Spo07171.1 (mRNA) | SpinachBase

Overview


Name	Spo07171.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	Super_scaffold_183 : 77369 .. 88158 (-)
Sequence length	1112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGTTTTGGAAGTCTTTTCTTCTCTATTCAGAAAATGCATGTATGCGTTTGTTGAAGATTTTTTTCTAGATTTCTTCCTTCCTGGCTTTACAATTGATAAATTTAGTGCTCAAATATTTATAATGAAAGAATGAATGTGAGACGGTTCAACAAGAGTTAATATTTTTTTTGTTTGTAAATTACGAGTTGTGTATTCAGAATAAATTCTTTATCATAAGCATGCTATAGAGCTTTAAGTTTATAGAGTCAACATCCTTAACTGCATAATTCTCGTGGTATGTATAAGCGATGTTTACAGAATCAACAACGTTTTGCAGGTCATAACTCTTTATTTGTTGATTGTTTTTTGTATTTTATAGGCGATTATTGTGATGAAATGGTTGGTGCTATGTTGTGATTACTGTATGATTTTATTTATGGGAGGGGATAGGTCACGATTCCTTACGGATGCAACCATGTAATAGTCCTTAGGATCTTTATCAGCAGTAACAAGAACACCGATTTCTAATTTGTTGAATTTTTTCTATGCCTCAGATTTGATCGCTATTGGAAGAAAATTGAAGCATTTATTGGCTCAAAGACTGTTCTTCAGGTACAGATTTGAGATCTTATATTTTCAGATATTCCGATGATGGGTTTGGAACTTCTCCGAAATTATCGCCATGTGCTGTTGAACATCCATGATTAACCTTCTGGACTTGAGTTTTGGTTCACAATAAGGTGTTTTTACTTTAATGCATACGTGTGTACACAGATTGTGGGCTAGTTTAGTTTTAGTTTAATAATCGACCTACATGGTGGTGGTTATAGGTTTTTTTGTCCTCGAATCTAAGATATATATATGAGATTAAAGGAGCATCTGGCGACTTGCATTCCTTTGTATTTATTATGTTGTTTCCAACTGATGTTTAGTAACAACTTGTTAGATTTTGGGGTTGAAAAGCTATAAGCAATTACATTGTTGTTCATTGGAGCACCTTAGATTGTATTTTCTATGATGTTGGTGAGCCGGTATTACTCTAGCTAATGTGCTTAATCTAGGCCTTCTTTTTCTCTAATGTGAGCTGGTGGATCATATCACGAATTTATGACTTTGCAGATTCGTAGTCATACCCCCAAAAAGCATCTAAGATATGTTAGGATGCATCTTACTAGCATTTACTTCTTACTGGTGACCTTTGTTTGATAACTTGTAATTCACACACCTGTATTTTTTGTTTTGCAGCTTCAACGGCACTAGTCTTTCTACAGGACAGTATCAGGATTCACCTATTTGTGTTTTGAAACTGGGGTATGTTTACCACCGTGACCAAACATCAGTACTCACTAATCAAAGTGGCAGTGCTCCAACATCGCCCTGGACTTTTGGGTCTATGCCGGTTGTCAAATCAGCAAATATGGGAAGAGGTAGTTTTATAGAACCGAAACTCTGGTATAGGAAACAGAATATAGGGACTAGCTATTTAAGAACATGAGTATCTAGCTACACAAATTAAATGTGACTGGACTTCATTAAGAAATAGAAATAATGTAGTTAAGAATCGAGGATATATTTTTGATTTTGTAAAATATCGTAAAATGTTGGCCCGTGTTATGAAAAGTTGGGATTTTTGTTTGAAAGTTTACGTGAAATGAAACTGTATTCTGGTGAGTCTTCCCTGCAGATGATGCTACATTAGCAATGTCGATGACAATCATTGATTGCAACAGTAACAACAATGAGAGTAGAAGCACTTGGCCTACAGTTCTTACTATGGACCAGAAATACACTTAAAGGTTGGGATTTCTTATCATTTCATTCACAAGAGAAAAACATTCCAATGCAACCATACTTTACTTAGAGGTGAGAAAAGGCCTCCCCAACACCCTCTAAGCAACAATAACAAAACAGACAAGCAAAGAAAACTCAAACAAAACTAAACAATTACAGGATATGTTTCCATGTAAAAAACCAACTAATTTTGGTCCTAAAATATGATATTTTTTTCAGGCTAGTTAGGAGTAAATTTTGTTCTCAAAGTTTGAATTGAAGTTAAGTTGATGTAATTGTCTACAACCTTGAGTTAGTTAGAGGAAGCTTGTTTGGTCCAAAGTTTTGAATTAGTTCACTAATATTTGGAGGATTTATAGGTTTTCCTTAGGTTCGAATGAACAAAGAGTTTTAAGTGACCTTTGGCGGTCTACATTACATTAGTTCATACTAAGCATATGTTATAGTGACTCCTCAATGCGTCAACACTCATATAATTCCATCTGTACTAGAGATTATCCCACTGTCCTGGTATTATTTTTTATCATATAGTTAGATAATTCAAGTTGCCTGATTACTTGGTTTGATAGAGAATGAATGAAATTACAAGATCGAAGTGAAGCAACAATCAAATGCTCGTGTTGACTTCGTAACTTTGATTGATCATTTCTATTATGTTCCTTAATTTTTTTTTGAATGGTTTGAATGTTACCTGTTCAAAACACCATTATATACTTTCCTCATCTATCCAGATTTTCCCAAAGTTTTGCTCGTTCAGGCTTGTTTTCCCTAAGATGGGAAACTTGGTTACTTTTCTTTTTGATTATATGAATACACACTTTGGGTTTAGTTGCAAAAAACATAGAGAGAACCTTTTTCTATTTAGTGTAACTAATGCATCTTGATTTACATTTCATGTTGGAGCTGTGAGTCTGTGACCGTAGAATTGTATTTTAATAAGTTAACTCTCTTTTCTTTACAACATTCTTAGGAATTCCTAAAGATTACGTGATTATATCAAAAATCTGATGTACTGAAAGGAAATATTTTTATAATCACCTCATGTTTCCTGTTTTTTCCGTCTCTTTTTGGGGTTCAGAAATCTGCTTCTATATAATCTATTCACATGATAAAACAGTCTAGGATTTTCATATCTAATCACAGAGTTACTATTGTTGTGTGTGTGTTCTTGATATACATCTTCTAACTAAAGCTAGAAAAAGATCGGATAAGCCATTATATTTGAATTTGGAATCGGAATTTCGGATGTATCTTGTTTCAAATTACAAAACCAAAACCTATCACTTGGGCTAACTTCCCTCCCTATGTCTCTGCTAACTTTCTAAGTATATTAATTATAGTATATATTGACCATATGTTTCCTATGATCCCTTCTTTGGCTTGCCCTTGGCCTGGCTTCACTAAACAGTTTTGGGCCTTCTTGAGTAATTCAATTTTGTATTTTTCTGCTGGGGAAGCAATCAGTTGCATGCACGCATATATACACGTCCTCTACCACTAGCTCTAGCTAGATTAATTATGTGTTGAAGCTACTATAAGTTTTTAACAACAACAGCAATCATAAGATGATAAAAGAGGAGCCAATACATCCTTGAAGGAGCACTGAAAAAACCAGCCAAGTCTCCCCTCTCATTTCTTAATTTGTGTTTTACATTGATGAAACTTAAAATGTTTGGCTGGTTATGTTTGGTATGTACATCTGGTTGCATGGACTATATATGTTGGAGTTTATATTTTAGACACGTGTTTAAAAACACAGCATATTCATATCTAGAAATGCCATGTTATAGATGTTATGTTGCTGTTTCTTTTGCTGCATTGGTTGGTTGTCTAATTCCACCAAATAATCACCTGCCTATTGTTTAAGGTTAGCAGTTAAAACTGCTTCTAGACCTATGCTTGTCTATGCCAATTACCTATTCCTATGTGCTGACAGTTAACCTCCACTTGATTGTTGCTGGCCACTACATGTGCCTAGAACCTCTGCATTACTTTAAAAGTATCTGGTATTGTACTTCAGTTACTTTAGGGCCAAGCTTCCTCTCTTGTGTGTTCTAGGGAGCTTACCACAGTACCACCTTGCTTATACTTGATCAAATGAGGGGGATCTCTATCATATACAACTTTGAAGGGGGTACAAAGGGTGGAAGTATGGAACGTTGTATTGTACCAGTACTCTGCCCATGCTATCCAATTTGCCCAAGTCTTTGGCTTCCCTCCTATAAAACACCTAAGGTAGGATTCCACTCATTTGTTCACCACCTCAGTCTGTCCATCGTTGTACTTCTGTTGACACAGTTCTTTCTTGCCATATACTATACAGAATATGACACAGATTTAGGTAGGATAAAAACCAGATTCTTTCTTGCCATATTTTGTACAGAATATGACACAGATTTAGGTAGAATATTTTGTATACTGAAATATGATACCACATGTAGAATAATCTGTCACTTCTCATCTTTGTTTCCTGTTTTTCTGCGTTTATGAGCTTATTGATGCTAGTATACTTATATCATTTTGAAGCGCTGATTACATTTCTTATAATGGTACGAAGCATCCGCTAATGTTGTTTGCCTAAAGTTGTTTGCCTAAAATTGTTTTAAGGTTGTACAAACGAGGTTTCACTTTTTAAAAAAAAAATAGATTGCTTGTTTACCAAAACAAATTTGACATATTAGAGTTTCTTTGCAGATTAATGATGATTCAAGTGGTAATGGTGAAACGTAACACTTCTTTTTAATAGATTGTTTGTTTACCAAAATAAATTTGACATATTAATTTTTCTTTGCAGATTAAGGATGATTCAAGTGGTAATGGTGAAACGTAGATGAAGGGATCAACAAGTTATCTTCAAGCTAAGCTATAGTAGCGATAGGATTTACTCGCTTAATTAGTACTTAGTTAGGAAGATGTTTAGTTTTTTTACTATGTTGATTAGTGTAGAAAAATATGGTAGAACGTCGTTTTTGTTTCAAAATATTTCTTTTATTTCAGTTTGAGTCGACAATGCAAATTAATGAGTGAATAATTGTTAGCATTTTTTGTAAACTACATTGTCGTTAATTCGTATAAATTAGATGAGTTATGTTGTTTTATGATAATGTAGTACATTAATATTTAAAGTTTTATTTTTCATTATATATGATTTAATATATATTTTGGAGATATATGCAATCATGGTATTATTAATAACTATTTTATTATTATGCAAAGGAATGAAGAACAATGGTTTGAATTTGTGACACTTAGAAGGGTCTAAATTTGTTTGACGGAAAAATATTGTATCAAATTGTGACCCTCAGAAGGGTCTAGATTTGGGGGAACAAAAAACGTAAACACAAGAAATGACGGAGCAAAGGGTCGAAAGCTGCATCTGTGTTGCGCGAAAGTAGAGTAAATAGCAACCCCATAGAGAGTCGAAAAATTTCGACCAAATGAAGCGTCGAAATATGGCAACTAGTGACTACAAAAAGCGTCAAAAATCGAGCAATTAGCGAAGCTTTAAAGCGTTGGGATATATCGACCATGAACATTTCGACGCTTCAAAGAAGCGTTGAAATACAAAATTTCGGTGCTTTAAAGCGACGATATATGGCCAAAAAAGCGTCGAAAAGTGTCGTGTTTTTCCGTAGTGACCAATATTACATTCAAATTAATGGTACGCATACCATATTTTCTATCCTATTTGGGCCATACTAGTCACTTTCCATAACCTGCAAAACAGTACATTTACAATATACCATTCACCCATTCATTTATCAATGAATGACCCACATAGCAAGTTAGTAGAAACAAATCATGCATCACAGAAACATTTGCAGCAACTAATCAAAGGGTTCCAATAATCTATAAATCACTAGTAGAAAAATCGACATGTGCTTCCCTTCATGTGCGGCTCGTTTAGTAAATTGGCAGCACTTAAGAGGGAAAAATATATACATTTTTACAAGTGCGGGCTCATTTTAGAAAATTGGCAGCACTTGAGTCCAAGTGCGGGCATATTTGTAAAATGAGCCGCACAAAACATTTCTAAAAACGTTTCCCCATTTTTTTTTCATTTCCCGCTTATCCTCATTCCTCTTCTCTGGTTACTTCTCTTCCCTCTTCTCTCCTCCTTCTGTTCGACTCCTTCCCCGAATTGCATTACCTTAGTTTTCCCGAACTAAGGAATCCCTTAGATATGATGCAAAATGTCTCTGGTTCTCTAGTCGCGAAATCCAACACTTACATCACTCACAGCATACACCGCACGACTACCCGCGTTGCCGCTGCTGTTCCCCCACCGGCAAAATCGTCCTCTTCCCGCCGCCGCCGCAGCACACAGGAGTCGCTCCTCCTTATCTCTTATAGGTTTGTAGTTTAAATTTAATTATTTGTTCCTATAATCTTGTTAGTTTATTGACGAATGCCTAATTTTTCAATGTTTTTCGATTGTGTGCTCGTTTTGCTTCTACCTTCTCCCAGATCGAACTAATTCAGGTTTGTTCTTCGATTTTTTGTTTTCATTTTTTTTTTGACGATTCTTGTTTCTGATCTAATGCTTTGCATTGAGAAGTTCAATTCTAGTGTTTTTTGTGTAATTATTGTTAATTTCTCTTAGCTTTTGATTTTTTAGGGCTTTGTTTTTATTTTTTAACTTTTTTTATTGTTCGAATTGCGATTGTGTTCAATGGTGATGTATGATGGGTTTATATTGTTTGATTTTGGAATTTGTTGATGGTTTTGGATTTGAATTAGATTTTGTTAGCTGTACATGAACTAAAGGCTGGACTTGAATCAGCCAGAGTTGTTCCAAAACTTCTAGCTGAAAAATATTCAATGGATAGGTAATAAATTCAATCTGTAAATTTGAAAATCGACTAGCATCGGGGTGTTGCCGTCCAAGGAATAACTGAATAAGTTTGCTAATTACATCATTAAATGAGAAACTTTTTAGAAGTTGAGATCACTAGGCAGCTTGAGACCCACTCTCAAATCCCATACTGTTACCTATTATAAATGAAATTGTTAGTGAATTCTGGAATGTCAAGTCAGTCTTTGTTCAAAAAAAGTCAGTCCTATAAGCGATGATGTTTATTGCTATTAGTCGTCAATTGTAGTGATGATATTTTGATTTTATTGCTGTTAATCGTCAATTGCAAATGAATTAGAAAATATTTTTATGCAATTCGTTGTATTTTATTGCAATTTGTTGTACTTTATTGCTATTAGTCGTCCATTGTGGTGATGTTATTTTGATTTCTATGCTAATTGGTATCATGGTTGAGATGAAGCTTACATGAGATGCTTGCATAAATGCGAGCTTTAATTACACAATTATATGGGTGTGGAAGATGTTGTGGCTTAACTGAAATCTACTTCAGGTGCACATATGTCAAATTACTGGTAGTTTCAGTTGTTCTTTGTCCTGTAGTAACACTAGGCAGTAATTTCATCCTCACGTATCTTGCAGTAAGACTAGTTAGTAGTTCAACCTTATACTTTCTCCTGAAGTAAGAGTTGTAAGTAGTTTCAGCCTCTATTTGTCTTGCAGTCAGAGTAGCAGTAGTTTCAGCCGTGCTTCGTCCTACAGTCAGAGTAATCATTAGTTTCAGCGGCGCTTTTTTCCTACAGTATAAGTAGTAAGTAGTTTCAGTACAAGATGCAGTGTTGAATTTATAAACCATTATTTTTTAGTCATGTGACTTTTACGAATGATTATTTTGGTTTTGATGTTGAATTTTGTTTCTAAATGCTCATGTTGTTAAGGTTCCTTGCAAGAACGAAGAGCTTCAGGAACTTGTTGAGCATTTTAATGTCAGGAACTTGTAGAGCATTTTAATGTGCGTTTGGCCTTACACATGTTACTTATAGTTTTAAAAATCAAACTAGTTTTTCTAGATGGATCTCTCATCGAAATCAAACTAATTTATCCATTCAGTTCTACTCCTATGCATGCTTCCGCAGTCAAAATCCATTTGTGTGCTTGCTGTAAAAAGAAATGATCTTATCTTTAGCATTAGACCCTATTGACAATCTAGATTATCCGTGCCTGCATTTTATTTTATTTGTATAGTAGGTTGTTTTGTTAGTTCCTAGACGCCTCTCTGATTTGCTGCTTACGGTCTTCAAACTACAATGCAGGGTGACCTTCCTGGCCGCAGAAACATGTTTGGTAGCCTGTTCAATTAGAAATGCATATCACACAAGGTGCCAAGGAATCTTTGGTCAAGAACATTTATCACGCGCCACACATTTATCAAGGTGCATGGGGGGCTGTTGCAACTACAATGACATTGCTGTCAATGATTGGGTATGTCGTCTATTAATGAATCCACTCCAAGGATGACTCTGGTGCGACGTGGTTGGTGGAGACATCAAAATGAAGGTATCGGTAGACTTTAAGTTGAACACTTTAAGTTGGTTAGTCTGTATGGGTGCTTGTCTGTATGTGTATGCTTTCAATTTCAATGAATTTAGTACTAATTGGTGTTAATCTAGGGCTGTTGTAGTCTGTTCTACTGGGTTTATAATTTTGGTTTCGTCTGAGTTTTTGCTGAATTATGTTATGCTTTCTGTATTCTATTGTGGTCTGATCTATACATGGTCTCTTGTTGTTGCATGCCTTGGTAATTTTCTACTGTTGTTTTGTTGTCCCAGTCATGTCTTCATTTTACATGTTACGCATCTACTTTTTTCTTTTAGTTATTTTCATGTTTAGTATTTTAGTTTTTCCATTTTCTGATTTATGTGATTGTGCATCTGAAATTAATATCACGAGAAAAAAGTTTTTAAAGCGTTTTTAAAGCCTAAAATCAGTTTCTGGTCGTGTACATATTTCGTGTTTTTTATGTTGTTCTGATCTGCACATGTTATGAGTTTATGTACTGATGCGCTGCATTCTGAATTGATGCTTGCTGATCTACACTGATGCATAATGGTCTGCTTGGTCTGTTAATGGTCTGCTTGGTCTGTTAATATTCAGCTGACCAAATCTGCTTTCTACTGCTGACATAAGTTGACTTAGGTTTACTTTCTAGTGAATATAAGGCAACTTTGTTACAACTTAATAATGCAAGTGGGTTAGCTCAAAACATACTTTCGTGAAAGCAAACAAACACCTACATTGATCCAATAAACCTTCAATGTGTGTAACTAGCCATAACTAGGTGACATTGAGTTGAAAGTTGGGAGCAAAATGATCCATTTTAGTCAAAATATGACCAATAATGATCAAACGAGCCTTAAATGTGCATAACTTGACCAACTTAGGTGAGAATGAGTCTTAGAAATATAAAAATAAGTACATTAAACATGTAAAGGGTTTTAAATACTTATATAGCTTCATTAGTTGAAAGTTGGGAGCGAAATAAGCCATATTAGTCAATATATGACCTATAACGATCAAACGAGCCTTAAATATGCATAACTTGACCAAAGTAGGTGAGAATGAGTCTTAGAAACATAAAATAAGTATGTAAAACATGTAAAGAGTTTAAAATAATCATTAAGGTTCATTAGTTGAAATTTGGGACTGAAATAAGCCATTTTAGTCAAAATGTGACCTATAATGATCAAACGAGCCTTATATGTGTATAAGTTGACCAAATTAGGCTAGAGTGAGTCTTTGAAACTTTAAACTAAGTCTAATGAGCATGTAAAGGGTTTAAAAACTTATTTAAGTTCAGTAGTTGAAAGTTGGGTGCGAAATAAGCCATTTCACTCAGAATGCGACCTAACGATCAAACAAGCCTTATATGTGCATAGTTTGACCAAAGTAAGTGATAATGAGTCTTTGAAACATAAAAATAAGTTTATTAACCTTTTAAAGCATTAAATACTTATTTAAGTTCATTAATTGAAAGTTAGGAGCGAAATAAGCCATTTTAGTCAAAATATGAACTATATTGAACGAACGAGCCTTGAATGTTTATAACCAATGTGGGTGATTATGAATCTTTGAAAAACAAATGTAGGTTATTTAAAAATATGAAGGGTTTAAAATACTCATTTAGGTTCATTATTTGAATATTGGGACCGAAATAAGCCATTTTTGTCAAAATGTGACTTATAATGATCAAACGAGCCTTAAATGTGAATAACTTGATCAAAGTAGGTGAGAATGAGTCTTTGAAACATTAAACTAAGTCTAATGAACATGTAAAGGGTTTAAAATACTTATTGAAGTTCATTAGTTGAAAGTTGGGAGCGAAATAAGCCAATTTATTCGGAATGTGACCTATAACGATCAAACAAGCCTTATATGTGCATAACTTGACCAAAGTAGGTGGTAATGAGTTTTTGAAACATAAAACTAAGTATATTAAACATCTAAAGGGTTTAAAATACTTATTTAGGAAGTTGGAATCGAAATAAGCCATTTTAGTCAAGGTGGCCTATAATGATCAAACGGGCCTTAAATGTGGATAATTTGACCAAAGTAGGTGAGAATGAGTATTTGAAACATAAAACTAAGTATGTTAAACATGTACAAGGTTCAAATTACTCATTTAGGTTCATTAGTTGAAAGTTAGTACCGAAATAAACCATTTTTATTATTATACTGTTCATTATTTCATTGTTAGGAGCAAATTAAGTCTTGCTTTATTATATGATATAATATTTTAATATAACTAAAGTATATTTTTTTTTTGATGTTCGATTCTGTTAAGGTATTCAACAATCCGAGGGAGCAGCCTTTCACCACCATGGAGATAAATGAAGTTCGAGACAAGTTGAAAAACTTCATTACTAGTGATTATCTTTGATATTTTCTTGTAATGAATCATAGATTATGAATGCTAGTTTTTCATATGATTGTAATGTACTCGACTTTTAGATTCACAATTATACTATTTTATTTAATTATCTATATAATTGAATTTTTTTTATCTGATGTATGGAGGGTAACTAATGGCGTGGACCAGTTGTATAATACATGTAACAAGGAAATATAACAAATTTCTAGATCAGGTGCTGCTCATTTTTAGGCCAAGTGCGGCTCATTTATAAGCCAAGTGCGGCTCATTTTATG

mRNA sequence

ATGTTGTTTTGGAAGTCTTTTCTTCTCTATTCAGAAAATGCATATTTGATCGCTATTGGAAGAAAATTGAAGCATTTATTGGCTCAAAGACTGTTCTTCAGCTTCAACGGCACTAGTCTTTCTACAGGACAGTATCAGGATTCACCTATTTGTGTTTTGAAACTGGGGTATGTTTACCACCGTGACCAAACATCAGTACTCACTAATCAAAGTGGCAGTGCTCCAACATCGCCCTGGACTTTTGGGTCTATGCCGGTTGTCAAATCAGCAAATATGGGAAGAGGTAGTTTTATAGAACCGAAACTCTGTTTTCCCGAACTAAGGAATCCCTTAGATATGATGCAAAATGTCTCTGGTTCTCTAGTCGCGAAATCCAACACTTACATCACTCACAGCATACACCGCACGACTACCCGCGTTGCCGCTGCTGTTCCCCCACCGGCAAAATCGTCCTCTTCCCGCCGCCGCCGCAGCACACAGGAGTCGCTCCTCCTTATCTCTTATAGGGTGACCTTCCTGGCCGCAGAAACATGTTTGGTAGCCTGTTCAATTAGAAATGCATATCACACAAGGTGCCAAGGAATCTTTGGTCAAGAACATTTATCACGCGCCACACATTTATCAAGGTGCATGGGGGGCTGTTGCAACTACAATGACATTGCTGTCAATGATTGGGTATGTCGTCTATTAATGAATCCACTCCAAGGATGACTCTGGTGCGACGTGGTTGGTGGAGACATCAAAATGAAGGTATTCAACAATCCGAGGGAGCAGCCTTTCACCACCATGGAGATAAATGAAGTTCGAGACAAGTTGAAAAACTTCATTACTAGTGATTATCTTTGATATTTTCTTGTAATGAATCATAGATTATGAATGCTAGTTTTTCATATGATTGTAATGTACTCGACTTTTAGATTCACAATTATACTATTTTATTTAATTATCTATATAATTGAATTTTTTTTATCTGATGTATGGAGGGTAACTAATGGCGTGGACCAGTTGTATAATACATGTAACAAGGAAATATAACAAATTTCTAGATCAGGTGCTGCTCATTTTTAGGCCAAGTGCGGCTCATTTATAAGCCAAGTGCGGCTCATTTTATG

Coding sequence (CDS)

ATGTTGTTTTGGAAGTCTTTTCTTCTCTATTCAGAAAATGCATATTTGATCGCTATTGGAAGAAAATTGAAGCATTTATTGGCTCAAAGACTGTTCTTCAGCTTCAACGGCACTAGTCTTTCTACAGGACAGTATCAGGATTCACCTATTTGTGTTTTGAAACTGGGGTATGTTTACCACCGTGACCAAACATCAGTACTCACTAATCAAAGTGGCAGTGCTCCAACATCGCCCTGGACTTTTGGGTCTATGCCGGTTGTCAAATCAGCAAATATGGGAAGAGGTAGTTTTATAGAACCGAAACTCTGTTTTCCCGAACTAAGGAATCCCTTAGATATGATGCAAAATGTCTCTGGTTCTCTAGTCGCGAAATCCAACACTTACATCACTCACAGCATACACCGCACGACTACCCGCGTTGCCGCTGCTGTTCCCCCACCGGCAAAATCGTCCTCTTCCCGCCGCCGCCGCAGCACACAGGAGTCGCTCCTCCTTATCTCTTATAGGGTGACCTTCCTGGCCGCAGAAACATGTTTGGTAGCCTGTTCAATTAGAAATGCATATCACACAAGGTGCCAAGGAATCTTTGGTCAAGAACATTTATCACGCGCCACACATTTATCAAGGTGCATGGGGGGCTGTTGCAACTACAATGACATTGCTGTCAATGATTGGGTATGTCGTCTATTAATGAATCCACTCCAAGGATGA

