Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACACAACTCTTCGGCCTAAACTCCATCAATAAATACAAACTTGGTGAAACCAATGTTCTCCGTGCATTGCAAACCATAAACGTCTTTTAACTACTTCTACTCAAGGTACATATACTTTTTTTCTATCCTCTGAGTTGTGGCCGTTTGGTTTCATGATTTTCACGTTAAATAACTTTTAAGAGAAAACACAATTGTTAATTAGTTTTCAATTGTTATATTATTTGATTTTTTTAAAAAAAAGTTGTGAACCGGAGCGAAGAAATGCAAGTGCATGGGATATTATATATGGGTGGTCGGGAGGGGAGAAAAAAATATACGTAACTATGTAAGGAGTAGGGAAGGAACTCTTGGTAAATGAAATAAAAATGTTTTCTACTCTTGAAATACTATTTTCCATTTTTGATAGAATTTTTTTTTTTTTCAAAATTCCGTATTTTATGCGGCGTAATTATCAATTGCAATACTTTTAGGTAAAATAATCAATGGACAATGATGTTAAATTTCTAGGTCGTAGAAGTGTTATCGATCTTGACTAATTTTTTTGTTTATGTTGATTTTCTAGCAGCAGTCAATTAAGCTAAGCGTAACAATGGCTTCACTGCAACAAGCTCTGGTGAATGGAAAATTCAATGAGAAGCAAAAAGCAGCGATCGAAAAGGCGATGCAGAAAGCACAAAATATGGTAAACAACAACAAGAGTGCAAAGGATGAGGAACATGACTTGGCTGTAGTAATATGTTGTATGGAGAATATCCAGGTTCGACCAATAATGCATATGAAAACCCATGACATTCAAGGAAAATTCATGGCCAATGCCACCCCTACTAAGATGATAGGTGGAGAAACTGGTGGGTCGTTCGTGCATAAAGGAGCTTATTCGGAAGGACCGCTTCAAGTAGTTGTAGGCTCCAAGGGTGCAGTCATATATGGTACCATTGATAAGATGGTTCCAGGTCTTGGATATCTCTTAGCTTGGGACAGACCTGACGATTCCCATGCAACTAACAAGGTAAAAGAAATACCAATTTGTTAAGATCTGACCCATGAAACAACACGTGTGAAAGTCCCACATTGATAAAAGAGTAGAGAGTTAATCATTTAATAAGGCCAAGGGGAAACTCCCCTTATTTTCATATGGTTTTAAGGTGGAATCTCCTACGGTCTTGTTAAGTGGACAATATAGTTAACAAATGTGTGTATTGTTTGCAGGTGTATGTGGAAGCTGGTGACCCTAGCAAGCTGATGAAAATGGAGTGGAGTGAAATTCAAACAAAAATGAATAAATCAGACACCTACAGTGAATTCTTAGACAAAGACACAGGTGCTTCAGCCTCTGCTGAACTTAGGTACATTGGCAATAATGCGGCTCTCGTTGATGCCAACTTCGATCGTGTCGTCGCTAATTAATTACTCGATTGTCTGAAATTTAGTCTAAGGGGCACCTAAGACTTTTTCTATTATGCAACTTATTTCGTGTTTACTGTACGCTTTTCAATAAATAAAGCCCCTTGGATTTGTAATGTACATTAGATCATGAAATTGAATATAATACTATTAAGATGATAATAAAGGTCGTAAGTTGCGACAACATTTATATGTCTCAATCTTACGTGTCAGAGTTTAATTGATACATATATGCGCC TACACAACTCTTCGGCCTAAACTCCATCAATAAATACAAACTTGGTGAAACCAATGTTCTCCGTGCATTGCAAACCATAAACGTCTTTTAACTACTTCTACTCAAGCAGTCAATTAAGCTAAGCGTAACAATGGCTTCACTGCAACAAGCTCTGGTGAATGGAAAATTCAATGAGAAGCAAAAAGCAGCGATCGAAAAGGCGATGCAGAAAGCACAAAATATGGTAAACAACAACAAGAGTGCAAAGGATGAGGAACATGACTTGGCTGTAGTAATATGTTGTATGGAGAATATCCAGGTTCGACCAATAATGCATATGAAAACCCATGACATTCAAGGAAAATTCATGGCCAATGCCACCCCTACTAAGATGATAGGTGGAGAAACTGGTGGGTCGTTCGTGCATAAAGGAGCTTATTCGGAAGGACCGCTTCAAGTAGTTGTAGGCTCCAAGGGTGCAGTCATATATGGTACCATTGATAAGATGGTTCCAGGTCTTGGATATCTCTTAGCTTGGGACAGACCTGACGATTCCCATGCAACTAACAAGGTGTATGTGGAAGCTGGTGACCCTAGCAAGCTGATGAAAATGGAGTGGAGTGAAATTCAAACAAAAATGAATAAATCAGACACCTACAGTGAATTCTTAGACAAAGACACAGGTGCTTCAGCCTCTGCTGAACTTAGGTACATTGGCAATAATGCGGCTCTCGTTGATGCCAACTTCGATCGTGTCGTCGCTAATTAATTACTCGATTGTCTGAAATTTAGTCTAAGGGGCACCTAAGACTTTTTCTATTATGCAACTTATTTCGTGTTTACTGTACGCTTTTCAATAAATAAAGCCCCTTGGATTTGTAATGTACATTAGATCATGAAATTGAATATAATACTATTAAGATGATAATAAAGGTCGTAAGTTGCGACAACATTTATATGTCTCAATCTTACGTGTCAGAGTTTAATTGATACATATATGCGCC ATGGCTTCACTGCAACAAGCTCTGGTGAATGGAAAATTCAATGAGAAGCAAAAAGCAGCGATCGAAAAGGCGATGCAGAAAGCACAAAATATGGTAAACAACAACAAGAGTGCAAAGGATGAGGAACATGACTTGGCTGTAGTAATATGTTGTATGGAGAATATCCAGGTTCGACCAATAATGCATATGAAAACCCATGACATTCAAGGAAAATTCATGGCCAATGCCACCCCTACTAAGATGATAGGTGGAGAAACTGGTGGGTCGTTCGTGCATAAAGGAGCTTATTCGGAAGGACCGCTTCAAGTAGTTGTAGGCTCCAAGGGTGCAGTCATATATGGTACCATTGATAAGATGGTTCCAGGTCTTGGATATCTCTTAGCTTGGGACAGACCTGACGATTCCCATGCAACTAACAAGGTGTATGTGGAAGCTGGTGACCCTAGCAAGCTGATGAAAATGGAGTGGAGTGAAATTCAAACAAAAATGAATAAATCAGACACCTACAGTGAATTCTTAGACAAAGACACAGGTGCTTCAGCCTCTGCTGAACTTAGGTACATTGGCAATAATGCGGCTCTCGTTGATGCCAACTTCGATCGTGTCGTCGCTAATTAA MASLQQALVNGKFNEKQKAAIEKAMQKAQNMVNNNKSAKDEEHDLAVVICCMENIQVRPIMHMKTHDIQGKFMANATPTKMIGGETGGSFVHKGAYSEGPLQVVVGSKGAVIYGTIDKMVPGLGYLLAWDRPDDSHATNKVYVEAGDPSKLMKMEWSEIQTKMNKSDTYSEFLDKDTGASASAELRYIGNNAALVDANFDRVVAN Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo07022.1 vs. NCBI nr
Match: gi|902115401|gb|KNA03877.1| (hypothetical protein SOVF_204970 [Spinacia oleracea]) HSP 1 Score: 319.3 bits (817), Expect = 4.900e-84 Identity = 161/205 (78.54%), Postives = 182/205 (88.78%), Query Frame = 1
BLAST of Spo07022.1 vs. NCBI nr
Match: gi|902224735|gb|KNA19862.1| (hypothetical protein SOVF_056640, partial [Spinacia oleracea]) HSP 1 Score: 234.2 bits (596), Expect = 2.100e-58 Identity = 117/141 (82.98%), Postives = 129/141 (91.49%), Query Frame = 1
BLAST of Spo07022.1 vs. NCBI nr
Match: gi|902228200|gb|KNA21017.1| (hypothetical protein SOVF_046510 [Spinacia oleracea]) HSP 1 Score: 224.9 bits (572), Expect = 1.200e-55 Identity = 120/202 (59.41%), Postives = 154/202 (76.24%), Query Frame = 1
BLAST of Spo07022.1 vs. NCBI nr
Match: gi|902230131|gb|KNA21725.1| (hypothetical protein SOVF_040700 [Spinacia oleracea]) HSP 1 Score: 199.1 bits (505), Expect = 7.300e-48 Identity = 116/201 (57.71%), Postives = 141/201 (70.15%), Query Frame = 1
BLAST of Spo07022.1 vs. NCBI nr
Match: gi|756179886|gb|AJK93578.1| (jasmonate-induced protein [Suaeda glauca]) HSP 1 Score: 177.9 bits (450), Expect = 1.700e-41 Identity = 102/203 (50.25%), Postives = 137/203 (67.49%), Query Frame = 1
BLAST of Spo07022.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9B3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_204970 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 3.400e-84 Identity = 161/205 (78.54%), Postives = 182/205 (88.78%), Query Frame = 1
BLAST of Spo07022.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLZ9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_056640 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 1.400e-58 Identity = 117/141 (82.98%), Postives = 129/141 (91.49%), Query Frame = 1
BLAST of Spo07022.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQ85_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_046510 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 8.700e-56 Identity = 120/202 (59.41%), Postives = 154/202 (76.24%), Query Frame = 1
BLAST of Spo07022.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RQC2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_040700 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 5.100e-48 Identity = 116/201 (57.71%), Postives = 141/201 (70.15%), Query Frame = 1
BLAST of Spo07022.1 vs. UniProtKB/TrEMBL
Match: A0A0C5AU63_9CARY (Suaeda glauca jasmonate-induced protein mRNA OS=Suaeda glauca PE=2 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.200e-41 Identity = 102/203 (50.25%), Postives = 137/203 (67.49%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07022.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07022.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07022.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo07022.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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