Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTTACCCTACTTTTTCCTTATAAATTGACAATAACAATGTACCATTTTCAAACACAACTAAAGAAGTGGGAAGAACATCATCACAAAACAATAATGGGCTCTTCTAAATTTCTCCCATTTCTTCAACTAGTTTTGTGTTCTTTGTTACTAGGAATTTCAAATGGTCAGAGCATAGTACCAGTTGTGCCTGGACTTTCATACACATTTTATGATTCAAATTGCCCTGGTTTAGAAATTATTGTTAGAAGTCATCTTTGGGAAGTTTTTAACAATAATATTACTCAAGCGGCTGGCTTACTCCGCCTTCATTTCCACGATTGTTTTGTTCAGGTATATTCTTTTATTTTGTTTTGCACATGCAATAACTAAAGAGTTGAAAGGTATGCTCGTTTTCATGGAGAAGGTTTGTGTTTAGGAGATTATATTTTTGGAGTAGAGAGAGTCACAATTACATTTCTATGGACGAGATTCAATCTGAACTCGTGGGTATCGCAATTAACACTTTAATCAATTATTCTAGTTGAGAAGTATATACGAAGTATATTAAATTATTCTTTGTAGCACTTAAAATTTTATTACTTCATTCGTTCCATAAATATCGCATCATCTTGTTTTTTACATTATTCAAATTAGACATTTGGTTATCTTTTGTGATTTATACCTAAGAACATTTGTATAGTAGTTATGTAGGATCTTGCTAGATTCGTATATATATATTTTCTAAATATCAAATTTTTATAATTTTATATTTATATATAAATCGAGATATTAAGAGTCAAAGTATGTGTTGGAAAACATAAAACCAACCATGATTCGATATTTAAAGATCGGATAAATTATATATAAATTATCATTTACCAAATCCACATACCTCTCTATATTTAGTTGTATTTTATGCCAACAAAATCCTTAATAAATTATGATGATTTGAAATAATTAAGTAAATTTATTTTGATTGGACAAATATAATTTTGGTGAAAAACAACGTACACGAAAGAGTAGCCATATTAATTCGATATTACATAATTTGATTTGAATTTACCGGAGAACAAATAGTTGGTATGTGAATCGAGAGTAGTTGTTTTCCCACAGAGCATCAGTTGATATATACTCCTCCGTCCCTAAAAGATTGCCCTATATGTTGTAAATGGATGTCCATATTTGTTTACCTCATACCTAATTTTGTTTATGGTCGTCACGTGTTTCTTTTCACACACTATTATTTAATCTATATAAAATACAAATCTATCTATCAATTTGTTTTTGAGTATATCAATTTCTTAATAAAGTAAACAAAATGAGTTGGAGCAACTTTTTAGGAACGGAGAGAGAAGTCCATAACGTATAAAAGAAGCGGAAAACTATGCCTATTGCGAATAGTTAAAAATTAAGAAAAAAAAAATTGAAAAATCAATCGGATGGACAAAAATATTTGGTCGCGACAGACTATCAAGCAAGAGATTAGTTCTACTTGTAACTTTTATATGCGTTCGATCATAACGTGCATGTCGTTAGATTATTTTTACGGAGGTTTTTACGCACGCGCGAATTGAAAGTTGAAGATTCTATATCTATGTTATAGAAAAGAATAACTTTGTTTTTTGTTTGTTGATTTGTTTTTTCTTTAAAACATTATGGTATAGGGTTGTGACGGATCAGTTTTGCTGGATGGATCAACTAGCGGTCCAAGTGAGCAGGATGCACCTCCAAACTTGACCTTACGGGCTGCCGCATTTACAATTATAGACGATCTTCGTGCACTTGTGCATAATGCGTGTGGTCCAATTGTCTCTTGTGCTGATATCGTTGCTCTTGCAGCTCGTGAATCTGTTTTTCTGGTATACTTAAATCAACCTACATTACATATCCTAACATGCTTCATTTATATTATATATATTTTTTTTAAGCTATATATATTGGGTGATACTCTAACAACGTGACGAGGACCATAGGGTATACTTTAAATAGTTATGAGTGTAACACACTTGCAATTAATTAAAGAGGTTTAATTAGCGAGCTCCGTGTTATATACTATGCAAAACCAAAAAAAATCGAAGAGGATTTAAATTCAGAAATTACATTATAAAAAGTTATTTAAAAATTAGTTTTACGTACCAAAACAAGTAGTGAATCGGTTGTATTATCTCTGTTTAATTAATAAAGATTTTTACGATTATTATTTGCACAAATATTAAGTCAAATGTATAAAAGTTGGTTGAATATAGTAAAATATGAATAAAGTAAGAGAAATGTGTTAAAAGGTGGGTGAGTGTAAAAGAAATTAATAAATTAAAAGAAATTGAGTGAAAAGTTGTAAATGTTGTGGGCTAAGAAGGGTAAGAAATTAATTTTCAAGTCAAATAATAGAATAAAGCAAAGTGTAAAAAGTGTTATCAAACAGAATAAAACGGAAAGTGTAAATATCTTTCTAAAATAGAGGTAATACTTGTTACTCCCTTTGTATTTTAAAAAGAGATACAATTTTCTTAAGCGTTTGTATTTTTTTTTAAATTACACTTTCCATTTTGGCATGTTTTGATCACCACTTCCATTATACTAATATTTCTCTTTTTCTTGTGGTCCTCACACTTACTTACATCATCTTTTAACTATAATAAATAATTTACCCACTACTCCACTTTAATCTTATTTTAATAAATTCAACTCACTCTCCTAAACGTATGTGCCGATAAAAGTGTATTTCTTTTTAAATACAGAGGCAGTACTATATTAATTGTAACATTTATAAGTTAACATTCCTAAACATGACCTTGATCCATATATCCTAATTTGTCACACTTTCTTATGTAATTTTGGCAGCCAAATGGACCATATTATCAGATCCCATTAGGAAGAAGGGATAGTGTAAACTTTGCCACAAGACCGGTTACACTAGCCAATTTACCACCACCTACCTTTAACACCACAAGCCTCATCAACGCTTTTGCCGCAAAAAACTTGACTACGACCGATCTGGTGGCCCTCTCTGGCGGGCACACCATTGGACGCGGACACTGTGCCTCCTTCGCCAATAGACTCTACCCTACTCAAGACTCCACCTTGGACCAAACTTTCGCTAACAACCTTAAGCTGACTTGCCCAACAAATACCACTGATAACTCTACAAATTTGGACATTCGTTCACCTAACTTGTTCGATAACAAGTACTTTGTTGACCTTATGAACCGCCAAGGCTTGTTCACGTCCGATCAGGATTTGTACACCGACTCCAGGACGAGGAACATTGTAACAAGTTTTGCTGTCAATCAAAGCCTATTCTTTGAAAAATTTGTTGTTGGTATGTTAAAAATGGGACAACTTGGTGTATTGACGGGTACACAAGGGGAGATTCGAACAAATTGTTCTGCAACAAATGTTAACAACATCAACATAGACTTAGCGTCTGTGGTAAGAGACCATCAAGAACAAGAAATGTTGTCTCAGTATTAATTGAGGATAGATTATCGATCTGCATGCGCGTTTCAAGTCGAATAAATGTAACTTGCACTACTACTAATACGTAAGTTAATTACTTGTAGTTTTGAAATGATCGCACGGTTGAAAGAAGTTGTAATCTTTCTTTTACGTTATGTTTAGTGGGTCACTATTCCTGCTACTTCATTTTGAAAGGAAAAATTGACCGCATCAGTGTCAACTAGACAATTATTGCCAGCCTTGTTTTTTGCAATTCCACTTGCATGGACCCGGTCCACCATAAGATTACCATGGACCAGGGTAATTAGGTAATTTTAACAGTGAGTAAATTATAGAAACTGTAGGTTCTGTAAAGTAACTATATTTCCAGAATAATAACTATGAACATAATAATGATAAGAATAACTATTCTATCC TGCTTTACCCTACTTTTTCCTTATAAATTGACAATAACAATGTACCATTTTCAAACACAACTAAAGAAGTGGGAAGAACATCATCACAAAACAATAATGGGCTCTTCTAAATTTCTCCCATTTCTTCAACTAGTTTTGTGTTCTTTGTTACTAGGAATTTCAAATGGTCAGAGCATAGTACCAGTTGTGCCTGGACTTTCATACACATTTTATGATTCAAATTGCCCTGGTTTAGAAATTATTGTTAGAAGTCATCTTTGGGAAGTTTTTAACAATAATATTACTCAAGCGGCTGGCTTACTCCGCCTTCATTTCCACGATTGTTTTGTTCAGGGTTGTGACGGATCAGTTTTGCTGGATGGATCAACTAGCGGTCCAAGTGAGCAGGATGCACCTCCAAACTTGACCTTACGGGCTGCCGCATTTACAATTATAGACGATCTTCGTGCACTTGTGCATAATGCGTGTGGTCCAATTGTCTCTTGTGCTGATATCGTTGCTCTTGCAGCTCGTGAATCTGTTTTTCTGCCAAATGGACCATATTATCAGATCCCATTAGGAAGAAGGGATAGTGTAAACTTTGCCACAAGACCGGTTACACTAGCCAATTTACCACCACCTACCTTTAACACCACAAGCCTCATCAACGCTTTTGCCGCAAAAAACTTGACTACGACCGATCTGGTGGCCCTCTCTGGCGGGCACACCATTGGACGCGGACACTGTGCCTCCTTCGCCAATAGACTCTACCCTACTCAAGACTCCACCTTGGACCAAACTTTCGCTAACAACCTTAAGCTGACTTGCCCAACAAATACCACTGATAACTCTACAAATTTGGACATTCGTTCACCTAACTTGTTCGATAACAAGTACTTTGTTGACCTTATGAACCGCCAAGGCTTGTTCACGTCCGATCAGGATTTGTACACCGACTCCAGGACGAGGAACATTGTAACAAGTTTTGCTGTCAATCAAAGCCTATTCTTTGAAAAATTTGTTGTTGGTATGTTAAAAATGGGACAACTTGGTGTATTGACGGGTACACAAGGGGAGATTCGAACAAATTGTTCTGCAACAAATGTTAACAACATCAACATAGACTTAGCGTCTGTGGTAAGAGACCATCAAGAACAAGAAATGTTGTCTCAGTATTAATTGAGGATAGATTATCGATCTGCATGCGCGTTTCAAGTCGAATAAATGTAACTTGCACTACTACTAATACGTAAGTTAATTACTTGTAGTTTTGAAATGATCGCACGGTTGAAAGAAGTTGTAATCTTTCTTTTACGTTATGTTTAGTGGGTCACTATTCCTGCTACTTCATTTTGAAAGGAAAAATTGACCGCATCAGTGTCAACTAGACAATTATTGCCAGCCTTGTTTTTTGCAATTCCACTTGCATGGACCCGGTCCACCATAAGATTACCATGGACCAGGGTAATTAGGTAATTTTAACAGTGAGTAAATTATAGAAACTGTAGGTTCTGTAAAGTAACTATATTTCCAGAATAATAACTATGAACATAATAATGATAAGAATAACTATTCTATCC ATGTACCATTTTCAAACACAACTAAAGAAGTGGGAAGAACATCATCACAAAACAATAATGGGCTCTTCTAAATTTCTCCCATTTCTTCAACTAGTTTTGTGTTCTTTGTTACTAGGAATTTCAAATGGTCAGAGCATAGTACCAGTTGTGCCTGGACTTTCATACACATTTTATGATTCAAATTGCCCTGGTTTAGAAATTATTGTTAGAAGTCATCTTTGGGAAGTTTTTAACAATAATATTACTCAAGCGGCTGGCTTACTCCGCCTTCATTTCCACGATTGTTTTGTTCAGGGTTGTGACGGATCAGTTTTGCTGGATGGATCAACTAGCGGTCCAAGTGAGCAGGATGCACCTCCAAACTTGACCTTACGGGCTGCCGCATTTACAATTATAGACGATCTTCGTGCACTTGTGCATAATGCGTGTGGTCCAATTGTCTCTTGTGCTGATATCGTTGCTCTTGCAGCTCGTGAATCTGTTTTTCTGCCAAATGGACCATATTATCAGATCCCATTAGGAAGAAGGGATAGTGTAAACTTTGCCACAAGACCGGTTACACTAGCCAATTTACCACCACCTACCTTTAACACCACAAGCCTCATCAACGCTTTTGCCGCAAAAAACTTGACTACGACCGATCTGGTGGCCCTCTCTGGCGGGCACACCATTGGACGCGGACACTGTGCCTCCTTCGCCAATAGACTCTACCCTACTCAAGACTCCACCTTGGACCAAACTTTCGCTAACAACCTTAAGCTGACTTGCCCAACAAATACCACTGATAACTCTACAAATTTGGACATTCGTTCACCTAACTTGTTCGATAACAAGTACTTTGTTGACCTTATGAACCGCCAAGGCTTGTTCACGTCCGATCAGGATTTGTACACCGACTCCAGGACGAGGAACATTGTAACAAGTTTTGCTGTCAATCAAAGCCTATTCTTTGAAAAATTTGTTGTTGGTATGTTAAAAATGGGACAACTTGGTGTATTGACGGGTACACAAGGGGAGATTCGAACAAATTGTTCTGCAACAAATGTTAACAACATCAACATAGACTTAGCGTCTGTGGTAAGAGACCATCAAGAACAAGAAATGTTGTCTCAGTATTAA MYHFQTQLKKWEEHHHKTIMGSSKFLPFLQLVLCSLLLGISNGQSIVPVVPGLSYTFYDSNCPGLEIIVRSHLWEVFNNNITQAAGLLRLHFHDCFVQGCDGSVLLDGSTSGPSEQDAPPNLTLRAAAFTIIDDLRALVHNACGPIVSCADIVALAARESVFLPNGPYYQIPLGRRDSVNFATRPVTLANLPPPTFNTTSLINAFAAKNLTTTDLVALSGGHTIGRGHCASFANRLYPTQDSTLDQTFANNLKLTCPTNTTDNSTNLDIRSPNLFDNKYFVDLMNRQGLFTSDQDLYTDSRTRNIVTSFAVNQSLFFEKFVVGMLKMGQLGVLTGTQGEIRTNCSATNVNNINIDLASVVRDHQEQEMLSQY Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo07373.1 vs. NCBI nr
Match: gi|902168204|gb|KNA07473.1| (hypothetical protein SOVF_171340, partial [Spinacia oleracea]) HSP 1 Score: 677.9 bits (1748), Expect = 9.800e-192 Identity = 339/340 (99.71%), Postives = 339/340 (99.71%), Query Frame = 1
BLAST of Spo07373.1 vs. NCBI nr
Match: gi|731313637|ref|XP_010681212.1| (PREDICTED: peroxidase 12-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 582.0 bits (1499), Expect = 7.300e-163 Identity = 292/353 (82.72%), Postives = 315/353 (89.24%), Query Frame = 1
BLAST of Spo07373.1 vs. NCBI nr
Match: gi|902224379|gb|KNA19773.1| (hypothetical protein SOVF_058270 [Spinacia oleracea]) HSP 1 Score: 562.4 bits (1448), Expect = 6.000e-157 Identity = 289/351 (82.34%), Postives = 307/351 (87.46%), Query Frame = 1
BLAST of Spo07373.1 vs. NCBI nr
Match: gi|731313635|ref|XP_010681206.1| (PREDICTED: peroxidase 12-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 533.9 bits (1374), Expect = 2.300e-148 Identity = 264/353 (74.79%), Postives = 300/353 (84.99%), Query Frame = 1
BLAST of Spo07373.1 vs. NCBI nr
Match: gi|1781326|emb|CAA71490.1| (peroxidase [Spinacia oleracea]) HSP 1 Score: 515.4 bits (1326), Expect = 8.400e-143 Identity = 252/353 (71.39%), Postives = 298/353 (84.42%), Query Frame = 1
BLAST of Spo07373.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLA8_SPIOL (Peroxidase (Fragment) OS=Spinacia oleracea GN=SOVF_171340 PE=3 SV=1) HSP 1 Score: 677.9 bits (1748), Expect = 6.800e-192 Identity = 339/340 (99.71%), Postives = 339/340 (99.71%), Query Frame = 1
BLAST of Spo07373.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D1C0_BETVU (Peroxidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g012080 PE=3 SV=1) HSP 1 Score: 582.0 bits (1499), Expect = 5.100e-163 Identity = 292/353 (82.72%), Postives = 315/353 (89.24%), Query Frame = 1
BLAST of Spo07373.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJU8_SPIOL (Peroxidase OS=Spinacia oleracea GN=SOVF_058270 PE=3 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 4.200e-157 Identity = 289/351 (82.34%), Postives = 307/351 (87.46%), Query Frame = 1
BLAST of Spo07373.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FV92_BETVU (Peroxidase OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g012070 PE=3 SV=1) HSP 1 Score: 533.9 bits (1374), Expect = 1.600e-148 Identity = 264/353 (74.79%), Postives = 300/353 (84.99%), Query Frame = 1
BLAST of Spo07373.1 vs. UniProtKB/TrEMBL
Match: P93547_SPIOL (Peroxidase OS=Spinacia oleracea GN=prxr3 PE=2 SV=1) HSP 1 Score: 515.4 bits (1326), Expect = 5.800e-143 Identity = 252/353 (71.39%), Postives = 298/353 (84.42%), Query Frame = 1
BLAST of Spo07373.1 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 5.100e-108 Identity = 193/304 (63.49%), Postives = 233/304 (76.64%), Query Frame = 1
BLAST of Spo07373.1 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 OS=Sorghum bicolor GN=Sb03g046810 PE=1 SV=2) HSP 1 Score: 363.2 bits (931), Expect = 3.300e-99 Identity = 177/302 (58.61%), Postives = 224/302 (74.17%), Query Frame = 1
BLAST of Spo07373.1 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.100e-65 Identity = 142/326 (43.56%), Postives = 194/326 (59.51%), Query Frame = 1
BLAST of Spo07373.1 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=2) HSP 1 Score: 246.1 bits (627), Expect = 5.900e-64 Identity = 151/338 (44.67%), Postives = 201/338 (59.47%), Query Frame = 1
BLAST of Spo07373.1 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 7.700e-64 Identity = 133/318 (41.82%), Postives = 193/318 (60.69%), Query Frame = 1
BLAST of Spo07373.1 vs. TAIR (Arabidopsis)
Match: AT1G71695.1 (Peroxidase superfamily protein) HSP 1 Score: 392.5 bits (1007), Expect = 2.900e-109 Identity = 193/304 (63.49%), Postives = 233/304 (76.64%), Query Frame = 1
BLAST of Spo07373.1 vs. TAIR (Arabidopsis)
Match: AT5G06730.1 (Peroxidase superfamily protein) HSP 1 Score: 251.9 bits (642), Expect = 6.100e-67 Identity = 142/326 (43.56%), Postives = 194/326 (59.51%), Query Frame = 1
BLAST of Spo07373.1 vs. TAIR (Arabidopsis)
Match: AT5G06720.1 (peroxidase 2) HSP 1 Score: 245.7 bits (626), Expect = 4.400e-65 Identity = 138/326 (42.33%), Postives = 193/326 (59.20%), Query Frame = 1
BLAST of Spo07373.1 vs. TAIR (Arabidopsis)
Match: AT4G33420.1 (Peroxidase superfamily protein) HSP 1 Score: 244.6 bits (623), Expect = 9.700e-65 Identity = 135/297 (45.45%), Postives = 179/297 (60.27%), Query Frame = 1
BLAST of Spo07373.1 vs. TAIR (Arabidopsis)
Match: AT5G05340.1 (Peroxidase superfamily protein) HSP 1 Score: 237.7 bits (605), Expect = 1.200e-62 Identity = 135/332 (40.66%), Postives = 196/332 (59.04%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07373.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07373.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07373.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07373.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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