Protein sequence

MLFWKSFLLYSENAYLIAIGRKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWTFGSMPVVKSANMGRGSFIEPKLCFPELRNPLDMMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYRVTFLAAETCLVACSIRNAYHTRCQGIFGQEHLSRATHLSRCMGGCCNYNDIAVNDWVCRLLMNPLQG

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo07171	Spo07171	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo07171.1	Spo07171.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07171.1.CDS.5	Spo07171.1.CDS.5	CDS
Spo07171.1.CDS.4	Spo07171.1.CDS.4	CDS
Spo07171.1.CDS.3	Spo07171.1.CDS.3	CDS
Spo07171.1.CDS.2	Spo07171.1.CDS.2	CDS
Spo07171.1.CDS.1	Spo07171.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07171.1.utr3p.2	Spo07171.1.utr3p.2	three_prime_UTR
Spo07171.1.utr3p.1	Spo07171.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07171.1.exon.6	Spo07171.1.exon.6	exon
Spo07171.1.exon.5	Spo07171.1.exon.5	exon
Spo07171.1.exon.4	Spo07171.1.exon.4	exon
Spo07171.1.exon.3	Spo07171.1.exon.3	exon
Spo07171.1.exon.2	Spo07171.1.exon.2	exon
Spo07171.1.exon.1	Spo07171.1.exon.1	exon

Homology

[Close]

BLAST of Spo07171.1 vs. NCBI nr
Match: gi|902213078|gb|KNA17170.1| (hypothetical protein SOVF_082470 [Spinacia oleracea])

HSP 1 Score: 107.1 bits (266), Expect = 4.400e-20
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1

		  
Query: 113 MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR 170
           MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR
Sbjct: 1   MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR 57

[Close]

BLAST of Spo07171.1 vs. NCBI nr
Match: gi|902184000|gb|KNA10225.1| (hypothetical protein SOVF_146430 isoform B [Spinacia oleracea])

HSP 1 Score: 99.0 bits (245), Expect = 1.200e-17
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1

		  
Query: 21  RKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWT 80
           RK  H   Q+     + TS STGQYQ+SP+C L+ GYVYH D +SVLTNQSGS  TSPWT
Sbjct: 31  RKAAHPYPQKASKIASTTSQSTGQYQESPVCALEPGYVYHHDPSSVLTNQSGSGSTSPWT 90

Query: 81  FGSMPVVKSANMGR 95
           FGSMPVV SANM R
Sbjct: 91  FGSMPVVNSANMRR 104

[Close]

BLAST of Spo07171.1 vs. NCBI nr
Match: gi|902183999|gb|KNA10224.1| (hypothetical protein SOVF_146430 isoform A [Spinacia oleracea])

HSP 1 Score: 99.0 bits (245), Expect = 1.200e-17
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1

		  
Query: 21  RKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWT 80
           RK  H   Q+     + TS STGQYQ+SP+C L+ GYVYH D +SVLTNQSGS  TSPWT
Sbjct: 127 RKAAHPYPQKASKIASTTSQSTGQYQESPVCALEPGYVYHHDPSSVLTNQSGSGSTSPWT 186

Query: 81  FGSMPVVKSANMGR 95
           FGSMPVV SANM R
Sbjct: 187 FGSMPVVNSANMRR 200

[Close]

BLAST of Spo07171.1 vs. NCBI nr
Match: gi|902196615|gb|KNA13149.1| (hypothetical protein SOVF_119380 [Spinacia oleracea])

HSP 1 Score: 60.8 bits (146), Expect = 3.600e-6
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1

		  
Query: 170 VTFLAAETCLVACSIRNAYHTRCQGIFGQEHLSRAT 206
           VTFLAAETCLVA SIRNAYHT+ +GIFG EHLS AT
Sbjct: 100 VTFLAAETCLVAGSIRNAYHTKYRGIFGGEHLSCAT 135

[Close]

BLAST of Spo07171.1 vs. NCBI nr
Match: gi|731311515|ref|XP_010669883.1| (PREDICTED: protein REVEILLE 6-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 59.7 bits (143), Expect = 8.000e-6
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1

		  
Query: 56  GYVYHRDQTSVLTNQSGSAPTSPWTFGSMPVVKSANMGR 95
           G+VY+ D +SVLTNQSGS PTS WTFGSMP   S+NM R
Sbjct: 141 GHVYNHDPSSVLTNQSGSTPTSSWTFGSMPADNSSNMKR 179

[Close]

BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RCH2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_082470 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 3.000e-20
Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 1

		  
Query: 113 MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR 170
           MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR
Sbjct: 1   MMQNVSGSLVAKSNTYITHSIHRTTTRVAAAVPPPAKSSSSRRRRSTQESLLLISYR 57

[Close]

BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSK7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146430 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.300e-18
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1

		  
Query: 21  RKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWT 80
           RK  H   Q+     + TS STGQYQ+SP+C L+ GYVYH D +SVLTNQSGS  TSPWT
Sbjct: 31  RKAAHPYPQKASKIASTTSQSTGQYQESPVCALEPGYVYHHDPSSVLTNQSGSGSTSPWT 90

Query: 81  FGSMPVVKSANMGR 95
           FGSMPVV SANM R
Sbjct: 91  FGSMPVVNSANMRR 104

[Close]

BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSI3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146430 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 8.300e-18
Identity = 48/74 (64.86%), Postives = 54/74 (72.97%), Query Frame = 1

		  
Query: 21  RKLKHLLAQRLFFSFNGTSLSTGQYQDSPICVLKLGYVYHRDQTSVLTNQSGSAPTSPWT 80
           RK  H   Q+     + TS STGQYQ+SP+C L+ GYVYH D +SVLTNQSGS  TSPWT
Sbjct: 127 RKAAHPYPQKASKIASTTSQSTGQYQESPVCALEPGYVYHHDPSSVLTNQSGSGSTSPWT 186

Query: 81  FGSMPVVKSANMGR 95
           FGSMPVV SANM R
Sbjct: 187 FGSMPVVNSANMRR 200

[Close]

BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2J6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_119380 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.500e-6
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 1

		  
Query: 170 VTFLAAETCLVACSIRNAYHTRCQGIFGQEHLSRAT 206
           VTFLAAETCLVA SIRNAYHT+ +GIFG EHLS AT
Sbjct: 100 VTFLAAETCLVAGSIRNAYHTKYRGIFGGEHLSCAT 135

[Close]

BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D7S1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g004090 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.600e-6
Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 1

		  
Query: 56  GYVYHRDQTSVLTNQSGSAPTSPWTFGSMPVVKSANMGR 95
           G+VY+ D +SVLTNQSGS PTS WTFGSMP   S+NM R
Sbjct: 141 GHVYNHDPSSVLTNQSGSTPTSSWTFGSMPADNSSNMKR 179

The following BLAST results are available for this feature:

BLAST of Spo07171.1 vs. NCBI nr
BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
BLAST of Spo07171.1 vs. ExPASy Swiss-Prot
BLAST of Spo07171.1 vs. TAIR (Arabidopsis)

BLAST of Spo07171.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902213078\|gb\|KNA17170.1\|	4.4e-20	100.	hypothetical protein SOVF_0824...	[more]
gi\|902184000\|gb\|KNA10225.1\|	1.2e-17	64.8	hypothetical protein SOVF_1464...	[more]
gi\|902183999\|gb\|KNA10224.1\|	1.2e-17	64.8	hypothetical protein SOVF_1464...	[more]
gi\|902196615\|gb\|KNA13149.1\|	3.6e-6	83.3	hypothetical protein SOVF_1193...	[more]
gi\|731311515\|ref\|XP_010669883.1\|	8.0e-6	69.2	PREDICTED: protein REVEILLE 6-...	[more]

BLAST of Spo07171.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RCH2_SPIOL	3.0e-20	100.	Uncharacterized protein OS=Spi...	[more]
A0A0K9QSK7_SPIOL	8.3e-18	64.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9QSI3_SPIOL	8.3e-18	64.8	Uncharacterized protein OS=Spi...	[more]
A0A0K9R2J6_SPIOL	2.5e-6	83.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8D7S1_BETVU	5.6e-6	69.2	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo07171.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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x 1


Match Name	E-value	Identity	Description

BLAST of Spo07171.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description