Spo07446.1 (mRNA) | SpinachBase

Overview


Name	Spo07446.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Location	SpoScf_01400 : 108656 .. 109312 (-)
Sequence length	657

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATCAAAAGACTGTGGCCACGACGACGACGATCGTAAAGATGCAGCCCGACGTGTAGTAGGTGGCATCTTAACCTTCATAGTCCTAGTCCTATTGGTGGTATTCATAATATGGCTTGTCCTTCGTCCAACAAAGCCCCGTTTTATACTCCAAGATGCAACCATCTACGCCTTCAATATAACAGCACCAAACCTTCTAACAGCCACCTTTCAAGTAACCCTTTCCTCCCGCAACCCAAACGAGCGCATCGGTGTCTACTACGAGCGCCTAGACGTGCACGCTTCATATCGGAATCAGCAGATCACACTTCCAACAAGGTTGCCATACACTTACCAAGGTCATAAAGATATAACCATATGGTCTCCTTTTCTATATGGTAACACAGTTCCAATTGCCCCTTACTTAGGGATGTCTCTACAACAAGATCAGAATGCTGGCTTGGTCAAGATGGATATTAAAATAAATGGTAGAGTTAAATGGAAAGTTGGTACTTGGGTTTCTGGCAAATATCATTTGAATGCAAATTGCCCTGCTTACATTTCATTTGCTAATAAAGGTAATACTAATATTAATAATAATAATCCCTTTAATCTTGGATCTGCTGCTCTTAAGTTTCAGCTTCCTAGTAGCTGTCAACTTGATGTTGCTGTTTAA

mRNA sequence

ATGACATCAAAAGACTGTGGCCACGACGACGACGATCGTAAAGATGCAGCCCGACGTGTAGTAGGTGGCATCTTAACCTTCATAGTCCTAGTCCTATTGGTGGTATTCATAATATGGCTTGTCCTTCGTCCAACAAAGCCCCGTTTTATACTCCAAGATGCAACCATCTACGCCTTCAATATAACAGCACCAAACCTTCTAACAGCCACCTTTCAAGTAACCCTTTCCTCCCGCAACCCAAACGAGCGCATCGGTGTCTACTACGAGCGCCTAGACGTGCACGCTTCATATCGGAATCAGCAGATCACACTTCCAACAAGGTTGCCATACACTTACCAAGGTCATAAAGATATAACCATATGGTCTCCTTTTCTATATGGTAACACAGTTCCAATTGCCCCTTACTTAGGGATGTCTCTACAACAAGATCAGAATGCTGGCTTGGTCAAGATGGATATTAAAATAAATGGTAGAGTTAAATGGAAAGTTGGTACTTGGGTTTCTGGCAAATATCATTTGAATGCAAATTGCCCTGCTTACATTTCATTTGCTAATAAAGGTAATACTAATATTAATAATAATAATCCCTTTAATCTTGGATCTGCTGCTCTTAAGTTTCAGCTTCCTAGTAGCTGTCAACTTGATGTTGCTGTTTAA

Coding sequence (CDS)

ATGACATCAAAAGACTGTGGCCACGACGACGACGATCGTAAAGATGCAGCCCGACGTGTAGTAGGTGGCATCTTAACCTTCATAGTCCTAGTCCTATTGGTGGTATTCATAATATGGCTTGTCCTTCGTCCAACAAAGCCCCGTTTTATACTCCAAGATGCAACCATCTACGCCTTCAATATAACAGCACCAAACCTTCTAACAGCCACCTTTCAAGTAACCCTTTCCTCCCGCAACCCAAACGAGCGCATCGGTGTCTACTACGAGCGCCTAGACGTGCACGCTTCATATCGGAATCAGCAGATCACACTTCCAACAAGGTTGCCATACACTTACCAAGGTCATAAAGATATAACCATATGGTCTCCTTTTCTATATGGTAACACAGTTCCAATTGCCCCTTACTTAGGGATGTCTCTACAACAAGATCAGAATGCTGGCTTGGTCAAGATGGATATTAAAATAAATGGTAGAGTTAAATGGAAAGTTGGTACTTGGGTTTCTGGCAAATATCATTTGAATGCAAATTGCCCTGCTTACATTTCATTTGCTAATAAAGGTAATACTAATATTAATAATAATAATCCCTTTAATCTTGGATCTGCTGCTCTTAAGTTTCAGCTTCCTAGTAGCTGTCAACTTGATGTTGCTGTTTAA

Protein sequence

MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFNITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITIWSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAYISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo07446	Spo07446	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo07446.1	Spo07446.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07446.1.CDS.1	Spo07446.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07446.1.exon.1	Spo07446.1.exon.1	exon

Homology

[Close]

BLAST of Spo07446.1 vs. NCBI nr
Match: gi|902237238|gb|KNA24719.1| (hypothetical protein SOVF_012580 [Spinacia oleracea])

HSP 1 Score: 443.7 bits (1140), Expect = 1.800e-121
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN
Sbjct: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI
Sbjct: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY
Sbjct: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV 219
           ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV
Sbjct: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV 218

[Close]

BLAST of Spo07446.1 vs. NCBI nr
Match: gi|731348298|ref|XP_010685425.1| (PREDICTED: protein YLS9-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 381.3 bits (978), Expect = 1.100e-102
Identity = 184/218 (84.40%), Postives = 199/218 (91.28%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           MTSKDCGHDDDDRKD  R ++GGILT IVLVLL +FIIWLVLRPTKPRFILQD TIYAFN
Sbjct: 1   MTSKDCGHDDDDRKDGFRCIIGGILTLIVLVLLAIFIIWLVLRPTKPRFILQDTTIYAFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           +TAPNLLTATFQVTLSSRNPN RIGVYYERLDV+ASY NQQITLPTRLP+TYQGHKDITI
Sbjct: 61  VTAPNLLTATFQVTLSSRNPNGRIGVYYERLDVYASYHNQQITLPTRLPFTYQGHKDITI 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPFLYGN+VPIAPYLGMSLQQDQNAGLV M+IKINGRVKWKVGTW+SGKYH NANCPAY
Sbjct: 121 WSPFLYGNSVPIAPYLGMSLQQDQNAGLVLMNIKINGRVKWKVGTWISGKYHFNANCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV 219
           I+F NKGN+  NN N FN G+AA+K Q  SSCQ+DVA+
Sbjct: 181 ITFGNKGNS--NNPNAFNFGAAAVKIQQSSSCQVDVAI 216

[Close]

BLAST of Spo07446.1 vs. NCBI nr
Match: gi|747085682|ref|XP_011090312.1| (PREDICTED: protein YLS9 [Sesamum indicum])

HSP 1 Score: 285.4 bits (729), Expect = 8.300e-74
Identity = 129/216 (59.72%), Postives = 172/216 (79.63%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           MT+KDCGH +DDR+   RR+    L F+V VL ++ ++WL+LRPTKP F+LQD T+YAFN
Sbjct: 1   MTAKDCGHHEDDRRKLYRRLFAAFLGFVVAVLFIILLVWLILRPTKPHFVLQDVTVYAFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           +T PN LT+ FQ+TLS+RNPN+RIG+YY++LDV+ASY +QQITL T+LP +YQGHKDIT+
Sbjct: 61  VTPPNFLTSNFQMTLSARNPNDRIGIYYDKLDVYASYHSQQITLATQLPTSYQGHKDITV 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPFLYGNTVP+APYL +SL QDQ AG V + I+++GR++WKVGT++SGKYHL  NCPAY
Sbjct: 121 WSPFLYGNTVPVAPYLAVSLNQDQMAGTVLVYIRVDGRIRWKVGTFISGKYHLYVNCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           I+F ++ N  +       +GS A+K+QL   C +DV
Sbjct: 181 INFGDRSNAVV-------VGS-AIKYQLIMDCHVDV 208

