Spo07171.1 (mRNA)

Overview
NameSpo07171.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
LocationSuper_scaffold_183 : 77369 .. 88158 (-)
Sequence length1112
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGTTTTGGAAGTCTTTTCTTCTCTATTCAGAAAATGCATGTATGCGTTTGTTGAAGATTTTTTTCTAGATTTCTTCCTTCCTGGCTTTACAATTGATAAATTTAGTGCTCAAATATTTATAATGAAAGAATGAATGTGAGACGGTTCAACAAGAGTTAATATTTTTTTTGTTTGTAAATTACGAGTTGTGTATTCAGAATAAATTCTTTATCATAAGCATGCTATAGAGCTTTAAGTTTATAGAGTCAACATCCTTAACTGCATAATTCTCGTGGTATGTATAAGCGATGTTTACAGAATCAACAACGTTTTGCAGGTCATAACTCTTTATTTGTTGATTGTTTTTTGTATTTTATAGGCGATTATTGTGATGAAATGGTTGGTGCTATGTTGTGATTACTGTATGATTTTATTTATGGGAGGGGATAGGTCACGATTCCTTACGGATGCAACCATGTAATAGTCCTTAGGATCTTTATCAGCAGTAACAAGAACACCGATTTCTAATTTGTTGAATTTTTTCTATGCCTCAGATTTGATCGCTATTGGAAGAAAATTGAAGCATTTATTGGCTCAAAGACTGTTCTTCAGGTACAGATTTGAGATCTTATATTTTCAGATATTCCGATGATGGGTTTGGAACTTCTCCGAAATTATCGCCATGTGCTGTTGAACATCCATGATTAACCTTCTGGACTTGAGTTTTGGTTCACAATAAGGTGTTTTTACTTTAATGCATACGTGTGTACACAGATTGTGGGCTAGTTTAGTTTTAGTTTAATAATCGACCTACATGGTGGTGGTTATAGGTTTTTTTGTCCTCGAATCTAAGATATATATATGAGATTAAAGGAGCATCTGGCGACTTGCATTCCTTTGTATTTATTATGTTGTTTCCAACTGATGTTTAGTAACAACTTGTTAGATTTTGGGGTTGAAAAGCTATAAGCAATTACATTGTTGTTCATTGGAGCACCTTAGATTGTATTTTCTATGATGTTGGTGAGCCGGTATTACTCTAGCTAATGTGCTTAATCTAGGCCTTCTTTTTCTCTAATGTGAGCTGGTGGATCATATCACGAATTTATGACTTTGCAGATTCGTAGTCATACCCCCAAAAAGCATCTAAGATATGTTAGGATGCATCTTACTAGCATTTACTTCTTACTGGTGACCTTTGTTTGATAACTTGTAATTCACACACCTGTATTTTTTGTTTTGCAGCTTCAACGGCACTAGTCTTTCTACAGGACAGTATCAGGATTCACCTATTTGTGTTTTGAAACTGGGGTATGTTTACCACCGTGACCAAACATCAGTACTCACTAATCAAAGTGGCAGTGCTCCAACATCGCCCTGGACTTTTGGGTCTATGCCGGTTGTCAAATCAGCAAATATGGGAAGAGGTAGTTTTATAGAACCGAAACTCTGGTATAGGAAACAGAATATAGGGACTAGCTATTTAAGAACATGAGTATCTAGCTACACAAATTAAATGTGACTGGACTTCATTAAGAAATAGAAATAATGTAGTTAAGAATCGAGGATATATTTTTGATTTTGTAAAATATCGTAAAATGTTGGCCCGTGTTATGAAAAGTTGGGATTTTTGTTTGAAAGTTTACGTGAAATGAAACTGTATTCTGGTGAGTCTTCCCTGCAGATGATGCTACATTAGCAATGTCGATGACAATCATTGATTGCAACAGTAACAACAATGAGAGTAGAAGCACTTGGCCTACAGTTCTTACTATGGACCAGAAATACACTTAAAGGTTGGGATTTCTTATCATTTCATTCACAAGAGAAAAACATTCCAATGCAACCATACTTTACTTAGAGGTGAGAAAAGGCCTCCCCAACACCCTCTAAGCAACAATAACAAAACAGACAAGCAAAGAAAACTCAAACAAAACTAAACAATTACAGGATATGTTTCCATGTAAAAAACCAACTAATTTTGGTCCTAAAATATGATATTTTTTTCAGGCTAGTTAGGAGTAAATTTTGTTCTCAAAGTTTGAATTGAAGTTAAGTTGATGTAATTGTCTACAACCTTGAGTTAGTTAGAGGAAGCTTGTTTGGTCCAAAGTTTTGAATTAGTTCACTAATATTTGGAGGATTTATAGGTTTTCCTTAGGTTCGAATGAACAAAGAGTTTTAAGTGACCTTTGGCGGTCTACATTACATTAGTTCATACTAAGCATATGTTATAGTGACTCCTCAATGCGTCAACACTCATATAATTCCATCTGTACTAGAGATTATCCCACTGTCCTGGTATTATTTTTTATCATATAGTTAGATAATTCAAGTTGCCTGATTACTTGGTTTGATAGAGAATGAATGAAATTACAAGATCGAAGTGAAGCAACAATCAAATGCTCGTGTTGACTTCGTAACTTTGATTGATCATTTCTATTATGTTCCTTAATTTTTTTTTGAATGGTTTGAATGTTACCTGTTCAAAACACCATTATATACTTTCCTCATCTATCCAGATTTTCCCAAAGTTTTGCTCGTTCAGGCTTGTTTTCCCTAAGATGGGAAACTTGGTTACTTTTCTTTTTGATTATATGAATACACACTTTGGGTTTAGTTGCAAAAAACATAGAGAGAACCTTTTTCTATTTAGTGTAACTAATGCATCTTGATTTACATTTCATGTTGGAGCTGTGAGTCTGTGACCGTAGAATTGTATTTTAATAAGTTAACTCTCTTTTCTTTACAACATTCTTAGGAATTCCTAAAGATTACGTGATTATATCAAAAATCTGATGTACTGAAAGGAAATATTTTTATAATCACCTCATGTTTCCTGTTTTTTCCGTCTCTTTTTGGGGTTCAGAAATCTGCTTCTATATAATCTATTCACATGATAAAACAGTCTAGGATTTTCATATCTAATCACAGAGTTACTATTGTTGTGTGTGTGTTCTTGATATACATCTTCTAACTAAAGCTAGAAAAAGATCGGATAAGCCATTATATTTGAATTTGGAATCGGAATTTCGGATGTATCTTGTTTCAAATTACAAAACCAAAACCTATCACTTGGGCTAACTTCCCTCCCTATGTCTCTGCTAACTTTCTAAGTATATTAATTATAGTATATATTGACCATATGTTTCCTATGATCCCTTCTTTGGCTTGCCCTTGGCCTGGCTTCACTAAACAGTTTTGGGCCTTCTTGAGTAATTCAATTTTGTATTTTTCTGCTGGGGAAGCAATCAGTTGCATGCACGCATATATACACGTCCTCTACCACTAGCTCTAGCTAGATTAATTATGTGTTGAAGCTACTATAAGTTTTTAACAACAACAGCAATCATAAGATGATAAAAGAGGAGCCAATACATCCTTGAAGGAGCACTGAAAAAACCAGCCAAGTCTCCCCTCTCATTTCTTAATTTGTGTTTTACATTGATGAAACTTAAAATGTTTGGCTGGTTATGTTTGGTATGTACATCTGGTTGCATGGACTATATATGTTGGAGTTTATATTTTAGACACGTGTTTAAAAACACAGCATATTCATATCTAGAAATGCCATGTTATAGATGTTATGTTGCTGTTTCTTTTGCTGCATTGGTTGGTTGTCTAATTCCACCAAATAATCACCTGCCTATTGTTTAAGGTTAGCAGTTAAAACTGCTTCTAGACCTATGCTTGTCTATGCCAATTACCTATTCCTATGTGCTGACAGTTAACCTCCACTTGATTGTTGCTGGCCACTACATGTGCCTAGAACCTCTGCATTACTTTAAAAGTATCTGGTATTGTACTTCAGTTACTTTAGGGCCAAGCTTCCTCTCTTGTGTGTTCTAGGGAGCTTACCACAGTACCACCTTGCTTATACTTGATCAAATGAGGGGGATCTCTATCATATACAACTTTGAAGGGGGTACAAAGGGTGGAAGTATGGAACGTTGTATTGTACCAGTACTCTGCCCATGCTATCCAATTTGCCCAAGTCTTTGGCTTCCCTCCTATAAAACACCTAAGGTAGGATTCCACTCATTTGTTCACCACCTCAGTCTGTCCATCGTTGTACTTCTGTTGACACAGTTCTTTCTTGCCATATACTATACAGAATATGACACAGATTTAGGTAGGATAAAAACCAGATTCTTTCTTGCCATATTTTGTACAGAATATGACACAGATTTAGGTAGAATATTTTGTATACTGAAATATGATACCACATGTAGAATAATCTGTCACTTCTCATCTTTGTTTCCTGTTTTTCTGCGTTTATGAGCTTATTGATGCTAGTATACTTATATCATTTTGAAGCGCTGATTACATTTCTTATAATGGTACGAAGCATCCGCTAATGTTGTTTGCCTAAAGTTGTTTGCCTAAAATTGTTTTAAGGTTGTACAAACGAGGTTTCACTTTTTAAAAAAAAAATAGATTGCTTGTTTACCAAAACAAATTTGACATATTAGAGTTTCTTTGCAGATTAATGATGATTCAAGTGGTAATGGTGAAACGTAACACTTCTTTTTAATAGATTGTTTGTTTACCAAAATAAATTTGACATATTAATTTTTCTTTGCAGATTAAGGATGATTCAAGTGGTAATGGTGAAACGTAGATGAAGGGATCAACAAGTTATCTTCAAGCTAAGCTATAGTAGCGATAGGATTTACTCGCTTAATTAGTACTTAGTTAGGAAGATGTTTAGTTTTTTTACTATGTTGATTAGTGTAGAAAAATATGGTAGAACGTCGTTTTTGTTTCAAAATATTTCTTTTATTTCAGTTTGAGTCGACAATGCAAATTAATGAGTGAATAATTGTTAGCATTTTTTGTAAACTACATTGTCGTTAATTCGTATAAATTAGATGAGTTATGTTGTTTTATGATAATGTAGTACATTAATATTTAAAGTTTTATTTTTCATTATATATGATTTAATATATATTTTGGAGATATATGCAATCATGGTATTATTAATAACTATTTTATTATTATGCAAAGGAATGAAGAACAATGGTTTGAATTTGTGACACTTAGAAGGGTCTAAATTTGTTTGACGGAAAAATATTGTATCAAATTGTGACCCTCAGAAGGGTCTAGATTTGGGGGAACAAAAAACGTAAACACAAGAAATGACGGAGCAAAGGGTCGAAAGCTGCATCTGTGTTGCGCGAAAGTAGAGTAAATAGCAACCCCATAGAGAGTCGAAAAATTTCGACCAAATGAAGCGTCGAAATATGGCAACTAGTGACTACAAAAAGCGTCAAAAATCGAGCAATTAGCGAAGCTTTAAAGCGTTGGGATATATCGACCATGAACATTTCGACGCTTCAAAGAAGCGTTGAAATACAAAATTTCGGTGCTTTAAAGCGACGATATATGGCCAAAAAAGCGTCGAAAAGTGTCGTGTTTTTCCGTAGTGACCAATATTACATTCAAATTAATGGTACGCATACCATATTTTCTATCCTATTTGGGCCATACTAGTCACTTTCCATAACCTGCAAAACAGTACATTTACAATATACCATTCACCCATTCATTTATCAATGAATGACCCACATAGCAAGTTAGTAGAAACAAATCATGCATCACAGAAACATTTGCAGCAACTAATCAAAGGGTTCCAATAATCTATAAATCACTAGTAGAAAAATCGACATGTGCTTCCCTTCATGTGCGGCTCGTTTAGTAAATTGGCAGCACTTAAGAGGGAAAAATATATACATTTTTACAAGTGCGGGCTCATTTTAGAAAATTGGCAGCACTTGAGTCCAAGTGCGGGCATATTTGTAAAATGAGCCGCACAAAACATTTCTAAAAACGTTTCCCCATTTTTTTTTCATTTCCCGCTTATCCTCATTCCTCTTCTCTGGTTACTTCTCTTCCCTCTTCTCTCCTCCTTCTGTTCGACTCCTTCCCCGAATTGCATTACCTTAGTTTTCCCGAACTAAGGAATCCCTTAGATATGATGCAAAATGTCTCTGGTTCTCTAGTCGCGAAATCCAACACTTACATCACTCACAGCATACACCGCACGACTACCCGCGTTGCCGCTGCTGTTCCCCCACCGGCAAAATCGTCCTCTTCCCGCCGCCGCCGCAGCACACAGGAGTCGCTCCTCCTTATCTCTTATAGGTTTGTAGTTTAAATTTAATTATTTGTTCCTATAATCTTGTTAGTTTATTGACGAATGCCTAATTTTTCAATGTTTTTCGATTGTGTGCTCGTTTTGCTTCTACCTTCTCCCAGATCGAACTAATTCAGGTTTGTTCTTCGATTTTTTGTTTTCATTTTTTTTTTGACGATTCTTGTTTCTGATCTAATGCTTTGCATTGAGAAGTTCAATTCTAGTGTTTTTTGTGTAATTATTGTTAATTTCTCTTAGCTTTTGATTTTTTAGGGCTTTGTTTTTATTTTTTAACTTTTTTTATTGTTCGAATTGCGATTGTGTTCAATGGTGATGTATGATGGGTTTATATTGTTTGATTTTGGAATTTGTTGATGGTTTTGGATTTGAATTAGATTTTGTTAGCTGTACATGAACTAAAGGCTGGACTTGAATCAGCCAGAGTTGTTCCAAAACTTCTAGCTGAAAAATATTCAATGGATAGGTAATAAATTCAATCTGTAAATTTGAAAATCGACTAGCATCGGGGTGTTGCCGTCCAAGGAATAACTGAATAAGTTTGCTAATTACATCATTAAATGAGAAACTTTTTAGAAGTTGAGATCACTAGGCAGCTTGAGACCCACTCTCAAATCCCATACTGTTACCTATTATAAATGAAATTGTTAGTGAATTCTGGAATGTCAAGTCAGTCTTTGTTCAAAAAAAGTCAGTCCTATAAGCGATGATGTTTATTGCTATTAGTCGTCAATTGTAGTGATGATATTTTGATTTTATTGCTGTTAATCGTCAATTGCAAATGAATTAGAAAATATTTTTATGCAATTCGTTGTATTTTATTGCAATTTGTTGTACTTTATTGCTATTAGTCGTCCATTGTGGTGATGTTATTTTGATTTCTATGCTAATTGGTATCATGGTTGAGATGAAGCTTACATGAGATGCTTGCATAAATGCGAGCTTTAATTACACAATTATATGGGTGTGGAAGATGTTGTGGCTTAACTGAAATCTACTTCAGGTGCACATATGTCAAATTACTGGTAGTTTCAGTTGTTCTTTGTCCTGTAGTAACACTAGGCAGTAATTTCATCCTCACGTATCTTGCAGTAAGACTAGTTAGTAGTTCAACCTTATACTTTCTCCTGAAGTAAGAGTTGTAAGTAGTTTCAGCCTCTATTTGTCTTGCAGTCAGAGTAGCAGTAGTTTCAGCCGTGCTTCGTCCTACAGTCAGAGTAATCATTAGTTTCAGCGGCGCTTTTTTCCTACAGTATAAGTAGTAAGTAGTTTCAGTACAAGATGCAGTGTTGAATTTATAAACCATTATTTTTTAGTCATGTGACTTTTACGAATGATTATTTTGGTTTTGATGTTGAATTTTGTTTCTAAATGCTCATGTTGTTAAGGTTCCTTGCAAGAACGAAGAGCTTCAGGAACTTGTTGAGCATTTTAATGTCAGGAACTTGTAGAGCATTTTAATGTGCGTTTGGCCTTACACATGTTACTTATAGTTTTAAAAATCAAACTAGTTTTTCTAGATGGATCTCTCATCGAAATCAAACTAATTTATCCATTCAGTTCTACTCCTATGCATGCTTCCGCAGTCAAAATCCATTTGTGTGCTTGCTGTAAAAAGAAATGATCTTATCTTTAGCATTAGACCCTATTGACAATCTAGATTATCCGTGCCTGCATTTTATTTTATTTGTATAGTAGGTTGTTTTGTTAGTTCCTAGACGCCTCTCTGATTTGCTGCTTACGGTCTTCAAACTACAATGCAGGGTGACCTTCCTGGCCGCAGAAACATGTTTGGTAGCCTGTTCAATTAGAAATGCATATCACACAAGGTGCCAAGGAATCTTTGGTCAAGAACATTTATCACGCGCCACACATTTATCAAGGTGCATGGGGGGCTGTTGCAACTACAATGACATTGCTGTCAATGATTGGGTATGTCGTCTATTAATGAATCCACTCCAAGGATGACTCTGGTGCGACGTGGTTGGTGGAGACATCAAAATGAAGGTATCGGTAGACTTTAAGTTGAACACTTTAAGTTGGTTAGTCTGTATGGGTGCTTGTCTGTATGTGTATGCTTTCAATTTCAATGAATTTAGTACTAATTGGTGTTAATCTAGGGCTGTTGTAGTCTGTTCTACTGGGTTTATAATTTTGGTTTCGTCTGAGTTTTTGCTGAATTATGTTATGCTTTCTGTATTCTATTGTGGTCTGATCTATACATGGTCTCTTGTTGTTGCATGCCTTGGTAATTTTCTACTGTTGTTTTGTTGTCCCAGTCATGTCTTCATTTTACATGTTACGCATCTACTTTTTTCTTTTAGTTATTTTCATGTTTAGTATTTTAGTTTTTCCATTTTCTGATTTATGTGATTGTGCATCTGAAATTAATATCACGAGAAAAAAGTTTTTAAAGCGTTTTTAAAGCCTAAAATCAGTTTCTGGTCGTGTACATATTTCGTGTTTTTTATGTTGTTCTGATCTGCACATGTTATGAGTTTATGTACTGATGCGCTGCATTCTGAATTGATGCTTGCTGATCTACACTGATGCATAATGGTCTGCTTGGTCTGTTAATGGTCTGCTTGGTCTGTTAATATTCAGCTGACCAAATCTGCTTTCTACTGCTGACATAAGTTGACTTAGGTTTACTTTCTAGTGAATATAAGGCAACTTTGTTACAACTTAATAATGCAAGTGGGTTAGCTCAAAACATACTTTCGTGAAAGCAAACAAACACCTACATTGATCCAATAAACCTTCAATGTGTGTAACTAGCCATAACTAGGTGACATTGAGTTGAAAGTTGGGAGCAAAATGATCCATTTTAGTCAAAATATGACCAATAATGATCAAACGAGCCTTAAATGTGCATAACTTGACCAACTTAGGTGAGAATGAGTCTTAGAAATATAAAAATAAGTACATTAAACATGTAAAGGGTTTTAAATACTTATATAGCTTCATTAGTTGAAAGTTGGGAGCGAAATAAGCCATATTAGTCAATATATGACCTATAACGATCAAACGAGCCTTAAATATGCATAACTTGACCAAAGTAGGTGAGAATGAGTCTTAGAAACATAAAATAAGTATGTAAAACATGTAAAGAGTTTAAAATAATCATTAAGGTTCATTAGTTGAAATTTGGGACTGAAATAAGCCATTTTAGTCAAAATGTGACCTATAATGATCAAACGAGCCTTATATGTGTATAAGTTGACCAAATTAGGCTAGAGTGAGTCTTTGAAACTTTAAACTAAGTCTAATGAGCATGTAAAGGGTTTAAAAACTTATTTAAGTTCAGTAGTTGAAAGTTGGGTGCGAAATAAGCCATTTCACTCAGAATGCGACCTAACGATCAAACAAGCCTTATATGTGCATAGTTTGACCAAAGTAAGTGATAATGAGTCTTTGAAACATAAAAATAAGTTTATTAACCTTTTAAAGCATTAAATACTTATTTAAGTTCATTAATTGAAAGTTAGGAGCGAAATAAGCCATTTTAGTCAAAATATGAACTATATTGAACGAACGAGCCTTGAATGTTTATAACCAATGTGGGTGATTATGAATCTTTGAAAAACAAATGTAGGTTATTTAAAAATATGAAGGGTTTAAAATACTCATTTAGGTTCATTATTTGAATATTGGGACCGAAATAAGCCATTTTTGTCAAAATGTGACTTATAATGATCAAACGAGCCTTAAATGTGAATAACTTGATCAAAGTAGGTGAGAATGAGTCTTTGAAACATTAAACTAAGTCTAATGAACATGTAAAGGGTTTAAAATACTTATTGAAGTTCATTAGTTGAAAGTTGGGAGCGAAATAAGCCAATTTATTCGGAATGTGACCTATAACGATCAAACAAGCCTTATATGTGCATAACTTGACCAAAGTAGGTGGTAATGAGTTTTTGAAACATAAAACTAAGTATATTAAACATCTAAAGGGTTTAAAATACTTATTTAGGAAGTTGGAATCGAAATAAGCCATTTTAGTCAAGGTGGCCTATAATGATCAAACGGGCCTTAAATGTGGATAATTTGACCAAAGTAGGTGAGAATGAGTATTTGAAACATAAAACTAAGTATGTTAAACATGTACAAGGTTCAAATTACTCATTTAGGTTCATTAGTTGAAAGTTAGTACCGAAATAAACCATTTTTATTATTATACTGTTCATTATTTCATTGTTAGGAGCAAATTAAGTCTTGCTTTATTATATGATATAATATTTTAATATAACTAAAGTATATTTTTTTTTTGATGTTCGATTCTGTTAAGGTATTCAACAATCCGAGGGAGCAGCCTTTCACCACCATGGAGATAAATGAAGTTCGAGACAAGTTGAAAAACTTCATTACTAGTGATTATCTTTGATATTTTCTTGTAATGAATCATAGATTATGAATGCTAGTTTTTCATATGATTGTAATGTACTCGACTTTTAGATTCACAATTATACTATTTTATTTAATTATCTATATAATTGAATTTTTTTTATCTGATGTATGGAGGGTAACTAATGGCGTGGACCAGTTGTATAATACATGTAACAAGGAAATATAACAAATTTCTAGATCAGGTGCTGCTCATTTTTAGGCCAAGTGCGGCTCATTTATAAGCCAAGTGCGGCTCATTTTATG

mRNA sequence

ATGTTGTTTTGGAAGTCTTTTCTTCTCTATTCAGAAAATGCATATTTGATCGCTATTGGAAGAAAATTGAAGCATTTATTGGCTCAAAGACTGTTCTTCAGCTTCAACGGCACTAGTCTTTCTACAGGACAGTATCAGGATTCACCTATTTGTGTTTTGAAACTGGGGTATGTTTACCACCGTGACCAAACATCAGTACTCACTAATCAAAGTGGCAGTGCTCCAACATCGCCCTGGACTTTTGGGTCTATGCCGGTTGTCAAATCAGCAAATATGGGAAGAGGTAGTTTTATAGAACCGAAACTCTGTTTTCCCGAACTAAGGAATCCCTTAGATATGATGCAAAATGTCTCTGGTTCTCTAGTCGCGAAATCCAACACTTACATCACTCACAGCATACACCGCACGACTACCCGCGTTGCCGCTGCTGTTCCCCCACCGGCAAAATCGTCCTCTTCCCGCCGCCGCCGCAGCACACAGGAGTCGCTCCTCCTTATCTCTTATAGGGTGACCTTCCTGGCCGCAGAAACATGTTTGGTAGCCTGTTCAATTAGAAATGCATATCACACAAGGTGCCAAGGAATCTTTGGTCAAGAACATTTATCACGCGCCACACATTTATCAAGGTGCATGGGGGGCTGTTGCAACTACAATGACATTGCTGTCAATGATTGGGTATGTCGTCTATTAATGAATCCACTCCAAGGATGACTCTGGTGCGACGTGGTTGGTGGAGACATCAAAATGAAGGTATTCAACAATCCGAGGGAGCAGCCTTTCACCACCATGGAGATAAATGAAGTTCGAGACAAGTTGAAAAACTTCATTACTAGTGATTATCTTTGATATTTTCTTGTAATGAATCATAGATTATGAATGCTAGTTTTTCATATGATTGTAATGTACTCGACTTTTAGATTCACAATTATACTATTTTATTTAATTATCTATATAATTGAATTTTTTTTATCTGATGTATGGAGGGTAACTAATGGCGTGGACCAGTTGTATAATACATGTAACAAGGAAATATAACAAATTTCTAGATCAGGTGCTGCTCATTTTTAGGCCAAGTGCGGCTCATTTATAAGCCAAGTGCGGCTCATTTTATG

Coding sequence (CDS)

ATGTTGTTTTGGAAGTCTTTTCTTCTCTATTCAGAAAATGCATATTTGATCGCTATTGGAAGAAAATTGAAGCATTTATTGGCTCAAAGACTGTTCTTCAGCTTCAACGGCACTAGTCTTTCTACAGGACAGTATCAGGATTCACCTATTTGTGTTTTGAAACTGGGGTATGTTTACCACCGTGACCAAACATCAGTACTCACTAATCAAAGTGGCAGTGCTCCAACATCGCCCTGGACTTTTGGGTCTATGCCGGTTGTCAAATCAGCAAATATGGGAAGAGGTAGTTTTATAGAACCGAAACTCTGTTTTCCCGAACTAAGGAATCCCTTAGATATGATGCAAAATGTCTCTGGTTCTCTAGTCGCGAAATCCAACACTTACATCACTCACAGCATACACCGCACGACTACCCGCGTTGCCGCTGCTGTTCCCCCACCGGCAAAATCGTCCTCTTCCCGCCGCCGCCGCAGCACACAGGAGTCGCTCCTCCTTATCTCTTATAGGGTGACCTTCCTGGCCGCAGAAACATGTTTGGTAGCCTGTTCAATTAGAAATGCATATCACACAAGGTGCCAAGGAATCTTTGGTCAAGAACATTTATCACGCGCCACACATTTATCAAGGTGCATGGGGGGCTGTTGCAACTACAATGACATTGCTGTCAATGATTGGGTATGTCGTCTATTAATGAATCCACTCCAAGGATGA

Protein sequence

MLFWKSFLLYSENAYLIAIGRKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWTFGSMPVVKSANMGRGSFIEPKLCFPELRNPLDMMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYRVTFLAAETCLVACSIRNAYHTRCQGIFGQEHLSRATHLSRCMGGCCNYNDIAVNDWVCRLLMNPLQG
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo07171Spo07171gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo07171.1Spo07171.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo07171.1.CDS.5Spo07171.1.CDS.5CDS
Spo07171.1.CDS.4Spo07171.1.CDS.4CDS
Spo07171.1.CDS.3Spo07171.1.CDS.3CDS
Spo07171.1.CDS.2Spo07171.1.CDS.2CDS
Spo07171.1.CDS.1Spo07171.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo07171.1.utr3p.2Spo07171.1.utr3p.2three_prime_UTR
Spo07171.1.utr3p.1Spo07171.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo07171.1.exon.6Spo07171.1.exon.6exon
Spo07171.1.exon.5Spo07171.1.exon.5exon
Spo07171.1.exon.4Spo07171.1.exon.4exon
Spo07171.1.exon.3Spo07171.1.exon.3exon
Spo07171.1.exon.2Spo07171.1.exon.2exon
Spo07171.1.exon.1Spo07171.1.exon.1exon


Homology
[Close]
BLAST of Spo07171.1 vs. NCBI nr
Match: gi|902213078|gb|KNA17170.1| (hypothetical protein SOVF_082470 [Spinacia oleracea])

HSP 1 Score: 107.1 bits (266), Expect = 4.400e-20
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

		  

Query: 113 MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR 170
           MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR
Sbjct: 1   MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR 57
[Close]
BLAST of Spo07171.1 vs. NCBI nr
Match: gi|902184000|gb|KNA10225.1| (hypothetical protein SOVF_146430 isoform B [Spinacia oleracea])

HSP 1 Score: 99.0 bits (245), Expect = 1.200e-17
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1 

		  

Query: 21  RKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWT 80
           RK  H   Q+     + TS STGQYQ+SP+C L+ GYVYH D +SVLTNQSGS  TSPWT
Sbjct: 31  RKAAHPYPQKASKIASTTSQSTGQYQESPVCALEPGYVYHHDPSSVLTNQSGSGSTSPWT 90

Query: 81  FGSMPVVKSANMGR 95
           FGSMPVV SANM R
Sbjct: 91  FGSMPVVNSANMRR 104
[Close]
BLAST of Spo07171.1 vs. NCBI nr
Match: gi|902183999|gb|KNA10224.1| (hypothetical protein SOVF_146430 isoform A [Spinacia oleracea])

HSP 1 Score: 99.0 bits (245), Expect = 1.200e-17
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1 

		  

Query: 21  RKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWT 80
           RK  H   Q+     + TS STGQYQ+SP+C L+ GYVYH D +SVLTNQSGS  TSPWT
Sbjct: 127 RKAAHPYPQKASKIASTTSQSTGQYQESPVCALEPGYVYHHDPSSVLTNQSGSGSTSPWT 186

Query: 81  FGSMPVVKSANMGR 95
           FGSMPVV SANM R
Sbjct: 187 FGSMPVVNSANMRR 200
[Close]
BLAST of Spo07171.1 vs. NCBI nr
Match: gi|902196615|gb|KNA13149.1| (hypothetical protein SOVF_119380 [Spinacia oleracea])

HSP 1 Score: 60.8 bits (146), Expect = 3.600e-6
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1 

		  

Query: 170 VTFLAAETCLVACSIRNAYHTRCQGIFGQEHLSRAT 206
           VTFLAAETCLVA SIRNAYHT+ +GIFG EHLS AT
Sbjct: 100 VTFLAAETCLVAGSIRNAYHTKYRGIFGGEHLSCAT 135
[Close]
BLAST of Spo07171.1 vs. NCBI nr
Match: gi|731311515|ref|XP_010669883.1| (PREDICTED: protein REVEILLE 6-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 59.7 bits (143), Expect = 8.000e-6
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1 

		  

Query: 56  GYVYHRDQTSVLTNQSGSAPTSPWTFGSMPVVKSANMGR 95
           G+VY+ D +SVLTNQSGS PTS WTFGSMP   S+NM R
Sbjct: 141 GHVYNHDPSSVLTNQSGSTPTSSWTFGSMPADNSSNMKR 179
[Close]
BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCH2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082470 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.000e-20
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1 

		  

Query: 113 MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR 170
           MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR
Sbjct: 1   MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR 57
[Close]
BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSK7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146430 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.300e-18
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1 

		  

Query: 21  RKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWT 80
           RK  H   Q+     + TS STGQYQ+SP+C L+ GYVYH D +SVLTNQSGS  TSPWT
Sbjct: 31  RKAAHPYPQKASKIASTTSQSTGQYQESPVCALEPGYVYHHDPSSVLTNQSGSGSTSPWT 90

Query: 81  FGSMPVVKSANMGR 95
           FGSMPVV SANM R
Sbjct: 91  FGSMPVVNSANMRR 104
[Close]
BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSI3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146430 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.300e-18
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1 

		  

Query: 21  RKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWT 80
           RK  H   Q+     + TS STGQYQ+SP+C L+ GYVYH D +SVLTNQSGS  TSPWT
Sbjct: 127 RKAAHPYPQKASKIASTTSQSTGQYQESPVCALEPGYVYHHDPSSVLTNQSGSGSTSPWT 186

Query: 81  FGSMPVVKSANMGR 95
           FGSMPVV SANM R
Sbjct: 187 FGSMPVVNSANMRR 200
[Close]
BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2J6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_119380 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.500e-6
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1 

		  

Query: 170 VTFLAAETCLVACSIRNAYHTRCQGIFGQEHLSRAT 206
           VTFLAAETCLVA SIRNAYHT+ +GIFG EHLS AT
Sbjct: 100 VTFLAAETCLVAGSIRNAYHTKYRGIFGGEHLSCAT 135
[Close]
BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D7S1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g004090 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.600e-6
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1 

		  

Query: 56  GYVYHRDQTSVLTNQSGSAPTSPWTFGSMPVVKSANMGR 95
           G+VY+ D +SVLTNQSGS PTS WTFGSMP   S+NM R
Sbjct: 141 GHVYNHDPSSVLTNQSGSTPTSSWTFGSMPADNSSNMKR 179
The following BLAST results are available for this feature:
BLAST of Spo07171.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902213078|gb|KNA17170.1|4.4e-20100.hypothetical protein SOVF_0824... [more]
gi|902184000|gb|KNA10225.1|1.2e-1764.8hypothetical protein SOVF_1464... [more]
gi|902183999|gb|KNA10224.1|1.2e-1764.8hypothetical protein SOVF_1464... [more]
gi|902196615|gb|KNA13149.1|3.6e-683.3hypothetical protein SOVF_1193... [more]
gi|731311515|ref|XP_010669883.1|8.0e-669.2PREDICTED: protein REVEILLE 6-... [more]
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BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RCH2_SPIOL3.0e-20100.Uncharacterized protein OS=Spi... [more]
A0A0K9QSK7_SPIOL8.3e-1864.8Uncharacterized protein OS=Spi... [more]
A0A0K9QSI3_SPIOL8.3e-1864.8Uncharacterized protein OS=Spi... [more]
A0A0K9R2J6_SPIOL2.5e-683.3Uncharacterized protein OS=Spi... [more]
A0A0J8D7S1_BETVU5.6e-669.2Uncharacterized protein OS=Bet... [more]
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BLAST of Spo07171.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo07171.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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