINTIIQLHFEKTLEKKRAIDLQKKELWKMFQHFFVFLSLIFLG 69

Query: 151 LSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLATDKLRQ 210
            +L+ +LQCRHCWIPI LLS SHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLAT++LRQ
Sbjct: 70  QALSPKLQCRHCWIPIGLLSLSHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLATERLRQ 129

Query: 211 LKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDEFEIHYQEPPESYFGKFKRNW 270
           LKM            R+N  G+               GDEFEIHYQEPPESYFGKFKRNW
Sbjct: 130 LKM------------RINNGGIEE------------IGDEFEIHYQEPPESYFGKFKRNW 188

Query: 271 ALYFGFLILIYGFMVSSSVVLLCF 295
           AL+FGFLI IYGFMVSSSVV+LCF
Sbjct: 190 ALHFGFLIFIYGFMVSSSVVILCF 188

[Close]

BLAST of Spo06885.1 vs. NCBI nr
Match: gi|357464519|ref|XP_003602541.1| (transmembrane protein, putative [Medicago truncatula])

HSP 1 Score: 272.7 bits (696), Expect = 7.500e-70
Identity = 148/224 (66.07%), Postives = 167/224 (74.55%), Query Frame = 1


		  
Query: 71  MADYETHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQK 130
           MADYE H HQ Q Q Q           ++ +ETA Q LNTIIQLHFEKTLEKKRA+DLQK
Sbjct: 1   MADYENHHHQQQQQQQQ----------VVSRETAFQALNTIIQLHFEKTLEKKRAIDLQK 60

Query: 131 KQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGF 190
           K+L KLFQ FF+FLSL+F   S++ RLQCRHCWIPI LLS +HLIFYVSVAQTLRCINGF
Sbjct: 61  KELHKLFQIFFIFLSLVFMANSMSPRLQCRHCWIPITLLSMAHLIFYVSVAQTLRCINGF 120

Query: 191 KYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDE 250
           KYQRRCHKLTLGLAT+KLR +KM +L    D+ +                     +  +E
Sbjct: 121 KYQRRCHKLTLGLATEKLRDMKM-RLSGGGDYDT---------------------IGDEE 180

Query: 251 FEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 295
           FEIHYQEPPESYFGKFKRNWAL+FGFLILIYGFM+SSSVVLLCF
Sbjct: 181 FEIHYQEPPESYFGKFKRNWALHFGFLILIYGFMISSSVVLLCF 192

[Close]

BLAST of Spo06885.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWV2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_020540 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 5.700e-117
Identity = 222/226 (98.23%), Postives = 222/226 (98.23%), Query Frame = 1


		  
Query: 71  MADYETHQHQHQHQH--QHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDL 130
           MADYETHQHQHQHQH  QHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDL
Sbjct: 1   MADYETHQHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDL 60

Query: 131 QKKQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCIN 190
           QKKQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCIN
Sbjct: 61  QKKQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCIN 120

Query: 191 GFKYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNG 250
           GFKYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNN  DDDDEGCFVNG
Sbjct: 121 GFKYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNN--DDDDEGCFVNG 180

Query: 251 DEFEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 295
           DEFEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF
Sbjct: 181 DEFEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 224

[Close]

BLAST of Spo06885.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C647_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133270 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.300e-73
Identity = 156/224 (69.64%), Postives = 173/224 (77.23%), Query Frame = 1


		  
Query: 71  MADYETHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQK 130
           M DY++H            Q +    TII KE+AIQ+LNTIIQLHFEKTLEKKRAVDLQK
Sbjct: 1   MGDYDSHT-----------QTEVNTQTIIPKESAIQSLNTIIQLHFEKTLEKKRAVDLQK 60

Query: 131 KQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGF 190
           KQLWKLFQ FFLFLSLIFA+LS++TRLQCRHCWIPI LLSFSHLIFYVSVAQTLRCIN  
Sbjct: 61  KQLWKLFQLFFLFLSLIFASLSISTRLQCRHCWIPIALLSFSHLIFYVSVAQTLRCINAL 120

Query: 191 KYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDE 250
           KYQRRCHKLTLGLAT KLR L                  N + +++ ++  +  FVNG+E
Sbjct: 121 KYQRRCHKLTLGLATQKLRDL-----------------NNVIIHDNHNNAHDAAFVNGEE 180

Query: 251 FEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 295
           FEIHYQEPPESYFGKFKRNWALYFGFLIL+Y FMVSSSVVLLCF
Sbjct: 181 FEIHYQEPPESYFGKFKRNWALYFGFLILLYAFMVSSSVVLLCF 196

[Close]

BLAST of Spo06885.1 vs. UniProtKB/TrEMBL
Match: M0ZXI3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003965 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.000e-70
Identity = 144/204 (70.59%), Postives = 160/204 (78.43%), Query Frame = 1


		  
Query: 91  HQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQKKQLWKLFQRFFLFLSLIFAT 150
           H  P   +I KETA+Q +NTIIQLHFEKTLEKKRA+DLQKK+LWK+FQ FF+FLSLIF  
Sbjct: 10  HHHPN-NLIQKETALQAINTIIQLHFEKTLEKKRAIDLQKKELWKMFQHFFVFLSLIFLG 69

Query: 151 LSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLATDKLRQ 210
            +L+ +LQCRHCWIPI LLS SHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLAT++LRQ
Sbjct: 70  QALSPKLQCRHCWIPIGLLSLSHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLATERLRQ 129

Query: 211 LKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDEFEIHYQEPPESYFGKFKRNW 270
           LKM            R+N  G+               GDEFEIHYQEPPESYFGKFKRNW
Sbjct: 130 LKM------------RINNGGIEE------------IGDEFEIHYQEPPESYFGKFKRNW 188

Query: 271 ALYFGFLILIYGFMVSSSVVLLCF 295
           AL+FGFLI IYGFMVSSSVV+LCF
Sbjct: 190 ALHFGFLIFIYGFMVSSSVVILCF 188

[Close]

BLAST of Spo06885.1 vs. UniProtKB/TrEMBL
Match: A0A0S3REU6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G204400 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.000e-70
Identity = 153/224 (68.30%), Postives = 171/224 (76.34%), Query Frame = 1


		  
Query: 71  MADYETHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQK 130
           MADYET    H H H H + HQQP    + KETA Q LNTIIQLHFEKTLEKKRA+DLQK
Sbjct: 1   MADYET---SHNHNHHHSNHHQQP----VSKETAFQALNTIIQLHFEKTLEKKRAIDLQK 60

Query: 131 KQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGF 190
           K+L KLFQ FF+FL+L+F   S ++RLQCRHCWIPI LLS +HLIFYVSVAQTLRCINGF
Sbjct: 61  KELHKLFQIFFIFLALLFLAQSQSSRLQCRHCWIPITLLSIAHLIFYVSVAQTLRCINGF 120

Query: 191 KYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDE 250
           KYQRRCHKLTLGLAT+KLR++K ++L              G  N  D D      V  +E
Sbjct: 121 KYQRRCHKLTLGLATEKLREIK-IRL--------------GAANGGDYDG-----VADEE 180

Query: 251 FEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 295
           FEIHYQEPPESYFGKFKRNWAL+FGFLILIY FM+SSSVVLLCF
Sbjct: 181 FEIHYQEPPESYFGKFKRNWALHFGFLILIYAFMISSSVVLLCF 197

[Close]

BLAST of Spo06885.1 vs. UniProtKB/TrEMBL
Match: G7JAX0_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_3g095480 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.200e-70
Identity = 148/224 (66.07%), Postives = 167/224 (74.55%), Query Frame = 1


		  
Query: 71  MADYETHQHQHQHQHQHQHQHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQK 130
           MADYE H HQ Q Q Q           ++ +ETA Q LNTIIQLHFEKTLEKKRA+DLQK
Sbjct: 1   MADYENHHHQQQQQQQQ----------VVSRETAFQALNTIIQLHFEKTLEKKRAIDLQK 60

Query: 131 KQLWKLFQRFFLFLSLIFATLSLTTRLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGF 190
           K+L KLFQ FF+FLSL+F   S++ RLQCRHCWIPI LLS +HLIFYVSVAQTLRCINGF
Sbjct: 61  KELHKLFQIFFIFLSLVFMANSMSPRLQCRHCWIPITLLSMAHLIFYVSVAQTLRCINGF 120

Query: 191 KYQRRCHKLTLGLATDKLRQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDE 250
           KYQRRCHKLTLGLAT+KLR +KM +L    D+ +                     +  +E
Sbjct: 121 KYQRRCHKLTLGLATEKLRDMKM-RLSGGGDYDT---------------------IGDEE 180

Query: 251 FEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMVSSSVVLLCF 295
           FEIHYQEPPESYFGKFKRNWAL+FGFLILIYGFM+SSSVVLLCF
Sbjct: 181 FEIHYQEPPESYFGKFKRNWALHFGFLILIYGFMISSSVVLLCF 192

[Close]

BLAST of Spo06885.1 vs. TAIR (Arabidopsis)
Match: AT3G18800.1 (unknown protein)

HSP 1 Score: 230.3 bits (586), Expect = 1.500e-60
Identity = 131/206 (63.59%), Postives = 150/206 (72.82%), Query Frame = 1


		  
Query: 90  QHQQPQPTIILKETAIQTLNTIIQLHFEKTLEKKRAVDLQKKQLWKLFQRFFLFLSLIFA 149
           Q+ QP    I KETA+Q LN+IIQLHFEKTLEKKRA+D QKK+L KLFQ FF+FL++IF 
Sbjct: 10  QNNQP---FIPKETALQALNSIIQLHFEKTLEKKRAIDHQKKKLHKLFQLFFIFLAVIFF 69

Query: 150 TLSLTT-RLQCRHCWIPIFLLSFSHLIFYVSVAQTLRCINGFKYQRRCHKLTLGLATDKL 209
           +LS  + RL CRHCW PI LLSFSHL FYVSVAQTLRCINGFKYQRRCHKLTLGLAT KL
Sbjct: 70  SLSQPSGRLHCRHCWAPICLLSFSHLFFYVSVAQTLRCINGFKYQRRCHKLTLGLATHKL 129

Query: 210 RQLKMVKLIDASDHASFRVNTNGVTNNDDDDDDEGCFVNGDEFEIHYQEPPESYFGKFKR 269
           R +K             R+         D D+         + E+ YQEPP+SYFGKFKR
Sbjct: 130 RFIKS------------RIAAGDFLGGGDGDEASAA---AWDLEVPYQEPPDSYFGKFKR 189

Query: 270 NWALYFGFLILIYGFMVSSSVVLLCF 295
           NWALYFGFLIL+Y FM+S SVV+LCF
Sbjct: 190 NWALYFGFLILLYTFMISFSVVILCF 197

The following BLAST results are available for this feature:

BLAST of Spo06885.1 vs. NCBI nr
BLAST of Spo06885.1 vs. UniProtKB/TrEMBL
BLAST of Spo06885.1 vs. ExPASy Swiss-Prot
BLAST of Spo06885.1 vs. TAIR (Arabidopsis)

BLAST of Spo06885.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902235494\|gb\|KNA23938.1\|	8.1e-117	98.2	hypothetical protein SOVF_0205...	[more]
gi\|731338353\|ref\|XP_010680283.1\|	3.2e-73	69.6	PREDICTED: uncharacterized pro...	[more]
gi\|965663496\|dbj\|BAT79205.1\|	5.7e-70	68.3	hypothetical protein VIGAN_022...	[more]
gi\|565368780\|ref\|XP_006351019.1\|	5.7e-70	70.5	PREDICTED: uncharacterized pro...	[more]
gi\|357464519\|ref\|XP_003602541.1\|	7.5e-70	66.0	transmembrane protein, putativ...	[more]

BLAST of Spo06885.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RWV2_SPIOL	5.7e-117	98.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8C647_BETVU	2.3e-73	69.6	Uncharacterized protein OS=Bet...	[more]
M0ZXI3_SOLTU	4.0e-70	70.5	Uncharacterized protein OS=Sol...	[more]
A0A0S3REU6_PHAAN	4.0e-70	68.3	Uncharacterized protein OS=Vig...	[more]
G7JAX0_MEDTR	5.2e-70	66.0	Transmembrane protein, putativ...	[more]

BLAST of Spo06885.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo06885.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G18800.1	1.5e-60	63.5	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36363	FAMILY NOT NAMED	coord: 231..294 score: 6.2E-91coord: 74..213 score: 6.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane