Spo08138.1 (mRNA) | SpinachBase

Overview


Name	Spo08138.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr5 : 11568119 .. 11570005 (+)
Sequence length	917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTGAACATCCCAGATTCTCAAACAGACGATGAATTCTAGGGAGCTCAAGTAGTAAGACTCAACTACTCCTCAGTCCTCAGTCCTCAGTCCTCAGTTCCTCACTCCAGACTGATGCCAAAAAGCCTCTCCCAAAAATTGACCACCGCATCCAATGCATAATAAAAGGCTGTAGTTCTTGGATTTATCACAGAAGTAAGAATCGGACGGTCAGTTTGATAGTAAGTAACAGAGGAACGGCTTTTGTAGGGGGTAAAGAATTCAAAAATTGGTTAATTTGACATGCGTTTGAAAATTTTGAAGAAATGGCAATCCGAGCTGACAGAAGGAGACATTTCATGTCAGTAGAGTTTGCTATGCAAAGAGAGATGGAATACAGACAAAAGCTGGATAACAAAGGTTCCGCCCAAACCCAGGTACTAGAGGTAGTTGTTTAATTCTATTCATATTTTATAAAATCTTTACATTTACTTCTCGGTTTGGTTTTAGTTGTCACGTTGATTGTGTAACTAATTCGGCAACAAGGTAGATTTGTGTCTGTTGGGGAAGGGGTAGTATTCTAATGGAAACATTAAGTTTCTACATACATCTAGTGATCTAGTCTTTGTAATTTTAACCGATTTGGGGTTTAAGTGTTCAACTAATTGAAGTTACCTGTAATTGTAAGAAGTGTTTGGTAAACTCCTTACATAAACTTATTTACTCAAATTTATAAGAAATTACTTTTGATTCTGAATTGAACTTGATAGCCCTTATCTGAACTATTTTAGACTCAAAATGAATTAAAAGATGAGGCAAATTGAAAAGTTGGTAAATGGATATGTTTTCTTCTCTAATTTGATGCTAATTTGGCATAGCTGATCAACGAGCAAGATATTGACCAGCCTTGTACTTTTGATATAGTGAGCTGATTCTGATATACTGATGTGAGGAGACTGTTGCAGTTACAACTAACAGCAACTGTACCTCCTGTCTTACAAGTTGTGGCATAAGCATGTTTAAGATATCACATATTGTTAATTCTATAAATTCGTGTACTAATTGTGTTGTCGCGAGGGGCCGAGGAAGGGTAAGTCGTCTAGTGCTCTTAGAACCCGATGTCACTTGGCTGCTACAATCTGAAAATAAATTTACTCAAGGGCTTGTTCGTGTTCTTAGTCGTTTGAACATAGTTTTCTTGAACTTCTGCTAGTTATTCAGATACTATTTGGGTACTCAGTAGTTTCTGAGGTTCGTGTTCTTGTTCTCTTGCACATAGTTTCCTTGAACTTCTGCTAGTTATTCAGAGTATTTAGGTACTCAGTAGTTTCTAAGCTTCGGGTTCTTATTCTTTTGCACATAGTTTTCTTGAACTTCTGCTAGTTATCAGTGTATTTAGCCACTCAGTTGGTGTAGGTACCAAGACCAACCTCAAGCCAAGATCCAAGGGCTACACCTCGGACAAATTTGAATCTGCATTCAGCTAACAGACCTGTTCACATTCCTGAGAATCCCGGTTCAGTACCACTTACAAGGCCTCCTTTGTACCCATGTCCAGCCCCGTATTCAAGACCAAGTCCAAGTTCAGGCCCATCGCGTTCTACACCTCTTCCAGTTGGAATTTTCACATGCAAAATCTGTCAGCTTGACTGCAAAACTGGGTTCAATCTGTTGTCACACTATCAGGGTCAAAAGCACAGGGCCAAAGTGGGAGGGGTGAGGCCTGCGAAGGGGAAGGAAGTTTCTAATTCCGGTGGAACAATGCAGCGAGAAAATGAGAAACGGCCCTACTGTGATGTGTGTGGGATCTGGTGCACTGACGAGTACAATTACAGGCTGCACTTCAGCTGCACAAACCACATTCTCAAACAGTATGACTGGCTCATGAAAAAAAGGATGCGCTTGTAA

mRNA sequence

CAATTGAACATCCCAGATTCTCAAACAGACGATGAATTCTAGGGAGCTCAAGTAGTAAGACTCAACTACTCCTCAGTCCTCAGTCCTCAGTCCTCAGTTCCTCACTCCAGACTGATGCCAAAAAGCCTCTCCCAAAAATTGACCACCGCATCCAATGCATAATAAAAGGCTGTAGTTCTTGGATTTATCACAGAAGTAAGAATCGGACGGTCAGTTTGATAGTAAGTAACAGAGGAACGGCTTTTGTAGGGGGTAAAGAATTCAAAAATTGGTTAATTTGACATGCGTTTGAAAATTTTGAAGAAATGGCAATCCGAGCTGACAGAAGGAGACATTTCATGTCAGTAGAGTTTGCTATGCAAAGAGAGATGGAATACAGACAAAAGCTGGATAACAAAGGTTCCGCCCAAACCCAGGTACTAGAGGTACCAAGACCAACCTCAAGCCAAGATCCAAGGGCTACACCTCGGACAAATTTGAATCTGCATTCAGCTAACAGACCTGTTCACATTCCTGAGAATCCCGGTTCAGTACCACTTACAAGGCCTCCTTTGTACCCATGTCCAGCCCCGTATTCAAGACCAAGTCCAAGTTCAGGCCCATCGCGTTCTACACCTCTTCCAGTTGGAATTTTCACATGCAAAATCTGTCAGCTTGACTGCAAAACTGGGTTCAATCTGTTGTCACACTATCAGGGTCAAAAGCACAGGGCCAAAGTGGGAGGGGTGAGGCCTGCGAAGGGGAAGGAAGTTTCTAATTCCGGTGGAACAATGCAGCGAGAAAATGAGAAACGGCCCTACTGTGATGTGTGTGGGATCTGGTGCACTGACGAGTACAATTACAGGCTGCACTTCAGCTGCACAAACCACATTCTCAAACAGTATGACTGGCTCATGAAAAAAAGGATGCGCTTGTAA

Coding sequence (CDS)

ATGGCAATCCGAGCTGACAGAAGGAGACATTTCATGTCAGTAGAGTTTGCTATGCAAAGAGAGATGGAATACAGACAAAAGCTGGATAACAAAGGTTCCGCCCAAACCCAGGTACTAGAGGTACCAAGACCAACCTCAAGCCAAGATCCAAGGGCTACACCTCGGACAAATTTGAATCTGCATTCAGCTAACAGACCTGTTCACATTCCTGAGAATCCCGGTTCAGTACCACTTACAAGGCCTCCTTTGTACCCATGTCCAGCCCCGTATTCAAGACCAAGTCCAAGTTCAGGCCCATCGCGTTCTACACCTCTTCCAGTTGGAATTTTCACATGCAAAATCTGTCAGCTTGACTGCAAAACTGGGTTCAATCTGTTGTCACACTATCAGGGTCAAAAGCACAGGGCCAAAGTGGGAGGGGTGAGGCCTGCGAAGGGGAAGGAAGTTTCTAATTCCGGTGGAACAATGCAGCGAGAAAATGAGAAACGGCCCTACTGTGATGTGTGTGGGATCTGGTGCACTGACGAGTACAATTACAGGCTGCACTTCAGCTGCACAAACCACATTCTCAAACAGTATGACTGGCTCATGAAAAAAAGGATGCGCTTGTAA

Protein sequence

MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSAQTQVLEVPRPTSSQDPRATPRTNLNLHSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGIFTCKICQLDCKTGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYRLHFSCTNHILKQYDWLMKKRMRL

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08138	Spo08138	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08138.1	Spo08138.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08138.1.exon.1	Spo08138.1.exon.1	exon
Spo08138.1.exon.2	Spo08138.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08138.1.utr5p.1	Spo08138.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08138.1.CDS.1	Spo08138.1.CDS.1	CDS
Spo08138.1.CDS.2	Spo08138.1.CDS.2	CDS

Homology

[Close]

BLAST of Spo08138.1 vs. NCBI nr
Match: gi|902222178|gb|KNA19116.1| (hypothetical protein SOVF_064280 [Spinacia oleracea])

HSP 1 Score: 409.8 bits (1052), Expect = 2.700e-111
Identity = 199/203 (98.03%), Postives = 199/203 (98.03%), Query Frame = 1

		  
Query: 1   MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSAQTQVLEVPRPTSSQDPRATPRTNLNL 60
           MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGS QTQV   PRPTSSQDPRATPRTNLNL
Sbjct: 1   MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSGQTQV---PRPTSSQDPRATPRTNLNL 60

Query: 61  HSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGIFTCKICQLDCK 120
           HSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGIFTCKICQLDCK
Sbjct: 61  HSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGIFTCKICQLDCK 120

Query: 121 TGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYR 180
           TGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYR
Sbjct: 121 TGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYR 180

Query: 181 LHFSCTNHILKQYDWLMKKRMRL 204
           LHFSCTNHILKQYDWLMKKRMRL
Sbjct: 181 LHFSCTNHILKQYDWLMKKRMRL 200

[Close]

BLAST of Spo08138.1 vs. NCBI nr
Match: gi|731324731|ref|XP_010673123.1| (PREDICTED: zinc finger RNA-binding protein 2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 247.7 bits (631), Expect = 1.800e-62
Identity = 134/213 (62.91%), Postives = 157/213 (73.71%), Query Frame = 1

		  
Query: 1   MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSAQTQVLEVPRPTSSQDPRAT--PRTNL 60
           MAIRADRR + MSVE AMQREME+RQKL N+ S Q QV    RPTSSQ P     P +N+
Sbjct: 1   MAIRADRRNYVMSVELAMQREMEFRQKLINQSSLQPQV---ERPTSSQVPGTIIQPASNV 60

Query: 61  NLHSANRPVHIPENPGSVPLTRPP---LYPCPAPYSRPSPSSGPSRST--------PLPV 120
            L  ++ P+  P N  SVP+ RPP    YP P+PYSRPSP++GPSRS         PLP 
Sbjct: 61  YLRPSHGPICGPTNTVSVPIARPPGLPPYPYPSPYSRPSPNAGPSRSADQRRNGRAPLPD 120

Query: 121 GIFTCKICQLDCKTGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCD 180
           GIFTCK+CQ+DCKTGFNLL HYQGQKH+A++ G    KGKEV++  G   RENEKRPYCD
Sbjct: 121 GIFTCKVCQIDCKTGFNLLGHYQGQKHKARLQG---GKGKEVAS--GKQPRENEKRPYCD 180

Query: 181 VCGIWCTDEYNYRLHFSCTNHILKQYDWLMKKR 201
           +CGIWCTDEY YR+HF+CTNHILKQYD LMKK+
Sbjct: 181 LCGIWCTDEYTYRMHFNCTNHILKQYDCLMKKK 205

[Close]

BLAST of Spo08138.1 vs. NCBI nr
Match: gi|731334879|ref|XP_010678445.1| (PREDICTED: zinc finger RNA-binding protein 2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 247.3 bits (630), Expect = 2.300e-62
Identity = 133/213 (62.44%), Postives = 156/213 (73.24%), Query Frame = 1

		  
Query: 1   MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSAQTQVLEVPRPTSSQDPRAT--PRTNL 60
           MAIRADRR + MSVE AMQREME+RQKL N+   Q QV    RPTSSQ P     P +N+
Sbjct: 1   MAIRADRRNYVMSVELAMQREMEFRQKLINQSPLQPQV---ERPTSSQVPGTIIQPASNV 60

Query: 61  NLHSANRPVHIPENPGSVPLTRPPL---YPCPAPYSRPSPSSGPSRST--------PLPV 120
            L  ++ P+  P N  SVP+ RPP    YP P+PYSRPSP++GPSRS         PLP 
Sbjct: 61  YLRPSHGPIRGPTNTVSVPIARPPSLPPYPYPSPYSRPSPNAGPSRSADQRQNGRAPLPD 120

Query: 121 GIFTCKICQLDCKTGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCD 180
           GIFTCK+CQ+DCKTGFNLL HYQGQKH+A++ G    KGKEV++  G   RENEKRPYCD
Sbjct: 121 GIFTCKVCQIDCKTGFNLLGHYQGQKHKARLQG---GKGKEVAS--GKQPRENEKRPYCD 180

Query: 181 VCGIWCTDEYNYRLHFSCTNHILKQYDWLMKKR 201
           +CGIWCTDEY YR+HF+CTNHILKQYD LMKK+
Sbjct: 181 LCGIWCTDEYTYRMHFNCTNHILKQYDCLMKKK 205

[Close]

BLAST of Spo08138.1 vs. NCBI nr
Match: gi|902222177|gb|KNA19115.1| (hypothetical protein SOVF_064270 [Spinacia oleracea])

HSP 1 Score: 118.6 bits (296), Expect = 1.200e-23
Identity = 89/231 (38.53%), Postives = 118/231 (51.08%), Query Frame = 1

		  
Query: 5   ADRRRHFMSVEFAMQREMEYRQKLDNKG-SAQTQV----------LEVPRPTSSQDPRA- 64
           ADR+ + MSVEFAM+REM YR+KL+ +G S+ T +          ++V  PTSS  PR  
Sbjct: 3   ADRKSYVMSVEFAMRREMAYRKKLNGEGGSSSTNICARNDRDPLPIQVIAPTSSHAPREI 62

Query: 65  -------------------TPRTNLNLHSANRPVHIP-ENPGS---------VPLTRPPL 124
                              TPR     + A RPV  P ++P S          PL RPPL
Sbjct: 63  LQPTQYSSPALTVRPMYNPTPRP----YYAPRPVQTPLQSPNSQHNELTTRSTPLVRPPL 122

Query: 125 YPCPAPYSRPSPS---SGPSRSTPLPVGIFTCKICQLDCKTGFNLLSHYQGQKHRAKVGG 184
               +  SRP  +   +   R  PL    + C++C++DC + FNL  H+ GQKH+AK   
Sbjct: 123 IQ--SQRSRPGAAHQLARKKRKKPLQEEDYFCELCEIDCTSEFNLRMHFNGQKHKAKK-- 182

Query: 185 VRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYRLHFSCTNHILK 192
            R A  K+VS SG   Q    +  YCD+C IWCTDE ++RLH    NHILK
Sbjct: 183 -REANSKKVSESG-VSQWGTRQHKYCDLCRIWCTDESSFRLHLDGKNHILK 223

[Close]

BLAST of Spo08138.1 vs. NCBI nr
Match: gi|590668303|ref|XP_007037455.1| (Uncharacterized protein isoform 2 [Theobroma cacao])

HSP 1 Score: 61.2 bits (147), Expect = 2.400e-6
Identity = 54/211 (25.59%), Postives = 89/211 (42.18%), Query Frame = 1

		  
Query: 5   ADRRRHFMSVEFAMQREMEYRQKLD--------NKGSAQTQVLEVP-------RPTSSQD 64
           A++R   MSVE A+QRE+ +R+K++        + G     V +V        RP  +  
Sbjct: 25  AEKRTSTMSVELAIQRELAFRRKIEELQLQPYVDSGDEIMPVQQVQFPHPNPSRPNLNSS 84

Query: 65  PRATPRTNLNLHSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGI 124
           PR + R  L   S+   +  P  P  +P +RP +   P    R   +S      P  +  
Sbjct: 85  PRLSGREQLASLSSLECLPSPI-PSQIPSSRPHISFGPRISERKQLASSSKSPPPQQLQA 144

Query: 125 FT------------CKICQLDCKTGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQ 184
           F             C +CQ+ C    N   H  G+KH+ K+  +   +       GG + 
Sbjct: 145 FNGGSLNHQSANVFCIVCQVPCSGSVNYKQHLNGKKHKLKLKELNFGR-----TDGGDIC 204

Query: 185 RENEKRPYCDVCGIWCTDEYNYRLHFSCTNH 189
               ++ +C++C IWCTD+   +LH +   H
Sbjct: 205 AMANQKLWCELCKIWCTDDNLLKLHLAGQKH 229

[Close]

BLAST of Spo08138.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RI02_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064280 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.900e-111
Identity = 199/203 (98.03%), Postives = 199/203 (98.03%), Query Frame = 1

		  
Query: 1   MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSAQTQVLEVPRPTSSQDPRATPRTNLNL 60
           MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGS QTQV   PRPTSSQDPRATPRTNLNL
Sbjct: 1   MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSGQTQV---PRPTSSQDPRATPRTNLNL 60

Query: 61  HSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGIFTCKICQLDCK 120
           HSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGIFTCKICQLDCK
Sbjct: 61  HSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGIFTCKICQLDCK 120

Query: 121 TGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYR 180
           TGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYR
Sbjct: 121 TGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYR 180

Query: 181 LHFSCTNHILKQYDWLMKKRMRL 204
           LHFSCTNHILKQYDWLMKKRMRL
Sbjct: 181 LHFSCTNHILKQYDWLMKKRMRL 200

[Close]

BLAST of Spo08138.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FH94_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g063800 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.200e-62
Identity = 134/213 (62.91%), Postives = 157/213 (73.71%), Query Frame = 1

		  
Query: 1   MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSAQTQVLEVPRPTSSQDPRAT--PRTNL 60
           MAIRADRR + MSVE AMQREME+RQKL N+ S Q QV    RPTSSQ P     P +N+
Sbjct: 1   MAIRADRRNYVMSVELAMQREMEFRQKLINQSSLQPQV---ERPTSSQVPGTIIQPASNV 60

Query: 61  NLHSANRPVHIPENPGSVPLTRPP---LYPCPAPYSRPSPSSGPSRST--------PLPV 120
            L  ++ P+  P N  SVP+ RPP    YP P+PYSRPSP++GPSRS         PLP 
Sbjct: 61  YLRPSHGPICGPTNTVSVPIARPPGLPPYPYPSPYSRPSPNAGPSRSADQRRNGRAPLPD 120

Query: 121 GIFTCKICQLDCKTGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCD 180
           GIFTCK+CQ+DCKTGFNLL HYQGQKH+A++ G    KGKEV++  G   RENEKRPYCD
Sbjct: 121 GIFTCKVCQIDCKTGFNLLGHYQGQKHKARLQG---GKGKEVAS--GKQPRENEKRPYCD 180

Query: 181 VCGIWCTDEYNYRLHFSCTNHILKQYDWLMKKR 201
           +CGIWCTDEY YR+HF+CTNHILKQYD LMKK+
Sbjct: 181 LCGIWCTDEYTYRMHFNCTNHILKQYDCLMKKK 205

[Close]

BLAST of Spo08138.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F4K7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g114090 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.600e-62
Identity = 133/213 (62.44%), Postives = 156/213 (73.24%), Query Frame = 1

		  
Query: 1   MAIRADRRRHFMSVEFAMQREMEYRQKLDNKGSAQTQVLEVPRPTSSQDPRAT--PRTNL 60
           MAIRADRR + MSVE AMQREME+RQKL N+   Q QV    RPTSSQ P     P +N+
Sbjct: 1   MAIRADRRNYVMSVELAMQREMEFRQKLINQSPLQPQV---ERPTSSQVPGTIIQPASNV 60

Query: 61  NLHSANRPVHIPENPGSVPLTRPPL---YPCPAPYSRPSPSSGPSRST--------PLPV 120
            L  ++ P+  P N  SVP+ RPP    YP P+PYSRPSP++GPSRS         PLP 
Sbjct: 61  YLRPSHGPIRGPTNTVSVPIARPPSLPPYPYPSPYSRPSPNAGPSRSADQRQNGRAPLPD 120

Query: 121 GIFTCKICQLDCKTGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQRENEKRPYCD 180
           GIFTCK+CQ+DCKTGFNLL HYQGQKH+A++ G    KGKEV++  G   RENEKRPYCD
Sbjct: 121 GIFTCKVCQIDCKTGFNLLGHYQGQKHKARLQG---GKGKEVAS--GKQPRENEKRPYCD 180

Query: 181 VCGIWCTDEYNYRLHFSCTNHILKQYDWLMKKR 201
           +CGIWCTDEY YR+HF+CTNHILKQYD LMKK+
Sbjct: 181 LCGIWCTDEYTYRMHFNCTNHILKQYDCLMKKK 205

[Close]

BLAST of Spo08138.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RI24_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_064270 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 8.700e-24
Identity = 89/231 (38.53%), Postives = 118/231 (51.08%), Query Frame = 1

		  
Query: 5   ADRRRHFMSVEFAMQREMEYRQKLDNKG-SAQTQV----------LEVPRPTSSQDPRA- 64
           ADR+ + MSVEFAM+REM YR+KL+ +G S+ T +          ++V  PTSS  PR  
Sbjct: 3   ADRKSYVMSVEFAMRREMAYRKKLNGEGGSSSTNICARNDRDPLPIQVIAPTSSHAPREI 62

Query: 65  -------------------TPRTNLNLHSANRPVHIP-ENPGS---------VPLTRPPL 124
                              TPR     + A RPV  P ++P S          PL RPPL
Sbjct: 63  LQPTQYSSPALTVRPMYNPTPRP----YYAPRPVQTPLQSPNSQHNELTTRSTPLVRPPL 122

Query: 125 YPCPAPYSRPSPS---SGPSRSTPLPVGIFTCKICQLDCKTGFNLLSHYQGQKHRAKVGG 184
               +  SRP  +   +   R  PL    + C++C++DC + FNL  H+ GQKH+AK   
Sbjct: 123 IQ--SQRSRPGAAHQLARKKRKKPLQEEDYFCELCEIDCTSEFNLRMHFNGQKHKAKK-- 182

Query: 185 VRPAKGKEVSNSGGTMQRENEKRPYCDVCGIWCTDEYNYRLHFSCTNHILK 192
            R A  K+VS SG   Q    +  YCD+C IWCTDE ++RLH    NHILK
Sbjct: 183 -REANSKKVSESG-VSQWGTRQHKYCDLCRIWCTDESSFRLHLDGKNHILK 223

[Close]

BLAST of Spo08138.1 vs. UniProtKB/TrEMBL
Match: A0A061FXE5_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_014123 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.600e-6
Identity = 54/211 (25.59%), Postives = 89/211 (42.18%), Query Frame = 1

		  
Query: 5   ADRRRHFMSVEFAMQREMEYRQKLD--------NKGSAQTQVLEVP-------RPTSSQD 64
           A++R   MSVE A+QRE+ +R+K++        + G     V +V        RP  +  
Sbjct: 25  AEKRTSTMSVELAIQRELAFRRKIEELQLQPYVDSGDEIMPVQQVQFPHPNPSRPNLNSS 84

Query: 65  PRATPRTNLNLHSANRPVHIPENPGSVPLTRPPLYPCPAPYSRPSPSSGPSRSTPLPVGI 124
           PR + R  L   S+   +  P  P  +P +RP +   P    R   +S      P  +  
Sbjct: 85  PRLSGREQLASLSSLECLPSPI-PSQIPSSRPHISFGPRISERKQLASSSKSPPPQQLQA 144

Query: 125 FT------------CKICQLDCKTGFNLLSHYQGQKHRAKVGGVRPAKGKEVSNSGGTMQ 184
           F             C +CQ+ C    N   H  G+KH+ K+  +   +       GG + 
Sbjct: 145 FNGGSLNHQSANVFCIVCQVPCSGSVNYKQHLNGKKHKLKLKELNFGR-----TDGGDIC 204

Query: 185 RENEKRPYCDVCGIWCTDEYNYRLHFSCTNH 189
               ++ +C++C IWCTD+   +LH +   H
Sbjct: 205 AMANQKLWCELCKIWCTDDNLLKLHLAGQKH 229

The following BLAST results are available for this feature:

BLAST of Spo08138.1 vs. NCBI nr
BLAST of Spo08138.1 vs. UniProtKB/TrEMBL
BLAST of Spo08138.1 vs. ExPASy Swiss-Prot
BLAST of Spo08138.1 vs. TAIR (Arabidopsis)

BLAST of Spo08138.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

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Match Name	E-value	Identity	Description
gi\|902222178\|gb\|KNA19116.1\|	2.7e-111	98.0	hypothetical protein SOVF_0642...	[more]
gi\|731324731\|ref\|XP_010673123.1\|	1.8e-62	62.9	PREDICTED: zinc finger RNA-bin...	[more]
gi\|731334879\|ref\|XP_010678445.1\|	2.3e-62	62.4	PREDICTED: zinc finger RNA-bin...	[more]
gi\|902222177\|gb\|KNA19115.1\|	1.2e-23	38.5	hypothetical protein SOVF_0642...	[more]
gi\|590668303\|ref\|XP_007037455.1\|	2.4e-6	25.5	Uncharacterized protein isofor...	[more]

BLAST of Spo08138.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

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Match Name	E-value	Identity	Description
A0A0K9RI02_SPIOL	1.9e-111	98.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8FH94_BETVU	1.2e-62	62.9	Uncharacterized protein OS=Bet...	[more]
A0A0J8F4K7_BETVU	1.6e-62	62.4	Uncharacterized protein OS=Bet...	[more]
A0A0K9RI24_SPIOL	8.7e-24	38.5	Uncharacterized protein OS=Spi...	[more]
A0A061FXE5_THECC	1.6e-6	25.5	Uncharacterized protein isofor...	[more]

BLAST of Spo08138.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

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Match Name	E-value	Identity	Description

BLAST of Spo08138.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

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Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Zinc finger, U1-type	SMART	SM00451	ZnF_U1_5	coord: 161..193 score: 11.0coord: 107..141 score: 0
IPR015880	Zinc finger, C2H2-like	SMART	SM00355	c2h2final6	coord: 110..134 score: 1.7coord: 164..188 score:
None	No IPR available	PFAM	PF12874	zf-met	coord: 165..183 score: 0.0094coord: 110..134 score: 1.
None	No IPR available	unknown	SSF57667	beta-beta-alpha zinc fingers	coord: 93..141 score: 2.53E-8coord: 144..198 score: 1.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding