Spo07501.1 (mRNA) | SpinachBase

Overview


Name	Spo07501.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Chlorophyll a-b binding protein 3, chloroplastic
Location	chr5 : 62615153 .. 62616570 (-)
Sequence length	825

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAACACAAGCTTTGGTTTCATCTTCCTTGACTTCATCAGTCGAAACTGCAAGACAGATTCTTGGTGCTAGGTCTGGACTTGCTCCTTCTTCTTTAAGGAAGAACTCGTTCGTCGTTAGAGCTGCCTCTACTCCACCTGTTAAGGTACGTTCAGTATTACTGCCAGTTTTTTTTTTCTAGTTTCGAGATTTTTCACAAGTTGTATGTATGATATTATTTGTGTAATAAACCGATCATGTCTTTACAACACTTAAAATTGCGCGATGTCTTGAACAATTGTACATAACCTGCTACTTCATTGAACAGTGTCTTGTTTATGCAGTATTGTTCTTGTTACAACTTATTCAGAAAGTTAAAGGAAAACATAATCTAATGATTTAGTCCCATTCAATTCATTGTTAATTAACTACTTTTAAAATTTGTTTTTTTTTTTTGGGTGAAAACTCTTAAAATTTGTTGTAGATGAGTAAACCTTAAATTGGATATATATAATTAGGAAAATTAAGAAGAAAAAACAGTAGAGAACCTGGAGATTCAGATTATGAATTTTTCAACATGATTTTTTTCGTTTTTTAATTTTATTTTTAACACGAACAAGTATAATTTTGATTAAATTTTTCTTGATATGGGATTTGTTAACAGCAAAATGCAAACAGACCCCTTTGGTTTGCATCAAAGCAGAGCCTTTCATACTTGGATGGCAGGTAATATTTGTTTTTGTAAATTATGATGTTGTGCAAAATGTCTCATCTTATTAGTTTCTTAGCAATGATATAATATATTGCTTCAAACTATGCAGTCTTCCAGGTGACTTTGGGTTCGACCCACTTGGACTCTCAGACCCAGAAGGCACCGGTGGGTTCATTGAACCAAGGTGGCTAGCCTATGGTGAGATCATCAACGGCCGATATGCTATGCTTGGAGCAGTTGGTGCTATCGCCCCAGAAATCCTTGGAAAGGCCGGTTTGATCCCACAAGAAACCGCCCTCCCGTGGTTCCAAACGGGAGTGATCCCACCGGCAGGCACCTACAACTACTGGGCTGACCCATTTACATTGTTCGTCTTTGAGATGGCACTTATGGGCTTTGCCGAGCACCGGAGATTACAGGACTGGTACAACCCCGGGTCCATGGGCAAGCAATACTTTTTGGGTCTAGAGAAGGGCTTTGCTGGATCCGGTGAGCCCGCATACCCAGGTGGACCAATCTTCAACCCATTGGGCTTTGGAAAGGACGAGAAGTCACTCAAGGAACTTAAGCTGAAGGAGGTGAAGAACGGAAGGCTGGCAATGTTGGCGATATTGGGTTACTTTATACAGGGTCTGGTTACTGGTGTTGGCCCATACCAAAACCTTCTTGACCACTTGGCTGACCCAGTCAACAACAACATCTTGACTAGTCTCAAGTTCCACTAA

mRNA sequence

ATGGCAACACAAGCTTTGGTTTCATCTTCCTTGACTTCATCAGTCGAAACTGCAAGACAGATTCTTGGTGCTAGGTCTGGACTTGCTCCTTCTTCTTTAAGGAAGAACTCGTTCGTCGTTAGAGCTGCCTCTACTCCACCTGTTAAGCAAAATGCAAACAGACCCCTTTGGTTTGCATCAAAGCAGAGCCTTTCATACTTGGATGGCAGTCTTCCAGGTGACTTTGGGTTCGACCCACTTGGACTCTCAGACCCAGAAGGCACCGGTGGGTTCATTGAACCAAGGTGGCTAGCCTATGGTGAGATCATCAACGGCCGATATGCTATGCTTGGAGCAGTTGGTGCTATCGCCCCAGAAATCCTTGGAAAGGCCGGTTTGATCCCACAAGAAACCGCCCTCCCGTGGTTCCAAACGGGAGTGATCCCACCGGCAGGCACCTACAACTACTGGGCTGACCCATTTACATTGTTCGTCTTTGAGATGGCACTTATGGGCTTTGCCGAGCACCGGAGATTACAGGACTGGTACAACCCCGGGTCCATGGGCAAGCAATACTTTTTGGGTCTAGAGAAGGGCTTTGCTGGATCCGGTGAGCCCGCATACCCAGGTGGACCAATCTTCAACCCATTGGGCTTTGGAAAGGACGAGAAGTCACTCAAGGAACTTAAGCTGAAGGAGGTGAAGAACGGAAGGCTGGCAATGTTGGCGATATTGGGTTACTTTATACAGGGTCTGGTTACTGGTGTTGGCCCATACCAAAACCTTCTTGACCACTTGGCTGACCCAGTCAACAACAACATCTTGACTAGTCTCAAGTTCCACTAA

Coding sequence (CDS)

ATGGCAACACAAGCTTTGGTTTCATCTTCCTTGACTTCATCAGTCGAAACTGCAAGACAGATTCTTGGTGCTAGGTCTGGACTTGCTCCTTCTTCTTTAAGGAAGAACTCGTTCGTCGTTAGAGCTGCCTCTACTCCACCTGTTAAGCAAAATGCAAACAGACCCCTTTGGTTTGCATCAAAGCAGAGCCTTTCATACTTGGATGGCAGTCTTCCAGGTGACTTTGGGTTCGACCCACTTGGACTCTCAGACCCAGAAGGCACCGGTGGGTTCATTGAACCAAGGTGGCTAGCCTATGGTGAGATCATCAACGGCCGATATGCTATGCTTGGAGCAGTTGGTGCTATCGCCCCAGAAATCCTTGGAAAGGCCGGTTTGATCCCACAAGAAACCGCCCTCCCGTGGTTCCAAACGGGAGTGATCCCACCGGCAGGCACCTACAACTACTGGGCTGACCCATTTACATTGTTCGTCTTTGAGATGGCACTTATGGGCTTTGCCGAGCACCGGAGATTACAGGACTGGTACAACCCCGGGTCCATGGGCAAGCAATACTTTTTGGGTCTAGAGAAGGGCTTTGCTGGATCCGGTGAGCCCGCATACCCAGGTGGACCAATCTTCAACCCATTGGGCTTTGGAAAGGACGAGAAGTCACTCAAGGAACTTAAGCTGAAGGAGGTGAAGAACGGAAGGCTGGCAATGTTGGCGATATTGGGTTACTTTATACAGGGTCTGGTTACTGGTGTTGGCCCATACCAAAACCTTCTTGACCACTTGGCTGACCCAGTCAACAACAACATCTTGACTAGTCTCAAGTTCCACTAA

Protein sequence

MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo07501	Spo07501	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo07501.1	Spo07501.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07501.1.CDS.3	Spo07501.1.CDS.3	CDS
Spo07501.1.CDS.2	Spo07501.1.CDS.2	CDS
Spo07501.1.CDS.1	Spo07501.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07501.1.exon.3	Spo07501.1.exon.3	exon
Spo07501.1.exon.2	Spo07501.1.exon.2	exon
Spo07501.1.exon.1	Spo07501.1.exon.1	exon

Homology

[Close]

BLAST of Spo07501.1 vs. NCBI nr
Match: gi|902194805|gb|KNA12667.1| (hypothetical protein SOVF_123890 [Spinacia oleracea])

HSP 1 Score: 556.6 bits (1433), Expect = 2.400e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS
Sbjct: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
           KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI
Sbjct: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 274

[Close]

BLAST of Spo07501.1 vs. NCBI nr
Match: gi|731361771|ref|XP_010692543.1| (PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 533.1 bits (1372), Expect = 2.900e-148
Identity = 260/274 (94.89%), Postives = 270/274 (98.54%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MATQALVSSSLTSSVETARQILGARSG++PSS +KNSFVVRA++TPPVKQ ANRPLWFAS
Sbjct: 1   MATQALVSSSLTSSVETARQILGARSGVSPSS-KKNSFVVRASATPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
           KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP ETALPWFQTGVIPPAGTYNYWADP+TLFVFEMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPAETALPWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSG+PAYPGGPIFNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           FIQGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of Spo07501.1 vs. NCBI nr
Match: gi|923506939|ref|XP_013717384.1| (PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like [Brassica napus])

HSP 1 Score: 505.8 bits (1301), Expect = 4.900e-140
Identity = 244/274 (89.05%), Postives = 259/274 (94.53%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MA QALVSSSLTSSV+TARQI G +  +   S+RK SFVV+AASTPPVKQ ANRPLWFAS
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGTKPAV---SVRKTSFVVKAASTPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
            QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP +TALPWFQTGVIPPAGTY+YWADP+TLFV EMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPADTALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSG+P+YPGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGDPSYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           F+QGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271

[Close]

BLAST of Spo07501.1 vs. NCBI nr
Match: gi|922476168|ref|XP_013636657.1| (PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Brassica oleracea var. oleracea])

HSP 1 Score: 505.4 bits (1300), Expect = 6.400e-140
Identity = 245/274 (89.42%), Postives = 259/274 (94.53%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MA QALVSSSLTSSV+TARQI G++  +   S+RK SFVV+AASTPPVKQ ANR LWFAS
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGSKPAV---SVRKTSFVVKAASTPPVKQGANRQLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
            QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP +TALPWFQTGVIPPAGTY+YWADP+TLFV EMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPADTALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSG+PAYPGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGDPAYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           F+QGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271

[Close]

BLAST of Spo07501.1 vs. NCBI nr
Match: gi|922569458|ref|XP_013613045.1| (PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like [Brassica oleracea var. oleracea])

HSP 1 Score: 505.4 bits (1300), Expect = 6.400e-140
Identity = 243/274 (88.69%), Postives = 259/274 (94.53%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MA QALVSSSLTSSV+TARQI G +  +   S+RK SFV++AASTPPVKQ ANRPLWFAS
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGTKPAV---SVRKTSFVIKAASTPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
            QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP +TALPWFQTGVIPPAGTY+YWADP+TLFV EMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPADTALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSG+P+YPGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGDPSYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           F+QGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271

[Close]

BLAST of Spo07501.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R1K7_SPIOL (Chlorophyll a-b binding protein, chloroplastic OS=Spinacia oleracea GN=SOVF_123890 PE=3 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 1.700e-155
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS
Sbjct: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
           KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI
Sbjct: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 274

[Close]

BLAST of Spo07501.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIC2_BETVU (Chlorophyll a-b binding protein, chloroplastic OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g021010 PE=3 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 2.000e-148
Identity = 260/274 (94.89%), Postives = 270/274 (98.54%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MATQALVSSSLTSSVETARQILGARSG++PSS +KNSFVVRA++TPPVKQ ANRPLWFAS
Sbjct: 1   MATQALVSSSLTSSVETARQILGARSGVSPSS-KKNSFVVRASATPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
           KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP ETALPWFQTGVIPPAGTYNYWADP+TLFVFEMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPAETALPWFQTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSG+PAYPGGPIFNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           FIQGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of Spo07501.1 vs. UniProtKB/TrEMBL
Match: A0A078FL44_BRANA (Chlorophyll a-b binding protein, chloroplastic OS=Brassica napus GN=BnaA09g13710D PE=3 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 3.400e-140
Identity = 244/274 (89.05%), Postives = 259/274 (94.53%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MA QALVSSSLTSSV+TARQI G +  +   S+RK SFVV+AASTPPVKQ ANRPLWFAS
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGTKPAV---SVRKTSFVVKAASTPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
            QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP +TALPWFQTGVIPPAGTY+YWADP+TLFV EMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPADTALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSG+P+YPGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGDPSYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           F+QGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271

[Close]

BLAST of Spo07501.1 vs. UniProtKB/TrEMBL
Match: A0A0D3E520_BRAOL (Chlorophyll a-b binding protein, chloroplastic OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.400e-140
Identity = 243/274 (88.69%), Postives = 259/274 (94.53%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MA QALVSSSLTSSV+TARQI G +  +   S+RK SFV++AASTPPVKQ ANRPLWFAS
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGTKPAV---SVRKTSFVIKAASTPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
            QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP +TALPWFQTGVIPPAGTY+YWADP+TLFV EMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPADTALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSG+P+YPGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGDPSYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           F+QGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271

[Close]

BLAST of Spo07501.1 vs. UniProtKB/TrEMBL
Match: A0A078J4F3_BRANA (Chlorophyll a-b binding protein, chloroplastic OS=Brassica napus GN=BnaCnng31870D PE=3 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.400e-140
Identity = 243/274 (88.69%), Postives = 259/274 (94.53%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MA QALVSSSLTSSV+TARQI G +  +   S+RK SFV++AASTPPVKQ ANRPLWFAS
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGTKPAV---SVRKTSFVIKAASTPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
            QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP +TALPWFQTGVIPPAGTY+YWADP+TLFV EMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPADTALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKGFAGSG+P+YPGGP FNPLGFGKDEKS+KELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGFAGSGDPSYPGGPFFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           F+QGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 271

[Close]

BLAST of Spo07501.1 vs. ExPASy Swiss-Prot
Match: LHCA3_ARATH (Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=LHCA3 PE=1 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 5.800e-141
Identity = 245/274 (89.42%), Postives = 258/274 (94.16%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MA QALVSSSLTSSV+TARQI G++  +A +S +K+SFVV+AA+TPPVKQ ANRPLWFAS
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGSKP-VASASQKKSSFVVKAAATPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
            QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP ETALPWFQTGVIPPAGTY YWAD +TLFV EMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKG AGSG PAYPGGP FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           FIQGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of Spo07501.1 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 2.800e-135
Identity = 236/275 (85.82%), Postives = 253/275 (92.00%), Query Frame = 1


		  
Query: 1   MATQALVSSS-LTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFA 60
           MATQAL+SSS +++S E ARQI+G+R  ++ S  RK SFVVRAASTPPVKQ ANR LWFA
Sbjct: 1   MATQALISSSSISTSAEAARQIIGSR--ISQSVTRKASFVVRAASTPPVKQGANRQLWFA 60

Query: 61  SKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPE 120
           SKQSLSYLDG LPGDFGFDPLGLSDPEGTGGFIEP+WLAYGE+INGR+AMLGA GAIAPE
Sbjct: 61  SKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPE 120

Query: 121 ILGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPG 180
           ILGKAGLIPQETAL WFQTGVIPPAGTYNYWAD +TLFV EMALMGFAEHRR QDW  PG
Sbjct: 121 ILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPG 180

Query: 181 SMGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILG 240
           SMGKQYFLGLEKG  GSG+PAYPGGP+FNPLGFGKDEKS+KELKLKE+KNGRLAMLAILG
Sbjct: 181 SMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILG 240

Query: 241 YFIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           YFIQ LVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 YFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of Spo07501.1 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 6.000e-130
Identity = 235/277 (84.84%), Postives = 246/277 (88.81%), Query Frame = 1


		  
Query: 1   MATQALVSSS-LTSSVETARQILGARSGLAPSSLR-KNSFVVRAASTPPVKQNA-NRPLW 60
           MATQALVSSS LT + E  RQ   ARS   PSS+      +VRAA+TPPVKQ   +RPLW
Sbjct: 1   MATQALVSSSSLTFAAEAVRQSFRARS--LPSSVGCSRKGLVRAAATPPVKQGGVDRPLW 60

Query: 61  FASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIA 120
           FASKQSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGE+INGR+AMLGAVGAIA
Sbjct: 61  FASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIA 120

Query: 121 PEILGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYN 180
           PE LGK GLIPQETAL WFQTGVIPPAGTYNYWAD +TLFV EMALMGFAEHRR QDW  
Sbjct: 121 PEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAK 180

Query: 181 PGSMGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAI 240
           PGSMGKQYFLGLEKGF GSG PAYPGGP FNPLGFGKDEKSLKELKLKEVKNGRLAMLAI
Sbjct: 181 PGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAI 240

Query: 241 LGYFIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           LGYFIQGLVTGVGPYQNLLDH+ADPVNNN+LTSLKFH
Sbjct: 241 LGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH 275

[Close]

BLAST of Spo07501.1 vs. ExPASy Swiss-Prot
Match: LHCA5_ARATH (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana GN=LHCA5 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.100e-42
Identity = 94/222 (42.34%), Postives = 133/222 (59.91%), Query Frame = 1


		  
Query: 54  RPLWFASKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRYAMLGA 113
           R  W        YLDG+L GD+GFDPLGL  DPE        +W    E+++ R+AMLG 
Sbjct: 46  RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESL------KWYVQAELVHSRFAMLGV 105

Query: 114 VGAIAPEILGKAGLIPQETALP-WFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRR 173
            G +  ++L   G+      LP W++ G +     +++ A   TL V +  LMGFAE +R
Sbjct: 106 AGILFTDLLRTTGI----RNLPVWYEAGAVK----FDF-ASTKTLIVVQFLLMGFAETKR 165

Query: 174 LQDWYNPGSMGKQ--YFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 233
             D+ +PGS  K+  +F GLE    G  EP YPGGP+ NPLG  KD ++  + KLKE+KN
Sbjct: 166 YMDFVSPGSQAKEGSFFFGLEAALEGL-EPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKN 225

Query: 234 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNILTSL 272
           GRLAM+A+LG+F+Q  VT  GP  NL++HL++P +  I+ +L
Sbjct: 226 GRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]

BLAST of Spo07501.1 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.800e-42
Identity = 101/232 (43.53%), Postives = 135/232 (58.19%), Query Frame = 1


		  
Query: 41  RAASTPPVKQNANRPLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAY 100
           R+A+T  V  + +RPLWF       +LDGSLPGDFGFDPLGL SDPE        RW   
Sbjct: 52  RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQ 111

Query: 101 GEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVF 160
            E+++ R+AMLGA G   PE+L K G++   +   W+       AG   Y+ D  TLF+ 
Sbjct: 112 AELVHCRWAMLGAAGIFIPELLTKIGILNTPS---WYT------AGEQEYFTDTTTLFIV 171

Query: 161 EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKS- 220
           E+ L+G+AE RR  D   PG +         K   G+ +  YPGG  F+PLG+G    + 
Sbjct: 172 ELVLIGWAEGRRWADIIKPGCVNTDPIFPNNK-LTGT-DVGYPGGLWFDPLGWGSGSPAK 231

Query: 221 LKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNILTS 271
           +KEL+ KE+KNGRLAMLA++G + Q + TG GP  NL  HLADP +  I  +
Sbjct: 232 IKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAA 266

[Close]

BLAST of Spo07501.1 vs. TAIR (Arabidopsis)
Match: AT1G61520.1 (photosystem I light harvesting complex gene 3)

HSP 1 Score: 501.5 bits (1290), Expect = 3.300e-142
Identity = 245/274 (89.42%), Postives = 258/274 (94.16%), Query Frame = 1


		  
Query: 1   MATQALVSSSLTSSVETARQILGARSGLAPSSLRKNSFVVRAASTPPVKQNANRPLWFAS 60
           MA QALVSSSLTSSV+TARQI G++  +A +S +K+SFVV+AA+TPPVKQ ANRPLWFAS
Sbjct: 1   MAAQALVSSSLTSSVQTARQIFGSKP-VASASQKKSSFVVKAAATPPVKQGANRPLWFAS 60

Query: 61  KQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEI 120
            QSLSYLDGSLPGD+GFDPLGLSDPEGTGGFIEPRWLAYGEIINGR+AMLGA GAIAPEI
Sbjct: 61  SQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEI 120

Query: 121 LGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPGS 180
           LGKAGLIP ETALPWFQTGVIPPAGTY YWAD +TLFV EMALMGFAEHRRLQDWYNPGS
Sbjct: 121 LGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGS 180

Query: 181 MGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240
           MGKQYFLGLEKG AGSG PAYPGGP FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY
Sbjct: 181 MGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGY 240

Query: 241 FIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           FIQGLVTGVGPYQNLLDHLADPVNNN+LTSLKFH
Sbjct: 241 FIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]

BLAST of Spo07501.1 vs. TAIR (Arabidopsis)
Match: AT1G45474.1 (photosystem I light harvesting complex gene 5)

HSP 1 Score: 174.1 bits (440), Expect = 1.200e-43
Identity = 94/222 (42.34%), Postives = 133/222 (59.91%), Query Frame = 1


		  
Query: 54  RPLWFASKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRYAMLGA 113
           R  W        YLDG+L GD+GFDPLGL  DPE        +W    E+++ R+AMLG 
Sbjct: 46  RATWLPGLNPPPYLDGNLAGDYGFDPLGLGEDPESL------KWYVQAELVHSRFAMLGV 105

Query: 114 VGAIAPEILGKAGLIPQETALP-WFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRR 173
            G +  ++L   G+      LP W++ G +     +++ A   TL V +  LMGFAE +R
Sbjct: 106 AGILFTDLLRTTGI----RNLPVWYEAGAVK----FDF-ASTKTLIVVQFLLMGFAETKR 165

Query: 174 LQDWYNPGSMGKQ--YFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKN 233
             D+ +PGS  K+  +F GLE    G  EP YPGGP+ NPLG  KD ++  + KLKE+KN
Sbjct: 166 YMDFVSPGSQAKEGSFFFGLEAALEGL-EPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKN 225

Query: 234 GRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNILTSL 272
           GRLAM+A+LG+F+Q  VT  GP  NL++HL++P +  I+ +L
Sbjct: 226 GRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]

BLAST of Spo07501.1 vs. TAIR (Arabidopsis)
Match: AT3G61470.1 (photosystem I light harvesting complex gene 2)

HSP 1 Score: 170.6 bits (431), Expect = 1.300e-42
Identity = 113/272 (41.54%), Postives = 149/272 (54.78%), Query Frame = 1


		  
Query: 7   VSSSLTSSVETARQILGARSGLAPSSLR-KNSFVVRAASTPPVKQNA-----NRPLWFAS 66
           ++SSL +S  +A   + + S L    LR K    V A S P     A     +RP+WF  
Sbjct: 1   MASSLCAS--SAIAAISSPSFLGGKKLRLKKKLTVPAVSRPDASVRAVAADPDRPIWFPG 60

Query: 67  KQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPE 126
                +LDGSLPGDFGFDPLGLS DP+        +W    EI++ R+AMLGA G   PE
Sbjct: 61  STPPEWLDGSLPGDFGFDPLGLSSDPDSL------KWNVQAEIVHCRWAMLGAAGIFIPE 120

Query: 127 ILGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGFAEHRRLQDWYNPG 186
            L K G++   +   W+       AG   Y+ D  TLFV E+ L+G+AE RR  D   PG
Sbjct: 121 FLTKIGILNTPS---WYT------AGEQEYFTDKTTLFVVELILIGWAEGRRWADIIKPG 180

Query: 187 SMGKQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKDEKS-LKELKLKEVKNGRLAMLAIL 246
           S+         K   G+ +  YPGG  F+PLG+G    + LKEL+ KE+KNGRLAMLA++
Sbjct: 181 SVNTDPVFPNNK-LTGT-DVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVM 240

Query: 247 GYFIQGLVTGVGPYQNLLDHLADPVNNNILTS 271
           G + Q + TG GP  NL  HLADP +  I  +
Sbjct: 241 GAWFQHIYTGTGPIDNLFAHLADPGHATIFAA 253

[Close]

BLAST of Spo07501.1 vs. TAIR (Arabidopsis)
Match: AT3G47470.1 (light-harvesting chlorophyll-protein complex I subunit A4)

HSP 1 Score: 163.3 bits (412), Expect = 2.100e-40
Identity = 103/233 (44.21%), Postives = 126/233 (54.08%), Query Frame = 1


		  
Query: 42  AASTPPVKQNANRPLWFASKQSLSYLDGSLPGDFGFDPLGLS-DPEGTGGFIEPRWLAYG 101
           +A T   K  A +  W     S  YL GSL GD GFDPLGL+ DPE        +W    
Sbjct: 42  SAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENL------KWFVQA 101

Query: 102 EIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFE 161
           E++NGR+AMLG  G + PE+  K G+I       W+       AG   Y+A   TLFV E
Sbjct: 102 ELVNGRWAMLGVAGMLLPEVFTKIGII---NVPEWYD------AGKEQYFASSSTLFVIE 161

Query: 162 MALMGFAEHRRLQDWYNPGSMG-----KQYFLGLEKGFAGSGEPAYPGGPIFNPLGFGKD 221
             L  + E RR QD  NPGS+      KQY L         GE  YPGG IFNPL F   
Sbjct: 162 FILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP-------KGEVGYPGG-IFNPLNFAPT 221

Query: 222 EKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNIL 269
           +    E K KE+ NGRLAMLA LG+ +Q  VTG GP++NLL HL+DP +N I+
Sbjct: 222 Q----EAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIV 247

[Close]

BLAST of Spo07501.1 vs. TAIR (Arabidopsis)
Match: AT1G19150.1 (photosystem I light harvesting complex gene 6)

HSP 1 Score: 156.0 bits (393), Expect = 3.400e-38
Identity = 110/293 (37.54%), Postives = 150/293 (51.19%), Query Frame = 1


		  
Query: 2   ATQALVSSSLTSSVETARQILGARSGLAPSS------LRKNSFVVRAAST--------PP 61
           A  + ++S+LT S    +     R  +A +S      +R+   VVRA           PP
Sbjct: 4   AIASALTSTLTLSTSRVQNPTQRRPHVASTSSTGGRLMRERLVVVRAGKEVSSVCEPLPP 63

Query: 62  VKQNANRPLWFASKQSLSYLDGSLPGDFGFDPLGL-SDPEGTGGFIEPRWLAYGEIINGR 121
                +RPLWF       +LDGSLPGDFGFDPLGL SDP+        +W A  E+I+ R
Sbjct: 64  -----DRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPDTL------KWFAQAELIHSR 123

Query: 122 YAMLGAVGAIAPEILGKAGLIPQETALPWFQTGVIPPAGTYNYWADPFTLFVFEMALMGF 181
           +AML   G I PE L + G I       W+       AG+  Y+AD  TLFV +M LMG+
Sbjct: 124 WAMLAVTGIIIPECLERLGFIEN---FSWYD------AGSREYFADSTTLFVAQMVLMGW 183

Query: 182 AEHRRLQDWYNPGSMGKQYFLGLEKGFAGSGEP----AYPGGPIFNPLGFGK-DEKSLKE 241
           AE RR  D   PGS      + +E  +     P     YPGG  F+ + +G+   + +  
Sbjct: 184 AEGRRWADLIKPGS------VDIEPKYPHKVNPKPDVGYPGGLWFDFMMWGRGSPEPVMV 243

Query: 242 LKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH 275
           L+ KE+KNGRLAMLA LG+  Q   T   P +NL+ HLADP + N+ ++   H
Sbjct: 244 LRTKEIKNGRLAMLAFLGFCFQATYTSQDPIENLMAHLADPGHCNVFSAFTSH 270

The following BLAST results are available for this feature:

BLAST of Spo07501.1 vs. NCBI nr
BLAST of Spo07501.1 vs. UniProtKB/TrEMBL
BLAST of Spo07501.1 vs. ExPASy Swiss-Prot
BLAST of Spo07501.1 vs. TAIR (Arabidopsis)

BLAST of Spo07501.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902194805\|gb\|KNA12667.1\|	2.4e-155	100.	hypothetical protein SOVF_1238...	[more]
gi\|731361771\|ref\|XP_010692543.1\|	2.9e-148	94.8	PREDICTED: chlorophyll a-b bin...	[more]
gi\|923506939\|ref\|XP_013717384.1\|	4.9e-140	89.0	PREDICTED: chlorophyll a-b bin...	[more]
gi\|922476168\|ref\|XP_013636657.1\|	6.4e-140	89.4	PREDICTED: chlorophyll a-b bin...	[more]
gi\|922569458\|ref\|XP_013613045.1\|	6.4e-140	88.6	PREDICTED: chlorophyll a-b bin...	[more]

BLAST of Spo07501.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R1K7_SPIOL	1.7e-155	100.	Chlorophyll a-b binding protei...	[more]
A0A0J8BIC2_BETVU	2.0e-148	94.8	Chlorophyll a-b binding protei...	[more]
A0A078FL44_BRANA	3.4e-140	89.0	Chlorophyll a-b binding protei...	[more]
A0A0D3E520_BRAOL	4.4e-140	88.6	Chlorophyll a-b binding protei...	[more]
A0A078J4F3_BRANA	4.4e-140	88.6	Chlorophyll a-b binding protei...	[more]

BLAST of Spo07501.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
LHCA3_ARATH	5.8e-141	89.4	Photosystem I chlorophyll a/b-...	[more]
CB13_SOLLC	2.8e-135	85.8	Chlorophyll a-b binding protei...	[more]
CB23_PEA	6.0e-130	84.8	Chlorophyll a-b binding protei...	[more]
LHCA5_ARATH	2.1e-42	42.3	Photosystem I chlorophyll a/b-...	[more]
CB12_SOLLC	2.8e-42	43.5	Chlorophyll a-b binding protei...	[more]

BLAST of Spo07501.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G61520.1	3.3e-142	89.4	photosystem I light harvesting...	[more]
AT1G45474.1	1.2e-43	42.3	photosystem I light harvesting...	[more]
AT3G61470.1	1.3e-42	41.5	photosystem I light harvesting...	[more]
AT3G47470.1	2.1e-40	44.2	light-harvesting chlorophyll-p...	[more]
AT1G19150.1	3.4e-38	37.5	photosystem I light harvesting...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001344	Chlorophyll A-B binding protein, plant	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..274 score: 7.8E
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..243 score: 2.2
IPR023329	Chlorophyll a/b binding protein domain	GENE3D	1.10.3460.10		coord: 55..269 score: 1.2
IPR023329	Chlorophyll a/b binding protein domain	unknown	SSF103511	Chlorophyll a-b binding protein	coord: 52..270 score: 8.89
None	No IPR available	PANTHER	PTHR21649:SF14	PSI TYPE III CHLOROPHYLL A/B-BINDING PROTEIN	coord: 1..274 score: 7.8E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009765	photosynthesis, light harvesting
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009735	response to cytokinin
cellular_component	GO:0016020	membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0030076	light-harvesting complex
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0010287	plastoglobule
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding