Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTAGTATTTTTTTGGGTACATTCATATAATATTTTAAAATATTCCCCCCCTTTGCTTATTTATAGAGATGAATGAGCAAAAATAAGAATTCAAAACAAATCAAAACGAGTAATAATACATTTGTGTTGATCAAGTTCCAAAATGGGAAGAGTACCAATTGTGAATGAAAACTATCGGAGGGTAATTGAGGCAGCTCGTCGAGACCTCCACCGTTCTCTCGTCCAGGACAACAACAACTCTGCTCCTATCCTCCTCCGCCTCTCGTAACTTCTCTCTCTTTATTTAACATACCACGATATTTCTTTATTTATCTCTTAAACTGACTAATTTTACAAGTCTTTGGTAGTTTAGTACCATATTATTGACAAAGTGTGTTGGACTTATTTCAGACAAAATAAGTTCATGAAAAAAAAAAATCATATATTATGTTTATTATATACAAAAATAACTTCTTCTTTTTTTTCAGTTTAGATAAACCAGATAATTTCACATAAATTTAGATAATATAAATTCACTCAAAATAAGTCGAATATACCAAAAAAAATATCGAATATAATGGAGTCTAACTGTACTAATGAAATCTTAACCTTTTGGTTAAGACCGAGGGCATGTGTACAAATCTACAATAAATGACAGGTTCAAATTTTTCCAAACCCATTTGTAATTTGTATTGCCGTTATACCTCATTCGTACCAAAAAATAATATTATTGACTGCATGCTACTCCGTATTTGTATTCCGACTCCGTAGTATTTTACAATATCAATTTAATTTTCACAGATACTAACCCAACTATTTAAACGTATGTGACAAAATCGATGTGTTTTTTATTTAAGGAAACGGCTCCGGCCACTAGCTTTCATTTTTTCATGATTAAGTAAATAAAAATCAGATGCAGTTACATCCTCTACTAAGGTTGGACAATCCCCTATCCACACTTGTGTAGGGAACCCGAGTGGGCTATTATATTTCCAAAGAGTAACTTGGTTTTGGTGTTGTAGATTTCACGATGCAGTGGACTATGATGCAGCAACAAAACGAGGTGGTGCAAATGGTTCAGTTAGGTTAGCTCAGGAGTTGAACCGCACCCCAAACAAGGGCATAGAAACTGCTGTTAGATTTTGTGGTGAGCTTATCAATTTTACTACATTTTTTGATGGAAAATTCTCTACTTATTAAGCACAAATACATTTTCTGGGTAATAATTATTTCGTGCAAAGTCTACACTAGCTATTTGGTACTAAACGTCTATCTATTTCACCAGCAAGTCTACAACTACTATTTGGAGGATAACTTATTGTTTTTTTTTATTTTCCCCCTTTGTGCAGAGCCGATCAAGCGTAGACACCCTGATATTACATATGCTGACCTTTATCAGGTAAACTATGCATCTTTAAGGATGCATCTAAGCTAGGGAGAAGCCATATTTTGATTGTTAAGACGAGTCTACCAAGTGGGCTTAGAGGGGCAGACGAGTAAAAAACTAGGAAATTTGTTGAAATATTATCTTTAAGTGTAGAGGTTTTGTGAATTGCTATATTTTAAAAAACAATATTAAATTTTGCCGTTTAACTATCTTATAAGTTTAGTTATTTGACTAACAATGCCATTTGACGTATGTCGTTAATGTTTTTTGTCTGTGAACAAATCTATTTGACAAATCTATTTAATATACAAATGAACAAATATATTTAAAGAAATAGAAGAAATACTCGATGAAAAATATTACTCCCTTTGAATCTAAATGTTTTTCCATTTAGAAACTTGACACTATTCACAATAGAAGATAATCTTATGAATTACGTTCAATATATAAGAAAAAACATAGTCATGTGGGATCTTGTTTGATTCTCTCCACGAGTACTTTAACAATATGAAAATTTAATAATTTTTAATAATACGTTACTAGAGATATTAACGATGTAAAATGTGCATTGACATGTGTGTCAAAGAAAAATGGGAAAAACATTTAGATTCGGAGGGAGTATCGGAAAACAATTTACGAAATCACCAAACTTGAAGGTATTGTTTCACAAAATTATTTTAATTTTCCGGGATAACTCGGCCTTTTAAATTCAACTGCAGTCCAAAAAGAGATACAATAAGATTTACTTTTTGAAACTAGAGATAAAATAAGGGATATTAAATTATAAAAAGTTGATATTTTGAGAACACGCATTGAAACAAATCTAACAAAATCTCACATTATTATGTTTTATCTAACATATAAATCATCAACAATTGTTAAAGTAAAATATGTGAATAGTGTAAAAAGTTTAAACGTTGTGAGTATTTCTAAACGAGGAATTACGAGTAGGTTTTTTCCAACACAAAATATATTTTGAACTTTCCAACAAAAAAAATTGATTTTTGTTGTTCATTACTGGTTTTCTCAGCTAGCTGGAATTGTTGCAGTAGAAGTAACCGGAGGTCCTGCTATTGATTTTGTTCCAGGTCGAGCTGTGAGTATTGCTAACTTTGTAATGCTCATGCACAATATTTTAGGCTTTTTGTGACAAATATATAAACAGCATATATATACGGAGTATGTGCGATGTGCCTAATAATTGTCATCTTTCAAATAGGATGCTGATGTTGCAGACCAAGACAATATCCCAAACCCTAGAAGAGGTATCCACTAGTTAATATTCTTACACAATAGGATAATATTAGCAATATCTAACCCATGTGATTTTATGGGTTTTAGGAGCGGATCATCTGAGAACCGTATTTTATCGAATGGGCCTCAATGACAAGGATATCGTTGTACTTTCTGGGGCCCACGCACTGGTGAGATTGACTTTGCTTTGAATTTTAATTTGGTTGCACTGAAGCTGTGCAATAATAAAAAGTAAACTAGTGGAAGTATAAATTTAAAAAAAAATACTTATAGGTTTGCGTTTTGATATGCATATATGTTTGGAATGTGAAGGGTGGAGCACACAAGGACAGATCAGGGTTTGACGGCGATTTCACTCGAAACCCTTTGACGTTTGATAACTCCTACTTTGTGTAAGAATATTAATTAGATATTTGTATGTAAGAATAAGTTGTGTATAATATGGTTCACAGTAAGATCGATAATATAACGAGTCTAAAACAAAGTTTCATATCTATTGTAAATTTGTAATAGCTATCTTATCGTGTACTGTGTGTATTTGTATGATCAGAGAGCTACTGAGGGGTGATACTCCAGGGTTGGTGAAATTTCCAACAGATAAGGCTCTCTTAACTGACCCTCGTTTCCGTCCCTTTGTTGATCTCTACGCTAGGGTATGTCCTCTTACTTAATATATATATGCACAAATTAATGACCTTAATTTAATTAAACTATATTAGCTAGCTTACCAAGCTTACTTGGTGGAGATGGTGACATATGGTACTTACCTACCTTGTGTCTTGAAAGTCACAATTAACAAGACAATATATACTTGATAATAACTAACAAGTGTAGTAGTAATGTTTAAACTAACAAGCAGCAAATGACGTACAGGATCAAAGAGCATTCTTCAGAGATTATGCAGAATCACACAAGAAGATGTCCCTGCTAGGGCTTAATCATCCGGAATCCAACCTATATGAAAGTAACAGCTGCAGCGACGAGGTTGAGTGTGGTGCTCAATCCTACGTTGTCCAAAACGGAGGCTGTCCAATGCAATACGGATATGCTCGACCCTATGCAGTTGGAAATGGTTGCTGCCCAGGCGGCTACTGATACATATAATATGCCCATATATACGGCTGTTAACTGTAACAGTCTACGTGACTGAGTGAGTACGTGATGGGAATTAATATCTTTGAGTTCATGTGATGGCCTCAAGAATAATTAAGTTGTAACGTTTTACTTTGTTATATATACTCGTTTATTATGTAATTAAAGTTGTAGTAGTAACGGGGAAACTGTACGTGACAGGAACTTGCTTGGAGAAAATCAGCCTTCCTGCCCTCCCTGCATGCTATAAATAAATAACAAACACTAATATATTTTTAGTTTTATATTTGCTTCACTTTGTTTTTCCATGCATCTTTTTGCATGCCTAATTGATATCGTTAATCATGTAAAGTCTTTTATTTTGATTATTAGTTAAGCTTCGATCTTTAGTAGAAAATTTGTTATAGTCCTATAGATGGGTATACGTACCTC CAGTAGTATTTTTTTGGGTACATTCATATAATATTTTAAAATATTCCCCCCCTTTGCTTATTTATAGAGATGAATGAGCAAAAATAAGAATTCAAAACAAATCAAAACGAGTAATAATACATTTGTGTTGATCAAGTTCCAAAATGGGAAGAGTACCAATTGTGAATGAAAACTATCGGAGGGTAATTGAGGCAGCTCGTCGAGACCTCCACCGTTCTCTCGTCCAGGACAACAACAACTCTGCTCCTATCCTCCTCCGCCTCTCATTTCACGATGCAGTGGACTATGATGCAGCAACAAAACGAGGTGGTGCAAATGGTTCAGTTAGGTTAGCTCAGGAGTTGAACCGCACCCCAAACAAGGGCATAGAAACTGCTGTTAGATTTTGTGAGCCGATCAAGCGTAGACACCCTGATATTACATATGCTGACCTTTATCAGCTAGCTGGAATTGTTGCAGTAGAAGTAACCGGAGGTCCTGCTATTGATTTTGTTCCAGGTCGAGCTGATGCTGATGTTGCAGACCAAGACAATATCCCAAACCCTAGAAGAGGAGCGGATCATCTGAGAACCGTATTTTATCGAATGGGCCTCAATGACAAGGATATCGTTGTACTTTCTGGGGCCCACGCACTGGGTGGAGCACACAAGGACAGATCAGGGTTTGACGGCGATTTCACTCGAAACCCTTTGACGTTTGATAACTCCTACTTTGTAGAGCTACTGAGGGGTGATACTCCAGGGTTGGTGAAATTTCCAACAGATAAGGCTCTCTTAACTGACCCTCGTTTCCGTCCCTTTGTTGATCTCTACGCTAGGGATCAAAGAGCATTCTTCAGAGATTATGCAGAATCACACAAGAAGATGTCCCTGCTAGGGCTTAATCATCCGGAATCCAACCTATATGAAAGTAACAGCTGCAGCGACGAGGTTGAGTGTGGTGCTCAATCCTACGTTGTCCAAAACGGAGGCTGTCCAATGCAATACGGATATGCTCGACCCTATGCAGTTGGAAATGGTTGCTGCCCAGGCGGCTACTGATACATATAATATGCCCATATATACGGCTGTTAACTGTAACAGTCTACGTGACTGAGTGAGTACGTGATGGGAATTAATATCTTTGAGTTCATGTGATGGCCTCAAGAATAATTAAGTTGTAACGTTTTACTTTGTTATATATACTCGTTTATTATGTAATTAAAGTTGTAGTAGTAACGGGGAAACTGTACGTGACAGGAACTTGCTTGGAGAAAATCAGCCTTCCTGCCCTCCCTGCATGCTATAAATAAATAACAAACACTAATATATTTTTAGTTTTATATTTGCTTCACTTTGTTTTTCCATGCATCTTTTTGCATGCCTAATTGATATCGTTAATCATGTAAAGTCTTTTATTTTGATTATTAGTTAAGCTTCGATCTTTAGTAGAAAATTTGTTATAGTCCTATAGATGGGTATACGTACCTC ATGGGAAGAGTACCAATTGTGAATGAAAACTATCGGAGGGTAATTGAGGCAGCTCGTCGAGACCTCCACCGTTCTCTCGTCCAGGACAACAACAACTCTGCTCCTATCCTCCTCCGCCTCTCATTTCACGATGCAGTGGACTATGATGCAGCAACAAAACGAGGTGGTGCAAATGGTTCAGTTAGGTTAGCTCAGGAGTTGAACCGCACCCCAAACAAGGGCATAGAAACTGCTGTTAGATTTTGTGAGCCGATCAAGCGTAGACACCCTGATATTACATATGCTGACCTTTATCAGCTAGCTGGAATTGTTGCAGTAGAAGTAACCGGAGGTCCTGCTATTGATTTTGTTCCAGGTCGAGCTGATGCTGATGTTGCAGACCAAGACAATATCCCAAACCCTAGAAGAGGAGCGGATCATCTGAGAACCGTATTTTATCGAATGGGCCTCAATGACAAGGATATCGTTGTACTTTCTGGGGCCCACGCACTGGGTGGAGCACACAAGGACAGATCAGGGTTTGACGGCGATTTCACTCGAAACCCTTTGACGTTTGATAACTCCTACTTTGTAGAGCTACTGAGGGGTGATACTCCAGGGTTGGTGAAATTTCCAACAGATAAGGCTCTCTTAACTGACCCTCGTTTCCGTCCCTTTGTTGATCTCTACGCTAGGGATCAAAGAGCATTCTTCAGAGATTATGCAGAATCACACAAGAAGATGTCCCTGCTAGGGCTTAATCATCCGGAATCCAACCTATATGAAAGTAACAGCTGCAGCGACGAGGTTGAGTGTGGTGCTCAATCCTACGTTGTCCAAAACGGAGGCTGTCCAATGCAATACGGATATGCTCGACCCTATGCAGTTGGAAATGGTTGCTGCCCAGGCGGCTACTGA MGRVPIVNENYRRVIEAARRDLHRSLVQDNNNSAPILLRLSFHDAVDYDAATKRGGANGSVRLAQELNRTPNKGIETAVRFCEPIKRRHPDITYADLYQLAGIVAVEVTGGPAIDFVPGRADADVADQDNIPNPRRGADHLRTVFYRMGLNDKDIVVLSGAHALGGAHKDRSGFDGDFTRNPLTFDNSYFVELLRGDTPGLVKFPTDKALLTDPRFRPFVDLYARDQRAFFRDYAESHKKMSLLGLNHPESNLYESNSCSDEVECGAQSYVVQNGGCPMQYGYARPYAVGNGCCPGGY Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo08328.1 vs. NCBI nr
Match: gi|902219780|gb|KNA18404.1| (hypothetical protein SOVF_070820 [Spinacia oleracea]) HSP 1 Score: 617.1 bits (1590), Expect = 1.600e-173 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Spo08328.1 vs. NCBI nr
Match: gi|987701|dbj|BAA08535.1| (ascorbate peroxidase [Spinacia oleracea]) HSP 1 Score: 511.5 bits (1316), Expect = 9.700e-142 Identity = 253/260 (97.31%), Postives = 253/260 (97.31%), Query Frame = 1
BLAST of Spo08328.1 vs. NCBI nr
Match: gi|870858051|gb|KMT09577.1| (hypothetical protein BVRB_6g130330 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 483.4 bits (1243), Expect = 2.800e-133 Identity = 238/298 (79.87%), Postives = 258/298 (86.58%), Query Frame = 1
BLAST of Spo08328.1 vs. NCBI nr
Match: gi|870858054|gb|KMT09580.1| (hypothetical protein BVRB_6g130360 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 373.6 bits (958), Expect = 3.200e-100 Identity = 180/224 (80.36%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of Spo08328.1 vs. NCBI nr
Match: gi|3377755|gb|AAC28103.1| (ascorbate peroxidase [Mesembryanthemum crystallinum]) HSP 1 Score: 341.3 bits (874), Expect = 1.700e-90 Identity = 162/241 (67.22%), Postives = 198/241 (82.16%), Query Frame = 1
BLAST of Spo08328.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RHH7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_070820 PE=3 SV=1) HSP 1 Score: 617.1 bits (1590), Expect = 1.100e-173 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Spo08328.1 vs. UniProtKB/TrEMBL
Match: Q41371_SPIOL (Ascorbate peroxidase OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 511.5 bits (1316), Expect = 6.800e-142 Identity = 253/260 (97.31%), Postives = 253/260 (97.31%), Query Frame = 1
BLAST of Spo08328.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C7N2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130330 PE=3 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 2.000e-133 Identity = 238/298 (79.87%), Postives = 258/298 (86.58%), Query Frame = 1
BLAST of Spo08328.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C797_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g130360 PE=3 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 2.200e-100 Identity = 180/224 (80.36%), Postives = 194/224 (86.61%), Query Frame = 1
BLAST of Spo08328.1 vs. UniProtKB/TrEMBL
Match: O81604_MESCR (Ascorbate peroxidase OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 341.3 bits (874), Expect = 1.200e-90 Identity = 162/241 (67.22%), Postives = 198/241 (82.16%), Query Frame = 1
BLAST of Spo08328.1 vs. ExPASy Swiss-Prot
Match: APX5_ARATH (L-ascorbate peroxidase 5, peroxisomal OS=Arabidopsis thaliana GN=APX5 PE=1 SV=2) HSP 1 Score: 316.6 bits (810), Expect = 2.900e-85 Identity = 154/243 (63.37%), Postives = 187/243 (76.95%), Query Frame = 1
BLAST of Spo08328.1 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 2.300e-82 Identity = 150/252 (59.52%), Postives = 191/252 (75.79%), Query Frame = 1
BLAST of Spo08328.1 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=3 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 5.100e-82 Identity = 149/252 (59.13%), Postives = 191/252 (75.79%), Query Frame = 1
BLAST of Spo08328.1 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 3.600e-80 Identity = 154/280 (55.00%), Postives = 196/280 (70.00%), Query Frame = 1
BLAST of Spo08328.1 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 1.200e-78 Identity = 142/242 (58.68%), Postives = 184/242 (76.03%), Query Frame = 1
BLAST of Spo08328.1 vs. TAIR (Arabidopsis)
Match: AT4G35970.1 (ascorbate peroxidase 5) HSP 1 Score: 316.6 bits (810), Expect = 1.600e-86 Identity = 154/243 (63.37%), Postives = 187/243 (76.95%), Query Frame = 1
BLAST of Spo08328.1 vs. TAIR (Arabidopsis)
Match: AT4G35000.1 (ascorbate peroxidase 3) HSP 1 Score: 299.7 bits (766), Expect = 2.000e-81 Identity = 154/280 (55.00%), Postives = 196/280 (70.00%), Query Frame = 1
BLAST of Spo08328.1 vs. TAIR (Arabidopsis)
Match: AT3G09640.1 (ascorbate peroxidase 2) HSP 1 Score: 260.8 bits (665), Expect = 1.100e-69 Identity = 131/247 (53.04%), Postives = 167/247 (67.61%), Query Frame = 1
BLAST of Spo08328.1 vs. TAIR (Arabidopsis)
Match: AT1G07890.3 (ascorbate peroxidase 1) HSP 1 Score: 247.7 bits (631), Expect = 9.200e-66 Identity = 127/243 (52.26%), Postives = 167/243 (68.72%), Query Frame = 1
BLAST of Spo08328.1 vs. TAIR (Arabidopsis)
Match: AT1G77490.1 (thylakoidal ascorbate peroxidase) HSP 1 Score: 186.8 bits (473), Expect = 1.900e-47 Identity = 108/250 (43.20%), Postives = 143/250 (57.20%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08328.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08328.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08328.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08328.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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