Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTATTTAATATTTTTATAAAAAACATAGACGACAAAAGAAAATGTCAAAAAAGCCACGCGGCACGCAACTTCCGCCTTAAATTTATAAATAGAAATAAACCCCCTTCACTCCTTTAAATACCATTAAGAACTATCCTTTGTTCTAAAGCCGGAACAGTTGCAAAAGCAAGCAATTAAAACCAACACCAAAGCTGGTCTGGGACTCTGGGTTTTGGTTTTGGTTTTGGTTTTGGTTGCACATAAATAAAAAAAATAAAAATCACCCCAAAACTTTCACTGATACCACTGTGTTCACATGGCAAAGATCACAGCCATAACTACAAACATGTTCCCTACATTGGCCCTATTAGCAACTCTACTCTTCCTCTCCCCATCACCTTCAAATGCTCAATACAAACCACCTCTTTATGTCTTCGGCGATTCACTCTACGACGATGGTATGACTTTATACAACGGCGTTAAAGGAGCTGGTGCCGAGTTTTGGCCTTACGGCGAAACTTACTTCAAAAAGCCTTCTGGCCGATACTCCGATGGCCGCCTTATCCCCGATTTCGTAGGTACTTACCGTCACCGTCTACTGTTAAATTTAAATTCAATTAACTTATGTCCAGATTTTGTGATTATTTTGTTACCAATGGTTTGTTTGTGTAATTTTATTTGCAGCTCAATTCGCGGGGTTGCCATTTTTGCAACCCTATTTGTTACCGGGGATAAAGGATTTCACTAGAGGAATCAATTTCGCTTCAGCTGGTGCTTGTGTTCTTGTTGAACTTCGTCCTCAAACAGTATGTCAATTTGTCAATTCGTTTCTGTTAATCTTTTTGACTTCTTCTATCATTTCTGTCGGCATACTTTTTCAATTGAATTAAATGTTTTAATTTGAAAAAAAATTAATCAATTGAGCTGACCTTCTAACGAATCAATTTGAACTTTAATCAATTTGTTGAAGAAATTGTATTGAAAATGAAGCAACAATTATTGCAGAAATTGGGAGTGGTAGCTTGATTTTAGTTAAATCTGACTAGGTTTAAACTTTTTATTTTTACTGTAATTACTATTTTCACGAGATTCCAAATAAAAATTAAAAATGTTTTGGTAGGTGAAAATGGATGTCCATTAATTACCCCTGACGAAAGATCACAAGCTAATAGTGAAAAGTGAAAACATTGAACGAAAATAAAAAATGCCAACTCGAGCATCTTTCTTTATTTTTTAAATCACTACTTTACTTAATGCATACCATGATCTCAACTTAGCTGGCAGTAGCGCGAATCTGAGGAGAAAATTATTTGATGTGACAACTTTTCCTTCTTTAATGCCATGTAATTTTTACAGTTTTGTTGTTAGTCCCAGTAGATATCAATTAGTTCAATTGATTAAAATTGATTGAATAAGTGATTTAGGGTTGATTAAATTATGGCTTTGGATGATCCAGATAAATTTGAAGAGGCAAGTAGATTATTTTGTCCAAATGGTGCAAAAATTGAAGCAACAAGTTGGGGAAGGAACAGCTAATCAGCTGTTATCTGAAGCTGTATACTTGTTTAACATAGCTGGAAATGACTATGTTAACCTTCTACAGAAGAATGTTAAAAAACTTCCTGTCTCCAATTTTAAAAGGAACCAACGGATCAACATGGTCATTGGGAACCTCACTACCCATATTAAAGTAAGAATCCTTTTATTTATTCTTGCTTTTTTTTCATTTTTTCCTGTCTTTAATTTGTTTTACACTTTTTATCATCAAATTTGGTTACAGCTAAAATTGTGTATTTGTTTAATTGTTTTACACTCTACTCGTTTGATTCAAAATTTAAAAGAACGTGTGAGTACTATTATTGACATTCGTGTGAACGTATTTGAAATTAGCTAACCAATCTACCGCTCTATTTACTTGGTTTTCTGCGGATATGACATTGCTTTATTGTCTAACTTGCTAAATTTGAACCGATAGAGTTATGATGTGGATCCCCTGTCTAGTAAATGAAGTACTTAATATCTATGTTTATTTTAAGTATAACCATGGTTGAAAGAAAAAACTTAATGGAGCTACTTGATAATTACATAATTGGAAACCATATTCTCATTTAGTAAGAGTTTTTTCGTTTTTGAAATGGTCTCGTACTCTCGTGTAATAAGGAGTGTTGTCAACTTGACTTTGCAACAACTTGTTAGGACTTAAGAGCATAACACGGAATTCTCTCTAGTGAAGAGGACCCGTTTCTAATATGGAGTACTACGTCTTGCCCGCTATTCCGGGCTAGCTGATCCCGGGGGAAAGGGGGATTGGCCCGTGCAAGGTTCTGCCCTGGCATTTCATCTTACCTTCCAAAAAAAAAATTATTAAAAAAATAGAGTACCACTGTTAAATACTTAAATACGGGTCTGAGCCACACCCGTCACCAAGAGAGAGTTCACTTAACAAAACCGTAGGAGGTTTCACCTTAAAATCATATGGCAATAAGAGGAGTAGCCCATCGGATTAACTCTCTCTTCTTTTATCAATGTGGGACTCTCACACGTGTTGTTTCGTGGGTCAGATCTTAACAACTACATATAAATTGTATAAACCAGTCATTCGTACAACTGTAATTTGTGACTAATTTTGTGAATGTACGATTTTGACAATACAGACAATCTATGACCAAGGAGGAAGGAAATTTGCATTCCAAAACCTTGGTCCTCTTGGGTGCATGCCATCAATGAAGTACATGCTAAATTTCAAAGGAACTTGCGCACCGGAGCCACAAGAGCTAGCCAAGTTGCACAATGCTAAATTTGCTGCACTAGCCAAGAGATTACAAAGCCAACTACCAGGGTTCAAGTACTCCATTTACGACTTCTACACATCCTTATACCTCCGTGTTATATATGGAAGTAGCCGATATGGTACGTCTTTTACAGAGTAACTCATCCGTAATTATTTATTTATGTTTTGATCATATGATTTGATTCCTTCAATTATTCATTAGAGAGTTGGTTAAGTAGTGGCTATCAACTAATTTGTCCTCCCATACTACACCTCATCACCTTATTAATGTTTGTCAGTTTAGACGTTAAATCTTATTGTTTATACTGAACATAATCGAGTCCCAAGATACGTGGAAGATTTTACATTAAAACTCCTTAATGTAAAACTATTAAGATATGAGAATATATCAAAAGATATGTTCGAGATATTATAAGATATGGAGTAGTTTGTTTATCAACTACAAAAGCATTTCCTTGACTGGAACTATATAAACACACCTTGTAATATCTCGAGCATGTCTTTTGATATATTGTCTCATACAACGTATCTAATAAAAACATAATTTTAAAACTGTAGTAATTAGACTATGCTATTGTAGGTGTGTTAGTATGTACAGACACCAAGGCAAAAAAGCCTTTGAAGTCGGCTTTGATTAAGAAAAATACAATTGAGAAATGTCTAGTTAGTTTCATGTGACGTGGGGTCTTATACTCTTGTTTACAAATGCTAAATTGCTAAATGCATAAGTCAAGTGTTATCATTATATAATTGTAGTAAGTTGCCCTGGAAAATGACATTAAAATTGTTCATTGTCAAAAACTATTCCACGTGAATTATATGTGTAGGTAAGCAGGAGTAATCAGGATCTAATCACATTTGTCAAATTGATAATAACAGGTTTCAGAGAAAGCCAAACAGCATGTTGTGGAAGTGGATCCTACAATGGTGATTTCACTTGCCAGAAGAAAGGCTATACCTTCTCTGTTTGTAGTAATCCTAGTGAATATTTGTGGTTTGACGCCGCGCACCCAACCGACAAGGCTAACCAGGCTTTCTCTAAAGAATTCTGGAGTGGAGGATCAAGCCTTGTAGCTCCTTACAATTTGCAACAATTATTCGCCGCAAAATGATCGATCAAAGTTTATTTATGAGGATTTTTGGGAAATCTATATATACTCTTTACACTCAATTGTGATCAAAGATAAAGGAGTGTTCGGGGCTATATTTATTCTATTGATTAATATTATTAATTAATTTCCGGTACATCTTGTATGAATATGATGTATGTTAATCATACCAATAGTTTGTAGCTTTTTTTTTTTTTTTTTTTACACACTTGTCGTTTTTCTTCTTGGAAAATTTGGGAGGAAGTTAAAGGTTGAGGCCAAACCAGGCTAAGCTAGGTTGTAATAAGCGAGGGGTGATTGAATACTTGTAATCAGTAATAAGTTAAAAAGAAAATGCAAATGTTAATGATATTTACTTGGAATTATTTAATACATGTATTATCTTTGTTTCTG CTCTATTTAATATTTTTATAAAAAACATAGACGACAAAAGAAAATGTCAAAAAAGCCACGCGGCACGCAACTTCCGCCTTAAATTTATAAATAGAAATAAACCCCCTTCACTCCTTTAAATACCATTAAGAACTATCCTTTGTTCTAAAGCCGGAACAGTTGCAAAAGCAAGCAATTAAAACCAACACCAAAGCTGGTCTGGGACTCTGGGTTTTGGTTTTGGTTTTGGTTTTGGTTGCACATAAATAAAAAAAATAAAAATCACCCCAAAACTTTCACTGATACCACTGTGTTCACATGGCAAAGATCACAGCCATAACTACAAACATGTTCCCTACATTGGCCCTATTAGCAACTCTACTCTTCCTCTCCCCATCACCTTCAAATGCTCAATACAAACCACCTCTTTATGTCTTCGGCGATTCACTCTACGACGATGGTATGACTTTATACAACGGCGTTAAAGGAGCTGGTGCCGAGTTTTGGCCTTACGGCGAAACTTACTTCAAAAAGCCTTCTGGCCGATACTCCGATGGCCGCCTTATCCCCGATTTCGTAGCTCAATTCGCGGGGTTGCCATTTTTGCAACCCTATTTGTTACCGGGGATAAAGGATTTCACTAGAGGAATCAATTTCGCTTCAGCTGGTGCTTGTGTTCTTGTTGAACTTCGTCCTCAAACAATAAATTTGAAGAGGCAAGTAGATTATTTTGTCCAAATGGTGCAAAAATTGAAGCAACAAGTTGGGGAAGGAACAGCTAATCAGCTGTTATCTGAAGCTGTATACTTGTTTAACATAGCTGGAAATGACTATGTTAACCTTCTACAGAAGAATGTTAAAAAACTTCCTGTCTCCAATTTTAAAAGGAACCAACGGATCAACATGGTCATTGGGAACCTCACTACCCATATTAAAACAATCTATGACCAAGGAGGAAGGAAATTTGCATTCCAAAACCTTGGTCCTCTTGGGTGCATGCCATCAATGAAGTACATGCTAAATTTCAAAGGAACTTGCGCACCGGAGCCACAAGAGCTAGCCAAGTTGCACAATGCTAAATTTGCTGCACTAGCCAAGAGATTACAAAGCCAACTACCAGGGTTCAAGTACTCCATTTACGACTTCTACACATCCTTATACCTCCGTGTTATATATGGAAGTAGCCGATATGGTTTCAGAGAAAGCCAAACAGCATGTTGTGGAAGTGGATCCTACAATGGTGATTTCACTTGCCAGAAGAAAGGCTATACCTTCTCTGTTTGTAGTAATCCTAGTGAATATTTGTGGTTTGACGCCGCGCACCCAACCGACAAGGCTAACCAGGCTTTCTCTAAAGAATTCTGGAGTGGAGGATCAAGCCTTGTAGCTCCTTACAATTTGCAACAATTATTCGCCGCAAAATGATCGATCAAAGTTTATTTATGAGGATTTTTGGGAAATCTATATATACTCTTTACACTCAATTGTGATCAAAGATAAAGGAGTGTTCGGGGCTATATTTATTCTATTGATTAATATTATTAATTAATTTCCGGTACATCTTGTATGAATATGATGTATGTTAATCATACCAATAGTTTGTAGCTTTTTTTTTTTTTTTTTTTACACACTTGTCGTTTTTCTTCTTGGAAAATTTGGGAGGAAGTTAAAGGTTGAGGCCAAACCAGGCTAAGCTAGGTTGTAATAAGCGAGGGGTGATTGAATACTTGTAATCAGTAATAAGTTAAAAAGAAAATGCAAATGTTAATGATATTTACTTGGAATTATTTAATACATGTATTATCTTTGTTTCTG ATGGCAAAGATCACAGCCATAACTACAAACATGTTCCCTACATTGGCCCTATTAGCAACTCTACTCTTCCTCTCCCCATCACCTTCAAATGCTCAATACAAACCACCTCTTTATGTCTTCGGCGATTCACTCTACGACGATGGTATGACTTTATACAACGGCGTTAAAGGAGCTGGTGCCGAGTTTTGGCCTTACGGCGAAACTTACTTCAAAAAGCCTTCTGGCCGATACTCCGATGGCCGCCTTATCCCCGATTTCGTAGCTCAATTCGCGGGGTTGCCATTTTTGCAACCCTATTTGTTACCGGGGATAAAGGATTTCACTAGAGGAATCAATTTCGCTTCAGCTGGTGCTTGTGTTCTTGTTGAACTTCGTCCTCAAACAATAAATTTGAAGAGGCAAGTAGATTATTTTGTCCAAATGGTGCAAAAATTGAAGCAACAAGTTGGGGAAGGAACAGCTAATCAGCTGTTATCTGAAGCTGTATACTTGTTTAACATAGCTGGAAATGACTATGTTAACCTTCTACAGAAGAATGTTAAAAAACTTCCTGTCTCCAATTTTAAAAGGAACCAACGGATCAACATGGTCATTGGGAACCTCACTACCCATATTAAAACAATCTATGACCAAGGAGGAAGGAAATTTGCATTCCAAAACCTTGGTCCTCTTGGGTGCATGCCATCAATGAAGTACATGCTAAATTTCAAAGGAACTTGCGCACCGGAGCCACAAGAGCTAGCCAAGTTGCACAATGCTAAATTTGCTGCACTAGCCAAGAGATTACAAAGCCAACTACCAGGGTTCAAGTACTCCATTTACGACTTCTACACATCCTTATACCTCCGTGTTATATATGGAAGTAGCCGATATGGTTTCAGAGAAAGCCAAACAGCATGTTGTGGAAGTGGATCCTACAATGGTGATTTCACTTGCCAGAAGAAAGGCTATACCTTCTCTGTTTGTAGTAATCCTAGTGAATATTTGTGGTTTGACGCCGCGCACCCAACCGACAAGGCTAACCAGGCTTTCTCTAAAGAATTCTGGAGTGGAGGATCAAGCCTTGTAGCTCCTTACAATTTGCAACAATTATTCGCCGCAAAATGA MAKITAITTNMFPTLALLATLLFLSPSPSNAQYKPPLYVFGDSLYDDGMTLYNGVKGAGAEFWPYGETYFKKPSGRYSDGRLIPDFVAQFAGLPFLQPYLLPGIKDFTRGINFASAGACVLVELRPQTINLKRQVDYFVQMVQKLKQQVGEGTANQLLSEAVYLFNIAGNDYVNLLQKNVKKLPVSNFKRNQRINMVIGNLTTHIKTIYDQGGRKFAFQNLGPLGCMPSMKYMLNFKGTCAPEPQELAKLHNAKFAALAKRLQSQLPGFKYSIYDFYTSLYLRVIYGSSRYGFRESQTACCGSGSYNGDFTCQKKGYTFSVCSNPSEYLWFDAAHPTDKANQAFSKEFWSGGSSLVAPYNLQQLFAAK Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo07778.1 vs. NCBI nr
Match: gi|902232516|gb|KNA22658.1| (hypothetical protein SOVF_031360 [Spinacia oleracea]) HSP 1 Score: 749.6 bits (1934), Expect = 2.600e-213 Identity = 365/368 (99.18%), Postives = 367/368 (99.73%), Query Frame = 1
BLAST of Spo07778.1 vs. NCBI nr
Match: gi|31616513|gb|AAP55714.1| (GDSL-lipase [Oxybasis rubra]) HSP 1 Score: 679.5 bits (1752), Expect = 3.300e-192 Identity = 327/368 (88.86%), Postives = 349/368 (94.84%), Query Frame = 1
BLAST of Spo07778.1 vs. NCBI nr
Match: gi|731347941|ref|XP_010685239.1| (PREDICTED: GDSL esterase/lipase 2-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 664.1 bits (1712), Expect = 1.400e-187 Identity = 319/362 (88.12%), Postives = 341/362 (94.20%), Query Frame = 1
BLAST of Spo07778.1 vs. NCBI nr
Match: gi|870852878|gb|KMT04759.1| (hypothetical protein BVRB_7g169380 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 660.6 bits (1703), Expect = 1.600e-186 Identity = 317/359 (88.30%), Postives = 339/359 (94.43%), Query Frame = 1
BLAST of Spo07778.1 vs. NCBI nr
Match: gi|731347939|ref|XP_010685238.1| (PREDICTED: GDSL esterase/lipase 4-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 523.5 bits (1347), Expect = 3.000e-145 Identity = 246/359 (68.52%), Postives = 295/359 (82.17%), Query Frame = 1
BLAST of Spo07778.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RT83_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031360 PE=4 SV=1) HSP 1 Score: 749.6 bits (1934), Expect = 1.800e-213 Identity = 365/368 (99.18%), Postives = 367/368 (99.73%), Query Frame = 1
BLAST of Spo07778.1 vs. UniProtKB/TrEMBL
Match: Q7Y055_OXYRB (GDSL-lipase OS=Oxybasis rubra PE=2 SV=1) HSP 1 Score: 679.5 bits (1752), Expect = 2.300e-192 Identity = 327/368 (88.86%), Postives = 349/368 (94.84%), Query Frame = 1
BLAST of Spo07778.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXN2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g169380 PE=4 SV=1) HSP 1 Score: 660.6 bits (1703), Expect = 1.100e-186 Identity = 317/359 (88.30%), Postives = 339/359 (94.43%), Query Frame = 1
BLAST of Spo07778.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXS9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g169370 PE=4 SV=1) HSP 1 Score: 523.5 bits (1347), Expect = 2.100e-145 Identity = 246/359 (68.52%), Postives = 295/359 (82.17%), Query Frame = 1
BLAST of Spo07778.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV20_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_031350 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 7.100e-125 Identity = 224/364 (61.54%), Postives = 281/364 (77.20%), Query Frame = 1
BLAST of Spo07778.1 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2) HSP 1 Score: 251.9 bits (642), Expect = 1.100e-65 Identity = 140/343 (40.82%), Postives = 205/343 (59.77%), Query Frame = 1
BLAST of Spo07778.1 vs. ExPASy Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 2.400e-65 Identity = 139/337 (41.25%), Postives = 201/337 (59.64%), Query Frame = 1
BLAST of Spo07778.1 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2) HSP 1 Score: 247.7 bits (631), Expect = 2.000e-64 Identity = 145/381 (38.06%), Postives = 220/381 (57.74%), Query Frame = 1
BLAST of Spo07778.1 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 3.400e-64 Identity = 133/337 (39.47%), Postives = 199/337 (59.05%), Query Frame = 1
BLAST of Spo07778.1 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2) HSP 1 Score: 236.5 bits (602), Expect = 4.700e-61 Identity = 137/340 (40.29%), Postives = 196/340 (57.65%), Query Frame = 1
BLAST of Spo07778.1 vs. TAIR (Arabidopsis)
Match: AT3G14225.1 (GDSL-motif lipase 4) HSP 1 Score: 251.9 bits (642), Expect = 6.000e-67 Identity = 140/343 (40.82%), Postives = 205/343 (59.77%), Query Frame = 1
BLAST of Spo07778.1 vs. TAIR (Arabidopsis)
Match: AT1G53920.1 (GDSL-motif lipase 5) HSP 1 Score: 247.7 bits (631), Expect = 1.100e-65 Identity = 145/381 (38.06%), Postives = 220/381 (57.74%), Query Frame = 1
BLAST of Spo07778.1 vs. TAIR (Arabidopsis)
Match: AT5G40990.1 (GDSL lipase 1) HSP 1 Score: 246.9 bits (629), Expect = 1.900e-65 Identity = 133/337 (39.47%), Postives = 199/337 (59.05%), Query Frame = 1
BLAST of Spo07778.1 vs. TAIR (Arabidopsis)
Match: AT1G53990.1 (GDSL-motif lipase 3) HSP 1 Score: 236.5 bits (602), Expect = 2.600e-62 Identity = 137/340 (40.29%), Postives = 196/340 (57.65%), Query Frame = 1
BLAST of Spo07778.1 vs. TAIR (Arabidopsis)
Match: AT1G53940.1 (GDSL-motif lipase 2) HSP 1 Score: 235.7 bits (600), Expect = 4.500e-62 Identity = 132/323 (40.87%), Postives = 191/323 (59.13%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07778.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07778.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07778.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07778.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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