[Close]

BLAST of Spo07446.1 vs. NCBI nr
Match: gi|661889271|emb|CDP06858.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 281.2 bits (718), Expect = 1.600e-72
Identity = 130/216 (60.19%), Postives = 170/216 (78.70%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           M++KDCGH + +++   RR+   +L FI+L+L ++ ++WL+LRPTKP F+LQDAT+YAFN
Sbjct: 1   MSAKDCGHYEHEQRKLFRRLFVALLAFIILILFIILLVWLILRPTKPHFLLQDATVYAFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           ++APNLLT+ FQ+TLSSRNPN+RIG+ Y+RLD +ASYR QQITLPT LP TYQGHKDIT+
Sbjct: 61  VSAPNLLTSNFQITLSSRNPNDRIGISYDRLDAYASYRGQQITLPTLLPSTYQGHKDITV 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPFLYGN+VPIAPY   +L QDQ AG V ++IK+NGRV+WKVGT++SG+YHL  NCPAY
Sbjct: 121 WSPFLYGNSVPIAPYYTDALTQDQFAGTVLINIKVNGRVRWKVGTFISGRYHLYVNCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           I        N+ N N   +   A+K+QL  SC +DV
Sbjct: 181 I--------NLGNRNSGIMVGPAIKYQLVQSCHVDV 208

[Close]

BLAST of Spo07446.1 vs. NCBI nr
Match: gi|460391465|ref|XP_004241341.1| (PREDICTED: protein YLS9 [Solanum lycopersicum])

HSP 1 Score: 279.6 bits (714), Expect = 4.500e-72
Identity = 129/216 (59.72%), Postives = 174/216 (80.56%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           M++KDCGH D++R    RR+   ++ FI+L+L ++ +I+L+LRPTKP FILQDATIY+FN
Sbjct: 1   MSAKDCGHHDEERHKLHRRLFTALVGFIILILFIILLIFLILRPTKPHFILQDATIYSFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           I++PNLLT  FQ+TL+SRNPN++IG+YY+RLDV+A+YR QQITLPT +P TYQGHKD TI
Sbjct: 61  ISSPNLLTTNFQITLASRNPNDKIGIYYDRLDVYATYRGQQITLPTLVPQTYQGHKDFTI 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPF+YGN+VP+APYL  SL++DQ AG V +++K++GRV+WKVGT+VSGKYHLN NCPAY
Sbjct: 121 WSPFVYGNSVPVAPYLSESLREDQMAGTVLINVKVDGRVRWKVGTFVSGKYHLNVNCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           +     GN+         +GS A+K+QL  +C +DV
Sbjct: 181 VGGKMIGNS-------IAVGS-AMKYQLVQNCHVDV 208

[Close]

BLAST of Spo07446.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0L6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_012580 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.300e-121
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN
Sbjct: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI
Sbjct: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY
Sbjct: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV 219
           ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV
Sbjct: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV 218

[Close]

BLAST of Spo07446.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUY7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g170980 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.700e-103
Identity = 184/218 (84.40%), Postives = 199/218 (91.28%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           MTSKDCGHDDDDRKD  R ++GGILT IVLVLL +FIIWLVLRPTKPRFILQD TIYAFN
Sbjct: 1   MTSKDCGHDDDDRKDGFRCIIGGILTLIVLVLLAIFIIWLVLRPTKPRFILQDTTIYAFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           +TAPNLLTATFQVTLSSRNPN RIGVYYERLDV+ASY NQQITLPTRLP+TYQGHKDITI
Sbjct: 61  VTAPNLLTATFQVTLSSRNPNGRIGVYYERLDVYASYHNQQITLPTRLPFTYQGHKDITI 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPFLYGN+VPIAPYLGMSLQQDQNAGLV M+IKINGRVKWKVGTW+SGKYH NANCPAY
Sbjct: 121 WSPFLYGNSVPIAPYLGMSLQQDQNAGLVLMNIKINGRVKWKVGTWISGKYHFNANCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDVAV 219
           I+F NKGN+  NN N FN G+AA+K Q  SSCQ+DVA+
Sbjct: 181 ITFGNKGNS--NNPNAFNFGAAAVKIQQSSSCQVDVAI 216

[Close]

BLAST of Spo07446.1 vs. UniProtKB/TrEMBL
Match: A0A068UGU2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00023887001 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.100e-72
Identity = 130/216 (60.19%), Postives = 170/216 (78.70%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           M++KDCGH + +++   RR+   +L FI+L+L ++ ++WL+LRPTKP F+LQDAT+YAFN
Sbjct: 1   MSAKDCGHYEHEQRKLFRRLFVALLAFIILILFIILLVWLILRPTKPHFLLQDATVYAFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           ++APNLLT+ FQ+TLSSRNPN+RIG+ Y+RLD +ASYR QQITLPT LP TYQGHKDIT+
Sbjct: 61  VSAPNLLTSNFQITLSSRNPNDRIGISYDRLDAYASYRGQQITLPTLLPSTYQGHKDITV 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPFLYGN+VPIAPY   +L QDQ AG V ++IK+NGRV+WKVGT++SG+YHL  NCPAY
Sbjct: 121 WSPFLYGNSVPIAPYYTDALTQDQFAGTVLINIKVNGRVRWKVGTFISGRYHLYVNCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           I        N+ N N   +   A+K+QL  SC +DV
Sbjct: 181 I--------NLGNRNSGIMVGPAIKYQLVQSCHVDV 208

[Close]

BLAST of Spo07446.1 vs. UniProtKB/TrEMBL
Match: K4C9C2_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.200e-72
Identity = 129/216 (59.72%), Postives = 174/216 (80.56%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           M++KDCGH D++R    RR+   ++ FI+L+L ++ +I+L+LRPTKP FILQDATIY+FN
Sbjct: 1   MSAKDCGHHDEERHKLHRRLFTALVGFIILILFIILLIFLILRPTKPHFILQDATIYSFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           I++PNLLT  FQ+TL+SRNPN++IG+YY+RLDV+A+YR QQITLPT +P TYQGHKD TI
Sbjct: 61  ISSPNLLTTNFQITLASRNPNDKIGIYYDRLDVYATYRGQQITLPTLVPQTYQGHKDFTI 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPF+YGN+VP+APYL  SL++DQ AG V +++K++GRV+WKVGT+VSGKYHLN NCPAY
Sbjct: 121 WSPFVYGNSVPVAPYLSESLREDQMAGTVLINVKVDGRVRWKVGTFVSGKYHLNVNCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           +     GN+         +GS A+K+QL  +C +DV
Sbjct: 181 VGGKMIGNS-------IAVGS-AMKYQLVQNCHVDV 208

[Close]

BLAST of Spo07446.1 vs. UniProtKB/TrEMBL
Match: M1A5F5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400005898 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.400e-72
Identity = 129/216 (59.72%), Postives = 173/216 (80.09%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           M++KDCGH D++R    RR+   ++ FI+LVL ++ +I+L+LRPTKP FILQDATIY+FN
Sbjct: 1   MSAKDCGHHDEERHKLHRRLFAALVGFIILVLFIILLIFLILRPTKPHFILQDATIYSFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           I++PNLLT  FQ+TL+SRNPN++IG+YY++LDV+A+YR QQITLPT LP +YQGHKD TI
Sbjct: 61  ISSPNLLTTNFQITLASRNPNDKIGIYYDKLDVYATYRGQQITLPTLLPQSYQGHKDFTI 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPF+YGN+VP+APYL  SL +DQ AG V +++K++GRV+WKVGT+VSGKYHLN NCPAY
Sbjct: 121 WSPFVYGNSVPVAPYLSESLSEDQMAGTVLINVKVDGRVRWKVGTFVSGKYHLNVNCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           +     GN+         +GS A+K+QL  +C +DV
Sbjct: 181 VGGKMIGNS-------IAVGS-AMKYQLVQNCHVDV 208

[Close]

BLAST of Spo07446.1 vs. ExPASy Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.700e-63
Identity = 113/217 (52.07%), Postives = 162/217 (74.65%), Query Frame = 1


		  
Query: 1   MTSKDCG-HDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAF 60
           MT+KDCG H        A R+ G I+ FI++VL+ +F++W++L+PTKPRFILQDAT+YAF
Sbjct: 1   MTTKDCGNHGGGGGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAF 60

Query: 61  NITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDIT 120
           N++ PNLLT+ FQ+T++SRN N RIG+YY+RL V+A+YRNQQITL T +P TYQGHK+  
Sbjct: 61  NLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDN 120

Query: 121 IWSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPA 180
           +WSPF+YGN+VPIAP+  ++L  +QN G V + I+ +GRV+WKVGT ++GKYHL+  C A
Sbjct: 121 VWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQA 180

Query: 181 YISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           +I+ A+K           ++G  A+K+ L + C ++V
Sbjct: 181 FINLADKA-------AGVHVGENAVKYMLINKCSVNV 210

[Close]

BLAST of Spo07446.1 vs. ExPASy Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.400e-17
Identity = 50/143 (34.97%), Postives = 88/143 (61.54%), Query Frame = 1


		  
Query: 24  ILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFNITAP-NLLTATFQVTLSSRNPNE 83
           I++ IV++ +   I WL++RP   +F + DA++  F+ T+P N+L     +T+  RNPN+
Sbjct: 45  IISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPNK 104

Query: 84  RIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITIWSPFLYG-NTVPIAPYLGMSLQ 143
           RIG+YY+R++ HA Y  ++ +  T  P+ YQGHK+ T+ +P   G N V        +L 
Sbjct: 105 RIGLYYDRIEAHAYYEGKRFSTITLTPF-YQGHKNTTVLTPTFQGQNLVIFNAGQSRTLN 164

Query: 144 QDQNAGLVKMDIKINGRVKWKVG 165
            ++ +G+  ++IK   RV++K+G
Sbjct: 165 AERISGVYNIEIKFRLRVRFKLG 186

[Close]

BLAST of Spo07446.1 vs. ExPASy Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.700e-15
Identity = 46/155 (29.68%), Postives = 79/155 (50.97%), Query Frame = 1


		  
Query: 24  ILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFNITAPNLLTATFQVTLSSRNPNER 83
           ++T  VL+ +   IIWL+ RP   +F + DA +  F +   N L     +  + RNPN R
Sbjct: 52  LITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRR 111

Query: 84  IGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITIWSPFLYG-NTVPIAPYLGMSLQQ 143
           IGVYY+ ++V   Y +Q+  +   +   YQGHK+ T+    L G   V +       L +
Sbjct: 112 IGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNE 171

Query: 144 DQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANC 178
           D N+ + ++D K+  ++++K G   S ++     C
Sbjct: 172 DVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKC 206

[Close]

BLAST of Spo07446.1 vs. TAIR (Arabidopsis)
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 256.5 bits (654), Expect = 1.400e-68
Identity = 120/216 (55.56%), Postives = 157/216 (72.69%), Query Frame = 1


		  
Query: 1   MTSKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFN 60
           MT K+C H  D+ +   +R+   +L F+  VL VVF++W +L P  PRF+LQDATIYAFN
Sbjct: 1   MTEKECEHHHDEDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFN 60

Query: 61  ITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITI 120
           ++ PN LT+  QVTLSSRNPN++IG++Y+RLD++ASYRNQQ+TL T LP TYQGH D+TI
Sbjct: 61  VSQPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTI 120

Query: 121 WSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAY 180
           WSPFLYG TVP+APY   +L QD  AG+V ++IKI+G V+WKVGTWVSG+Y L+ NCPAY
Sbjct: 121 WSPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAY 180

Query: 181 ISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           I+ A            F+    A+K+QL   C +DV
Sbjct: 181 ITLAGH----------FSGDGPAVKYQLVQRCAVDV 206

[Close]

BLAST of Spo07446.1 vs. TAIR (Arabidopsis)
Match: AT3G11660.1 (NDR1/HIN1-like 1)

HSP 1 Score: 247.3 bits (630), Expect = 8.800e-66
Identity = 114/215 (53.02%), Postives = 160/215 (74.42%), Query Frame = 1


		  
Query: 4   KDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFNITA 63
           KDC +    R+   RR+   I+  + ++ L + +IW +L+P+KPRFILQDAT+YAFN++ 
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 64  --PNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITIW 123
             PNLLT+ FQ+TLSSRNPN +IG+YY+RLDV+A+YR+QQIT PT +P TYQGHKD+ IW
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 124 SPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAYI 183
           SPF+YG +VPIAP+ G+SL  D++ G+V + I+ +GRV+WKVGT+++GKYHL+  CPAYI
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 184 SFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           +F NK N  I       +G  A+K+   +SC + V
Sbjct: 182 NFGNKANGVI-------VGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of Spo07446.1 vs. TAIR (Arabidopsis)
Match: AT2G35960.1 (NDR1/HIN1-like 12)

HSP 1 Score: 243.8 bits (621), Expect = 9.700e-65
Identity = 113/217 (52.07%), Postives = 162/217 (74.65%), Query Frame = 1


		  
Query: 1   MTSKDCG-HDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAF 60
           MT+KDCG H        A R+ G I+ FI++VL+ +F++W++L+PTKPRFILQDAT+YAF
Sbjct: 1   MTTKDCGNHGGGGGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAF 60

Query: 61  NITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDIT 120
           N++ PNLLT+ FQ+T++SRN N RIG+YY+RL V+A+YRNQQITL T +P TYQGHK+  
Sbjct: 61  NLSQPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDN 120

Query: 121 IWSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPA 180
           +WSPF+YGN+VPIAP+  ++L  +QN G V + I+ +GRV+WKVGT ++GKYHL+  C A
Sbjct: 121 VWSPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQA 180

Query: 181 YISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           +I+ A+K           ++G  A+K+ L + C ++V
Sbjct: 181 FINLADKA-------AGVHVGENAVKYMLINKCSVNV 210

[Close]

BLAST of Spo07446.1 vs. TAIR (Arabidopsis)
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 236.9 bits (603), Expect = 1.200e-62
Identity = 105/214 (49.07%), Postives = 158/214 (73.83%), Query Frame = 1


		  
Query: 3   SKDCGHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATIYAFNIT 62
           SKDCG+    ++   R++   I+ FIV+VL+ +F++W++LRPTKPRF+LQDAT+YAFN++
Sbjct: 2   SKDCGNHGGGKEVVVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLS 61

Query: 63  APNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHKDITIWS 122
            PNLLT+ FQVT++SRNPN +IG+YY+RL V+A+Y NQQITL T +P TYQGHK++ +WS
Sbjct: 62  QPNLLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWS 121

Query: 123 PFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNANCPAYIS 182
           PF+YG  VPIAPY  ++L ++++ G V + I+ +G V+WKV T ++GKYH++  C A+I+
Sbjct: 122 PFVYGTAVPIAPYNSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFIN 181

Query: 183 FANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
             NK    +       +G  A+K+ L + C ++V
Sbjct: 182 LGNKAAGVL-------VGDNAVKYTLANKCSVNV 208

[Close]

BLAST of Spo07446.1 vs. TAIR (Arabidopsis)
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 218.4 bits (555), Expect = 4.400e-57
Identity = 105/220 (47.73%), Postives = 149/220 (67.73%), Query Frame = 1


		  
Query: 1   MTSKDC----GHDDDDRKDAARRVVGGILTFIVLVLLVVFIIWLVLRPTKPRFILQDATI 60
           MT + C    G+++   +   RR+    L  IV V  VVF++W +L P  PRF+LQD TI
Sbjct: 1   MTGRYCDQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTI 60

Query: 61  YAFNITAPNLLTATFQVTLSSRNPNERIGVYYERLDVHASYRNQQITLPTRLPYTYQGHK 120
             FN++ PN L++  QVT+SSRNPN++IG++Y+RLD++ +YRNQ++TL   LP TYQGH 
Sbjct: 61  NDFNVSQPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHL 120

Query: 121 DITIWSPFLYGNTVPIAPYLGMSLQQDQNAGLVKMDIKINGRVKWKVGTWVSGKYHLNAN 180
           ++T+WSPFL G+ VP+APYL  +L +D  AGLV ++IKI+G V+WKVG+WVSG Y L+ N
Sbjct: 121 EVTVWSPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVN 180

Query: 181 CPAYISFANKGNTNINNNNPFNLGSAALKFQLPSSCQLDV 217
           CPA+I+   K    +    P      A+K+QL   C +DV
Sbjct: 181 CPAFITVTGK----LTGTGP------AIKYQLVQRCAVDV 210

The following BLAST results are available for this feature:

BLAST of Spo07446.1 vs. NCBI nr
BLAST of Spo07446.1 vs. UniProtKB/TrEMBL
BLAST of Spo07446.1 vs. ExPASy Swiss-Prot
BLAST of Spo07446.1 vs. TAIR (Arabidopsis)

BLAST of Spo07446.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902237238\|gb\|KNA24719.1\|	1.8e-121	100.	hypothetical protein SOVF_0125...	[more]
gi\|731348298\|ref\|XP_010685425.1\|	1.1e-102	84.4	PREDICTED: protein YLS9-like [...	[more]
gi\|747085682\|ref\|XP_011090312.1\|	8.3e-74	59.7	PREDICTED: protein YLS9 [Sesam...	[more]
gi\|661889271\|emb\|CDP06858.1\|	1.6e-72	60.1	unnamed protein product [Coffe...	[more]
gi\|460391465\|ref\|XP_004241341.1\|	4.5e-72	59.7	PREDICTED: protein YLS9 [Solan...	[more]

BLAST of Spo07446.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9S0L6_SPIOL	1.3e-121	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BUY7_BETVU	7.7e-103	84.4	Uncharacterized protein OS=Bet...	[more]
A0A068UGU2_COFCA	1.1e-72	60.1	Uncharacterized protein OS=Cof...	[more]
K4C9C2_SOLLC	3.2e-72	59.7	Uncharacterized protein OS=Sol...	[more]
M1A5F5_SOLTU	5.4e-72	59.7	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo07446.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3


Match Name	E-value	Identity	Description
NHL12_ARATH	1.7e-63	52.0	NDR1/HIN1-like protein 12 OS=A...	[more]
YLS9_ARATH	1.4e-17	34.9	Protein YLS9 OS=Arabidopsis th...	[more]
NHL3_ARATH	8.7e-15	29.6	NDR1/HIN1-Like protein 3 OS=Ar...	[more]

BLAST of Spo07446.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT3G44220.1	1.4e-68	55.5	Late embryogenesis abundant (L...	[more]
AT3G11660.1	8.8e-66	53.0	NDR1/HIN1-like 1	[more]
AT2G35960.1	9.7e-65	52.0	NDR1/HIN1-like 12	[more]
AT3G52470.1	1.2e-62	49.0	Late embryogenesis abundant (L...	[more]
AT5G22200.1	4.4e-57	47.7	Late embryogenesis abundant (L...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 74..177 score: 8.7
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 1..216 score: 1.3E
None	No IPR available	PANTHER	PTHR31415:SF2	LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED	coord: 1..216 score: 1.3E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm