Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTGTACAAGATTGACCGGTATCCATGCATCTACGCTGAAAACATGCAATTTTTTTTCAGAAAATGGTGGAGTTGTGTATTTAGACAGTATAAAATGGCCGATTCTGACATTTGGACACCGACTCATACTAGGTACTTATATGACAAACTAATACATCGCGGGTCCATCTTATACTATAATTCTATGCCAAAAAGTGTCTTTTAAAAAATAAATAAATTGCTACAATGCCTTTATTTCTTGTGCCTTGTTTTCTTTACTTTCTACTCCCTCTACATATATTCAGTCTGATATAAACATGAGCATACACTTCCTTAAAACACTCTTATGAAGCATTCTTTCTGCTAAAAAGCCTAAACCTCGCTTATCGAACAATATTACTCCTCTCCCTTTCACTTTAAACCCTTAAGAGATGGCTTCACCAGCTGACAATCTCCAGGGACCTTTAAAATACCAGGTATGGGAATATACCATGGATCAGATTCTGAGTTCCTCATGCATGCTTTACCTTTTTCCTGTTTCTTGTACTAATATCTTTTTAACTCGTGTTAACAGACTTGGACCTTGAGAGTTCCAATACACTGTGAAGGTTGCAAGAAGAAAGTGAAGAAAATTCTTCAGAAGATAGATGGTAAGTTCGTTTTTTTTTTTTTTTTGAGGGAAATCGATGGGAAGTTCGTAACTGACCTCGACTCGTTTTGGTTGTTTTAGTAATTATTATTTCATATATGACTTGTGTTTGGCCTATGTTGTGCTTGTGCATCACTGCATAACTTGTTTTGCTATTATTTTCCGGGTTTCATCGTACTGATAGTTCTGTTTCATATTATGCTTATTTCTGCAGGTGTTTATATGACAACAATTGATGCTCAACAACACAAGGTTACTGTGACTGGAAATATAGAAGCTCAGACTCTTCTACAAAAACTATCTAAATCTGGTAAACCTGCAGAATTGTGGGCAGACCAGTCTGTGAAGAAAGATAACATGTCGGAAGCACCAAGTAATGCGAAAGAAAAGATTAAGGCCGCAAAAGAAAGCGATGAGAAAAACATCAAAAAAACCCAGAAAGGAAATGCAAAAGCTACTGGAGAAGGTGGTCAGAAAAAAGAAAAAAAATCAGCTGAGAATCATGCAAACCCTGGCAAAACTCTTAAAGAAGGTGAAAACTCTAAAACGGTTCCTCCTCTTGTTGGTGAAAAGTCATTACAGTTAGAGAATGCAGGAGTTGATGGAAACAGCAATGGTGGAGGTAGTGATAAAAAGAAGAAAAAGAAAAGTAAAGGAAACAGTGGTAATGCTGGAAATGACAAGAACCCGATAAAACCACCAGCATCAACCCCTTCACCTGTATCCGTACCAGAAGCAGCACCAGCTATAGCGTCTGAGACCCCGGCACCAACGCCACCTGCACCAGCTTCAGTGCCTCAAGAATTACCAGTTCCTGCAGAATCACCAGTCCCCATGGAAACACTTGCACCTGAACCAGCACAAGGATTAACACCAGCCCCAACACCAGGACCGGCACCGGCACCGGCACCGGCACCAGTAGCAGTCTCAACACAAGCACCAACACCAACACCAGGAGATGGGTATTCAATGCAGCATGTCAAGCCCAACGAACCAATGAACCATGGGCCTCCAAACAATTTTGGGCCCCCGAATCAAGGTTACCCAGACGGGCCATATCACAGGCCTACTGATACCTTTGATCATCCAAATCAGCAAGGTTACATGTATCCTCCAGCTCCTCAACTCGGAATCAGTTACAGTATGGCACAACCTAGCAGTAGTTCCTCATACTATGCCCCACCACACTACGCTTACGAATATCCGCAGTATCCCATGATGCATATTCCCCCACCTCCACCGCCGAATCCGATCTATGAGGTACCTGATGATGAACATTATTACAATGACAATGGAAGTCAATGTCGTCTGATGTAGTATCATAAACTCAGAGTTGCTCCAAGAAGGCTTCAGAAGAACATATGCATTATACTGTTAAACGCCAAAGAAAAAGGAATGTAAAATTCAGATCGGAAATTCTATTTTCTTCCTGAATTTTATTTTATATTACTTAATTATCAATTGGTAGGATTTCTTCGTAGTTAGGTAATATCCATGTTAGAATATGTATATTTTGTTAGTTGTGACTTGTGACTTGTGAGGAATGAAAGATCTCTCTTTTTCTTTTCTTTACTGTCTGACGTGTATCCTCCTTCATTCTGATATGTAAAGCCATACTTTTTCGTTACTAGTGTCGTTTTTATTGTCTTCACTTTCCGTTTTTGTTCTAGACTATAGACACGGG TATTGTACAAGATTGACCGGTATCCATGCATCTACGCTGAAAACATGCAATTTTTTTTCAGAAAATGGTGGAGTTGTGTATTTAGACAGTATAAAATGGCCGATTCTGACATTTGGACACCGACTCATACTAGGTACTTATATGACAAACTAATACATCGCGGGTCCATCTTATACTATAATTCTATGCCAAAAAGTGTCTTTTAAAAAATAAATAAATTGCTACAATGCCTTTATTTCTTGTGCCTTGTTTTCTTTACTTTCTACTCCCTCTACATATATTCAGTCTGATATAAACATGAGCATACACTTCCTTAAAACACTCTTATGAAGCATTCTTTCTGCTAAAAAGCCTAAACCTCGCTTATCGAACAATATTACTCCTCTCCCTTTCACTTTAAACCCTTAAGAGATGGCTTCACCAGCTGACAATCTCCAGGGACCTTTAAAATACCAGACTTGGACCTTGAGAGTTCCAATACACTGTGAAGGTTGCAAGAAGAAAGTGAAGAAAATTCTTCAGAAGATAGATGGTGTTTATATGACAACAATTGATGCTCAACAACACAAGGTTACTGTGACTGGAAATATAGAAGCTCAGACTCTTCTACAAAAACTATCTAAATCTGGTAAACCTGCAGAATTGTGGGCAGACCAGTCTGTGAAGAAAGATAACATGTCGGAAGCACCAAGTAATGCGAAAGAAAAGATTAAGGCCGCAAAAGAAAGCGATGAGAAAAACATCAAAAAAACCCAGAAAGGAAATGCAAAAGCTACTGGAGAAGGTGGTCAGAAAAAAGAAAAAAAATCAGCTGAGAATCATGCAAACCCTGGCAAAACTCTTAAAGAAGGTGAAAACTCTAAAACGGTTCCTCCTCTTGTTGGTGAAAAGTCATTACAGTTAGAGAATGCAGGAGTTGATGGAAACAGCAATGGTGGAGGTAGTGATAAAAAGAAGAAAAAGAAAAGTAAAGGAAACAGTGGTAATGCTGGAAATGACAAGAACCCGATAAAACCACCAGCATCAACCCCTTCACCTGTATCCGTACCAGAAGCAGCACCAGCTATAGCGTCTGAGACCCCGGCACCAACGCCACCTGCACCAGCTTCAGTGCCTCAAGAATTACCAGTTCCTGCAGAATCACCAGTCCCCATGGAAACACTTGCACCTGAACCAGCACAAGGATTAACACCAGCCCCAACACCAGGACCGGCACCGGCACCGGCACCGGCACCAGTAGCAGTCTCAACACAAGCACCAACACCAACACCAGGAGATGGGTATTCAATGCAGCATGTCAAGCCCAACGAACCAATGAACCATGGGCCTCCAAACAATTTTGGGCCCCCGAATCAAGGTTACCCAGACGGGCCATATCACAGGCCTACTGATACCTTTGATCATCCAAATCAGCAAGGTTACATGTATCCTCCAGCTCCTCAACTCGGAATCAGTTACAGTATGGCACAACCTAGCAGTAGTTCCTCATACTATGCCCCACCACACTACGCTTACGAATATCCGCAGTATCCCATGATGCATATTCCCCCACCTCCACCGCCGAATCCGATCTATGAGGTACCTGATGATGAACATTATTACAATGACAATGGAAGTCAATGTCGTCTGATGTAGTATCATAAACTCAGAGTTGCTCCAAGAAGGCTTCAGAAGAACATATGCATTATACTGTTAAACGCCAAAGAAAAAGGAATGTAAAATTCAGATCGGAAATTCTATTTTCTTCCTGAATTTTATTTTATATTACTTAATTATCAATTGGTAGGATTTCTTCGTAGTTAGGTAATATCCATGTTAGAATATGTATATTTTGTTAGTTGTGACTTGTGACTTGTGAGGAATGAAAGATCTCTCTTTTTCTTTTCTTTACTGTCTGACGTGTATCCTCCTTCATTCTGATATGTAAAGCCATACTTTTTCGTTACTAGTGTCGTTTTTATTGTCTTCACTTTCCGTTTTTGTTCTAGACTATAGACACGGG ATGGCTTCACCAGCTGACAATCTCCAGGGACCTTTAAAATACCAGACTTGGACCTTGAGAGTTCCAATACACTGTGAAGGTTGCAAGAAGAAAGTGAAGAAAATTCTTCAGAAGATAGATGGTGTTTATATGACAACAATTGATGCTCAACAACACAAGGTTACTGTGACTGGAAATATAGAAGCTCAGACTCTTCTACAAAAACTATCTAAATCTGGTAAACCTGCAGAATTGTGGGCAGACCAGTCTGTGAAGAAAGATAACATGTCGGAAGCACCAAGTAATGCGAAAGAAAAGATTAAGGCCGCAAAAGAAAGCGATGAGAAAAACATCAAAAAAACCCAGAAAGGAAATGCAAAAGCTACTGGAGAAGGTGGTCAGAAAAAAGAAAAAAAATCAGCTGAGAATCATGCAAACCCTGGCAAAACTCTTAAAGAAGGTGAAAACTCTAAAACGGTTCCTCCTCTTGTTGGTGAAAAGTCATTACAGTTAGAGAATGCAGGAGTTGATGGAAACAGCAATGGTGGAGGTAGTGATAAAAAGAAGAAAAAGAAAAGTAAAGGAAACAGTGGTAATGCTGGAAATGACAAGAACCCGATAAAACCACCAGCATCAACCCCTTCACCTGTATCCGTACCAGAAGCAGCACCAGCTATAGCGTCTGAGACCCCGGCACCAACGCCACCTGCACCAGCTTCAGTGCCTCAAGAATTACCAGTTCCTGCAGAATCACCAGTCCCCATGGAAACACTTGCACCTGAACCAGCACAAGGATTAACACCAGCCCCAACACCAGGACCGGCACCGGCACCGGCACCGGCACCAGTAGCAGTCTCAACACAAGCACCAACACCAACACCAGGAGATGGGTATTCAATGCAGCATGTCAAGCCCAACGAACCAATGAACCATGGGCCTCCAAACAATTTTGGGCCCCCGAATCAAGGTTACCCAGACGGGCCATATCACAGGCCTACTGATACCTTTGATCATCCAAATCAGCAAGGTTACATGTATCCTCCAGCTCCTCAACTCGGAATCAGTTACAGTATGGCACAACCTAGCAGTAGTTCCTCATACTATGCCCCACCACACTACGCTTACGAATATCCGCAGTATCCCATGATGCATATTCCCCCACCTCCACCGCCGAATCCGATCTATGAGGTACCTGATGATGAACATTATTACAATGACAATGGAAGTCAATGTCGTCTGATGTAG MASPADNLQGPLKYQTWTLRVPIHCEGCKKKVKKILQKIDGVYMTTIDAQQHKVTVTGNIEAQTLLQKLSKSGKPAELWADQSVKKDNMSEAPSNAKEKIKAAKESDEKNIKKTQKGNAKATGEGGQKKEKKSAENHANPGKTLKEGENSKTVPPLVGEKSLQLENAGVDGNSNGGGSDKKKKKKSKGNSGNAGNDKNPIKPPASTPSPVSVPEAAPAIASETPAPTPPAPASVPQELPVPAESPVPMETLAPEPAQGLTPAPTPGPAPAPAPAPVAVSTQAPTPTPGDGYSMQHVKPNEPMNHGPPNNFGPPNQGYPDGPYHRPTDTFDHPNQQGYMYPPAPQLGISYSMAQPSSSSSYYAPPHYAYEYPQYPMMHIPPPPPPNPIYEVPDDEHYYNDNGSQCRLM Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo07969.1 vs. NCBI nr
Match: gi|902220611|gb|KNA18663.1| (hypothetical protein SOVF_068720 [Spinacia oleracea]) HSP 1 Score: 777.7 bits (2007), Expect = 9.900e-222 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1
BLAST of Spo07969.1 vs. NCBI nr
Match: gi|731346363|ref|XP_010684412.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 358.6 bits (919), Expect = 1.400e-95 Identity = 249/440 (56.59%), Postives = 279/440 (63.41%), Query Frame = 1
BLAST of Spo07969.1 vs. NCBI nr
Match: gi|48995219|gb|AAT48364.1| (putative heavy-metal-associated domain-containing protein [Chenopodiastrum murale]) HSP 1 Score: 156.4 bits (394), Expect = 1.100e-34 Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 1
BLAST of Spo07969.1 vs. NCBI nr
Match: gi|225437292|ref|XP_002266955.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2 [Vitis vinifera]) HSP 1 Score: 146.0 bits (367), Expect = 1.500e-31 Identity = 108/237 (45.57%), Postives = 135/237 (56.96%), Query Frame = 1
BLAST of Spo07969.1 vs. NCBI nr
Match: gi|645258758|ref|XP_008235035.1| (PREDICTED: pheromone-processing carboxypeptidase KEX1-like [Prunus mume]) HSP 1 Score: 136.0 bits (341), Expect = 1.500e-28 Identity = 94/201 (46.77%), Postives = 118/201 (58.71%), Query Frame = 1
BLAST of Spo07969.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGP2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_068720 PE=4 SV=1) HSP 1 Score: 777.7 bits (2007), Expect = 6.900e-222 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1
BLAST of Spo07969.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BX23_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g164120 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 1.000e-95 Identity = 249/440 (56.59%), Postives = 279/440 (63.41%), Query Frame = 1
BLAST of Spo07969.1 vs. UniProtKB/TrEMBL
Match: Q66ZP3_CHEMU (Putative heavy-metal-associated domain-containing protein (Fragment) OS=Chenopodiastrum murale PE=2 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 7.500e-35 Identity = 76/93 (81.72%), Postives = 85/93 (91.40%), Query Frame = 1
BLAST of Spo07969.1 vs. UniProtKB/TrEMBL
Match: D7U255_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00050 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.000e-31 Identity = 108/237 (45.57%), Postives = 135/237 (56.96%), Query Frame = 1
BLAST of Spo07969.1 vs. UniProtKB/TrEMBL
Match: M5VJL7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020872mg PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 3.200e-25 Identity = 88/200 (44.00%), Postives = 117/200 (58.50%), Query Frame = 1
BLAST of Spo07969.1 vs. ExPASy Swiss-Prot
Match: ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 1.300e-8 Identity = 28/65 (43.08%), Postives = 42/65 (64.62%), Query Frame = 1
BLAST of Spo07969.1 vs. ExPASy Swiss-Prot
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana GN=HIPP20 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 8.600e-8 Identity = 23/65 (35.38%), Postives = 45/65 (69.23%), Query Frame = 1
BLAST of Spo07969.1 vs. ExPASy Swiss-Prot
Match: HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.500e-7 Identity = 24/66 (36.36%), Postives = 45/66 (68.18%), Query Frame = 1
BLAST of Spo07969.1 vs. ExPASy Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 9.500e-7 Identity = 19/65 (29.23%), Postives = 45/65 (69.23%), Query Frame = 1
BLAST of Spo07969.1 vs. ExPASy Swiss-Prot
Match: HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana GN=HIPP22 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.100e-6 Identity = 24/66 (36.36%), Postives = 42/66 (63.64%), Query Frame = 1
BLAST of Spo07969.1 vs. TAIR (Arabidopsis)
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 90.5 bits (223), Expect = 2.600e-18 Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 1
BLAST of Spo07969.1 vs. TAIR (Arabidopsis)
Match: AT3G06130.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 86.7 bits (213), Expect = 3.700e-17 Identity = 54/122 (44.26%), Postives = 74/122 (60.66%), Query Frame = 1
BLAST of Spo07969.1 vs. TAIR (Arabidopsis)
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 5.400e-16 Identity = 119/359 (33.15%), Postives = 150/359 (41.78%), Query Frame = 1
BLAST of Spo07969.1 vs. TAIR (Arabidopsis)
Match: AT3G05220.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 3.500e-15 Identity = 57/135 (42.22%), Postives = 76/135 (56.30%), Query Frame = 1
BLAST of Spo07969.1 vs. TAIR (Arabidopsis)
Match: AT5G37860.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 73.2 bits (178), Expect = 4.200e-13 Identity = 37/72 (51.39%), Postives = 51/72 (70.83%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo07969.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo07969.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo07969.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo07969.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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