Spo07988.1 (mRNA) | SpinachBase

Overview


Name	Spo07988.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Lipid transfer protein
Location	chr2 : 30893910 .. 30895843 (+)
Sequence length	1345

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACCAGATTCAACCCTCCAGTCAAAATCAAACCACATCACCCACGTCTTTGACTATCTCTTACGTGTCAACATCTAATTTGGCCTTACCAAACTCTTCCCACACAGCCACCCAACTTTATCACCCCTCCCCCTCAAAACCTCTTTTTTTTCATTTCAAAATTCCCAAGTGACTCTCATCATAACCATTCCCCCTCGTCCCGATTCTCCCGCGATCATCGCCACGCGTCCCTCCTTTTCTCCCCTTCCTATTTCTACCCCTCTCATTTCACTCCCACCAGTCCCCCACTCATACTCGCACTACTCCCTTCCTTTTACTGCCCTTTTCTCTCTCCTACTCTCTCTCTCTCTCTCTCTCTCTCTCCACCCTCAAATGGCAGCGATGAAGTTCTCCCTTCTAATGCTGGTGTTTTCCATGGCGGTTGTGGTGTTAGTGGGAGCCAAGAGTTCACCGGCACCGGTCGACTGCACAAGTGTAGTCCTTAGCATGTCAGACTGCTTGTCATACGTCACCAACGGTAGCACCGTGGATAAACCAGAAGGAAACTGCTGTAATGGGTTGAAAACTGTGCTTAAAACTAGCTCTGAGTGTCTATGTGAAGGTTTCAAGAGTAGTAGCCAATTCGGCGTCGTTTTGAATGTTTCTAAGGCTCTTGGTTTACCAAAAGCTTGCAAGGTTAATGTTGATCCCTCTACTACCACATGTGGATGTATGTTTCCTTTTCCCTCTTCTTATTCTTAATTTTTGTTTTTCCTTTTTCTTTTAATTAAATTGGGTACTTTCAATAATTTGATTTTCAACTCTTAATTGTTTTTGTAGTATCTGTTGCTCCAACTGGCGCTCCTTCTCCAGGTGTTTATCTTCTCCCGACGCTTGTACTTTATTTTTTCATTTTTGTTGTTAGATAATTCTGTTAAAGATCGATTACTTTCCCGTTGGAATTTGGTTTGCTTTATTTTAAGAAATGTGTATTTCGAGTTCTTTTTTATGTTTTATTTGTTTGTTTGCGATGGGTGAAACTGGGTTATTTGAAATTTCATCATCTTTGTTGGGATTCTTAATTTTTTTAACATGCATTTTTGAAATTGAGGGCCTTAAATTGAGAAAAGATGTAAAATGAATTTTGTATTTACATTGAAGTTTGTATGTTGCAAGGAATAGATGAAAAAAGGTTGTCTGAATTTTCAGCATTTAGGGTTATAGGGAAATTAATTATGCTTTTCAGATCGTTGTTTATCAACAATTCAATTAATCTTTTATGCCTTTCCATGTTGATTTGATTTATACCATAATTGCGTGATTCGTATCAATAATTCTTACTTGTATTACAGCTGGTGGTGTAGTTGCCCCGGCAGGTGCTCCATCAGGTTTTTCAATCGCCAACACCCCAGCAATGAGTCCTGAAGGCAACGTGGTGTCTCCTTCAATGTCTCCAACCAACACCGGTGCTGCCACTGCTACTGGCGTGTCAATGCAAATGCAGCTGATTGTTGTGGGATTAGCAGCAGTATTCTTCTCTAGTTTTTAATCATCAGACTAATTTTACATAGTACTAGTAGCCTATTTAAATTTTCAAGGGATCTTTGTTTGATCAATAGCTCATGTTTTACATTTCTTCACCCACATTTTTTTGACTGTGTTTTTATGCGGTGGGATTGATTGGCGTTTATTTTCTCAATGGCAGACTTTCTTTCCGTCTAGTCATTTATTTGTTGCTGATATTACTATCATGATTATTATTCGTTACCTGATTTAATTGGATCTTAAATCTTGATGTTATGGTTCATTTTGCGTCTATTTAGAATTGTTTGAAATCACTTGTTATGATGGATGCTAATCTGTTTAGAATTAGGATTTGGATTTCAGTTTTAGAACTAATGCAAATCAAATGTTATGATGCTGAAAAGGAATAGGCCCTAATTCAGTGGCATTCG

mRNA sequence

TAACCAGATTCAACCCTCCAGTCAAAATCAAACCACATCACCCACGTCTTTGACTATCTCTTACGTGTCAACATCTAATTTGGCCTTACCAAACTCTTCCCACACAGCCACCCAACTTTATCACCCCTCCCCCTCAAAACCTCTTTTTTTTCATTTCAAAATTCCCAAGTGACTCTCATCATAACCATTCCCCCTCGTCCCGATTCTCCCGCGATCATCGCCACGCGTCCCTCCTTTTCTCCCCTTCCTATTTCTACCCCTCTCATTTCACTCCCACCAGTCCCCCACTCATACTCGCACTACTCCCTTCCTTTTACTGCCCTTTTCTCTCTCCTACTCTCTCTCTCTCTCTCTCTCTCTCTCCACCCTCAAATGGCAGCGATGAAGTTCTCCCTTCTAATGCTGGTGTTTTCCATGGCGGTTGTGGTGTTAGTGGGAGCCAAGAGTTCACCGGCACCGGTCGACTGCACAAGTGTAGTCCTTAGCATGTCAGACTGCTTGTCATACGTCACCAACGGTAGCACCGTGGATAAACCAGAAGGAAACTGCTGTAATGGGTTGAAAACTGTGCTTAAAACTAGCTCTGAGTGTCTATGTGAAGGTTTCAAGAGTAGTAGCCAATTCGGCGTCGTTTTGAATGTTTCTAAGGCTCTTGGTTTACCAAAAGCTTGCAAGGTTAATGTTGATCCCTCTACTACCACATGTGGATTATCTGTTGCTCCAACTGGCGCTCCTTCTCCAGCTGGTGGTGTAGTTGCCCCGGCAGGTGCTCCATCAGGTTTTTCAATCGCCAACACCCCAGCAATGAGTCCTGAAGGCAACGTGGTGTCTCCTTCAATGTCTCCAACCAACACCGGTGCTGCCACTGCTACTGGCGTGTCAATGCAAATGCAGCTGATTGTTGTGGGATTAGCAGCAGTATTCTTCTCTAGTTTTTAATCATCAGACTAATTTTACATAGTACTAGTAGCCTATTTAAATTTTCAAGGGATCTTTGTTTGATCAATAGCTCATGTTTTACATTTCTTCACCCACATTTTTTTGACTGTGTTTTTATGCGGTGGGATTGATTGGCGTTTATTTTCTCAATGGCAGACTTTCTTTCCGTCTAGTCATTTATTTGTTGCTGATATTACTATCATGATTATTATTCGTTACCTGATTTAATTGGATCTTAAATCTTGATGTTATGGTTCATTTTGCGTCTATTTAGAATTGTTTGAAATCACTTGTTATGATGGATGCTAATCTGTTTAGAATTAGGATTTGGATTTCAGTTTTAGAACTAATGCAAATCAAATGTTATGATGCTGAAAAGGAATAGGCCCTAATTCAGTGGCATTCG

Coding sequence (CDS)

ATGGCAGCGATGAAGTTCTCCCTTCTAATGCTGGTGTTTTCCATGGCGGTTGTGGTGTTAGTGGGAGCCAAGAGTTCACCGGCACCGGTCGACTGCACAAGTGTAGTCCTTAGCATGTCAGACTGCTTGTCATACGTCACCAACGGTAGCACCGTGGATAAACCAGAAGGAAACTGCTGTAATGGGTTGAAAACTGTGCTTAAAACTAGCTCTGAGTGTCTATGTGAAGGTTTCAAGAGTAGTAGCCAATTCGGCGTCGTTTTGAATGTTTCTAAGGCTCTTGGTTTACCAAAAGCTTGCAAGGTTAATGTTGATCCCTCTACTACCACATGTGGATTATCTGTTGCTCCAACTGGCGCTCCTTCTCCAGCTGGTGGTGTAGTTGCCCCGGCAGGTGCTCCATCAGGTTTTTCAATCGCCAACACCCCAGCAATGAGTCCTGAAGGCAACGTGGTGTCTCCTTCAATGTCTCCAACCAACACCGGTGCTGCCACTGCTACTGGCGTGTCAATGCAAATGCAGCTGATTGTTGTGGGATTAGCAGCAGTATTCTTCTCTAGTTTTTAA

Protein sequence

MAAMKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGLAAVFFSSF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo07988	Spo07988	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo07988.1	Spo07988.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07988.1.exon.1	Spo07988.1.exon.1	exon
Spo07988.1.exon.2	Spo07988.1.exon.2	exon
Spo07988.1.exon.3	Spo07988.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07988.1.utr5p.1	Spo07988.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07988.1.CDS.1	Spo07988.1.CDS.1	CDS
Spo07988.1.CDS.2	Spo07988.1.CDS.2	CDS
Spo07988.1.CDS.3	Spo07988.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo07988.1.utr3p.1	Spo07988.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo07988.1 vs. NCBI nr
Match: gi|902178742|gb|KNA09214.1| (hypothetical protein SOVF_155650 [Spinacia oleracea])

HSP 1 Score: 347.8 bits (891), Expect = 1.200e-92
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


		  
Query: 1   MAAMKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCC 60
           MAAMKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCC
Sbjct: 1   MAAMKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCC 60

Query: 61  NGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGA 120
           NGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGA
Sbjct: 61  NGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGA 120

Query: 121 PSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGL 180
           PSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGL
Sbjct: 121 PSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGL 180

Query: 181 AAVFFSSF 189
           AAVFFSSF
Sbjct: 181 AAVFFSSF 188

[Close]

BLAST of Spo07988.1 vs. NCBI nr
Match: gi|731352309|ref|XP_010687478.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 218.8 bits (556), Expect = 8.200e-54
Identity = 123/183 (67.21%), Postives = 148/183 (80.87%), Query Frame = 1


		  
Query: 7   SLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGLKTV 66
           +LL++  ++A   L  AK SPAPVDCT+VVLSMSDCLSYVTNGSTV KPEGNCC+GLK+V
Sbjct: 6   ALLVVFIAVASAALTEAKDSPAPVDCTTVVLSMSDCLSYVTNGSTVQKPEGNCCSGLKSV 65

Query: 67  LKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSPAGG 126
           LKT++ECLCE FKSSSQFG+VL+VSKAL LP AC V+     + CGLS++PTGAPSPAG 
Sbjct: 66  LKTNAECLCEAFKSSSQFGIVLDVSKALALPDACHVH----ASKCGLSLSPTGAPSPAGV 125

Query: 127 VVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPT-NTGAATATGVSMQMQLIVVGLAAVFF 186
           VVAPAGAP+G  IAN P+M    NVVSP++SPT NTG+A+A G S   +L++ GLAA FF
Sbjct: 126 VVAPAGAPTGAPIANAPSMGAGSNVVSPALSPTGNTGSASAIGFS--AKLVIAGLAAAFF 182

Query: 187 SSF 189
           SSF
Sbjct: 186 SSF 182

[Close]

BLAST of Spo07988.1 vs. NCBI nr
Match: gi|743941452|ref|XP_011015215.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Populus euphratica])

HSP 1 Score: 146.4 bits (368), Expect = 5.200e-32
Identity = 81/166 (48.80%), Postives = 113/166 (68.07%), Query Frame = 1


		  
Query: 25  SSPAP--VDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGLKTVLKTSSECLCEGFKSSS 84
           S+PAP  VDC++++LSM+DCLS+V+N ST  KPEG CC GLKTVL T +ECLCE FKSS 
Sbjct: 32  SAPAPSSVDCSNLILSMADCLSFVSNDSTATKPEGKCCAGLKTVLSTKAECLCEAFKSSV 91

Query: 85  QFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSPAGGVVAPAGAPSGFSIANT 144
           Q+G+VLNV+KAL LP  CK++  P+ + CGLS++P+GAP+P G              A  
Sbjct: 92  QYGIVLNVTKALSLPSVCKIHAPPA-SNCGLSISPSGAPAPGGS-------------APG 151

Query: 145 PAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGLAAVFFSSF 189
           PA++  GN  +P+ SP ++G   +TG S+ +  +++G     FSSF
Sbjct: 152 PAVNGGGNEQAPAPSPGHSG---STGFSISVGSLIIGFVVASFSSF 180

[Close]

BLAST of Spo07988.1 vs. NCBI nr
Match: gi|1021576484|ref|XP_016179437.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Arachis ipaensis])

HSP 1 Score: 144.1 bits (362), Expect = 2.600e-31
Identity = 88/183 (48.09%), Postives = 118/183 (64.48%), Query Frame = 1


		  
Query: 3   AMKFSLLMLVFSMAVVVLVGAKSSPAP-VDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCN 62
           A K SL  ++  +   V+     SP+P VDC+++VL+M+DCLS+VTNGST  KPEG CC+
Sbjct: 2   AAKLSLSFIILCVVGAVMCDGARSPSPSVDCSNLVLTMADCLSFVTNGSTTTKPEGTCCS 61

Query: 63  GLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAP 122
           GLKTVLKT+ +CLCE FKSS QFGVVLNV+KAL LP AC ++   +T  CGLS AP  A 
Sbjct: 62  GLKTVLKTAPDCLCEAFKSSVQFGVVLNVTKALALPSACGLSASSATDYCGLSGAP--AA 121

Query: 123 SPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGLA 182
           SP GG V+P  +PS  S + T A S   N     +SP +  ++ + G S    +  +  A
Sbjct: 122 SPGGGRVSPGSSPSSASGSETTAPSWNNNGPINEVSPRSAPSSPSKGKSSASTMFPISPA 181

Query: 183 AVF 185
           ++F
Sbjct: 182 SLF 182

[Close]

BLAST of Spo07988.1 vs. NCBI nr
Match: gi|1002635128|gb|AMN14866.1| (putative lipid-transfer protein 1 [Nepenthes mirabilis])

HSP 1 Score: 143.3 bits (360), Expect = 4.400e-31
Identity = 98/194 (50.52%), Postives = 126/194 (64.95%), Query Frame = 1


		  
Query: 3   AMKFSLLML------VFSMAVVVLVGAKSSPAPV-DCTSVVLSMSDCLSYVTNGSTVDKP 62
           A+K SLL+L      V     V     + + AP  DC+++VL+M+DCLS+V NGST  KP
Sbjct: 2   ALKISLLVLALLGLWVSESGNVADAAHRGTAAPAADCSNLVLNMADCLSFVQNGSTATKP 61

Query: 63  EGNCCNGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLS- 122
           E +CC+GLKTVLKT +ECLCE FKSSSQFGVVLNV+KAL LP AC V   PS +TCGLS 
Sbjct: 62  EESCCSGLKTVLKTDAECLCEAFKSSSQFGVVLNVTKALSLPSACHVKT-PSFSTCGLSP 121

Query: 123 VAPTGAPSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQ 182
            +PTGAP     VVAP   PS  SIAN P+    GN V+P+ +P   G ++++   + M 
Sbjct: 122 TSPTGAP-----VVAPKSGPS-LSIANAPSEVMAGNEVAPAPAP---GKSSSSLPGISMG 181

Query: 183 LIVVGLAAVFFSSF 189
            ++  L AV FS +
Sbjct: 182 SVIAALIAVVFSYY 185

[Close]

BLAST of Spo07988.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QPM8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_155650 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 8.100e-93
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 1


		  
Query: 1   MAAMKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCC 60
           MAAMKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCC
Sbjct: 1   MAAMKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCC 60

Query: 61  NGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGA 120
           NGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGA
Sbjct: 61  NGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGA 120

Query: 121 PSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGL 180
           PSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGL
Sbjct: 121 PSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGL 180

Query: 181 AAVFFSSF 189
           AAVFFSSF
Sbjct: 181 AAVFFSSF 188

[Close]

BLAST of Spo07988.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BUN0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g190310 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.700e-54
Identity = 123/183 (67.21%), Postives = 148/183 (80.87%), Query Frame = 1


		  
Query: 7   SLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGLKTV 66
           +LL++  ++A   L  AK SPAPVDCT+VVLSMSDCLSYVTNGSTV KPEGNCC+GLK+V
Sbjct: 6   ALLVVFIAVASAALTEAKDSPAPVDCTTVVLSMSDCLSYVTNGSTVQKPEGNCCSGLKSV 65

Query: 67  LKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSPAGG 126
           LKT++ECLCE FKSSSQFG+VL+VSKAL LP AC V+     + CGLS++PTGAPSPAG 
Sbjct: 66  LKTNAECLCEAFKSSSQFGIVLDVSKALALPDACHVH----ASKCGLSLSPTGAPSPAGV 125

Query: 127 VVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPT-NTGAATATGVSMQMQLIVVGLAAVFF 186
           VVAPAGAP+G  IAN P+M    NVVSP++SPT NTG+A+A G S   +L++ GLAA FF
Sbjct: 126 VVAPAGAPTGAPIANAPSMGAGSNVVSPALSPTGNTGSASAIGFS--AKLVIAGLAAAFF 182

Query: 187 SSF 189
           SSF
Sbjct: 186 SSF 182

[Close]

BLAST of Spo07988.1 vs. UniProtKB/TrEMBL
Match: A0A140GMM8_NEPMI (Putative lipid-transfer protein 1 OS=Nepenthes mirabilis GN=LTP1 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.000e-31
Identity = 98/194 (50.52%), Postives = 126/194 (64.95%), Query Frame = 1


		  
Query: 3   AMKFSLLML------VFSMAVVVLVGAKSSPAPV-DCTSVVLSMSDCLSYVTNGSTVDKP 62
           A+K SLL+L      V     V     + + AP  DC+++VL+M+DCLS+V NGST  KP
Sbjct: 2   ALKISLLVLALLGLWVSESGNVADAAHRGTAAPAADCSNLVLNMADCLSFVQNGSTATKP 61

Query: 63  EGNCCNGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLS- 122
           E +CC+GLKTVLKT +ECLCE FKSSSQFGVVLNV+KAL LP AC V   PS +TCGLS 
Sbjct: 62  EESCCSGLKTVLKTDAECLCEAFKSSSQFGVVLNVTKALSLPSACHVKT-PSFSTCGLSP 121

Query: 123 VAPTGAPSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQ 182
            +PTGAP     VVAP   PS  SIAN P+    GN V+P+ +P   G ++++   + M 
Sbjct: 122 TSPTGAP-----VVAPKSGPS-LSIANAPSEVMAGNEVAPAPAP---GKSSSSLPGISMG 181

Query: 183 LIVVGLAAVFFSSF 189
            ++  L AV FS +
Sbjct: 182 SVIAALIAVVFSYY 185

[Close]

BLAST of Spo07988.1 vs. UniProtKB/TrEMBL
Match: V7CPA3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G207400g PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.200e-30
Identity = 93/190 (48.95%), Postives = 125/190 (65.79%), Query Frame = 1


		  
Query: 3   AMKFSLLMLVFSMAVVVLVGAKSSP-AP---VDCTSVVLSMSDCLSYVTNGSTVDKPEGN 62
           A K S+++ V ++  + L  + SSP AP   VDC++++L+M+DCLS+VTNGSTV KPEG 
Sbjct: 2   ASKLSIILCVMALCAIDLAQSASSPQAPAPSVDCSNLILTMADCLSFVTNGSTVTKPEGT 61

Query: 63  CCNGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPT 122
           CC+GLK+VLKT+  CLCE FKSS+QFGVVLNV+KA  LP ACKV+  PS T CGLS AP 
Sbjct: 62  CCSGLKSVLKTAPACLCEAFKSSAQFGVVLNVTKATSLPAACKVSA-PSATNCGLSEAP- 121

Query: 123 GAPSPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVV 182
            A +PAGG    A      S A++  ++   + VSP+ +P    AA+A   +    L+ V
Sbjct: 122 -AAAPAGGESPQASPSPKASGASSSGINGPASEVSPAPAPAKGNAASALFPTSAGSLL-V 181

Query: 183 GLAAVFFSSF 189
           G+    FS F
Sbjct: 182 GILVATFSGF 187

[Close]

BLAST of Spo07988.1 vs. UniProtKB/TrEMBL
Match: A0A151T235_CAJCA (Non-specific lipid-transfer protein-like protein At5g64080 family OS=Cajanus cajan GN=KK1_023556 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.400e-30
Identity = 97/189 (51.32%), Postives = 124/189 (65.61%), Query Frame = 1


		  
Query: 1   MAAMKFSLLMLVFSMAVVVLVGAKSSP-AP---VDCTSVVLSMSDCLSYVTNGSTVDKPE 60
           MAA K SL++ V ++  VV   A SSP AP   VDC+++VL+M+DCLS+VTNGSTV KPE
Sbjct: 1   MAATKLSLILCVLALWGVVPSDAASSPHAPAPSVDCSNIVLTMADCLSFVTNGSTVTKPE 60

Query: 61  GNCCNGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVA 120
           G CC+GLK+VLKT+  CLCE FKSS+QFGVVLNV+KA  LP ACKV + PS T C LS A
Sbjct: 61  GTCCSGLKSVLKTAPACLCEAFKSSAQFGVVLNVTKATTLPAACKV-IAPSATNCLLSEA 120

Query: 121 PTGAPSPAGGVVAPAGAPS-GFSIANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQL 180
           P  AP+     ++P   PS   S A+TP ++   N VSP  +P     A+A+       L
Sbjct: 121 PAAAPAVG---LSPQTTPSPQSSDASTPGLNGPVNEVSPVPAPAQGNTASASFPFSAGSL 180

Query: 181 IVVGLAAVF 185
           +V  + A F
Sbjct: 181 LVCIMVAAF 185

[Close]

BLAST of Spo07988.1 vs. ExPASy Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.400e-29
Identity = 77/156 (49.36%), Postives = 110/156 (70.51%), Query Frame = 1


		  
Query: 9   LMLVFSMAVVVLVGAK----SSPAP-VDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGL 68
           L+++ S++ V ++GA     ++PAP VDC++++L+M+DCLS+V++G TV KPEG CC+GL
Sbjct: 15  LIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGL 74

Query: 69  KTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSP 128
           KTVLK  S+CLCE FKSS+  GV LN++KA  LP ACK++  PS  TCGLSVAP+ AP  
Sbjct: 75  KTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHA-PSIATCGLSVAPSTAPGL 134

Query: 129 AGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPT 160
           A GV A     +GF +A  P+   +G+ + P+   T
Sbjct: 135 APGVAAAGPETAGF-LAPNPSSGNDGSSLIPTSFTT 168

[Close]

BLAST of Spo07988.1 vs. ExPASy Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.200e-27
Identity = 74/161 (45.96%), Postives = 105/161 (65.22%), Query Frame = 1


		  
Query: 4   MKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGL 63
           M ++ ++++FS  VV L+  + + A VDC+S++L+M+DCLS+VT+GSTV KPEG CC+GL
Sbjct: 1   MAYATILMIFS--VVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGL 60

Query: 64  KTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSP 123
           KTV++T  ECLCE FK+S   G+ L++SKA  LP  CKV   PS   CGLSV+    P+ 
Sbjct: 61  KTVVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPS-ARCGLSVS-GDPPAT 120

Query: 124 AGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAA 165
           A G+   AG       A  PA+S   N  +P  SP ++ A+
Sbjct: 121 APGLSPTAG-------AGAPALSSGANAATPVSSPRSSDAS 150

[Close]

BLAST of Spo07988.1 vs. TAIR (Arabidopsis)
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 7.900e-31
Identity = 77/156 (49.36%), Postives = 110/156 (70.51%), Query Frame = 1


		  
Query: 9   LMLVFSMAVVVLVGAK----SSPAP-VDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGL 68
           L+++ S++ V ++GA     ++PAP VDC++++L+M+DCLS+V++G TV KPEG CC+GL
Sbjct: 15  LIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGL 74

Query: 69  KTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSP 128
           KTVLK  S+CLCE FKSS+  GV LN++KA  LP ACK++  PS  TCGLSVAP+ AP  
Sbjct: 75  KTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHA-PSIATCGLSVAPSTAPGL 134

Query: 129 AGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPT 160
           A GV A     +GF +A  P+   +G+ + P+   T
Sbjct: 135 APGVAAAGPETAGF-LAPNPSSGNDGSSLIPTSFTT 168

[Close]

BLAST of Spo07988.1 vs. TAIR (Arabidopsis)
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.300e-28
Identity = 74/161 (45.96%), Postives = 105/161 (65.22%), Query Frame = 1


		  
Query: 4   MKFSLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGL 63
           M ++ ++++FS  VV L+  + + A VDC+S++L+M+DCLS+VT+GSTV KPEG CC+GL
Sbjct: 1   MAYATILMIFS--VVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGL 60

Query: 64  KTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSP 123
           KTV++T  ECLCE FK+S   G+ L++SKA  LP  CKV   PS   CGLSV+    P+ 
Sbjct: 61  KTVVRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPS-ARCGLSVS-GDPPAT 120

Query: 124 AGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSPTNTGAA 165
           A G+   AG       A  PA+S   N  +P  SP ++ A+
Sbjct: 121 APGLSPTAG-------AGAPALSSGANAATPVSSPRSSDAS 150

[Close]

BLAST of Spo07988.1 vs. TAIR (Arabidopsis)
Match: AT4G08670.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.400e-19
Identity = 65/166 (39.16%), Postives = 96/166 (57.83%), Query Frame = 1


		  
Query: 21  VGAKS-SPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGLKTVLKTSSECLCEGFK 80
           VGA +  P+  DC++V+ SM DCL Y+  GS   KPE +CC G++TVL+ + +C+C G  
Sbjct: 36  VGAPAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLV 95

Query: 81  SSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSPAGGVVAP-AGAPSGFS 140
           S+ + G+ LN ++AL  PKACK+++ P    CG  +  +GA +P    V+P AGAP   +
Sbjct: 96  SAGEMGIELNSTRALATPKACKLSIAP--PHCG--IITSGATTPGASPVSPSAGAP---T 155

Query: 141 IANTPAMSPEGNVVSPSMSPTNTGAATATGVSMQMQLIVVGLAAVF 185
            + + A SPE +  SPS   T +  A +   S    L V  L  VF
Sbjct: 156 TSPSAAKSPETSATSPSSDETPSMTAPSPSSSGTNILSVPALTIVF 194

[Close]

BLAST of Spo07988.1 vs. TAIR (Arabidopsis)
Match: AT1G36150.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.800e-17
Identity = 65/162 (40.12%), Postives = 89/162 (54.94%), Query Frame = 1


		  
Query: 8   LLMLVFSMAVVVLVGAKSSP---APV-------DCTSVVLSMSDCLSYVTNGSTVDKPEG 67
           +L+L  S++     G+ S P   AP        DC+SV+ SM DCLS++T GST   P  
Sbjct: 11  VLLLSSSLSDAADFGSPSQPPSMAPTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTK 70

Query: 68  NCCNGLKTVLKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAP 127
            CC G+KTVL  S +CLC   +SS + G VL+ +KAL +PK C V +DP+   C +S   
Sbjct: 71  TCCVGVKTVLNYSPKCLCSALESSREMGFVLDDTKALAMPKICNVPIDPN---CDVSTPA 130

Query: 128 TGAP-SPAGGVVAPAGAPSGFSIANTPAMSPEGNVVSPSMSP 159
              P SP   V +P  +PS    A +PA++P    VS S  P
Sbjct: 131 ASTPVSPP--VESPTTSPSS---AKSPAITPSSPAVSHSPPP 164

[Close]

BLAST of Spo07988.1 vs. TAIR (Arabidopsis)
Match: AT5G09370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.500e-13
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 1


		  
Query: 7   SLLMLVFSMAVVVLVGAKSSPAPVDCTSVVLSMSDCLSYVTNGSTVDKPEGNCCNGLKTV 66
           SLL+LV S++   + GA       DC ++V+++  CL +++ G T D P  +CC+ LK +
Sbjct: 9   SLLLLVLSVSSPYVHGAS------DCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNI 68

Query: 67  LKTSSECLCEGFKSSSQFGVVLNVSKALGLPKACKVNVDPSTTTCGLSVAPTGAPSPAGG 126
           L T   CLCEG K +   G+ LNV+K+  LP ACK+N  P +    L   P  +P  A G
Sbjct: 69  LDTKPICLCEGLKKAP-LGIKLNVTKSATLPVACKLNAPPVSACDSL---PPASPPTANG 128

Query: 127 VVAPAGAPSGFSIANTPAMSPEGNVVSP 155
                G  SG++ A +P+   +GN + P
Sbjct: 129 QAPVWG--SGWAPAPSPS---KGNSLIP 141

The following BLAST results are available for this feature:

BLAST of Spo07988.1 vs. NCBI nr
BLAST of Spo07988.1 vs. UniProtKB/TrEMBL
BLAST of Spo07988.1 vs. ExPASy Swiss-Prot
BLAST of Spo07988.1 vs. TAIR (Arabidopsis)

BLAST of Spo07988.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902178742\|gb\|KNA09214.1\|	1.2e-92	100.	hypothetical protein SOVF_1556...	[more]
gi\|731352309\|ref\|XP_010687478.1\|	8.2e-54	67.2	PREDICTED: non-specific lipid-...	[more]
gi\|743941452\|ref\|XP_011015215.1\|	5.2e-32	48.8	PREDICTED: non-specific lipid-...	[more]
gi\|1021576484\|ref\|XP_016179437.1\|	2.6e-31	48.0	PREDICTED: non-specific lipid-...	[more]
gi\|1002635128\|gb\|AMN14866.1\|	4.4e-31	50.5	putative lipid-transfer protei...	[more]

BLAST of Spo07988.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QPM8_SPIOL	8.1e-93	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BUN0_BETVU	5.7e-54	67.2	Uncharacterized protein OS=Bet...	[more]
A0A140GMM8_NEPMI	3.0e-31	50.5	Putative lipid-transfer protei...	[more]
V7CPA3_PHAVU	1.2e-30	48.9	Uncharacterized protein OS=Pha...	[more]
A0A151T235_CAJCA	3.4e-30	51.3	Non-specific lipid-transfer pr...	[more]

BLAST of Spo07988.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
NLTL5_ARATH	1.4e-29	49.3	Non-specific lipid-transfer pr...	[more]
NLTL2_ARATH	2.2e-27	45.9	Non-specific lipid-transfer pr...	[more]

BLAST of Spo07988.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G64080.1	7.9e-31	49.3	Bifunctional inhibitor/lipid-t...	[more]
AT2G13820.1	1.3e-28	45.9	Bifunctional inhibitor/lipid-t...	[more]
AT4G08670.1	1.4e-19	39.1	Bifunctional inhibitor/lipid-t...	[more]
AT1G36150.1	3.8e-17	40.1	Bifunctional inhibitor/lipid-t...	[more]
AT5G09370.1	1.5e-13	36.4	Bifunctional inhibitor/lipid-t...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 31..47 score: 3.9E-8coord: 54..68 score: 3.9E-8coord: 87..104 score: 3.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 15..111 score: 2.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 32..111 score: 4.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 30..108 score: 7.85
None	No IPR available	GENE3D	1.10.110.10		coord: 30..109 score: 2.2
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 1..185 score: 2.2
None	No IPR available	PANTHER	PTHR33044:SF27	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 1..185 score: 2.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0008289	lipid binding