Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCTGGCATAACCTTCCTTATCATTCCATCCATGAATATTTTTTTTATTTTTTATTTTTTATTTTTTATTTTTATCTTTCCAATGAAATGAGGTTTTGGGCTAGTGGTTAAAACTGAACGTCTGTTAAAATTAAATCGAAAAAGTTTGAATATAAATATGCTATCATGCATACATTGTGTTTGTATCCAAGGTACTTAAAATCATTAAATCAGAGTGAGAAAACAAAAAAAAATGAATCCCTTTGGTGTGCCAATAAGCAATGAAACCTTGAAGGCAATGTCAAGGTATAAAGACAAAAGTATAACACAAGAAGATAGAGCAAGAGAAGCAATTAGGTTAATACACGCTGAAGACAAGAATTTGAGTGCACTTAAACATGCATTGAAGCTCAAGTCTGATTATGGGAATGGAGTTTCAACACTGTGTCTTCTTTACAACGCGACAGGTGACACCCTGGAGCTTGTCCAAGACCAGAAACAAGATTGGTTAGGTTATATTTATAAGGAGGAACCACCAAGTTCCTTTGAGAACGGCCAGTGGCTCGCTTTCCTCCATGCCCACCCTACATCTCAAGCTTATGGTTCAGAAGCTGCTAGGGTGTACCGTGGCAAGAATGTTAAGGGAGATGTTCGTGATTTCTTAGTTGCTTGGTCTACCCCATGGGGTTCCACCCAAAACTCTGTAAGTAAGATTACTTTTTTTTTTTATTATTTATTGTGCTGTAATTAATTAAAAAGACTGACTAACTGAGAGTAATTATAATTACAATTGAATTCATGTGAAATGCAGGCTTACACTGAGGTCCGTGAGAAAGATCACTTTCCACAATATTGGGATTACATCAAAGTGAGTAAGCTTGAAAATGCTAATAAAATAACAAAGGATGAGAGCGACGAATACTGTGCATCAACAGTGAGTATTGGCGGCATCACTTCGCCAGAATTTATTGCAGTACTCAAGCACAAATTTAGCCCATTGCCATGAACTTGGCTAATTAAGCTGCCTAACAGCATTAAGAATAATAAGTATATTTATCATTCGCCTGTTCGGTATTATGTCATCAATTTGCTTCTTTCCTTTATATGCTTTGTTTTGGTGAGTATAAGTGTTGAATAAAATATGGCTGAGACTTTCTCATCTTCTGTAGATTATAAGGCTATAGCTACAAATTATTGACAGATTTAATCTCATTGCTAATATGAAAATTAAAAGGCAGAATTTCCTATAACCTTCAAGGCTACTGCATAAGTCCCCTTGTACTCAATGAGATCGGTTCGAGCTTAAATGTGAGCAAAGAAAACAAGAAAAATCACTAGATTCACCATGTCAAAGAGGCGAAGGGGTTGAATTGGACTCCAATCCTAACTTATCATTCATCATTCTTCTTGACTTGATGAGTTCAAATCTAT ATCTGGCATAACCTTCCTTATCATTCCATCCATGAATATTTTTTTTATTTTTTATTTTTTATTTTTTATTTTTATCTTTCCAATGAAATGAGGTTTTGGGCTAGTGGTTAAAACTGAACGTCTGTTAAAATTAAATCGAAAAAGTTTGAATATAAATATGCTATCATGCATACATTGTGTTTGTATCCAAGGTACTTAAAATCATTAAATCAGAGTGAGAAAACAAAAAAAAATGAATCCCTTTGGTGTGCCAATAAGCAATGAAACCTTGAAGGCAATGTCAAGGTATAAAGACAAAAGTATAACACAAGAAGATAGAGCAAGAGAAGCAATTAGGTTAATACACGCTGAAGACAAGAATTTGAGTGCACTTAAACATGCATTGAAGCTCAAGTCTGATTATGGGAATGGAGTTTCAACACTGTGTCTTCTTTACAACGCGACAGGTGACACCCTGGAGCTTGTCCAAGACCAGAAACAAGATTGGTTAGGTTATATTTATAAGGAGGAACCACCAAGTTCCTTTGAGAACGGCCAGTGGCTCGCTTTCCTCCATGCCCACCCTACATCTCAAGCTTATGGTTCAGAAGCTGCTAGGGTGTACCGTGGCAAGAATGTTAAGGGAGATGTTCGTGATTTCTTAGTTGCTTGGTCTACCCCATGGGGTTCCACCCAAAACTCTGCTTACACTGAGGTCCGTGAGAAAGATCACTTTCCACAATATTGGGATTACATCAAAGTGAGTAAGCTTGAAAATGCTAATAAAATAACAAAGGATGAGAGCGACGAATACTGTGCATCAACAGTGAGTATTGGCGGCATCACTTCGCCAGAATTTATTGCAGTACTCAAGCACAAATTTAGCCCATTGCCATGAACTTGGCTAATTAAGCTGCCTAACAGCATTAAGAATAATAAGTATATTTATCATTCGCCTGTTCGGTATTATGTCATCAATTTGCTTCTTTCCTTTATATGCTTTGTTTTGGTGAGTATAAGTGTTGAATAAAATATGGCTGAGACTTTCTCATCTTCTGTAGATTATAAGGCTATAGCTACAAATTATTGACAGATTTAATCTCATTGCTAATATGAAAATTAAAAGGCAGAATTTCCTATAACCTTCAAGGCTACTGCATAAGTCCCCTTGTACTCAATGAGATCGGTTCGAGCTTAAATGTGAGCAAAGAAAACAAGAAAAATCACTAGATTCACCATGTCAAAGAGGCGAAGGGGTTGAATTGGACTCCAATCCTAACTTATCATTCATCATTCTTCTTGACTTGATGAGTTCAAATCTAT ATGAATCCCTTTGGTGTGCCAATAAGCAATGAAACCTTGAAGGCAATGTCAAGGTATAAAGACAAAAGTATAACACAAGAAGATAGAGCAAGAGAAGCAATTAGGTTAATACACGCTGAAGACAAGAATTTGAGTGCACTTAAACATGCATTGAAGCTCAAGTCTGATTATGGGAATGGAGTTTCAACACTGTGTCTTCTTTACAACGCGACAGGTGACACCCTGGAGCTTGTCCAAGACCAGAAACAAGATTGGTTAGGTTATATTTATAAGGAGGAACCACCAAGTTCCTTTGAGAACGGCCAGTGGCTCGCTTTCCTCCATGCCCACCCTACATCTCAAGCTTATGGTTCAGAAGCTGCTAGGGTGTACCGTGGCAAGAATGTTAAGGGAGATGTTCGTGATTTCTTAGTTGCTTGGTCTACCCCATGGGGTTCCACCCAAAACTCTGCTTACACTGAGGTCCGTGAGAAAGATCACTTTCCACAATATTGGGATTACATCAAAGTGAGTAAGCTTGAAAATGCTAATAAAATAACAAAGGATGAGAGCGACGAATACTGTGCATCAACAGTGAGTATTGGCGGCATCACTTCGCCAGAATTTATTGCAGTACTCAAGCACAAATTTAGCCCATTGCCATGA MNPFGVPISNETLKAMSRYKDKSITQEDRAREAIRLIHAEDKNLSALKHALKLKSDYGNGVSTLCLLYNATGDTLELVQDQKQDWLGYIYKEEPPSSFENGQWLAFLHAHPTSQAYGSEAARVYRGKNVKGDVRDFLVAWSTPWGSTQNSAYTEVREKDHFPQYWDYIKVSKLENANKITKDESDEYCASTVSIGGITSPEFIAVLKHKFSPLP Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo07283.1 vs. NCBI nr
Match: gi|902184229|gb|KNA10264.1| (hypothetical protein SOVF_146060 [Spinacia oleracea]) HSP 1 Score: 441.8 bits (1135), Expect = 6.800e-121 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Spo07283.1 vs. NCBI nr
Match: gi|1021038841|gb|KZM96622.1| (hypothetical protein DCAR_016016 [Daucus carota subsp. sativus]) HSP 1 Score: 330.1 bits (845), Expect = 2.900e-87 Identity = 156/215 (72.56%), Postives = 186/215 (86.51%), Query Frame = 1
BLAST of Spo07283.1 vs. NCBI nr
Match: gi|731350089|ref|XP_010686328.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 329.7 bits (844), Expect = 3.700e-87 Identity = 154/215 (71.63%), Postives = 187/215 (86.98%), Query Frame = 1
BLAST of Spo07283.1 vs. NCBI nr
Match: gi|1021038902|gb|KZM96683.1| (hypothetical protein DCAR_015955 [Daucus carota subsp. sativus]) HSP 1 Score: 328.2 bits (840), Expect = 1.100e-86 Identity = 157/215 (73.02%), Postives = 184/215 (85.58%), Query Frame = 1
BLAST of Spo07283.1 vs. NCBI nr
Match: gi|870852024|gb|KMT03984.1| (hypothetical protein BVRB_8g186900 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 318.5 bits (815), Expect = 8.600e-84 Identity = 149/196 (76.02%), Postives = 169/196 (86.22%), Query Frame = 1
BLAST of Spo07283.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QSM2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_146060 PE=4 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 4.700e-121 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 1
BLAST of Spo07283.1 vs. UniProtKB/TrEMBL
Match: A0A162A5W6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_016016 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 2.000e-87 Identity = 156/215 (72.56%), Postives = 186/215 (86.51%), Query Frame = 1
BLAST of Spo07283.1 vs. UniProtKB/TrEMBL
Match: A0A164ZZS9_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_015955 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 7.600e-87 Identity = 157/215 (73.02%), Postives = 184/215 (85.58%), Query Frame = 1
BLAST of Spo07283.1 vs. UniProtKB/TrEMBL
Match: A0A0D3GIY6_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.600e-84 Identity = 150/215 (69.77%), Postives = 180/215 (83.72%), Query Frame = 1
BLAST of Spo07283.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BVF7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g186900 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 6.000e-84 Identity = 149/196 (76.02%), Postives = 169/196 (86.22%), Query Frame = 1
BLAST of Spo07283.1 vs. ExPASy Swiss-Prot
Match: JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.800e-33 Identity = 85/195 (43.59%), Postives = 115/195 (58.97%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07283.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07283.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07283.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 1
BLAST of Spo07283.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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