Spo08274.1 (mRNA) | SpinachBase

Overview


Name	Spo08274.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	WRC protein
Location	SpoScf_01367 : 453 .. 3360 (-)
Sequence length	2014

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACCGTACTTGTTTCTTTCTTTCTCTCTCTTCCCAATATCTGATTCCGTCCACTCCACCGGCTACCTGCTGAGCAGGTAATCTCCCCTTTCTTTCCTGCACACGTGCCATCCTCAACCTTTTTAACCTTCTCGCACGTGCCTCTCCCCTCACCCATACACTACCATTTCTGTATGTTTATGTGTGTGTGGTGCAACAAATTTAAAGTAGGAGAGAGAAACCCACCTCAACAAACAAACACTATTTCTCATACACCACTGATGACTGATAGCTACCCCCTTTCTAGTTTCTAGTAAGAGAAACTCTCCATTTTCTTTTCATTTTTAGAGAGAGAAGTACAAATTAATAATACATAATTACCCCCATTAAAATCAATATATAGCTTGCATTTGTGTTATTGCACTAGCTATCTAGTTTTCTCTTTCTTAATCAGATCAGTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTAATTTCTGCACCCACAAAATAAAATAACTAACAAAAACCATGAGGATTAGGAATAGAAAGGTGCCTTTGCCACTTTCCCTTCTTTCGCCGGTACCTCTATCAGATCCCCACCTTTACAGCCGGTCACCGGTCATGCCAGTGCAAGATGTTGCAACTTATTCACCCGAGCCTCCGCCGTCGCCCAATGATTTGACAACTCCTACGTCGTGGCCTTCTTCCGATCTACACCAACACCGCGGTCTTGACAACAACACTAACGTTGGTGCTACTGTAAGTTAGTAACTTGGGGTTTGTTATTTCTCATGGTGGGAGAAATTGCACTACTCCGTACTATTCTACCTGTAATGATTACTTTTTCTATATTAAAGCCAAAGCCTAGCTAGCTCTAATCTTTCTGGTGTAATACGTAATAAATCATTTTTAATTAACCTCGCTCGTCAATTATTTTAATTTATGCCAGCGATTTGAAGATGGTGAACAAGTACAAATTTTAAGCCCAGCTCCAATACTTCACCAACTCAGGTAAAGACTTTCAAATTTACTATCATTTGATCTTCAATTATATGCAAGAGCCAAGAGCCAAGAGCCAAGTTAAAAAAAACAAAAAGAATTTACAGATTCTTTTATTTTTACTTTTCTATGTTGTCATATATACTTTTGATCAATTCTTGTAAATTAAAAGATGAATATCCCAAAAAAAAAGTGTATAATAAATTGAAGTATGTACATAAATATACGACTACTTTGATGTTAGAAAGTGGAGTATAAATTTAGAAGAAGAGCGTTTATATCATCGAGTGACCATACCTTCCCCATCTAATCGATCTCATATAGCTTATAGCTAGTCCTTTAAAATTTTCTTTTATTTGGTTATCTACCCAAAAAATAAAAGAAAAAGAGATTATTATTGTACTACACCAATGCGGTGGATGTTAGCATGGGGACGATGATGATCCCCATGAACAGCGAGTATTTTCTCTCTCCTCTACATACATATTGTTGCACCCACTTTCTTGTTTGTCTTAACTTTGTGTATTACCACTATTTTCTACCTTTGTAGTTTTTGCTCTTTAATGTCTGTGGTTGTTGATTTCTGGGATTTTCTGGTTTTTGGCAGCGCTACGACAAGTGCAGCAGGTGCATCAGAGAATAATAATGGTCGACTTGTATTTCTCTCCAATAATAAAGGTAATTATAAGATTTGATTCATAAATCATAATATATGGTCGACTTTTCAGTTGATGTTGAAAATTTAGGAATTATTGTTGTTGTGGGGGTGTGAATGCAATGTGATTAGATCGAGTAGGAAGGTGGTGCGATGGAGATAAAGCGATTCCACTGAAGAAAAGGAGAGGGTTCGGGTTCAATAATACTAGCTTTGCTGAGAACTCGTCTACAAGAATAACAACCGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGACGACACAGCGACTACAGCGACAACCGAGATGATAATAATGAAGTGGAATAACATAAATGATGATGAAGAAGAAAAACAAGCAGTGAAGGATGACAAGGACGCAGTAGTAGCACCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCAACAACGACTGTGAAGAAGGGAAATGCCAAAAGGGGCAACACTATACTAGAAGGGTCAAGGTGCAGCCGTGTGAACGGTAGAGGGTGGAGATGTTGTCAACCGACACTTGTGGGTTACTCCCTTTGCGAGCATCATTTAGGGAAGGGAAGATTACGGAGCATGAGTGCTAGTGCAAAATCACGATCCTCTAAGAAGAAGAGCAACTCTATTACTAAATTCGCGCTAGGCCGGGATGAAGAGAGTGATCATACAGTAGATGTAAGGGAGAAGAAACTTGAACGAATGAACTCGTTTGGCAATAAAAGGGTGAAACTTGGTGTTGTCAAAGCTCGATCTCTAAGCAGTTTGTTGGGTCAGACGAATGCCATGAAGAATAATAATATTGTTGCAGATAATCATGCAACTATGCAGCAACAAGAAAAGATTAGCAACTTGGATTATCAATGAGAAATCATCACCCATCATGGATTTCTGAAGACTGAAGACTGAAGACTGAAGACTGGAGGTTAGAGTTACATTATAAAACTTTATACGACTACTATAAACGGAACTTTAGTAGAACAAAAGAAAACAATTTCGGAGGTAGTATTATGTTTTTCAACGTACGTACTACGGTGTACTACTTTGGTGCAACTCTAAATCATCAACAACGAATTCAATATATACTATTAATGTAGGTTTTATGTGTTTTCTTAACTAGTTAATGTTGCATGTAATTATTGGTGATTAGTGTAATTTTAAGTTATTTCATAAACATGTTTAGCGACATAAGAGGAAATAAAATGGAC

mRNA sequence

TATACCGTACTTGTTTCTTTCTTTCTCTCTCTTCCCAATATCTGATTCCGTCCACTCCACCGGCTACCTGCTGAGCAGGTAATCTCCCCTTTCTTTCCTGCACACGTGCCATCCTCAACCTTTTTAACCTTCTCGCACGTGCCTCTCCCCTCACCCATACACTACCATTTCTGTATGTTTATGTGTGTGTGGTGCAACAAATTTAAAGTAGGAGAGAGAAACCCACCTCAACAAACAAACACTATTTCTCATACACCACTGATGACTGATAGCTACCCCCTTTCTAGTTTCTAGTAAGAGAAACTCTCCATTTTCTTTTCATTTTTAGAGAGAGAAGTACAAATTAATAATACATAATTACCCCCATTAAAATCAATATATAGCTTGCATTTGTGTTATTGCACTAGCTATCTAGTTTTCTCTTTCTTAATCAGATCAGTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTTTATTTTAATTTCTGCACCCACAAAATAAAATAACTAACAAAAACCATGAGGATTAGGAATAGAAAGGTGCCTTTGCCACTTTCCCTTCTTTCGCCGGTACCTCTATCAGATCCCCACCTTTACAGCCGGTCACCGGTCATGCCAGTGCAAGATGTTGCAACTTATTCACCCGAGCCTCCGCCGTCGCCCAATGATTTGACAACTCCTACGTCGTGGCCTTCTTCCGATCTACACCAACACCGCGGTCTTGACAACAACACTAACGTTGGTGCTACTCGATTTGAAGATGGTGAACAAGTACAAATTTTAAGCCCAGCTCCAATACTTCACCAACTCAGCGCTACGACAAGTGCAGCAGGTGCATCAGAGAATAATAATGGTCGACTTGTATTTCTCTCCAATAATAAAGATCGAGTAGGAAGGTGGTGCGATGGAGATAAAGCGATTCCACTGAAGAAAAGGAGAGGGTTCGGGTTCAATAATACTAGCTTTGCTGAGAACTCGTCTACAAGAATAACAACCGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGACGACACAGCGACTACAGCGACAACCGAGATGATAATAATGAAGTGGAATAACATAAATGATGATGAAGAAGAAAAACAAGCAGTGAAGGATGACAAGGACGCAGTAGTAGCACCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCAACAACGACTGTGAAGAAGGGAAATGCCAAAAGGGGCAACACTATACTAGAAGGGTCAAGGTGCAGCCGTGTGAACGGTAGAGGGTGGAGATGTTGTCAACCGACACTTGTGGGTTACTCCCTTTGCGAGCATCATTTAGGGAAGGGAAGATTACGGAGCATGAGTGCTAGTGCAAAATCACGATCCTCTAAGAAGAAGAGCAACTCTATTACTAAATTCGCGCTAGGCCGGGATGAAGAGAGTGATCATACAGTAGATGTAAGGGAGAAGAAACTTGAACGAATGAACTCGTTTGGCAATAAAAGGGTGAAACTTGGTGTTGTCAAAGCTCGATCTCTAAGCAGTTTGTTGGGTCAGACGAATGCCATGAAGAATAATAATATTGTTGCAGATAATCATGCAACTATGCAGCAACAAGAAAAGATTAGCAACTTGGATTATCAATGAGAAATCATCACCCATCATGGATTTCTGAAGACTGAAGACTGAAGACTGAAGACTGGAGGTTAGAGTTACATTATAAAACTTTATACGACTACTATAAACGGAACTTTAGTAGAACAAAAGAAAACAATTTCGGAGGTAGTATTATGTTTTTCAACGTACGTACTACGGTGTACTACTTTGGTGCAACTCTAAATCATCAACAACGAATTCAATATATACTATTAATGTAGGTTTTATGTGTTTTCTTAACTAGTTAATGTTGCATGTAATTATTGGTGATTAGTGTAATTTTAAGTTATTTCATAAACATGTTTAGCGACATAAGAGGAAATAAAATGGAC

Coding sequence (CDS)

ATGAGGATTAGGAATAGAAAGGTGCCTTTGCCACTTTCCCTTCTTTCGCCGGTACCTCTATCAGATCCCCACCTTTACAGCCGGTCACCGGTCATGCCAGTGCAAGATGTTGCAACTTATTCACCCGAGCCTCCGCCGTCGCCCAATGATTTGACAACTCCTACGTCGTGGCCTTCTTCCGATCTACACCAACACCGCGGTCTTGACAACAACACTAACGTTGGTGCTACTCGATTTGAAGATGGTGAACAAGTACAAATTTTAAGCCCAGCTCCAATACTTCACCAACTCAGCGCTACGACAAGTGCAGCAGGTGCATCAGAGAATAATAATGGTCGACTTGTATTTCTCTCCAATAATAAAGATCGAGTAGGAAGGTGGTGCGATGGAGATAAAGCGATTCCACTGAAGAAAAGGAGAGGGTTCGGGTTCAATAATACTAGCTTTGCTGAGAACTCGTCTACAAGAATAACAACCGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGAAGATGACGACACAGCGACTACAGCGACAACCGAGATGATAATAATGAAGTGGAATAACATAAATGATGATGAAGAAGAAAAACAAGCAGTGAAGGATGACAAGGACGCAGTAGTAGCACCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCAACAACGACTGTGAAGAAGGGAAATGCCAAAAGGGGCAACACTATACTAGAAGGGTCAAGGTGCAGCCGTGTGAACGGTAGAGGGTGGAGATGTTGTCAACCGACACTTGTGGGTTACTCCCTTTGCGAGCATCATTTAGGGAAGGGAAGATTACGGAGCATGAGTGCTAGTGCAAAATCACGATCCTCTAAGAAGAAGAGCAACTCTATTACTAAATTCGCGCTAGGCCGGGATGAAGAGAGTGATCATACAGTAGATGTAAGGGAGAAGAAACTTGAACGAATGAACTCGTTTGGCAATAAAAGGGTGAAACTTGGTGTTGTCAAAGCTCGATCTCTAAGCAGTTTGTTGGGTCAGACGAATGCCATGAAGAATAATAATATTGTTGCAGATAATCATGCAACTATGCAGCAACAAGAAAAGATTAGCAACTTGGATTATCAATGA

Protein sequence

MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSSDLHQHRGLDNNTNVGATRFEDGEQVQILSPAPILHQLSATTSAAGASENNNGRLVFLSNNKDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITTDEDEDEDEDEDEDEDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAPPAPAPAPAPAPATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMSASAKSRSSKKKSNSITKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLGVVKARSLSSLLGQTNAMKNNNIVADNHATMQQQEKISNLDYQ

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08274	Spo08274	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08274.1	Spo08274.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08274.1.utr5p.1	Spo08274.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08274.1.CDS.4	Spo08274.1.CDS.4	CDS
Spo08274.1.CDS.3	Spo08274.1.CDS.3	CDS
Spo08274.1.CDS.2	Spo08274.1.CDS.2	CDS
Spo08274.1.CDS.1	Spo08274.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08274.1.utr3p.1	Spo08274.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08274.1.exon.4	Spo08274.1.exon.4	exon
Spo08274.1.exon.3	Spo08274.1.exon.3	exon
Spo08274.1.exon.2	Spo08274.1.exon.2	exon
Spo08274.1.exon.1	Spo08274.1.exon.1	exon

Homology

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BLAST of Spo08274.1 vs. NCBI nr
Match: gi|902228162|gb|KNA21003.1| (hypothetical protein SOVF_047050 [Spinacia oleracea])

HSP 1 Score: 701.4 bits (1809), Expect = 8.300e-199
Identity = 372/389 (95.63%), Postives = 372/389 (95.63%), Query Frame = 1


		  
Query: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS 60
           MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS
Sbjct: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS 60

Query: 61  DLHQHRGLDNNTNVGATRFEDGEQVQILSPAPILHQLSATTSAAGASENNNGRLVFLSNN 120
           DLHQHRGLDNNTNVGATRFEDGEQVQI SPAPILHQLSATTSAAGASENNNGRLVFLSNN
Sbjct: 61  DLHQHRGLDNNTNVGATRFEDGEQVQISSPAPILHQLSATTSAAGASENNNGRLVFLSNN 120

Query: 121 KDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITT--------DEDEDEDEDEDED 180
           KDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITT        DEDEDEDEDEDED
Sbjct: 121 KDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITTDEDEDEDEDEDEDEDEDEDED 180

Query: 181 EDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAP--------PAPAPAPAPAP 240
           EDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAP        PAPAPAPAPAP
Sbjct: 181 EDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAPPAPAPAPAPAPAPAPAPAP 240

Query: 241 ATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMSASAK 300
           ATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMSASAK
Sbjct: 241 ATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMSASAK 300

Query: 301 SRSSKKKSNSITKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLGVVKARSLSSLLGQ 360
           SRSSKKKSNSITKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLGVVKARSLSSLLGQ
Sbjct: 301 SRSSKKKSNSITKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLGVVKARSLSSLLGQ 360

Query: 361 TNAMKNNNIVADNHATMQQQEKISNLDYQ 374
           TNAMKNNNIVADNHATMQQQEKISNLDYQ
Sbjct: 361 TNAMKNNNIVADNHATMQQQEKISNLDYQ 389

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BLAST of Spo08274.1 vs. NCBI nr
Match: gi|902237332|gb|KNA24757.1| (hypothetical protein SOVF_012940 [Spinacia oleracea])

HSP 1 Score: 436.0 bits (1120), Expect = 6.500e-119
Identity = 266/361 (73.68%), Postives = 277/361 (76.73%), Query Frame = 1


		  
Query: 32  MPVQDVATYSPEPPPSP-----NDLTTPTSWPSSDLHQHRGLDNNTNVGATRFEDGEQVQ 91
           MPVQDVATY  EPPP P     +  TTP SWPSSDLHQHR LDN TNVGATRFED E VQ
Sbjct: 1   MPVQDVATYLAEPPPLPPPPSSDHFTTPPSWPSSDLHQHRRLDN-TNVGATRFEDVEGVQ 60

Query: 92  ILSPAPILHQLSATTSAAGASENNN-GRLVFLSNNKDRVGRWCDGDKAIPLKKRR----- 151
           I S APILHQ+S TT AAGASENNN GRL+FLSNNKDRVGRWCDGDKAIPLKKRR     
Sbjct: 61  ISSTAPILHQVSPTTRAAGASENNNNGRLLFLSNNKDRVGRWCDGDKAIPLKKRRGFGFG 120

Query: 152 -GFGFNNTSFAENSSTRITTDEDEDEDEDEDEDEDDDTATTATTEMIIMKWNNINDDEEE 211
            GFGFNNT+FAENSST ITT          DED DD T T+  TEMIIMK N+INDD +E
Sbjct: 121 FGFGFNNTTFAENSSTIITT----------DEDGDDTTTTSTITEMIIMKCNDINDDADE 180

Query: 212 KQAVKDDKDAVVAPPAPAPAPAPAPATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQP 271
           KQ      DAVV  P P P PA A A  +VKKGN KRGNTILEGSRCSRVNGRGWRCCQP
Sbjct: 181 KQ------DAVVVAPPPPPGPA-AAAAASVKKGNGKRGNTILEGSRCSRVNGRGWRCCQP 240

Query: 272 TLVGYSLCEHHLGKGRLRSM-SASAKSRSSKKKSNS---ITKFALGRDEE-SDHTV-DVR 331
           TLVGYSLCEHHLGKGRLRSM SASAKSRSSK K  S    T+FA+GRDEE S HTV DVR
Sbjct: 241 TLVGYSLCEHHLGKGRLRSMSSASAKSRSSKNKKKSHSTTTEFAIGRDEERSHHTVDDVR 300

Query: 332 E-KKLERMNSFGNKRVKLGVVKARSLSSLLGQTNAMKNNNIVADNHATMQQQEKISNLDY 374
           E KKLERMNSFGNKRVKLGVVKARSLSSLLGQTN          NHA+MQQ E ISNLDY
Sbjct: 301 EKKKLERMNSFGNKRVKLGVVKARSLSSLLGQTN----------NHASMQQHENISNLDY 333

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BLAST of Spo08274.1 vs. NCBI nr
Match: gi|731323819|ref|XP_010672639.1| (PREDICTED: homeobox protein 10 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 266.2 bits (679), Expect = 8.900e-68
Identity = 193/394 (48.98%), Postives = 231/394 (58.63%), Query Frame = 1


		  
Query: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS 60
           MRIR RKVPLPLSLLSPVPLSDP+L+SRSPVM     A Y+                 +S
Sbjct: 1   MRIRKRKVPLPLSLLSPVPLSDPNLFSRSPVMVTLQGADYTS----------------AS 60

Query: 61  DLHQHRGLDNNTNVGATRFEDGEQV-----QILSPAPILHQLSATTSAA--------GAS 120
           DL   R +  NT    TRFE G+        +LS A I    + T  AA         A 
Sbjct: 61  DLR--RLIVANTTDDTTRFEGGDDGIQASNDVLSNASITTTTTTTRGAAIAVADLAVAAD 120

Query: 121 ENNNGRLVFLSNNKDRVGRWCDGDKAIPLKKRRGFGFNN--TSFAENSSTRITTDEDEDE 180
           ++NN  L+ LSNNK  VGRWCDGDKAIPLKKRRG  FNN      ++SST +        
Sbjct: 121 DDNNNGLLSLSNNK--VGRWCDGDKAIPLKKRRGISFNNDFVEIEQHSSTIMV------- 180

Query: 181 DEDEDEDEDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAPPAPAPAPAPAPA 240
                +D+  + AT     +   + + I+DD         + + VV              
Sbjct: 181 -----DDKKLNAATLTKRNLKEDEQSTIHDDNNNNNNNNSNANMVVL------------- 240

Query: 241 TTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSM------ 300
            T+ KK N+KRGNTI+EGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSM      
Sbjct: 241 -TSAKKSNSKRGNTIMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMTSSSSS 300

Query: 301 --SASAKSR-SSKKKSNSI-----TKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLG 360
             S+S KSR +SKKK NS+     + FALGR  E D++ D  + KLERM+SFGNKRVKLG
Sbjct: 301 STSSSLKSRAASKKKINSLIQNNTSNFALGR-VEKDNSCDNEKSKLERMSSFGNKRVKLG 343

Query: 361 VVKARSLSSLLGQTNAMKNNNIVADNHATMQQQE 366
           VVKARSLSSLLGQTN +  + IV D   +MQQ +
Sbjct: 361 VVKARSLSSLLGQTNTI--SKIVGDE--SMQQHQ 343

[Close]

BLAST of Spo08274.1 vs. NCBI nr
Match: gi|731323821|ref|XP_010672640.1| (PREDICTED: homeobox protein 10 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 263.8 bits (673), Expect = 4.400e-67
Identity = 192/394 (48.73%), Postives = 230/394 (58.38%), Query Frame = 1


		  
Query: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS 60
           MRIR RKVPLPLSLLSPVPLSDP+L+SRSPVM     A Y+                 +S
Sbjct: 1   MRIRKRKVPLPLSLLSPVPLSDPNLFSRSPVMVTLQGADYTS----------------AS 60

Query: 61  DLHQHRGLDNNTNVGATRFEDGEQV-----QILSPAPILHQLSATTSAA--------GAS 120
           DL   R +  NT    TRFE G+        +LS A I    + T  AA         A 
Sbjct: 61  DLR--RLIVANTTDDTTRFEGGDDGIQASNDVLSNASITTTTTTTRGAAIAVADLAVAAD 120

Query: 121 ENNNGRLVFLSNNKDRVGRWCDGDKAIPLKKRRGFGFNN--TSFAENSSTRITTDEDEDE 180
           ++NN  L+ LSNNK   GRWCDGDKAIPLKKRRG  FNN      ++SST +        
Sbjct: 121 DDNNNGLLSLSNNK---GRWCDGDKAIPLKKRRGISFNNDFVEIEQHSSTIMV------- 180

Query: 181 DEDEDEDEDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAPPAPAPAPAPAPA 240
                +D+  + AT     +   + + I+DD         + + VV              
Sbjct: 181 -----DDKKLNAATLTKRNLKEDEQSTIHDDNNNNNNNNSNANMVVL------------- 240

Query: 241 TTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSM------ 300
            T+ KK N+KRGNTI+EGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSM      
Sbjct: 241 -TSAKKSNSKRGNTIMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMTSSSSS 300

Query: 301 --SASAKSR-SSKKKSNSI-----TKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLG 360
             S+S KSR +SKKK NS+     + FALGR  E D++ D  + KLERM+SFGNKRVKLG
Sbjct: 301 STSSSLKSRAASKKKINSLIQNNTSNFALGR-VEKDNSCDNEKSKLERMSSFGNKRVKLG 342

Query: 361 VVKARSLSSLLGQTNAMKNNNIVADNHATMQQQE 366
           VVKARSLSSLLGQTN +  + IV D   +MQQ +
Sbjct: 361 VVKARSLSSLLGQTNTI--SKIVGDE--SMQQHQ 342

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BLAST of Spo08274.1 vs. NCBI nr
Match: gi|802750386|ref|XP_012087782.1| (PREDICTED: uncharacterized protein LOC105646530 [Jatropha curcas])

HSP 1 Score: 156.8 bits (395), Expect = 7.600e-35
Identity = 139/373 (37.27%), Postives = 190/373 (50.94%), Query Frame = 1


		  
Query: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQ---DVATYSPEPPPSPNDLTTPTSW 60
           MRIR RKVP PLS LSPVPLSDP+L  RSPV+ +Q   D A Y    P S N      + 
Sbjct: 1   MRIRKRKVPFPLSSLSPVPLSDPNL-RRSPVVQLQLEDDTAAYFN--PSSSNPPIGDGNN 60

Query: 61  PSSDLHQHRGLDNNTNVGATRFEDGEQVQILSPAPILHQLSATTSAAGASENNNGRLVFL 120
           P  +  +    D+  + G     DGE         + +  + T             +VF 
Sbjct: 61  PYQEEVKKEAKDSPKDEGG---RDGETSNYTRRGSLFNAETET------------EMVFQ 120

Query: 121 -SNNKDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITTDEDEDEDEDEDEDEDDD 180
            SN+  + GRWC+G+KA PLKKRRG                  + +  + E+E +++   
Sbjct: 121 ESNSSHQDGRWCEGEKAFPLKKRRG------------------NLERSKQEEETKEKKMK 180

Query: 181 TATTATTEMIIMKWNNINDDE-EEKQAVKDDKDAVVAPPAPAPAPAPAPATTTVKKGNAK 240
           T      ++     NN N+ E EE++ +K+                    T+T KK    
Sbjct: 181 TKMNKKCQLQHNSDNNNNNQEIEEEKEIKESN------------------TSTSKK--KV 240

Query: 241 RGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMS-----ASAKSRSSKK 300
           RG  ++EGSRCSRVNGRGWRCCQ TLVGYSLCEHHLGKGRLRSM+     + A S + K 
Sbjct: 241 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSMASSAAKKA 300

Query: 301 KSNSITKFALGRDEESDHTVDV----REKKLERMNSFGNKRVKLGVVKARSLSSLLGQTN 359
            S +++      D+E    V++    +    ++  +   K++KLGVVKARS+SSLLGQ N
Sbjct: 301 SSCALSPLPPQEDKERKDMVELDGEDKGNDDKKPLTISKKKMKLGVVKARSISSLLGQAN 317

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BLAST of Spo08274.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RNF1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_047050 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 5.800e-199
Identity = 372/389 (95.63%), Postives = 372/389 (95.63%), Query Frame = 1


		  
Query: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS 60
           MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS
Sbjct: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS 60

Query: 61  DLHQHRGLDNNTNVGATRFEDGEQVQILSPAPILHQLSATTSAAGASENNNGRLVFLSNN 120
           DLHQHRGLDNNTNVGATRFEDGEQVQI SPAPILHQLSATTSAAGASENNNGRLVFLSNN
Sbjct: 61  DLHQHRGLDNNTNVGATRFEDGEQVQISSPAPILHQLSATTSAAGASENNNGRLVFLSNN 120

Query: 121 KDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITT--------DEDEDEDEDEDED 180
           KDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITT        DEDEDEDEDEDED
Sbjct: 121 KDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITTDEDEDEDEDEDEDEDEDEDED 180

Query: 181 EDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAP--------PAPAPAPAPAP 240
           EDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAP        PAPAPAPAPAP
Sbjct: 181 EDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAPPAPAPAPAPAPAPAPAPAP 240

Query: 241 ATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMSASAK 300
           ATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMSASAK
Sbjct: 241 ATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMSASAK 300

Query: 301 SRSSKKKSNSITKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLGVVKARSLSSLLGQ 360
           SRSSKKKSNSITKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLGVVKARSLSSLLGQ
Sbjct: 301 SRSSKKKSNSITKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLGVVKARSLSSLLGQ 360

Query: 361 TNAMKNNNIVADNHATMQQQEKISNLDYQ 374
           TNAMKNNNIVADNHATMQQQEKISNLDYQ
Sbjct: 361 TNAMKNNNIVADNHATMQQQEKISNLDYQ 389

[Close]

BLAST of Spo08274.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S0W5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_012940 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 4.500e-119
Identity = 266/361 (73.68%), Postives = 277/361 (76.73%), Query Frame = 1


		  
Query: 32  MPVQDVATYSPEPPPSP-----NDLTTPTSWPSSDLHQHRGLDNNTNVGATRFEDGEQVQ 91
           MPVQDVATY  EPPP P     +  TTP SWPSSDLHQHR LDN TNVGATRFED E VQ
Sbjct: 1   MPVQDVATYLAEPPPLPPPPSSDHFTTPPSWPSSDLHQHRRLDN-TNVGATRFEDVEGVQ 60

Query: 92  ILSPAPILHQLSATTSAAGASENNN-GRLVFLSNNKDRVGRWCDGDKAIPLKKRR----- 151
           I S APILHQ+S TT AAGASENNN GRL+FLSNNKDRVGRWCDGDKAIPLKKRR     
Sbjct: 61  ISSTAPILHQVSPTTRAAGASENNNNGRLLFLSNNKDRVGRWCDGDKAIPLKKRRGFGFG 120

Query: 152 -GFGFNNTSFAENSSTRITTDEDEDEDEDEDEDEDDDTATTATTEMIIMKWNNINDDEEE 211
            GFGFNNT+FAENSST ITT          DED DD T T+  TEMIIMK N+INDD +E
Sbjct: 121 FGFGFNNTTFAENSSTIITT----------DEDGDDTTTTSTITEMIIMKCNDINDDADE 180

Query: 212 KQAVKDDKDAVVAPPAPAPAPAPAPATTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQP 271
           KQ      DAVV  P P P PA A A  +VKKGN KRGNTILEGSRCSRVNGRGWRCCQP
Sbjct: 181 KQ------DAVVVAPPPPPGPA-AAAAASVKKGNGKRGNTILEGSRCSRVNGRGWRCCQP 240

Query: 272 TLVGYSLCEHHLGKGRLRSM-SASAKSRSSKKKSNS---ITKFALGRDEE-SDHTV-DVR 331
           TLVGYSLCEHHLGKGRLRSM SASAKSRSSK K  S    T+FA+GRDEE S HTV DVR
Sbjct: 241 TLVGYSLCEHHLGKGRLRSMSSASAKSRSSKNKKKSHSTTTEFAIGRDEERSHHTVDDVR 300

Query: 332 E-KKLERMNSFGNKRVKLGVVKARSLSSLLGQTNAMKNNNIVADNHATMQQQEKISNLDY 374
           E KKLERMNSFGNKRVKLGVVKARSLSSLLGQTN          NHA+MQQ E ISNLDY
Sbjct: 301 EKKKLERMNSFGNKRVKLGVVKARSLSSLLGQTN----------NHASMQQHENISNLDY 333

[Close]

BLAST of Spo08274.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CTB3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g060030 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 3.100e-67
Identity = 192/394 (48.73%), Postives = 230/394 (58.38%), Query Frame = 1


		  
Query: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQDVATYSPEPPPSPNDLTTPTSWPSS 60
           MRIR RKVPLPLSLLSPVPLSDP+L+SRSPVM     A Y+                 +S
Sbjct: 1   MRIRKRKVPLPLSLLSPVPLSDPNLFSRSPVMVTLQGADYTS----------------AS 60

Query: 61  DLHQHRGLDNNTNVGATRFEDGEQV-----QILSPAPILHQLSATTSAA--------GAS 120
           DL   R +  NT    TRFE G+        +LS A I    + T  AA         A 
Sbjct: 61  DLR--RLIVANTTDDTTRFEGGDDGIQASNDVLSNASITTTTTTTRGAAIAVADLAVAAD 120

Query: 121 ENNNGRLVFLSNNKDRVGRWCDGDKAIPLKKRRGFGFNN--TSFAENSSTRITTDEDEDE 180
           ++NN  L+ LSNNK   GRWCDGDKAIPLKKRRG  FNN      ++SST +        
Sbjct: 121 DDNNNGLLSLSNNK---GRWCDGDKAIPLKKRRGISFNNDFVEIEQHSSTIMV------- 180

Query: 181 DEDEDEDEDDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAPPAPAPAPAPAPA 240
                +D+  + AT     +   + + I+DD         + + VV              
Sbjct: 181 -----DDKKLNAATLTKRNLKEDEQSTIHDDNNNNNNNNSNANMVVL------------- 240

Query: 241 TTTVKKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSM------ 300
            T+ KK N+KRGNTI+EGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSM      
Sbjct: 241 -TSAKKSNSKRGNTIMEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMTSSSSS 300

Query: 301 --SASAKSR-SSKKKSNSI-----TKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLG 360
             S+S KSR +SKKK NS+     + FALGR  E D++ D  + KLERM+SFGNKRVKLG
Sbjct: 301 STSSSLKSRAASKKKINSLIQNNTSNFALGR-VEKDNSCDNEKSKLERMSSFGNKRVKLG 342

Query: 361 VVKARSLSSLLGQTNAMKNNNIVADNHATMQQQE 366
           VVKARSLSSLLGQTN +  + IV D   +MQQ +
Sbjct: 361 VVKARSLSSLLGQTNTI--SKIVGDE--SMQQHQ 342

[Close]

BLAST of Spo08274.1 vs. UniProtKB/TrEMBL
Match: A0A067JP86_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25554 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.300e-35
Identity = 139/373 (37.27%), Postives = 190/373 (50.94%), Query Frame = 1


		  
Query: 1   MRIRNRKVPLPLSLLSPVPLSDPHLYSRSPVMPVQ---DVATYSPEPPPSPNDLTTPTSW 60
           MRIR RKVP PLS LSPVPLSDP+L  RSPV+ +Q   D A Y    P S N      + 
Sbjct: 1   MRIRKRKVPFPLSSLSPVPLSDPNL-RRSPVVQLQLEDDTAAYFN--PSSSNPPIGDGNN 60

Query: 61  PSSDLHQHRGLDNNTNVGATRFEDGEQVQILSPAPILHQLSATTSAAGASENNNGRLVFL 120
           P  +  +    D+  + G     DGE         + +  + T             +VF 
Sbjct: 61  PYQEEVKKEAKDSPKDEGG---RDGETSNYTRRGSLFNAETET------------EMVFQ 120

Query: 121 -SNNKDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITTDEDEDEDEDEDEDEDDD 180
            SN+  + GRWC+G+KA PLKKRRG                  + +  + E+E +++   
Sbjct: 121 ESNSSHQDGRWCEGEKAFPLKKRRG------------------NLERSKQEEETKEKKMK 180

Query: 181 TATTATTEMIIMKWNNINDDE-EEKQAVKDDKDAVVAPPAPAPAPAPAPATTTVKKGNAK 240
           T      ++     NN N+ E EE++ +K+                    T+T KK    
Sbjct: 181 TKMNKKCQLQHNSDNNNNNQEIEEEKEIKESN------------------TSTSKK--KV 240

Query: 241 RGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMS-----ASAKSRSSKK 300
           RG  ++EGSRCSRVNGRGWRCCQ TLVGYSLCEHHLGKGRLRSM+     + A S + K 
Sbjct: 241 RGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSMASSAAKKA 300

Query: 301 KSNSITKFALGRDEESDHTVDV----REKKLERMNSFGNKRVKLGVVKARSLSSLLGQTN 359
            S +++      D+E    V++    +    ++  +   K++KLGVVKARS+SSLLGQ N
Sbjct: 301 SSCALSPLPPQEDKERKDMVELDGEDKGNDDKKPLTISKKKMKLGVVKARSISSLLGQAN 317

[Close]

BLAST of Spo08274.1 vs. UniProtKB/TrEMBL
Match: V4UU39_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012160mg PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.900e-32
Identity = 137/382 (35.86%), Postives = 189/382 (49.48%), Query Frame = 1


		  
Query: 1   MRIRNRKVPLPLSLLSPVPLS-DPHLYSRSPVMPVQDVATYSPEPPPS-PNDLTTPTSWP 60
           MRIR R+VPLPLS LSP+P+S DPH Y+ SPV+ +        +P  + P       S P
Sbjct: 1   MRIRKRQVPLPLSSLSPIPISSDPH-YNGSPVVQLHP----GHDPHQNLPQQADAVCSQP 60

Query: 61  SSDLHQHRGLDN-----NTNVGATRFEDGEQVQILSPAPILHQLSATTSAAGASENNNGR 120
           S   +Q  G  N     + +      E+GE+             S   S  GA     G 
Sbjct: 61  SDHSNQPIGSGNTLDQMDKDCLVLEDENGEKSDD----------SRKNSILGAEIAAAGV 120

Query: 121 LVFLSNNKDRVGRWCDGDKAIPLKKRRGFGFNNTSFAENSSTRITTDEDEDEDEDEDEDE 180
           L  LS++   VGRW +G+KA PLKKR     N+    +   T++   +    D+ E  ++
Sbjct: 121 LSQLSSSHHVVGRWREGEKAFPLKKRSSRRENDEDNFKKMKTKLNNKKFAGNDQQEQGEQ 180

Query: 181 DDDTATTATTEMIIMKWNNINDDEEEKQAVKDDKDAVVAPPAPAPAPAPAPATTTVKKGN 240
           +++                  ++EEE++  K+  D                 +T+ K   
Sbjct: 181 EEE------------------EEEEEREVTKESVDN---------------NSTSSKNKR 240

Query: 241 AKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSM------SASAKSRS 300
             +G  I+EGSRCSRVNGRGWRCCQ TLVGYSLCEHHLGKGRLRSM      S++  S +
Sbjct: 241 GTKGGAIMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSNLGSSA 300

Query: 301 SKKKSNSITKFALGR--DEESDHTVDVREKKLER----------MNSFGNKRVKLGVVKA 358
           S  KS + T  A  +     S  T  ++E K+++          +     KRVKLG+VKA
Sbjct: 301 SSNKSTATTAAATNKLAISSSPSTTTLQESKMKQELVSDDDEKPLMMSAKKRVKLGMVKA 332

[Close]

BLAST of Spo08274.1 vs. TAIR (Arabidopsis)
Match: AT2G42040.1 (WRC (InterPro:IPR014977))

HSP 1 Score: 110.9 bits (276), Expect = 1.700e-24
Identity = 66/117 (56.41%), Postives = 74/117 (63.25%), Query Frame = 1


		  
Query: 230 KKGNAKRGNTILEGSRCSRVNGRGWRCCQPTLVGYSLCEHHLGKGRLRSMSASAKSRSSK 289
           KK   K G  + EGSRCSRVNGRGWRCCQ TLVGYSLCEHHLGKGR+RSM+ S   R  +
Sbjct: 153 KKKAKKSGGGLEEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRVRSMNKSGGGRGGE 212

Query: 290 KKSNSITKFALGRDEESDHTVDVREKKLERMNSFGNKRVKLGVVKARSLSSLLGQTN 347
           KK+                 V V  KK         KRVKLG+VKARS+SSLLGQT+
Sbjct: 213 KKA-----------------VVVEVKK---------KRVKLGMVKARSISSLLGQTS 243

The following BLAST results are available for this feature:

BLAST of Spo08274.1 vs. NCBI nr
BLAST of Spo08274.1 vs. UniProtKB/TrEMBL
BLAST of Spo08274.1 vs. ExPASy Swiss-Prot
BLAST of Spo08274.1 vs. TAIR (Arabidopsis)

BLAST of Spo08274.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902228162\|gb\|KNA21003.1\|	8.3e-199	95.6	hypothetical protein SOVF_0470...	[more]
gi\|902237332\|gb\|KNA24757.1\|	6.5e-119	73.6	hypothetical protein SOVF_0129...	[more]
gi\|731323819\|ref\|XP_010672639.1\|	8.9e-68	48.9	PREDICTED: homeobox protein 10...	[more]
gi\|731323821\|ref\|XP_010672640.1\|	4.4e-67	48.7	PREDICTED: homeobox protein 10...	[more]
gi\|802750386\|ref\|XP_012087782.1\|	7.6e-35	37.2	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo08274.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RNF1_SPIOL	5.8e-199	95.6	Uncharacterized protein OS=Spi...	[more]
A0A0K9S0W5_SPIOL	4.5e-119	73.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8CTB3_BETVU	3.1e-67	48.7	Uncharacterized protein OS=Bet...	[more]
A0A067JP86_JATCU	5.3e-35	37.2	Uncharacterized protein OS=Jat...	[more]
V4UU39_9ROSI	1.9e-32	35.8	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo08274.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo08274.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G42040.1	1.7e-24	56.4	WRC (InterPro:IPR014977)	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 242..280 score: 1.8
IPR014977	WRC domain	PROFILE	PS51667	WRC	coord: 240..285 score: 20
None	No IPR available	PANTHER	PTHR31602:SF19	SUBFAMILY NOT NAMED	coord: 236..279 score: 1.3

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus