Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGAAAAAGCTTGTGTCAAACGTCTTCAAAAGGAGTATAGAGCACTCTGTAAAGTATGCTTCCTCCTTTTTTCTTTCTCTTGTGTCAACAGTTGGTTTCTTTTGAGCTTACTATACTATTTCTGCTGTGTATTATGATATCCTGGTGGATTTTTCTGCAGATAACCTTGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACATGTGCAGACACTTGCTTAGTTGTTTATACCCTCCGGCCTCAGCTGTCTCTCTTACTCTCAGCTCATGAATGCTGCTTAGCCTGCGTATCTTTCTACTGAGGGTATATAGTTTCTAGATATTAGATATCTCCTATTAGTTGCTTGGCTTCTTCGAGTGGTGGAGGTTACTTTACAGATCTCTTGCAGACTGCTCTCTCTAACACACACACTCAACACACGCATGCACAGTCACTTTCTCTCAGCTGAAAAAAGTACTGATAGGGTGTTCTAAGGGCATTTAGTTTCCTGTTCCTCTATCTCTTTCTGCTCATGAATGTCTTTGTACTGAGGGGATATTGTTTCTAGATAGTAGATATCTTTTTTTTCGTTGCTTGGCTTCTTTGAGGGGTAGAGGTAACTTTTAAGTGAAATATGTTTCTTGCGATCGTAATAACTTAATTCCTCAAGAAGAGGACAGAAAAAAGCTTCTGTTGATAAAATTGAATGTTCAAACATCCTATCATTATGCTGTAATGATTGTTGTCTTAATGTATGTGCCGTAGTGCTCTCTACCTCTCTATATTTAATGAAAATATTGGAGAAACAAAATTTCTTGTATGACAGAGCAAATCTCACCCCAACTCACTATTATACTGCAGTGTTTTAGAACTCAGCTTTTGTGTTTTTTTTAAGAAAAAGAGACGGAAGCAGAAATCTCATACCAGGCCTCTTTTTTTCTGGTTATCTTTCTGTGAAATGGATGTTCAAAAATTTATGCAATCACTCTTTAGATATCCCCACAAGATGGAGTTATTTCTCTTGTAATTTTGCTTTTATGCATACATTGTTCCATCATGCATTGAGATGATGTAGTTGCATTTTTGCAGGAGCCTGTATCTCATGTTGAGGCTCGCCCCTCTGCCAATAACATTCTTGAATGGTGTAAGTTTTATTTCAACAGTCCTTCACTGAAAATTTAAACTAAGTTTCCCTTATTTTATTTGCAAAACAATTCGAACTGAAGCATACATTTTAGTTTTAGTATACTAGTAGGTGGCAAATAGGGGAAATTTGGCGGTTTAAGTAAGTCTGCCTTAATCTGGCAAGTGCTACTTGCTCAATGATCTTTTGGAAAACGGAGAATGATGTGACCATATTTGTTGGACGTTTCTGCTATACTTTTTTTTTGGGATAAAGGGAAATGGAGAAGAAGGGAGGGGATTAAGTTCCATTGTTCGGAAAAGAGGTTGGAGGAAGGAAGGGGACCCTTGTTTCGAGAAAGGGATTGGGGAAAGGAAGGGTGGAGAGGGAGGGATCCCTTTTCCATCCCTCTTTAATAACATCCCTCTAAAACTGGAAAGATTTGGAAGGAAAATGGAGCTTCACCTTCCCCTCCCTTTCTTTCCCCTCTCGTTCGTCTTTCCTTACCCTCCTTTCCTATCTTGCTATCCAAACAAAGTGGTAGTAGATGTAGCTTTAATTAAGCTGACATTCTCTTTAGATCAAATTCTCCACCATGTTTTCAAAATTTTAGAAAAAAAATTATTTACTATTTGACTATTCTTATTTTTTTTTTAAACGGGGAGGTTTGGAGTATAATTAAACTAGAAGTCCTTACACTTAGATTATCAATTTCATCAACTTATAATCTCCACAAAATAAGGATGCCCTGTTTTTGGTGGTTTCACTAATGATATTGGACCGTGTACTTGTTTGTTTAGGGTTTTTAGTTTTCAAATTTTATTACTATATGTTGCATTAGCCTTAGTTTTGTACTGATCTCTCTTTCTTATTTGTGTTTTGTCTTCCGGTCTTGTTTTCTATTTCAGATTATGTACTCGAGGGAAGTGAAGGAACACCTTTTGCAGGTTTGTCTACTTATTTTTCCTATGTGTTTATTTTTTCCTAGTTGTGAACTCTTGTGACTCGGTCATTGCTCTTGTTTTCTCGTGTGAACTTCATTTCCGTCTGTTACTGTTCTTACTTTTCCTGTCTTATGAAGGTGGATATTATTATGGGAGGATCACATTTCCATCTGAATATCCATTTAAACCACCATCAATCAGGTATCTGTGTTGCTTAATTTGTTGCTAGTAATCTTCTCTGTTGACAGCATACAGATTTTTGTGGCTTTGGCATTCAAATGTTTTATTATGAGCAGGATGACGACTCCCAATGGACGGTTTATGACTGATACAAAGATATGCTTGTCTATGAGTGATTGTAAGTGTGATTTGAGCTCCATAGATGCTTTTTTATGTTCATTAGTCGTTGATAATGATTTGGCCGATAATGATAATTTATGTATTTGCAGTTCATCCGGAGAGTTGGAATCCAATGTGGTCAGTATCCAGGTAAGATACAGTGTGTTAACAGGTGTTCAATGCCAAAGGTTAAATTTTGTTAAGGTTAAATTTAGGAAGATTTTTAAGGGAGTCAATTTAAAACATTTATGGAAATCAAGTATTTCATCTTTTGCTGGATTCAATAACATAGAGCAGCTTTTTCAGTTTTACATCAAATTTTTTGTATTATCATTGAAGTAACGAAGTTTCGGAGATCTTCTTACCCAAATGCAGGATATATGGAGTAGTTATGTATCATTATAAATTCCTCGTTTCTTAGCTGCTGTTGGTGAATGAAGTAAAGACCATTTTTATGTCTTCCTGTAATTTTAATGCATGGCATTGACTACTCTTTGTTTTTGATGCAGTATTCTTACAGGTCTGCTCTCCTTCATGGTAAGTTTATTCTTGCTAGTTGATTAAAATTGTTAATGCTGCTTTTATTTTTTTACTGAGCAAACCACTTTCATTTCATCTGTAAAATTCAGTGATAATTACATGTGTTTACTCGCATCTCTAGTAACACTGTCAGATGGATATGCCTAGTTTCAGTTGGTATATTTGGTTGTTTAAGTCTCTCTTTTGTCTTGCAGATGGATAAAAGCCCTACTACAGGAAGCGTTTCAACATCTGCTGAGGAAAAACAAAGTTTAGCCAAGACTTCACTTGCTTATAATTGTAAAATGTAAGTGAATGACAGTTTACTGTTGGTTTCTGTTTTCCTTTTGGCTGTTGTCTTACAAAGTCTGCTGATTAGTATTGCATATAAAGCCATTCTGCCTCTTGGTTTGTTATATTACACGATGCGCATTAAGGCCTCATGCACACAATTACATTTTATTTGCCATTTTGTCATACAATTTGCTCTTCATACGTTGGCGCTTCAGATGACTAAAGTCAAGGTTATGAATTGACATTTTGCTCTTATCATTTCTTACACGTCATTTAGGTCAAAATTTACTGTGAATTGAAACATCAAATAAGCTGCTTTTCTTTTTTCAATTTTTTTTTTCACTCTGTTTCATCATATCTTCAGATGAATCCTGTCTGAGTATGAAATAATCCTGAAATTGGAAATACAGCGGACTCTGTTGGTTAATTCAGTCGTGTTTGGTTTTGTAACTTCTCTTTTTTCTAGCCCTACTTTCAGGAAATTGTTTCCGGAATACGTGGAGAAGTACAACGAGCAGCTTGCTGAGCAAGCTCGGTTAGTGGCATCTTCAGTGCCTCCACAAGAAGAATCATCGCTTCTCAATTCAGAGACAGTTGATAACAATAACATGCAAGGTAGAGTAGCGACAGCAGAAGACGGGGACAGAAGAAATAATCAGAAGAAATCCTTCCCAACCTGGATGCTGTTGTTGCTCTTGTCAATATTTGGTTTAGTAATGTCACTGCCTCTTCTTGAACACTGATGATGTCACAGCAAAATTTAGGCTTTTTACCTAAGTGGGTAATCTTCAAACCATAAGTTGTTATAGATGTGTATGTGAGGTGGTCATATTTTTCACATCCAAAATTACCTTTTGGGGTGTTCAATGTCTTGTGATGACACTATACTAACTTGTACAGTCTATGGAATTCTATTTCTTCCTATATTCATTTCTCTAATCGAAAGTTTTGTTAAAGTGTTGAAATTATGTCATGATTATAATTTGTTACAAATTCGAACCGATGTCCTTGGAGAAAAACACAATTTGTCCCTTTCTACTATGACCGCGATGGTTAACCGAAGTCAAGACGCGTAGGAGTGTG ATGGCTGAAAAAGCTTGTGTCAAACGTCTTCAAAAGGAGTATAGAGCACTCTGTAAAGAGCCTGTATCTCATGTTGAGGCTCGCCCCTCTGCCAATAACATTCTTGAATGGTATTATGTACTCGAGGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTATTATGGGAGGATCACATTTCCATCTGAATATCCATTTAAACCACCATCAATCAGGATGACGACTCCCAATGGACGGTTTATGACTGATACAAAGATATGCTTGTCTATGAGTGATTTTCATCCGGAGAGTTGGAATCCAATGTGGTCAGTATCCAGTATTCTTACAGGTCTGCTCTCCTTCATGATGGATAAAAGCCCTACTACAGGAAGCGTTTCAACATCTGCTGAGGAAAAACAAAGTTTAGCCAAGACTTCACTTGCTTATAATTGTAAAATCCCTACTTTCAGGAAATTGTTTCCGGAATACGTGGAGAAGTACAACGAGCAGCTTGCTGAGCAAGCTCGGTTAGTGGCATCTTCAGTGCCTCCACAAGAAGAATCATCGCTTCTCAATTCAGAGACAGTTGATAACAATAACATGCAAGGTAGAGTAGCGACAGCAGAAGACGGGGACAGAAGAAATAATCAGAAGAAATCCTTCCCAACCTGGATGCTGTTGTTGCTCTTGTCAATATTTGGTTTAGTAATGTCACTGCCTCTTCTTGAACACTGATGATGTCACAGCAAAATTTAGGCTTTTTACCTAAGTGGGTAATCTTCAAACCATAAGTTGTTATAGATGTGTATGTGAGGTGGTCATATTTTTCACATCCAAAATTACCTTTTGGGGTGTTCAATGTCTTGTGATGACACTATACTAACTTGTACAGTCTATGGAATTCTATTTCTTCCTATATTCATTTCTCTAATCGAAAGTTTTGTTAAAGTGTTGAAATTATGTCATGATTATAATTTGTTACAAATTCGAACCGATGTCCTTGGAGAAAAACACAATTTGTCCCTTTCTACTATGACCGCGATGGTTAACCGAAGTCAAGACGCGTAGGAGTGTG ATGGCTGAAAAAGCTTGTGTCAAACGTCTTCAAAAGGAGTATAGAGCACTCTGTAAAGAGCCTGTATCTCATGTTGAGGCTCGCCCCTCTGCCAATAACATTCTTGAATGGTATTATGTACTCGAGGGAAGTGAAGGAACACCTTTTGCAGGTGGATATTATTATGGGAGGATCACATTTCCATCTGAATATCCATTTAAACCACCATCAATCAGGATGACGACTCCCAATGGACGGTTTATGACTGATACAAAGATATGCTTGTCTATGAGTGATTTTCATCCGGAGAGTTGGAATCCAATGTGGTCAGTATCCAGTATTCTTACAGGTCTGCTCTCCTTCATGATGGATAAAAGCCCTACTACAGGAAGCGTTTCAACATCTGCTGAGGAAAAACAAAGTTTAGCCAAGACTTCACTTGCTTATAATTGTAAAATCCCTACTTTCAGGAAATTGTTTCCGGAATACGTGGAGAAGTACAACGAGCAGCTTGCTGAGCAAGCTCGGTTAGTGGCATCTTCAGTGCCTCCACAAGAAGAATCATCGCTTCTCAATTCAGAGACAGTTGATAACAATAACATGCAAGGTAGAGTAGCGACAGCAGAAGACGGGGACAGAAGAAATAATCAGAAGAAATCCTTCCCAACCTGGATGCTGTTGTTGCTCTTGTCAATATTTGGTTTAGTAATGTCACTGCCTCTTCTTGAACACTGA MAEKACVKRLQKEYRALCKEPVSHVEARPSANNILEWYYVLEGSEGTPFAGGYYYGRITFPSEYPFKPPSIRMTTPNGRFMTDTKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDKSPTTGSVSTSAEEKQSLAKTSLAYNCKIPTFRKLFPEYVEKYNEQLAEQARLVASSVPPQEESSLLNSETVDNNNMQGRVATAEDGDRRNNQKKSFPTWMLLLLLSIFGLVMSLPLLEH Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo07807.1 vs. NCBI nr
Match: gi|902240263|gb|KNA25944.1| (hypothetical protein SOVF_001600 [Spinacia oleracea]) HSP 1 Score: 475.3 bits (1222), Expect = 6.100e-131 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1
BLAST of Spo07807.1 vs. NCBI nr
Match: gi|731347880|ref|XP_010685207.1| (PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 406.0 bits (1042), Expect = 4.600e-110 Identity = 205/237 (86.50%), Postives = 217/237 (91.56%), Query Frame = 1
BLAST of Spo07807.1 vs. NCBI nr
Match: gi|297742924|emb|CBI35791.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 341.7 bits (875), Expect = 1.100e-90 Identity = 168/236 (71.19%), Postives = 194/236 (82.20%), Query Frame = 1
BLAST of Spo07807.1 vs. NCBI nr
Match: gi|225441969|ref|XP_002264017.1| (PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Vitis vinifera]) HSP 1 Score: 341.7 bits (875), Expect = 1.100e-90 Identity = 168/236 (71.19%), Postives = 194/236 (82.20%), Query Frame = 1
BLAST of Spo07807.1 vs. NCBI nr
Match: gi|1009111493|ref|XP_015901225.1| (PREDICTED: ubiquitin-conjugating enzyme E2 34-like [Ziziphus jujuba]) HSP 1 Score: 339.0 bits (868), Expect = 6.800e-90 Identity = 168/238 (70.59%), Postives = 193/238 (81.09%), Query Frame = 1
BLAST of Spo07807.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S3W6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_001600 PE=4 SV=1) HSP 1 Score: 475.3 bits (1222), Expect = 4.300e-131 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1
BLAST of Spo07807.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BXQ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g169090 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 3.200e-110 Identity = 205/237 (86.50%), Postives = 217/237 (91.56%), Query Frame = 1
BLAST of Spo07807.1 vs. UniProtKB/TrEMBL
Match: D7TZJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00280 PE=4 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 7.400e-91 Identity = 168/236 (71.19%), Postives = 194/236 (82.20%), Query Frame = 1
BLAST of Spo07807.1 vs. UniProtKB/TrEMBL
Match: A0A0D3DWU9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 337.8 bits (865), Expect = 1.100e-89 Identity = 173/244 (70.90%), Postives = 197/244 (80.74%), Query Frame = 1
BLAST of Spo07807.1 vs. UniProtKB/TrEMBL
Match: A0A067EIR1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026499mg PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 1.800e-89 Identity = 171/238 (71.85%), Postives = 192/238 (80.67%), Query Frame = 1
BLAST of Spo07807.1 vs. ExPASy Swiss-Prot
Match: UBC34_ARATH (Ubiquitin-conjugating enzyme E2 34 OS=Arabidopsis thaliana GN=UBC34 PE=2 SV=1) HSP 1 Score: 329.7 bits (844), Expect = 2.600e-89 Identity = 166/241 (68.88%), Postives = 196/241 (81.33%), Query Frame = 1
BLAST of Spo07807.1 vs. ExPASy Swiss-Prot
Match: UBC33_ARATH (Probable ubiquitin-conjugating enzyme E2 33 OS=Arabidopsis thaliana GN=UBC33 PE=2 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.000e-85 Identity = 161/242 (66.53%), Postives = 194/242 (80.17%), Query Frame = 1
BLAST of Spo07807.1 vs. ExPASy Swiss-Prot
Match: UB2J2_HUMAN (Ubiquitin-conjugating enzyme E2 J2 OS=Homo sapiens GN=UBE2J2 PE=1 SV=3) HSP 1 Score: 192.6 bits (488), Expect = 5.000e-48 Identity = 90/169 (53.25%), Postives = 123/169 (72.78%), Query Frame = 1
BLAST of Spo07807.1 vs. ExPASy Swiss-Prot
Match: UB2J2_MOUSE (Ubiquitin-conjugating enzyme E2 J2 OS=Mus musculus GN=Ube2j2 PE=1 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.100e-47 Identity = 89/169 (52.66%), Postives = 122/169 (72.19%), Query Frame = 1
BLAST of Spo07807.1 vs. ExPASy Swiss-Prot
Match: UB2J2_BOVIN (Ubiquitin-conjugating enzyme E2 J2 OS=Bos taurus GN=UBE2J2 PE=2 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.100e-47 Identity = 89/169 (52.66%), Postives = 122/169 (72.19%), Query Frame = 1
BLAST of Spo07807.1 vs. TAIR (Arabidopsis)
Match: AT1G17280.1 (ubiquitin-conjugating enzyme 34) HSP 1 Score: 329.7 bits (844), Expect = 1.500e-90 Identity = 166/241 (68.88%), Postives = 196/241 (81.33%), Query Frame = 1
BLAST of Spo07807.1 vs. TAIR (Arabidopsis)
Match: AT5G50430.1 (ubiquitin-conjugating enzyme 33) HSP 1 Score: 316.2 bits (809), Expect = 1.700e-86 Identity = 161/242 (66.53%), Postives = 194/242 (80.17%), Query Frame = 1
BLAST of Spo07807.1 vs. TAIR (Arabidopsis)
Match: AT3G17000.1 (ubiquitin-conjugating enzyme 32) HSP 1 Score: 124.8 bits (312), Expect = 7.200e-29 Identity = 59/131 (45.04%), Postives = 82/131 (62.60%), Query Frame = 1
BLAST of Spo07807.1 vs. TAIR (Arabidopsis)
Match: AT5G56150.1 (ubiquitin-conjugating enzyme 30) HSP 1 Score: 76.3 bits (186), Expect = 2.900e-14 Identity = 39/115 (33.91%), Postives = 61/115 (53.04%), Query Frame = 1
BLAST of Spo07807.1 vs. TAIR (Arabidopsis)
Match: AT3G13550.1 (Ubiquitin-conjugating enzyme family protein) HSP 1 Score: 72.0 bits (175), Expect = 5.500e-13 Identity = 37/113 (32.74%), Postives = 58/113 (51.33%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07807.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07807.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07807.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07807.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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