Spo08101.1 (mRNA) | SpinachBase

Overview


Name	Spo08101.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Gibberellin-regulated protein 6 (GAST1 protein homolog 6) (Precursor)
Location	chr5 : 10781556 .. 10782558 (+)
Sequence length	883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATTCAATTAATTGATTGATAACTAGGCAGCCTAAATTATTAACACAACTCTTCACAAGAGGAGGTCAGCGATATTAGCGGAGAGAGGGACAATTTAATTGACATAATTTGAAAGTCAATGCAAAACTGTAGTTTGTTCACAATTAAGTTGCACCAAATTAATCTATAAATACCTCATTTACATCGATCCCAAACATAAGCAACCCACAATTAACCAAGAATTCTCTTAAACACCCCTCTCCTAATTGTTCTTTGAAGTTAAAATGGCCAATATTAAGGCTTTCTCTTTGCTTTTGGCTTTCCTCGTCGTTTCCATGCTTATTGCAGACGTTTATGCTGGAGTCAACTATTACGGGAATAACAGTTTGAAACCTTATCGTAAGTAATTATTGTAATTGGATGTTATATTATAGTAGTACGTGAAATTGTAAAGTTATTTTCTTCGTTTACACTAGTAATTAATTTGATTTGATTTGATTTGATTTTGAAATTGAACAGAATGTCAAGGACGTTGTACTCAGAGGTGCTCAAAGGCTAGAAAAACTCATGAATGCATGTTCTTTTGCTTGAAGTGTTGCGCCACATGCCTTTGCGTTCCACCAGGCACCTATGGAAACAAAGAAGTCTGCCCTTGCTACAACAACTGGAAGACTAAGAGGGGAACTTCCAAGTGCCCTTAATTTCATTGCATTTAGAGATGGAATAAAGCTCTAACATTTACGTATTACTGCTACTACTTTATGTTTACGTTTGTGAAATAGTACTAAGTTTCAATTTAGTACTCGTACTAGAATATGTGTTTTTCAATATTGTGATCGATTTTAAATTGTACTTTGAATTTCGTTGGCGAATTAATCATCTGCTTCATTGAAGGGTCTGAAAATTTGTTGTGAACCCACAATTGAGAGCGTTGTTGGTCAAGATTTTTTGGCCACTTTATGTTTTACATTTGGCGACGGCCCATTGGCTTAGCTATAATAATAATAATAATTAAAAAAAAAA

mRNA sequence

TGATTCAATTAATTGATTGATAACTAGGCAGCCTAAATTATTAACACAACTCTTCACAAGAGGAGGTCAGCGATATTAGCGGAGAGAGGGACAATTTAATTGACATAATTTGAAAGTCAATGCAAAACTGTAGTTTGTTCACAATTAAGTTGCACCAAATTAATCTATAAATACCTCATTTACATCGATCCCAAACATAAGCAACCCACAATTAACCAAGAATTCTCTTAAACACCCCTCTCCTAATTGTTCTTTGAAGTTAAAATGGCCAATATTAAGGCTTTCTCTTTGCTTTTGGCTTTCCTCGTCGTTTCCATGCTTATTGCAGACGTTTATGCTGGAGTCAACTATTACGGGAATAACAGTTTGAAACCTTATCAATGTCAAGGACGTTGTACTCAGAGGTGCTCAAAGGCTAGAAAAACTCATGAATGCATGTTCTTTTGCTTGAAGTGTTGCGCCACATGCCTTTGCGTTCCACCAGGCACCTATGGAAACAAAGAAGTCTGCCCTTGCTACAACAACTGGAAGACTAAGAGGGGAACTTCCAAGTGCCCTTAATTTCATTGCATTTAGAGATGGAATAAAGCTCTAACATTTACGTATTACTGCTACTACTTTATGTTTACGTTTGTGAAATAGTACTAAGTTTCAATTTAGTACTCGTACTAGAATATGTGTTTTTCAATATTGTGATCGATTTTAAATTGTACTTTGAATTTCGTTGGCGAATTAATCATCTGCTTCATTGAAGGGTCTGAAAATTTGTTGTGAACCCACAATTGAGAGCGTTGTTGGTCAAGATTTTTTGGCCACTTTATGTTTTACATTTGGCGACGGCCCATTGGCTTAGCTATAATAATAATAATAATTAAAAAAAAAA

Coding sequence (CDS)

ATGGCCAATATTAAGGCTTTCTCTTTGCTTTTGGCTTTCCTCGTCGTTTCCATGCTTATTGCAGACGTTTATGCTGGAGTCAACTATTACGGGAATAACAGTTTGAAACCTTATCAATGTCAAGGACGTTGTACTCAGAGGTGCTCAAAGGCTAGAAAAACTCATGAATGCATGTTCTTTTGCTTGAAGTGTTGCGCCACATGCCTTTGCGTTCCACCAGGCACCTATGGAAACAAAGAAGTCTGCCCTTGCTACAACAACTGGAAGACTAAGAGGGGAACTTCCAAGTGCCCTTAA

Protein sequence

MANIKAFSLLLAFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFFCLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08101	Spo08101	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08101.1	Spo08101.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08101.1.exon.1	Spo08101.1.exon.1	exon
Spo08101.1.exon.2	Spo08101.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08101.1.utr5p.1	Spo08101.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08101.1.CDS.1	Spo08101.1.CDS.1	CDS
Spo08101.1.CDS.2	Spo08101.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08101.1.utr3p.1	Spo08101.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo08101.1 vs. NCBI nr
Match: gi|731335027|ref|XP_010678521.1| (PREDICTED: gibberellin-regulated protein 6-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 173.3 bits (438), Expect = 2.100e-40
Identity = 80/98 (81.63%), Postives = 83/98 (84.69%), Query Frame = 1


		  
Query: 1  MANIKAFSLLLAFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFF 60
          MAN K  S+LLA LV+SML  +  A VN YGNNSLKPYQCQGRC QRCSKARKTHECMFF
Sbjct: 1  MANFKLLSVLLAILVISMLATEALA-VNNYGNNSLKPYQCQGRCVQRCSKARKTHECMFF 60

Query: 61 CLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          CLKCC  CLCVPPGTY NKEVCPCYNNWKTKR TSKCP
Sbjct: 61 CLKCCKKCLCVPPGTYANKEVCPCYNNWKTKRNTSKCP 97

[Close]

BLAST of Spo08101.1 vs. NCBI nr
Match: gi|731335029|ref|XP_010678522.1| (PREDICTED: gibberellin-regulated protein 6 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 159.1 bits (401), Expect = 4.000e-36
Identity = 71/98 (72.45%), Postives = 79/98 (80.61%), Query Frame = 1


		  
Query: 1  MANIKAFSLLLAFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFF 60
          MAN+K FS+LL FL++SML  +  A    YGN +LK YQC GRC QRCSKARKTHECMFF
Sbjct: 1  MANLKLFSVLLVFLLISMLATETLARHYQYGNGTLKIYQCPGRCAQRCSKARKTHECMFF 60

Query: 61 CLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          C+KCC  CLCVPPGTYG K +CPCYNNWKTKR TSKCP
Sbjct: 61 CMKCCRKCLCVPPGTYGYKFLCPCYNNWKTKRNTSKCP 98

[Close]

BLAST of Spo08101.1 vs. NCBI nr
Match: gi|731335025|ref|XP_010678520.1| (PREDICTED: gibberellin-regulated protein 6-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 124.8 bits (312), Expect = 8.400e-26
Identity = 62/99 (62.63%), Postives = 69/99 (69.70%), Query Frame = 1


		  
Query: 1  MANIKAFSLLL-AFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMF 60
          MAN KA SLLL A +  SML  +V A    YG  SLK  QC G+CT+RCS+ +    CMF
Sbjct: 1  MANSKAISLLLLALIAFSMLATEVLA--KNYGPGSLKGSQCLGQCTRRCSRTQYHKPCMF 60

Query: 61 FCLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          FC KCC  CLCVPPG YGNK+VCPCYNNWKTK G  KCP
Sbjct: 61 FCQKCCRKCLCVPPGFYGNKQVCPCYNNWKTKEGGPKCP 97

[Close]

BLAST of Spo08101.1 vs. NCBI nr
Match: gi|702496156|ref|XP_010037169.1| (PREDICTED: gibberellin-regulated protein 6 [Eucalyptus grandis])

HSP 1 Score: 123.2 bits (308), Expect = 2.400e-25
Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1


		  
Query: 9   LLLAFLVVSMLIADVYAGV------NYYGNNSLKPYQCQGRCTQRCSKARKTHECMFFCL 68
           LLLA L +SM+   V A        N YG  SLK YQC G+C +RCS+ +    C+FFC 
Sbjct: 10  LLLALLGISMVATQVMAKEAQYQLDNAYGGGSLKSYQCAGQCQRRCSQTQYRKPCLFFCN 69

Query: 69  KCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
           KCCA CLCVPPG YGNK+VCPCYNNWKT++GT KCP
Sbjct: 70  KCCAKCLCVPPGYYGNKQVCPCYNNWKTQQGTPKCP 105

[Close]

BLAST of Spo08101.1 vs. NCBI nr
Match: gi|460391953|ref|XP_004241582.1| (PREDICTED: gibberellin-regulated protein 6-like [Solanum lycopersicum])

HSP 1 Score: 122.9 bits (307), Expect = 3.200e-25
Identity = 60/97 (61.86%), Postives = 64/97 (65.98%), Query Frame = 1


		  
Query: 9   LLLAFLVVSMLIADVYAG-------VNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFFC 68
           LLLA LV+SML   V A           YG  SLKP QC  +CT+RCSK +    CMFFC
Sbjct: 8   LLLALLVISMLANTVMAANGKHHHYAKKYGPGSLKPSQCLPQCTRRCSKTQYHKPCMFFC 67

Query: 69  LKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
            KCC  CLCVPPGTYGNK VCPCYNNWKTK G  KCP
Sbjct: 68  QKCCNKCLCVPPGTYGNKAVCPCYNNWKTKEGGPKCP 104

[Close]

BLAST of Spo08101.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFN2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g114770 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.400e-40
Identity = 80/98 (81.63%), Postives = 83/98 (84.69%), Query Frame = 1


		  
Query: 1  MANIKAFSLLLAFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFF 60
          MAN K  S+LLA LV+SML  +  A VN YGNNSLKPYQCQGRC QRCSKARKTHECMFF
Sbjct: 1  MANFKLLSVLLAILVISMLATEALA-VNNYGNNSLKPYQCQGRCVQRCSKARKTHECMFF 60

Query: 61 CLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          CLKCC  CLCVPPGTY NKEVCPCYNNWKTKR TSKCP
Sbjct: 61 CLKCCKKCLCVPPGTYANKEVCPCYNNWKTKRNTSKCP 97

[Close]

BLAST of Spo08101.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CFB2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g114780 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.800e-36
Identity = 71/98 (72.45%), Postives = 79/98 (80.61%), Query Frame = 1


		  
Query: 1  MANIKAFSLLLAFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFF 60
          MAN+K FS+LL FL++SML  +  A    YGN +LK YQC GRC QRCSKARKTHECMFF
Sbjct: 1  MANLKLFSVLLVFLLISMLATETLARHYQYGNGTLKIYQCPGRCAQRCSKARKTHECMFF 60

Query: 61 CLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          C+KCC  CLCVPPGTYG K +CPCYNNWKTKR TSKCP
Sbjct: 61 CMKCCRKCLCVPPGTYGYKFLCPCYNNWKTKRNTSKCP 98

[Close]

BLAST of Spo08101.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CB29_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g114760 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.800e-26
Identity = 62/99 (62.63%), Postives = 69/99 (69.70%), Query Frame = 1


		  
Query: 1  MANIKAFSLLL-AFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMF 60
          MAN KA SLLL A +  SML  +V A    YG  SLK  QC G+CT+RCS+ +    CMF
Sbjct: 1  MANSKAISLLLLALIAFSMLATEVLA--KNYGPGSLKGSQCLGQCTRRCSRTQYHKPCMF 60

Query: 61 FCLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          FC KCC  CLCVPPG YGNK+VCPCYNNWKTK G  KCP
Sbjct: 61 FCQKCCRKCLCVPPGFYGNKQVCPCYNNWKTKEGGPKCP 97

[Close]

BLAST of Spo08101.1 vs. UniProtKB/TrEMBL
Match: A0A059A3Y5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02472 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.700e-25
Identity = 57/96 (59.38%), Postives = 67/96 (69.79%), Query Frame = 1


		  
Query: 9   LLLAFLVVSMLIADVYAGV------NYYGNNSLKPYQCQGRCTQRCSKARKTHECMFFCL 68
           LLLA L +SM+   V A        N YG  SLK YQC G+C +RCS+ +    C+FFC 
Sbjct: 10  LLLALLGISMVATQVMAKEAQYQLDNAYGGGSLKSYQCAGQCQRRCSQTQYRKPCLFFCN 69

Query: 69  KCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
           KCCA CLCVPPG YGNK+VCPCYNNWKT++GT KCP
Sbjct: 70  KCCAKCLCVPPGYYGNKQVCPCYNNWKTQQGTPKCP 105

[Close]

BLAST of Spo08101.1 vs. UniProtKB/TrEMBL
Match: A0A0K9NLF0_ZOSMR (Gibberellin-regulated protein 6 OS=Zostera marina GN=ZOSMA_91G00610 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.200e-25
Identity = 55/98 (56.12%), Postives = 67/98 (68.37%), Query Frame = 1


		  
Query: 9   LLLAFLVVSMLIADVYAGV--------NYYGNNSLKPYQCQGRCTQRCSKARKTHECMFF 68
           LLLAF ++++L  +             ++YG  S+KPYQCQG+C +RC K +    C+FF
Sbjct: 28  LLLAFFLLAVLAVEAEEAEYHLTRVKGHHYGPGSVKPYQCQGQCRRRCGKTQYKKPCLFF 87

Query: 69  CLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
           C KCC TCLCVPPG YGNK VCPCYNNWKTKRG  KCP
Sbjct: 88  CNKCCNTCLCVPPGYYGNKSVCPCYNNWKTKRGGPKCP 125

[Close]

BLAST of Spo08101.1 vs. ExPASy Swiss-Prot
Match: GASA6_ARATH (Gibberellin-regulated protein 6 OS=Arabidopsis thaliana GN=GASA6 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.800e-26
Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 1


		  
Query: 9   LLLAFLVVSMLIADVYAGVNY--------YGNNSLKPYQCQGRCTQRCSKARKTHECMFF 68
           L+ +FL++++L   V   ++         YG  SLK YQC G+CT+RCS  +    CMFF
Sbjct: 4   LITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCMFF 63

Query: 69  CLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
           C KCCA CLCVPPGTYGNK+VCPCYNNWKT++G  KCP
Sbjct: 64  CQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Spo08101.1 vs. ExPASy Swiss-Prot
Match: GASA5_ARATH (Gibberellin-regulated protein 5 OS=Arabidopsis thaliana GN=GASA5 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.700e-23
Identity = 52/96 (54.17%), Postives = 57/96 (59.38%), Query Frame = 1


		  
Query: 3  NIKAFSLLLAFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFFCL 62
          N   F  LL  L VS L+     G        LKP QC  +C+ RCS       CMFFCL
Sbjct: 8  NALFFLTLLFLLSVSNLVQAARGG------GKLKPQQCNSKCSFRCSATSHKKPCMFFCL 67

Query: 63 KCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          KCC  CLCVPPGT+GNK+ CPCYNNWKTK G  KCP
Sbjct: 68 KCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]

BLAST of Spo08101.1 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.900e-23
Identity = 48/93 (51.61%), Postives = 60/93 (64.52%), Query Frame = 1


		  
Query: 6  AFSLLLAFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFFCLKCC 65
          +F LL++  ++ +  ++V  G N      L+P  C+ RCT RCS       CMFFC KCC
Sbjct: 9  SFLLLISMFLILLTFSNVVEGYN-----KLRPTDCKPRCTYRCSATSHKKPCMFFCQKCC 68

Query: 66 ATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          ATCLCVP G YGNK+ CPCYNNWKT+ G  KCP
Sbjct: 69 ATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96

[Close]

BLAST of Spo08101.1 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.900e-23
Identity = 45/64 (70.31%), Postives = 47/64 (73.44%), Query Frame = 1


		  
Query: 35  LKPYQCQGRCTQRCSKARKTHECMFFCLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGT 94
           L P  CQ +CT RCSK      CMFFC KCCA CLCVP GTYGNK+ CPCYNNWKTKRG 
Sbjct: 49  LHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGG 108

Query: 95  SKCP 99
            KCP
Sbjct: 109 PKCP 112

[Close]

BLAST of Spo08101.1 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2)

HSP 1 Score: 101.7 bits (252), Expect = 4.800e-21
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 1


		  
Query: 8   SLLLAFLVVSMLIADVYAGVNY----YGNNSLKPYQCQGRCTQRCSKARKTHECMFFCLK 67
           +L++ F++ +M++A   + V +    YG  SLK  QC   C +RC K +    C+ FC K
Sbjct: 12  TLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNK 71

Query: 68  CCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
           CC  CLCVPPG YGNK+VC CYNNWKT+ G  KCP
Sbjct: 72  CCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]

BLAST of Spo08101.1 vs. TAIR (Arabidopsis)
Match: AT1G74670.1 (Gibberellin-regulated family protein)

HSP 1 Score: 118.6 bits (296), Expect = 2.100e-27
Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 1


		  
Query: 9   LLLAFLVVSMLIADVYAGVNY--------YGNNSLKPYQCQGRCTQRCSKARKTHECMFF 68
           L+ +FL++++L   V   ++         YG  SLK YQC G+CT+RCS  +    CMFF
Sbjct: 4   LITSFLLLTILFTFVCLTMSKEAEYHPESYGPGSLKSYQCGGQCTRRCSNTKYHKPCMFF 63

Query: 69  CLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
           C KCCA CLCVPPGTYGNK+VCPCYNNWKT++G  KCP
Sbjct: 64  CQKCCAKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP 101

[Close]

BLAST of Spo08101.1 vs. TAIR (Arabidopsis)
Match: AT3G02885.1 (GAST1 protein homolog 5)

HSP 1 Score: 109.8 bits (273), Expect = 9.800e-25
Identity = 52/96 (54.17%), Postives = 57/96 (59.38%), Query Frame = 1


		  
Query: 3  NIKAFSLLLAFLVVSMLIADVYAGVNYYGNNSLKPYQCQGRCTQRCSKARKTHECMFFCL 62
          N   F  LL  L VS L+     G        LKP QC  +C+ RCS       CMFFCL
Sbjct: 8  NALFFLTLLFLLSVSNLVQAARGG------GKLKPQQCNSKCSFRCSATSHKKPCMFFCL 67

Query: 63 KCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
          KCC  CLCVPPGT+GNK+ CPCYNNWKTK G  KCP
Sbjct: 68 KCCKKCLCVPPGTFGNKQTCPCYNNWKTKEGRPKCP 97

[Close]

BLAST of Spo08101.1 vs. TAIR (Arabidopsis)
Match: AT5G15230.1 (GAST1 protein homolog 4)

HSP 1 Score: 101.7 bits (252), Expect = 2.700e-22
Identity = 46/95 (48.42%), Postives = 61/95 (64.21%), Query Frame = 1


		  
Query: 8   SLLLAFLVVSMLIADVYAGVNY----YGNNSLKPYQCQGRCTQRCSKARKTHECMFFCLK 67
           +L++ F++ +M++A   + V +    YG  SLK  QC   C +RC K +    C+ FC K
Sbjct: 12  TLIVLFMLQTMVMASSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNK 71

Query: 68  CCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
           CC  CLCVPPG YGNK+VC CYNNWKT+ G  KCP
Sbjct: 72  CCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106

[Close]

BLAST of Spo08101.1 vs. TAIR (Arabidopsis)
Match: AT3G10185.1 (Gibberellin-regulated family protein)

HSP 1 Score: 100.1 bits (248), Expect = 7.800e-22
Identity = 40/60 (66.67%), Postives = 44/60 (73.33%), Query Frame = 1


		  
Query: 39  QCQGRCTQRCSKARKTHECMFFCLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 98
           +C  RC  RCS  +    C+FFC KCC  CLCVPPGTYGNK+VCPCYNNWKTK G  KCP
Sbjct: 44  ECGPRCGDRCSNTQYKKPCLFFCNKCCNKCLCVPPGTYGNKQVCPCYNNWKTKSGGPKCP 103

[Close]

BLAST of Spo08101.1 vs. TAIR (Arabidopsis)
Match: AT2G30810.1 (Gibberellin-regulated family protein)

HSP 1 Score: 96.7 bits (239), Expect = 8.600e-21
Identity = 46/103 (44.66%), Postives = 57/103 (55.34%), Query Frame = 1


		  
Query: 9   LLLAFLVVSMLIADVYAGVNYY-------------GNNSLKPYQCQGRCTQRCSKARKTH 68
           L++ F++ S+L A  ++  +               G  SLKP +C   C  RCS      
Sbjct: 4   LIVVFVISSLLFATQFSNGDELESQAQAPAIHKNGGEGSLKPEECPKACEYRCSATSHRK 63

Query: 69  ECMFFCLKCCATCLCVPPGTYGNKEVCPCYNNWKTKRGTSKCP 99
            C+FFC KCC  CLCVP GTYG+KE CPCYNNW TK G  KCP
Sbjct: 64  PCLFFCNKCCNKCLCVPSGTYGHKEECPCYNNWTTKEGGPKCP 106

The following BLAST results are available for this feature:

BLAST of Spo08101.1 vs. NCBI nr
BLAST of Spo08101.1 vs. UniProtKB/TrEMBL
BLAST of Spo08101.1 vs. ExPASy Swiss-Prot
BLAST of Spo08101.1 vs. TAIR (Arabidopsis)

BLAST of Spo08101.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731335027\|ref\|XP_010678521.1\|	2.1e-40	81.6	PREDICTED: gibberellin-regulat...	[more]
gi\|731335029\|ref\|XP_010678522.1\|	4.0e-36	72.4	PREDICTED: gibberellin-regulat...	[more]
gi\|731335025\|ref\|XP_010678520.1\|	8.4e-26	62.6	PREDICTED: gibberellin-regulat...	[more]
gi\|702496156\|ref\|XP_010037169.1\|	2.4e-25	59.3	PREDICTED: gibberellin-regulat...	[more]
gi\|460391953\|ref\|XP_004241582.1\|	3.2e-25	61.8	PREDICTED: gibberellin-regulat...	[more]

BLAST of Spo08101.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8CFN2_BETVU	1.4e-40	81.6	Uncharacterized protein OS=Bet...	[more]
A0A0J8CFB2_BETVU	2.8e-36	72.4	Uncharacterized protein OS=Bet...	[more]
A0A0J8CB29_BETVU	5.8e-26	62.6	Uncharacterized protein OS=Bet...	[more]
A0A059A3Y5_EUCGR	1.7e-25	59.3	Uncharacterized protein OS=Euc...	[more]
A0A0K9NLF0_ZOSMR	2.2e-25	56.1	Gibberellin-regulated protein ...	[more]

BLAST of Spo08101.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
GASA6_ARATH	3.8e-26	55.1	Gibberellin-regulated protein ...	[more]
GASA5_ARATH	1.7e-23	54.1	Gibberellin-regulated protein ...	[more]
RSI1_SOLLC	3.9e-23	51.6	Protein RSI-1 OS=Solanum lycop...	[more]
GAST1_SOLLC	3.9e-23	70.3	Protein GAST1 OS=Solanum lycop...	[more]
GASA4_ARATH	4.8e-21	48.4	Gibberellin-regulated protein ...	[more]

BLAST of Spo08101.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G74670.1	2.1e-27	55.1	Gibberellin-regulated family p...	[more]
AT3G02885.1	9.8e-25	54.1	GAST1 protein homolog 5	[more]
AT5G15230.1	2.7e-22	48.4	GAST1 protein homolog 4	[more]
AT3G10185.1	7.8e-22	66.6	Gibberellin-regulated family p...	[more]
AT2G30810.1	8.6e-21	44.6	Gibberellin-regulated family p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 39..98 score: 4.0
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 13..98 score: 9.0
None	No IPR available	PANTHER	PTHR23201:SF1	GIBBERELLIN-REGULATED PROTEIN 12-RELATED	coord: 13..98 score: 9.0

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0009750	response to fructose
biological_process	GO:0009749	response to glucose
biological_process	GO:0080167	response to karrikin
biological_process	GO:0009744	response to sucrose
biological_process	GO:0010162	seed dormancy process