Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGTTGTTGATAGCGTTATTTAATGACCCACTCCATCTCCTGTTGTTTTTTTTCTTCTTTTTTCTTCTCCTTCTCCTTCTCCTTCTCCTCTCGTCCTTTAACCCAACAAACAACAAATTCAATCCAAATCCAAACTTATTCAGATCAATTCACTCAATCATTGATTGCATAAAACATGATGGAAGTATAAATTAGCTGAGTTCATATCTGGATATGAAAATTAATACTATTTGCTGGATTTCTAAGATTAAATTCATCTTTCGCCGACGCCAAGGCGAAGGTTGATTGTTAATTTATAATTATTTCTTCATCTTCCTTTTTTTAAAAATTTATTTTTAGCTTTAGATCTTCATTTAGCAGCTGCAAGTACATATATTTTGTTTGTTTGGAAATTTGAGATCATGTCAGTGGTTGACTTGATACCGGGAAATTCAGTGGGAAGGGGAAAATTAGAAATAGGAAATGGCGAGTTAAGTTCGGAAGAAGATCTGACAACGAGATCAGACGGTTCAACGGAAAGCTCATCCATCGGACAACCTGATGACGATGATGTTACCGATGATGATGATGAAGATGAAGTGCAGAGCACTCTGTCGTCTCTAGCCTCTCTTGAAGACTCTCTCCCCATCAAGTCAGTATTTGTTTCTTTTTATTTATTTAATTAATTGTGATCATGTTAATTAATTGATTAAATTTGGATTTGCAGGAGGGGATTATCAAAATACTATGGAGGAAAATCGAAGTCGTACGGGAACCTGGGTGAAGTGAGTAACGTGAATGAAATAGGGAAATCAGAGAACCCGTTTAACAAGAGGAGAAGGAGTTTAATGGCTTATAATCTCATGTTTAAGAGTGGTAGTAAACAGGAGAAATTGATGATGAATAAGAAGAAGAAATCTGGAGGCTTATTCTATTCTCATTCTAATCACATCTCTATGCCCCTTTTACCCCTTGCCGAACAAGATGACGATGACAATGACGACGATAACGACGGTGTGGTTGATGATTCCTCCGATGCCGATGATTACTATACTACTACTACTGCTAGTAATGTTAGTGTTGCTAATGTTGTTTCCGATGTTAAGGATTGGCATAGATGATAGATGTAATACCAATTTCATATATACCATTCCTCCACTATCATGTTTACTTCTAAAGAGTCCAAGATGCATTTGTTTCCTCATTTTTGCTTCATTCTAACTTATAAGCGACTACC TTGTTGTTGATAGCGTTATTTAATGACCCACTCCATCTCCTGTTGTTTTTTTTCTTCTTTTTTCTTCTCCTTCTCCTTCTCCTTCTCCTCTCGTCCTTTAACCCAACAAACAACAAATTCAATCCAAATCCAAACTTATTCAGATCAATTCACTCAATCATTGATTGCATAAAACATGATGGAAGTATAAATTAGCTGAGTTCATATCTGGATATGAAAATTAATACTATTTGCTGGATTTCTAAGATTAAATTCATCTTTCGCCGACGCCAAGGCGAAGGTTGATTGTTAATTTATAATTATTTCTTCATCTTCCTTTTTTTAAAAATTTATTTTTAGCTTTAGATCTTCATTTAGCAGCTGCAAGTACATATATTTTGTTTGTTTGGAAATTTGAGATCATGTCAGTGGTTGACTTGATACCGGGAAATTCAGTGGGAAGGGGAAAATTAGAAATAGGAAATGGCGAGTTAAGTTCGGAAGAAGATCTGACAACGAGATCAGACGGTTCAACGGAAAGCTCATCCATCGGACAACCTGATGACGATGATGTTACCGATGATGATGATGAAGATGAAGTGCAGAGCACTCTGTCGTCTCTAGCCTCTCTTGAAGACTCTCTCCCCATCAAGAGGGGATTATCAAAATACTATGGAGGAAAATCGAAGTCGTACGGGAACCTGGGTGAAGTGAGTAACGTGAATGAAATAGGGAAATCAGAGAACCCGTTTAACAAGAGGAGAAGGAGTTTAATGGCTTATAATCTCATGTTTAAGAGTGGTAGTAAACAGGAGAAATTGATGATGAATAAGAAGAAGAAATCTGGAGGCTTATTCTATTCTCATTCTAATCACATCTCTATGCCCCTTTTACCCCTTGCCGAACAAGATGACGATGACAATGACGACGATAACGACGGTGTGGTTGATGATTCCTCCGATGCCGATGATTACTATACTACTACTACTGCTAGTAATGTTAGTGTTGCTAATGTTGTTTCCGATGTTAAGGATTGGCATAGATGATAGATGTAATACCAATTTCATATATACCATTCCTCCACTATCATGTTTACTTCTAAAGAGTCCAAGATGCATTTGTTTCCTCATTTTTGCTTCATTCTAACTTATAAGCGACTACC ATGTCAGTGGTTGACTTGATACCGGGAAATTCAGTGGGAAGGGGAAAATTAGAAATAGGAAATGGCGAGTTAAGTTCGGAAGAAGATCTGACAACGAGATCAGACGGTTCAACGGAAAGCTCATCCATCGGACAACCTGATGACGATGATGTTACCGATGATGATGATGAAGATGAAGTGCAGAGCACTCTGTCGTCTCTAGCCTCTCTTGAAGACTCTCTCCCCATCAAGAGGGGATTATCAAAATACTATGGAGGAAAATCGAAGTCGTACGGGAACCTGGGTGAAGTGAGTAACGTGAATGAAATAGGGAAATCAGAGAACCCGTTTAACAAGAGGAGAAGGAGTTTAATGGCTTATAATCTCATGTTTAAGAGTGGTAGTAAACAGGAGAAATTGATGATGAATAAGAAGAAGAAATCTGGAGGCTTATTCTATTCTCATTCTAATCACATCTCTATGCCCCTTTTACCCCTTGCCGAACAAGATGACGATGACAATGACGACGATAACGACGGTGTGGTTGATGATTCCTCCGATGCCGATGATTACTATACTACTACTACTGCTAGTAATGTTAGTGTTGCTAATGTTGTTTCCGATGTTAAGGATTGGCATAGATGA MSVVDLIPGNSVGRGKLEIGNGELSSEEDLTTRSDGSTESSSIGQPDDDDVTDDDDEDEVQSTLSSLASLEDSLPIKRGLSKYYGGKSKSYGNLGEVSNVNEIGKSENPFNKRRRSLMAYNLMFKSGSKQEKLMMNKKKKSGGLFYSHSNHISMPLLPLAEQDDDDNDDDNDGVVDDSSDADDYYTTTTASNVSVANVVSDVKDWHR Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo07515.1 vs. NCBI nr
Match: gi|902152354|gb|KNA05603.1| (hypothetical protein SOVF_188790 [Spinacia oleracea]) HSP 1 Score: 318.9 bits (816), Expect = 6.400e-84 Identity = 175/207 (84.54%), Postives = 175/207 (84.54%), Query Frame = 1
BLAST of Spo07515.1 vs. NCBI nr
Match: gi|731362665|ref|XP_010693006.1| (PREDICTED: uncharacterized protein LOC104906020 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 198.4 bits (503), Expect = 1.300e-47 Identity = 130/208 (62.50%), Postives = 147/208 (70.67%), Query Frame = 1
BLAST of Spo07515.1 vs. NCBI nr
Match: gi|502124536|ref|XP_004498569.1| (PREDICTED: probable serine/threonine-protein kinase kinX isoform X2 [Cicer arietinum]) HSP 1 Score: 109.0 bits (271), Expect = 1.000e-20 Identity = 78/154 (50.65%), Postives = 95/154 (61.69%), Query Frame = 1
BLAST of Spo07515.1 vs. NCBI nr
Match: gi|566178662|ref|XP_006382141.1| (hypothetical protein POPTR_0006s28790g [Populus trichocarpa]) HSP 1 Score: 103.6 bits (257), Expect = 4.200e-19 Identity = 79/150 (52.67%), Postives = 88/150 (58.67%), Query Frame = 1
BLAST of Spo07515.1 vs. NCBI nr
Match: gi|502124534|ref|XP_004498568.1| (PREDICTED: probable serine/threonine-protein kinase kinX isoform X1 [Cicer arietinum]) HSP 1 Score: 103.6 bits (257), Expect = 4.200e-19 Identity = 78/155 (50.32%), Postives = 94/155 (60.65%), Query Frame = 1
BLAST of Spo07515.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QG19_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188790 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 4.500e-84 Identity = 175/207 (84.54%), Postives = 175/207 (84.54%), Query Frame = 1
BLAST of Spo07515.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BDI4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g045320 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 8.800e-48 Identity = 130/208 (62.50%), Postives = 147/208 (70.67%), Query Frame = 1
BLAST of Spo07515.1 vs. UniProtKB/TrEMBL
Match: U5G8R1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s28790g PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.900e-19 Identity = 79/150 (52.67%), Postives = 88/150 (58.67%), Query Frame = 1
BLAST of Spo07515.1 vs. UniProtKB/TrEMBL
Match: A0A078G4A4_BRANA (BnaA09g04750D protein OS=Brassica napus GN=BnaA09g04750D PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 5.000e-19 Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 1
BLAST of Spo07515.1 vs. UniProtKB/TrEMBL
Match: M4DVD1_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.500e-18 Identity = 74/166 (44.58%), Postives = 92/166 (55.42%), Query Frame = 1
BLAST of Spo07515.1 vs. TAIR (Arabidopsis)
Match: AT5G24890.1 (unknown protein) HSP 1 Score: 97.1 bits (240), Expect = 1.400e-20 Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 1
BLAST of Spo07515.1 vs. TAIR (Arabidopsis)
Match: AT2G24550.1 (unknown protein) HSP 1 Score: 93.2 bits (230), Expect = 2.000e-19 Identity = 76/178 (42.70%), Postives = 102/178 (57.30%), Query Frame = 1
BLAST of Spo07515.1 vs. TAIR (Arabidopsis)
Match: AT4G31510.1 (unknown protein) HSP 1 Score: 82.8 bits (203), Expect = 2.700e-16 Identity = 70/156 (44.87%), Postives = 89/156 (57.05%), Query Frame = 1
BLAST of Spo07515.1 vs. TAIR (Arabidopsis)
Match: AT3G43850.1 (unknown protein) HSP 1 Score: 63.5 bits (153), Expect = 1.700e-10 Identity = 49/129 (37.98%), Postives = 79/129 (61.24%), Query Frame = 1
BLAST of Spo07515.1 vs. TAIR (Arabidopsis)
Match: AT5G21940.1 (unknown protein) HSP 1 Score: 63.2 bits (152), Expect = 2.200e-10 Identity = 52/148 (35.14%), Postives = 76/148 (51.35%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07515.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07515.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07515.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo07515.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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