Spo08065.1 (mRNA) | SpinachBase

Overview


Name	Spo08065.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Single-stranded DNA-binding protein
Location	chr5 : 13691841 .. 13695871 (-)
Sequence length	1344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTAGGGTTTTACTCAGGTTTAAGCCCCAAAACCTTGCAATTCTCTCTCCCTCTCTCTGATCAAACTCTCCATCAATGGCTACCTCAAACTCAATGGCAGCAATTTCAAGAAGACTATATCGAAATCTCATCTCAAATAAAAAACCCTCTTGTTATCTTAATCACACTACCAATTCCTTCTTCTCCACTGGACCTTCAATTCCAGACGACAACTTGGATAAATTGCTAGACGAGTTACCAACTCTCGACTCGGACACTGAATCGACCGAGTTACCCCCTGATAACTCCACCGCTTCCTCCTCTGAGTTCTCCTCAACTTCCCCCAAATCGGCAGGACACCGTGCCTACAATCAGACGGTCCTTGAAGGTGGCTTAGACATCGGCATTTACAAGGTTCGTACATTTTAGTAAACAATTTATGGTCATGTACAAGTACTGGTCTCGAGTCGAGCCTTATTGGATATATGCTGTTTGAACATAGTAATTTAATGGAAATGGGTTGTTGTTGTTGAGATATTAGCAATTGTTTGATTGTTAATTGTGGAGATCTAAGTTGCTGGATTTGTCGAAAACTGCAAATATATGTGTGAGAATGTAAGATTGGAGGTTTTATGTGTGTTAATTGGATGATTAATTGAGTGCCAATTTCTGGAATTAGGCTATATTGGTTGGACAAGTAGGGCAGAGTCCTATGCAGAAGAGGCTGAAGAATGGGAAATTGATGACGCTTACTACTGTAGGAACGGGTGGGATTAGGAATGAGCGGATTCCATTTCCTAATGAAGAGCCGAGGGAGTATGCTGATCGTTGTAATGTTCAATGGCATCGGGTTGCTATCTATCCAGAACACTTGGGTGATGTTGTAATGAAGAATGCTCCACCTGGGTAACCTCCTTTTCTTGATCTCTATATCCTATTGTAGTGTTTACTAGTCATTTTGTCTGCTTGGTTGTGAATGATGAAACTTCTTAGTTCTTTTCTTCGGATAAGTTGTGTGTTAAGTCTTTAGCATGGTTGAACTTTTTTTGGGTTTTGCTGGTATTTTATGAGGGAGCGGAGTAAAGAATTTAGCTTTACGGTCATCAAACATTGAAATGAACTTCAATGTTTGTTTTCGAATGAGAACCAATGTGTGCTTAAATGAGAGTGTTCTAGATTTTTCCGGCATTCAACTACGGAGTATAAGAAATCAATTGTTGATTGCAGTGCAACATTTGTTCGTGTGGCTTTATCTAGCCTGAAAGTGTCCTGTAAAGGGGATTCATTCTGAGGTGCCAACATTTCATCCAAGCGTATTAAACCTTGAATTTCTAAATATATTAGAGTAAGATGTATAGAACTGCTAACCATACATAACATATGAAGAGTATATTCATCTTTTAATGCCCATACAGACTCGTTATTGAGTAGATCCTTAACCAATTAAAATAAATTACTTTCTACAACAAATTCGTTATGTCCTAACAAGTAAAAACAGGCATGAAGAATACCAAATTTGTAATCAACATTAAAATTATCAATTCTTGTCAACTATCTTGTTATCCTTGTCCATGTAATTATATTTTCCCTGTTACAAATTTCATTCTGCTGCACATCATATCAAAGCAGAGAAAGAAGGTTGCAAGAAGGTTTCATATAAGAACAATCATTCTGGTCCATCAGCCCCATCTTTGTGCTAATGATATGTATTCTTTATATCCATCCGCCTGTATAAGACCATTAAGGCATCAATTGGTACAAGCGTGCAACTAAATGAGTCATGGAGCGCATTGTCCATTTTGTCGGGCAACTCATCGTTTTGTGGAAGATTTTGTCCTTTGAAAGAATTACATCTATGTTAGTTTTCTGTGGAGTATTGTAAAGATGACATTAAGTCTAAGTCTTACCATTACAATTATCATTACCTCAGTGGGTATGTCAGATGATAATATGATATACACATTTCTTTTGATGGGCATATATTCACATTCTTTTTTTTTTGTCAATTAGATATACATACTCTTAACTCTATAATAAGACGAGTTTCTCTTTGGATCCTTGGTTTCTGAGGAGATTCACTGTCCCAATCCACAACCAAAAGAACGGTTAGGATCTTAGAATAGGTCGATAATACTTTTGATTTAGTCAGTTAGTCCACTACTATGCTTCCTGGACACAACAAAATTGCTCAGTACTCATCTTGTTACAACAAGGCATAACACCATTATGGGTATGAAATCTGGATCAGAATTTTCATTCAGTTAGACACGGATGGTAGGCCCTGTATGTCTGAATTAGCCACAAATTGAGGGGAGAAACCGGGAAGGAGGGGAAGAAAATTAGAGGGAGAGATCTGATTTGGATGCTGAGAATAGGGGTAGAGGAGACATCGATGGCCTGTTGGTTTTTCTGTGCTAGTAGTTGATGATGAGAGAGGAGGAAGATGACAGCCGAGGCCAATAGATGCTCAATTCATTTTTGCTCAGTTTCTCTCTTTTGTGCCATTCTTTTCTCTTTCGTCTTAACTCTTCCTGTTGCTTACATAGTTACACCCTAGAGTTTGGTATGTGTGACTAATATCTCTCTCTACACAAATACTCACATAGTCACATACACATACAATATGCTACCATATGTCTGAACTCTGAACAGAGTCCCCATGTCCTAAATTTTTTGTTACTGGACCCTTGGACACTTACCCATATCCAACACCCATGCCTAATGTTGAACAGATGCTTTGTTCCTTGACAAAGTTTGCTTCCCTATCTGAACTGGGTGGATTACTGTCTATTCTGTAATTATGAATTTGTGATGGCCTTTGGAGCTGCGTTTAGAATGTATTTGCTACTGTTGTATACTTCGTATATGTTTTATAATTTAGTGATATCCATGTTGCCAGTTTACTTTCTAGTGGTTATCATTATATCAACAATCATTAGAAGTATGTTTTTTTTTTTTTGAAAAAAATTTGGTTGTTGCTTTGACCTGTGGAAATCTTATCTTGTGATATTTTCTTACAAATAATATGCAATGCTTGGTTCTTGATGCAGTACAATACTTTATCTGGAGGGAAATCTGGAGACAAAAATCTTTACTGATCAAAATACAGGTCTTGTTAAGCGAATGAGGGAAATCGCGATTCGGCGAAATGGTATGTTTTTACTAGAATTACTACTATTACATTTATGATAATGACATAATATAAAAAAATTAGAGTGCTTCTGTTGTTGATATTTATCAAAATTTAATGTTCTAAACGTAACGTATTGGATCACTTGCCCCTGCATTTTGTTGGTCGTCTCTGAATATGATTGCCTGGCACTGAATGTATCCTGCAGAAGAGGCAGTGCTATGTTGATGCGTGTGATGTGTAGTGTGGCCGTGTGGGTGTGCTTATAAGTATATATTTGTATTATTTGGTTATTGCAGGGCGTGTTGTGTTTTTGGGAAATGGTGGTGATTTCAGTCAGCCATCTGCACATGAGCTCAAAGGTGTTGGCTATTTCTGAATCCCGAAGGACATCACTGTTCATTTCTCTCAGGCACATGATTCATGATTGGATCAGTCTTCAAGTCGACCTCAAAGGACCAGTGCTCATGTTTTCAAGCATCAATATGTAGGCCGCAAATCGGATTGCCAATATGCCATTTACAATAATCTAACAGAGACAGAGAGTTGTGCCTTAGAAACGTGAAGGATAGTAGCTTGTGTACAGCCTGTTTTCCGATTGCAAGTTCATTGATGGTACTTCCCTAACAAAGAATTACAGTAGATTTTGTTTTTTTGGTTGAGTTGGAAAGCACAAGTAGAGTTTGAAGTTGCAAACGTTGGTGTTGTTACTGCTATCATATGAGATATGACGGAAAATAAGTTGTTGAATAGACCTAAACATTTTTTAAAATAGGAAAGCTGACTGCCAAAAGGCCCAAAAGGCATTAACTGGAGTCGGGCTCTTTGGTCGGAAAATATTAAAATGTTTATATAAAAATTACTAAATGAATGATTTTGCTATGGCTACATTTAAATTGTAGCCATGGTAACTATCTCCGAT

mRNA sequence

CCTAGGGTTTTACTCAGGTTTAAGCCCCAAAACCTTGCAATTCTCTCTCCCTCTCTCTGATCAAACTCTCCATCAATGGCTACCTCAAACTCAATGGCAGCAATTTCAAGAAGACTATATCGAAATCTCATCTCAAATAAAAAACCCTCTTGTTATCTTAATCACACTACCAATTCCTTCTTCTCCACTGGACCTTCAATTCCAGACGACAACTTGGATAAATTGCTAGACGAGTTACCAACTCTCGACTCGGACACTGAATCGACCGAGTTACCCCCTGATAACTCCACCGCTTCCTCCTCTGAGTTCTCCTCAACTTCCCCCAAATCGGCAGGACACCGTGCCTACAATCAGACGGTCCTTGAAGGTGGCTTAGACATCGGCATTTACAAGGCTATATTGGTTGGACAAGTAGGGCAGAGTCCTATGCAGAAGAGGCTGAAGAATGGGAAATTGATGACGCTTACTACTGTAGGAACGGGTGGGATTAGGAATGAGCGGATTCCATTTCCTAATGAAGAGCCGAGGGAGTATGCTGATCGTTGTAATGTTCAATGGCATCGGGTTGCTATCTATCCAGAACACTTGGGTGATGTTGTAATGAAGAATGCTCCACCTGGTACAATACTTTATCTGGAGGGAAATCTGGAGACAAAAATCTTTACTGATCAAAATACAGGTCTTGTTAAGCGAATGAGGGAAATCGCGATTCGGCGAAATGGGCGTGTTGTGTTTTTGGGAAATGGTGGTGATTTCAGTCAGCCATCTGCACATGAGCTCAAAGGTGTTGGCTATTTCTGAATCCCGAAGGACATCACTGTTCATTTCTCTCAGGCACATGATTCATGATTGGATCAGTCTTCAAGTCGACCTCAAAGGACCAGTGCTCATGTTTTCAAGCATCAATATGTAGGCCGCAAATCGGATTGCCAATATGCCATTTACAATAATCTAACAGAGACAGAGAGTTGTGCCTTAGAAACGTGAAGGATAGTAGCTTGTGTACAGCCTGTTTTCCGATTGCAAGTTCATTGATGGTACTTCCCTAACAAAGAATTACAGTAGATTTTGTTTTTTTGGTTGAGTTGGAAAGCACAAGTAGAGTTTGAAGTTGCAAACGTTGGTGTTGTTACTGCTATCATATGAGATATGACGGAAAATAAGTTGTTGAATAGACCTAAACATTTTTTAAAATAGGAAAGCTGACTGCCAAAAGGCCCAAAAGGCATTAACTGGAGTCGGGCTCTTTGGTCGGAAAATATTAAAATGTTTATATAAAAATTACTAAATGAATGATTTTGCTATGGCTACATTTAAATTGTAGCCATGGTAACTATCTCCGAT

Coding sequence (CDS)

ATGGCTACCTCAAACTCAATGGCAGCAATTTCAAGAAGACTATATCGAAATCTCATCTCAAATAAAAAACCCTCTTGTTATCTTAATCACACTACCAATTCCTTCTTCTCCACTGGACCTTCAATTCCAGACGACAACTTGGATAAATTGCTAGACGAGTTACCAACTCTCGACTCGGACACTGAATCGACCGAGTTACCCCCTGATAACTCCACCGCTTCCTCCTCTGAGTTCTCCTCAACTTCCCCCAAATCGGCAGGACACCGTGCCTACAATCAGACGGTCCTTGAAGGTGGCTTAGACATCGGCATTTACAAGGCTATATTGGTTGGACAAGTAGGGCAGAGTCCTATGCAGAAGAGGCTGAAGAATGGGAAATTGATGACGCTTACTACTGTAGGAACGGGTGGGATTAGGAATGAGCGGATTCCATTTCCTAATGAAGAGCCGAGGGAGTATGCTGATCGTTGTAATGTTCAATGGCATCGGGTTGCTATCTATCCAGAACACTTGGGTGATGTTGTAATGAAGAATGCTCCACCTGGTACAATACTTTATCTGGAGGGAAATCTGGAGACAAAAATCTTTACTGATCAAAATACAGGTCTTGTTAAGCGAATGAGGGAAATCGCGATTCGGCGAAATGGGCGTGTTGTGTTTTTGGGAAATGGTGGTGATTTCAGTCAGCCATCTGCACATGAGCTCAAAGGTGTTGGCTATTTCTGA

Protein sequence

MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSDTESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQKRLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAPPGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGYF

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08065	Spo08065	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08065.1	Spo08065.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08065.1.utr5p.1	Spo08065.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08065.1.CDS.4	Spo08065.1.CDS.4	CDS
Spo08065.1.CDS.3	Spo08065.1.CDS.3	CDS
Spo08065.1.CDS.2	Spo08065.1.CDS.2	CDS
Spo08065.1.CDS.1	Spo08065.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08065.1.utr3p.1	Spo08065.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08065.1.exon.4	Spo08065.1.exon.4	exon
Spo08065.1.exon.3	Spo08065.1.exon.3	exon
Spo08065.1.exon.2	Spo08065.1.exon.2	exon
Spo08065.1.exon.1	Spo08065.1.exon.1	exon

Homology

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BLAST of Spo08065.1 vs. NCBI nr
Match: gi|902152158|gb|KNA05586.1| (hypothetical protein SOVF_188820 [Spinacia oleracea])

HSP 1 Score: 484.2 bits (1245), Expect = 1.300e-133
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


		  
Query: 1   MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSD 60
           MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSD
Sbjct: 1   MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSD 60

Query: 61  TESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQK 120
           TESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQK
Sbjct: 61  TESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQK 120

Query: 121 RLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAP 180
           RLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAP
Sbjct: 121 RLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAP 180

Query: 181 PGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGY 240
           PGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGY
Sbjct: 181 PGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGY 240

Query: 241 F 242
           F
Sbjct: 241 F 241

[Close]

BLAST of Spo08065.1 vs. NCBI nr
Match: gi|731367438|ref|XP_010695611.1| (PREDICTED: single-stranded DNA-binding protein, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 334.3 bits (856), Expect = 1.700e-88
Identity = 170/241 (70.54%), Postives = 201/241 (83.40%), Query Frame = 1


		  
Query: 1   MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSD 60
           MA+SNS+AAISRRLYRNL+SN K   +   ++ SFFST P  PD   D LLDELPTL+S+
Sbjct: 1   MASSNSLAAISRRLYRNLLSNSKNPYFHQQSSKSFFSTEPLTPDS--DTLLDELPTLNSE 60

Query: 61  TESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQK 120
           +E+ E   DNS ASSS+  ST P+S   RA ++  LEGGLDIGIYKAILVGQVGQ P+QK
Sbjct: 61  SETNESTHDNSAASSSDSFSTPPESPVRRAASEFSLEGGLDIGIYKAILVGQVGQIPVQK 120

Query: 121 RLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAP 180
           RLKNG ++TLTT+GTGGI+NER+PFPNEEPREYADRCNVQWHRVAIYPE LG++VMK+A 
Sbjct: 121 RLKNGMVVTLTTLGTGGIKNERVPFPNEEPREYADRCNVQWHRVAIYPEKLGEIVMKHAQ 180

Query: 181 PGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGY 240
           PG++LYLEGNLE KIFT+  TGL+KR+REIA+RR+GRVVFLGN  DF+QPS  ELKGVGY
Sbjct: 181 PGSLLYLEGNLERKIFTEPLTGLLKRVREIAVRRDGRVVFLGNSSDFNQPSRDELKGVGY 239

Query: 241 F 242
           F
Sbjct: 241 F 239

[Close]

BLAST of Spo08065.1 vs. NCBI nr
Match: gi|567197507|ref|XP_006406590.1| (hypothetical protein EUTSA_v10021489mg [Eutrema salsugineum])

HSP 1 Score: 244.6 bits (623), Expect = 1.800e-61
Identity = 137/239 (57.32%), Postives = 171/239 (71.55%), Query Frame = 1


		  
Query: 4   SNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSDTES 63
           +NSMA +SRRLYR+L+SN +     + ++ SF S   SI  D     LDEL + +SDTES
Sbjct: 2   ANSMATLSRRLYRSLLSNPR----FSQSSMSFCSN--SISSD-----LDEL-SANSDTES 61

Query: 64  TELPPDNSTASSSEFSSTSPKSAGH-RAYNQTVLEGGLDIGIYKAILVGQVGQSPMQKRL 123
                       S++S    + +G  R   +  LE GLD GIYKAILVGQVGQ P+QK+L
Sbjct: 62  P---------LESKYSDPMSRVSGEERVMEEHPLENGLDAGIYKAILVGQVGQLPLQKKL 121

Query: 124 KNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAPPG 183
           K+G+ +TL +VGTGGIRN R P  NE+PREYA+R  VQWHRV++YPE L D+V+KN  PG
Sbjct: 122 KSGRTVTLFSVGTGGIRNNRRPMINEDPREYANRSAVQWHRVSVYPERLADLVLKNVEPG 181

Query: 184 TILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGYF 242
           TI+YLEGNLETKIFTD  TGLV+R+RE+AIRRNGRVVFLG  GD  QPS+ EL+GVGY+
Sbjct: 182 TIVYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSSELRGVGYY 219

[Close]

BLAST of Spo08065.1 vs. NCBI nr
Match: gi|674926664|emb|CDY06744.1| (BnaA10g05230D [Brassica napus])

HSP 1 Score: 243.4 bits (620), Expect = 4.000e-61
Identity = 134/238 (56.30%), Postives = 166/238 (69.75%), Query Frame = 1


		  
Query: 4   SNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSDTES 63
           +NSMA +SRRLYR+L+SN +            FS  P     N +  +DEL +  SDTES
Sbjct: 2   ANSMATLSRRLYRSLLSNPR------------FSQSPRSLCTNNN--VDELSSSISDTES 61

Query: 64  TELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQKRLK 123
              P  N++  +  FS         R   +  LE GLD GI+KAILVGQVGQ P+QK+LK
Sbjct: 62  PHQP--NASDRNHRFSGED------RVMEERPLENGLDAGIFKAILVGQVGQLPLQKKLK 121

Query: 124 NGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAPPGT 183
           +G+ +TL +VGTGGIRN R P  NE+PREYA+R  VQWHRV++YPE L D+V+KN  PGT
Sbjct: 122 SGRTVTLFSVGTGGIRNNRRPLINEDPREYANRSAVQWHRVSVYPERLADLVLKNVEPGT 181

Query: 184 ILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGYF 242
           I+YLEGNLETKIFTD  TGLV+R+RE+AIRRNGRVVFLG  GD  QPS+ EL+GVGY+
Sbjct: 182 IVYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSSELRGVGYY 217

[Close]

BLAST of Spo08065.1 vs. NCBI nr
Match: gi|922412521|ref|XP_013639035.1| (PREDICTED: single-stranded DNA-binding protein, mitochondrial-like [Brassica oleracea var. oleracea])

HSP 1 Score: 243.0 bits (619), Expect = 5.200e-61
Identity = 134/238 (56.30%), Postives = 165/238 (69.33%), Query Frame = 1


		  
Query: 4   SNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSDTES 63
           +NSMA +SRRLYR+L+SN +            FS  P     N +  +DEL +  SDTES
Sbjct: 2   ANSMATLSRRLYRSLLSNPR------------FSQSPRSLCTNNN--VDELSSSISDTES 61

Query: 64  TELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQKRLK 123
              P  N++  +  FS         R   +  LE GLD GI+KAILVGQVGQ P+QK+LK
Sbjct: 62  PHQP--NASDRNHRFSGED------RVMEERPLENGLDAGIFKAILVGQVGQLPLQKKLK 121

Query: 124 NGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAPPGT 183
           +G+ +TL +VGTGGIRN R P  NE+PREYA R  VQWHRV++YPE L D+V+KN  PGT
Sbjct: 122 SGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGT 181

Query: 184 ILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGYF 242
           I+YLEGNLETKIFTD  TGLV+R+RE+AIRRNGRVVFLG  GD  QPS+ EL+GVGY+
Sbjct: 182 IVYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSSELRGVGYY 217

[Close]

BLAST of Spo08065.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGA8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188820 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 9.300e-134
Identity = 241/241 (100.00%), Postives = 241/241 (100.00%), Query Frame = 1


		  
Query: 1   MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSD 60
           MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSD
Sbjct: 1   MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSD 60

Query: 61  TESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQK 120
           TESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQK
Sbjct: 61  TESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQK 120

Query: 121 RLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAP 180
           RLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAP
Sbjct: 121 RLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAP 180

Query: 181 PGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGY 240
           PGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGY
Sbjct: 181 PGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGY 240

Query: 241 F 242
           F
Sbjct: 241 F 241

[Close]

BLAST of Spo08065.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBZ0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g125990 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.200e-88
Identity = 170/241 (70.54%), Postives = 201/241 (83.40%), Query Frame = 1


		  
Query: 1   MATSNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSD 60
           MA+SNS+AAISRRLYRNL+SN K   +   ++ SFFST P  PD   D LLDELPTL+S+
Sbjct: 1   MASSNSLAAISRRLYRNLLSNSKNPYFHQQSSKSFFSTEPLTPDS--DTLLDELPTLNSE 60

Query: 61  TESTELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQK 120
           +E+ E   DNS ASSS+  ST P+S   RA ++  LEGGLDIGIYKAILVGQVGQ P+QK
Sbjct: 61  SETNESTHDNSAASSSDSFSTPPESPVRRAASEFSLEGGLDIGIYKAILVGQVGQIPVQK 120

Query: 121 RLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAP 180
           RLKNG ++TLTT+GTGGI+NER+PFPNEEPREYADRCNVQWHRVAIYPE LG++VMK+A 
Sbjct: 121 RLKNGMVVTLTTLGTGGIKNERVPFPNEEPREYADRCNVQWHRVAIYPEKLGEIVMKHAQ 180

Query: 181 PGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGY 240
           PG++LYLEGNLE KIFT+  TGL+KR+REIA+RR+GRVVFLGN  DF+QPS  ELKGVGY
Sbjct: 181 PGSLLYLEGNLERKIFTEPLTGLLKRVREIAVRRDGRVVFLGNSSDFNQPSRDELKGVGY 239

Query: 241 F 242
           F
Sbjct: 241 F 239

[Close]

BLAST of Spo08065.1 vs. UniProtKB/TrEMBL
Match: V4M6U7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021489mg PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.200e-61
Identity = 137/239 (57.32%), Postives = 171/239 (71.55%), Query Frame = 1


		  
Query: 4   SNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSDTES 63
           +NSMA +SRRLYR+L+SN +     + ++ SF S   SI  D     LDEL + +SDTES
Sbjct: 2   ANSMATLSRRLYRSLLSNPR----FSQSSMSFCSN--SISSD-----LDEL-SANSDTES 61

Query: 64  TELPPDNSTASSSEFSSTSPKSAGH-RAYNQTVLEGGLDIGIYKAILVGQVGQSPMQKRL 123
                       S++S    + +G  R   +  LE GLD GIYKAILVGQVGQ P+QK+L
Sbjct: 62  P---------LESKYSDPMSRVSGEERVMEEHPLENGLDAGIYKAILVGQVGQLPLQKKL 121

Query: 124 KNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAPPG 183
           K+G+ +TL +VGTGGIRN R P  NE+PREYA+R  VQWHRV++YPE L D+V+KN  PG
Sbjct: 122 KSGRTVTLFSVGTGGIRNNRRPMINEDPREYANRSAVQWHRVSVYPERLADLVLKNVEPG 181

Query: 184 TILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGYF 242
           TI+YLEGNLETKIFTD  TGLV+R+RE+AIRRNGRVVFLG  GD  QPS+ EL+GVGY+
Sbjct: 182 TIVYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSSELRGVGYY 219

[Close]

BLAST of Spo08065.1 vs. UniProtKB/TrEMBL
Match: A0A078F1K6_BRANA (BnaA10g05230D protein OS=Brassica napus GN=BnaA10g05230D PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.800e-61
Identity = 134/238 (56.30%), Postives = 166/238 (69.75%), Query Frame = 1


		  
Query: 4   SNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSDTES 63
           +NSMA +SRRLYR+L+SN +            FS  P     N +  +DEL +  SDTES
Sbjct: 2   ANSMATLSRRLYRSLLSNPR------------FSQSPRSLCTNNN--VDELSSSISDTES 61

Query: 64  TELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQKRLK 123
              P  N++  +  FS         R   +  LE GLD GI+KAILVGQVGQ P+QK+LK
Sbjct: 62  PHQP--NASDRNHRFSGED------RVMEERPLENGLDAGIFKAILVGQVGQLPLQKKLK 121

Query: 124 NGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAPPGT 183
           +G+ +TL +VGTGGIRN R P  NE+PREYA+R  VQWHRV++YPE L D+V+KN  PGT
Sbjct: 122 SGRTVTLFSVGTGGIRNNRRPLINEDPREYANRSAVQWHRVSVYPERLADLVLKNVEPGT 181

Query: 184 ILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGYF 242
           I+YLEGNLETKIFTD  TGLV+R+RE+AIRRNGRVVFLG  GD  QPS+ EL+GVGY+
Sbjct: 182 IVYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSSELRGVGYY 217

[Close]

BLAST of Spo08065.1 vs. UniProtKB/TrEMBL
Match: A0A0D3ACJ2_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.600e-61
Identity = 134/238 (56.30%), Postives = 165/238 (69.33%), Query Frame = 1


		  
Query: 4   SNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSDTES 63
           +NSMA +SRRLYR+L+SN +            FS  P     N +  +DEL +  SDTES
Sbjct: 2   ANSMATLSRRLYRSLLSNPR------------FSQSPRSLCTNNN--VDELSSSISDTES 61

Query: 64  TELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQKRLK 123
              P  N++  +  FS         R   +  LE GLD GI+KAILVGQVGQ P+QK+LK
Sbjct: 62  PHQP--NASDRNHRFSGED------RVMEERPLENGLDAGIFKAILVGQVGQLPLQKKLK 121

Query: 124 NGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAPPGT 183
           +G+ +TL +VGTGGIRN R P  NE+PREYA R  VQWHRV++YPE L D+V+KN  PGT
Sbjct: 122 SGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGT 181

Query: 184 ILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGYF 242
           I+YLEGNLETKIFTD  TGLV+R+RE+AIRRNGRVVFLG  GD  QPS+ EL+GVGY+
Sbjct: 182 IVYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSSELRGVGYY 217

[Close]

BLAST of Spo08065.1 vs. ExPASy Swiss-Prot
Match: SSBP_ARATH (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana GN=At4g11060 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.800e-21
Identity = 65/205 (31.71%), Postives = 111/205 (54.15%), Query Frame = 1


		  
Query: 32  TNSFFSTGPSIPDDNLDKLLDELPTLDSDTESTELPPDNSTASSSEFSSTSPKSAGHRAY 91
           + S+FSTGP   D+ +++  +E     + TE  EL P               K  G R  
Sbjct: 28  SKSWFSTGPI--DEGVEEDFEE-----NVTERPELQPHGVDPR---------KGWGFR-- 87

Query: 92  NQTVLEGGLDIGIYKAILVGQVGQSPMQKRLKNGKLMTLTTVGTGGIRNERIPFPNEEPR 151
                      G+++AI+ G+VGQ+P+QK L+NG+ +T+ TVGTGG+ ++R+     +P+
Sbjct: 88  -----------GVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQPK 147

Query: 152 EYADRCNVQWHRVAIYPEHLGDVVMKNAPPGTILYLEGNLETKIFTDQNTGLVKRMREIA 211
                   QWHR+A++ E LG   ++     + +Y+EG++ET+++ D  +  VK + EI 
Sbjct: 148 P------AQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEIC 197

Query: 212 IRRNGRVVFLGNGGDFSQPSAHELK 237
           +RR+G++  +  G   S+ S  ELK
Sbjct: 208 VRRDGKIRMIKYGESISKISFDELK 197

[Close]

BLAST of Spo08065.1 vs. ExPASy Swiss-Prot
Match: SSB_WIGBR (Single-stranded DNA-binding protein OS=Wigglesworthia glossinidia brevipalpis GN=ssb PE=3 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.100e-10
Identity = 43/134 (32.09%), Postives = 72/134 (53.73%), Query Frame = 1


		  
Query: 103 GIYKAILVGQVGQSPMQKRLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWH 162
           GI K IL+G +GQ P  + + NG  +T  ++ T     ++    ++E  E        WH
Sbjct: 5   GINKVILIGNLGQDPEVRYIPNGNAITNLSLATSENWRDKNTGESKEKTE--------WH 64

Query: 163 RVAIYPEHLGDVVMKNAPPGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLG 222
           RV ++ + L +V  +    G+ +Y+EGNL+T+ + DQN G  + + EI +  NG +  LG
Sbjct: 65  RVILFGK-LAEVAGEYLKKGSQVYIEGNLQTRKWQDQN-GQDRYITEIVVGINGCMQMLG 124

Query: 223 NGG--DFSQPSAHE 235
           N    D+++P A E
Sbjct: 125 NRASYDYTKPEAKE 128

[Close]

BLAST of Spo08065.1 vs. ExPASy Swiss-Prot
Match: SSB2_SALTY (Single-stranded DNA-binding protein 2 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ssb2 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.700e-8
Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 1


		  
Query: 103 GIYKAILVGQVGQSPMQKRLKNGKL---MTLTTVGTGGIRNERIPFPNEEPREYADRCNV 162
           G+ K ILVG +GQ P  + + NG     +TL T  T  +R +       E RE+ +    
Sbjct: 5   GVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRVRQDG------EMREHTE---- 64

Query: 163 QWHRVAIYPEHLGDVVMKNAPPGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVV 222
            WHRV ++ + L ++  +    G  +Y+EG L T+ +TDQ +G  K   E+ +   G + 
Sbjct: 65  -WHRVVVFGK-LAEIASEYLRKGAQVYIEGQLRTRKWTDQ-SGQDKYTTEVIVNVGGTMQ 120

Query: 223 FLGNGGDFSQP 231
            LG     SQP
Sbjct: 125 MLGRHN--SQP 120

[Close]

BLAST of Spo08065.1 vs. ExPASy Swiss-Prot
Match: SSB_ECOLI (Single-stranded DNA-binding protein OS=Escherichia coli (strain K12) GN=ssb PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.500e-7
Identity = 37/135 (27.41%), Postives = 63/135 (46.67%), Query Frame = 1


		  
Query: 103 GIYKAILVGQVGQSPMQKRLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWH 162
           G+ K ILVG +GQ P  + + NG  +   T+ T     ++     +E  E        WH
Sbjct: 5   GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 64

Query: 163 RVAIYPEHLGDVVMKNAPPGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLG 222
           RV ++ + L +V  +    G+ +Y+EG L T+ +TDQ +G  +   E+ +   G +  LG
Sbjct: 65  RVVLFGK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 124

Query: 223 NGGDFSQPSAHELKG 238
                  P+   + G
Sbjct: 125 GRQGGGAPAGGNIGG 129

[Close]

BLAST of Spo08065.1 vs. ExPASy Swiss-Prot
Match: SSB_ECOL6 (Single-stranded DNA-binding protein OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ssb PE=3 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.500e-7
Identity = 37/135 (27.41%), Postives = 63/135 (46.67%), Query Frame = 1


		  
Query: 103 GIYKAILVGQVGQSPMQKRLKNGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWH 162
           G+ K ILVG +GQ P  + + NG  +   T+ T     ++     +E  E        WH
Sbjct: 5   GVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKATGEMKEQTE--------WH 64

Query: 163 RVAIYPEHLGDVVMKNAPPGTILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLG 222
           RV ++ + L +V  +    G+ +Y+EG L T+ +TDQ +G  +   E+ +   G +  LG
Sbjct: 65  RVVLFGK-LAEVASEYLRKGSQVYIEGQLRTRKWTDQ-SGQDRYTTEVVVNVGGTMQMLG 124

Query: 223 NGGDFSQPSAHELKG 238
                  P+   + G
Sbjct: 125 GRQGGGAPAGGNIGG 129

[Close]

BLAST of Spo08065.1 vs. TAIR (Arabidopsis)
Match: AT3G18580.1 (Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 238.0 bits (606), Expect = 5.900e-63
Identity = 127/238 (53.36%), Postives = 162/238 (68.07%), Query Frame = 1


		  
Query: 4   SNSMAAISRRLYRNLISNKKPSCYLNHTTNSFFSTGPSIPDDNLDKLLDELPTLDSDTES 63
           +NSMA +SRRLYR+L+SN +    ++  + SF +   + P+D             SD + 
Sbjct: 2   ANSMATLSRRLYRSLLSNPR----ISQASMSFCTNNITSPED-------------SDFDE 61

Query: 64  TELPPDNSTASSSEFSSTSPKSAGHRAYNQTVLEGGLDIGIYKAILVGQVGQSPMQKRLK 123
            E P +   +        S  S   R   +  LE GLD GI+KAILVGQVGQ P+QK+LK
Sbjct: 62  LESPIEPKASDP-----VSRFSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLK 121

Query: 124 NGKLMTLTTVGTGGIRNERIPFPNEEPREYADRCNVQWHRVAIYPEHLGDVVMKNAPPGT 183
           +G+ +TL +VGTGGIRN R P  NE+PREYA R  VQWHRV++YPE L D+V+KN  PGT
Sbjct: 122 SGRTVTLFSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGT 181

Query: 184 ILYLEGNLETKIFTDQNTGLVKRMREIAIRRNGRVVFLGNGGDFSQPSAHELKGVGYF 242
           ++YLEGNLETKIFTD  TGLV+R+RE+AIRRNGRVVFLG  GD  QPS+ EL+GVGY+
Sbjct: 182 VIYLEGNLETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 217

[Close]

BLAST of Spo08065.1 vs. TAIR (Arabidopsis)
Match: AT4G11060.1 (mitochondrially targeted single-stranded DNA binding protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.000e-22
Identity = 65/205 (31.71%), Postives = 111/205 (54.15%), Query Frame = 1


		  
Query: 32  TNSFFSTGPSIPDDNLDKLLDELPTLDSDTESTELPPDNSTASSSEFSSTSPKSAGHRAY 91
           + S+FSTGP   D+ +++  +E     + TE  EL P               K  G R  
Sbjct: 28  SKSWFSTGPI--DEGVEEDFEE-----NVTERPELQPHGVDPR---------KGWGFR-- 87

Query: 92  NQTVLEGGLDIGIYKAILVGQVGQSPMQKRLKNGKLMTLTTVGTGGIRNERIPFPNEEPR 151
                      G+++AI+ G+VGQ+P+QK L+NG+ +T+ TVGTGG+ ++R+     +P+
Sbjct: 88  -----------GVHRAIICGKVGQAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQPK 147

Query: 152 EYADRCNVQWHRVAIYPEHLGDVVMKNAPPGTILYLEGNLETKIFTDQNTGLVKRMREIA 211
                   QWHR+A++ E LG   ++     + +Y+EG++ET+++ D  +  VK + EI 
Sbjct: 148 P------AQWHRIAVHNEVLGSYAVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEIC 197

Query: 212 IRRNGRVVFLGNGGDFSQPSAHELK 237
           +RR+G++  +  G   S+ S  ELK
Sbjct: 208 VRRDGKIRMIKYGESISKISFDELK 197

The following BLAST results are available for this feature:

BLAST of Spo08065.1 vs. NCBI nr
BLAST of Spo08065.1 vs. UniProtKB/TrEMBL
BLAST of Spo08065.1 vs. ExPASy Swiss-Prot
BLAST of Spo08065.1 vs. TAIR (Arabidopsis)

BLAST of Spo08065.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902152158\|gb\|KNA05586.1\|	1.3e-133	100.	hypothetical protein SOVF_1888...	[more]
gi\|731367438\|ref\|XP_010695611.1\|	1.7e-88	70.5	PREDICTED: single-stranded DNA...	[more]
gi\|567197507\|ref\|XP_006406590.1\|	1.8e-61	57.3	hypothetical protein EUTSA_v10...	[more]
gi\|674926664\|emb\|CDY06744.1\|	4.0e-61	56.3	BnaA10g05230D [Brassica napus]	[more]
gi\|922412521\|ref\|XP_013639035.1\|	5.2e-61	56.3	PREDICTED: single-stranded DNA...	[more]

BLAST of Spo08065.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QGA8_SPIOL	9.3e-134	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8BBZ0_BETVU	1.2e-88	70.5	Uncharacterized protein OS=Bet...	[more]
V4M6U7_EUTSA	1.2e-61	57.3	Uncharacterized protein OS=Eut...	[more]
A0A078F1K6_BRANA	2.8e-61	56.3	BnaA10g05230D protein OS=Brass...	[more]
A0A0D3ACJ2_BRAOL	3.6e-61	56.3	Uncharacterized protein OS=Bra...	[more]

BLAST of Spo08065.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
SSBP_ARATH	1.8e-21	31.7	Single-stranded DNA-binding pr...	[more]
SSB_WIGBR	1.1e-10	32.0	Single-stranded DNA-binding pr...	[more]
SSB2_SALTY	8.7e-8	32.0	Single-stranded DNA-binding pr...	[more]
SSB_ECOLI	1.5e-7	27.4	Single-stranded DNA-binding pr...	[more]
SSB_ECOL6	1.5e-7	27.4	Single-stranded DNA-binding pr...	[more]

BLAST of Spo08065.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G18580.1	5.9e-63	53.3	Nucleic acid-binding, OB-fold-...	[more]
AT4G11060.1	1.0e-22	31.7	mitochondrially targeted singl...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000424	Primosome PriB/single-strand DNA-binding	PFAM	PF00436	SSB	coord: 106..213 score: 7.7
IPR000424	Primosome PriB/single-strand DNA-binding	PROFILE	PS50935	SSB	coord: 104..219 score: 11
IPR011344	Single-stranded DNA-binding protein	PANTHER	PTHR10302	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 6..229 score: 1.1
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140		coord: 103..222 score: 9.6
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 103..214 score: 1.65
None	No IPR available	PANTHER	PTHR10302:SF3	SINGLE-STRANDED DNA-BINDING PROTEIN	coord: 6..229 score: 1.1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
molecular_function	GO:0003697	single-stranded DNA binding