Spo08414.1 (mRNA) | SpinachBase

Overview


Name	Spo08414.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Receptor protein kinase, putative
Location	SpoScf_01585 : 101988 .. 102811 (-)
Sequence length	702

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAACAATTTTCAAAGAATCTTAGGAAAAGGAGGATTTGGAGCTGTTTCTTACGGCTCTTTAGGAGATAATACTAAAGTTGCAGTCAAGATACTCAATCTACCATCTGCTCTGATATCATTTCGAATTGAGGTTAGTTAATCCACACCAATTAAACTTTTTTAAAACCTACCCGTAAGTCTTGAACCTGAATTCAGGCGCATACATTAGTATATCTGTGATTCTGATTTTTCCTCTTATTAAATGTTTGACAGGCAGAACTGTTGATGAGAGTTCACCAAAAGAATTTGGTTTCTCTTGTTGGATATTGCGATGAAGGAGAGAGCACTACACTTATCTACGAATACATGCCTAACGGTAACCTGCAAGACCATTTATCAGGTACTGCTGATGTACTGCTGCTGTTGTTGCTCTGCTACTGCTTCTGTACTGCTTCTGCTATACTGTTGTTGTTGTGGGTATGCTCTTCTATTTATTGCTCTGTTCTTCTCTTCTGGTCTGCTTTTCCCGGCTTTTTACTACTCTGCTAATGCTTCTACACTGCTCTTTATTGCTGATGTAGTTGCTGCTGCAGTTGGCTCTATACTGCTGTTGTTGTAGCTGCTGTAGTGGGCTGTATCTCTATTATATAAGCCAGCTCCTGAGGTCATTTTTGTAAATTAACTTTTCGTGACCCCCACTAAATTTACAGAAATACCCCCCCNAAAATACCCCCCCCCCCCCCCGGTTTTACTTTTTGATCTACCTTACCAACCTAATTTGCCTGGCTTAATAAAACGCCCAAAAACGTGTATTACGGCCCATAGGTTGAACAATTGAAT

mRNA sequence

ATGACCAACAATTTTCAAAGAATCTTAGGAAAAGGAGGATTTGGAGCTGTTTCTTACGGCTCTTTAGGAGATAATACTAAAGTTGCAGTCAAGATACTCAATCTACCATCTGCTCTGATATCATTTCGAATTGAGGCAGAACTGTTGATGAGAGTTCACCAAAAGAATTTGGTTTCTCTTGTTGGATATTGCGATGAAGGAGAGAGCACTACACTTATCTACGAATACATGCCTAACGGTAACCTGCAAGACCATTTATCAGGTACTGCTGATGTACTGCTGCTGTTGTTGCTCTGCTACTGCTTCTGTACTGCTTCTGCTATACTGTTGTTGTTGTGGGTATGCTCTTCTATTTATTGCTCTGTTCTTCTCTTCTGGTCTGCTTTTCCCGGCTTTTTACTACTCTGCTAATGCTTCTACACTGCTCTTTATTGCTGATGTAGTTGCTGCTGCAGTTGGCTCTATACTGCTGTTGTTGTAGCTGCTGTAGTGGGCTGTATCTCTATTATATAAGCCAGCTCCTGAGGTCATTTTTGTAAATTAACTTTTCGTGACCCCCACTAAATTTACAGAAATACCCCCCCNAAAATACCCCCCCCCCCCCCCGGTTTTACTTTTTGATCTACCTTACCAACCTAATTTGCCTGGCTTAATAAAACGCCCAAAAACGTGTATTACGGCCCATAGGTTGAACAATTGAAT

Coding sequence (CDS)

ATGACCAACAATTTTCAAAGAATCTTAGGAAAAGGAGGATTTGGAGCTGTTTCTTACGGCTCTTTAGGAGATAATACTAAAGTTGCAGTCAAGATACTCAATCTACCATCTGCTCTGATATCATTTCGAATTGAGGCAGAACTGTTGATGAGAGTTCACCAAAAGAATTTGGTTTCTCTTGTTGGATATTGCGATGAAGGAGAGAGCACTACACTTATCTACGAATACATGCCTAACGGTAACCTGCAAGACCATTTATCAGGTACTGCTGATGTACTGCTGCTGTTGTTGCTCTGCTACTGCTTCTGTACTGCTTCTGCTATACTGTTGTTGTTGTGGGTATGCTCTTCTATTTATTGCTCTGTTCTTCTCTTCTGGTCTGCTTTTCCCGGCTTTTTACTACTCTGCTAA

Protein sequence

MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSALISFRIEAELLMRVHQKNLVSLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLLLLLCYCFCTASAILLLLWVCSSIYCSVLLFWSAFPGFLLLC

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08414	Spo08414	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08414.1	Spo08414.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08414.1.CDS.2	Spo08414.1.CDS.2	CDS
Spo08414.1.CDS.1	Spo08414.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08414.1.utr3p.1	Spo08414.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08414.1.exon.2	Spo08414.1.exon.2	exon
Spo08414.1.exon.1	Spo08414.1.exon.1	exon

Homology

[Close]

BLAST of Spo08414.1 vs. NCBI nr
Match: gi|902186456|gb|KNA10685.1| (hypothetical protein SOVF_142000, partial [Spinacia oleracea])

HSP 1 Score: 156.0 bits (393), Expect = 4.700e-35
Identity = 75/88 (85.23%), Postives = 79/88 (89.77%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSALISFRIEAELLMRVHQKNLVSL 60
           MTNNF+RILGKGGFG V YGSLGDNT+VAVKILN PSAL SF+ EAELLMRVH KNLVSL
Sbjct: 365 MTNNFERILGKGGFGTVYYGSLGDNTQVAVKILNQPSALTSFQTEAELLMRVHHKNLVSL 424

Query: 61  VGYCDEGESTTLIYEYMPNGNLQDHLSG 89
           VGYCDE +S  LIYEYMPNGNLQDHLSG
Sbjct: 425 VGYCDEDDSIALIYEYMPNGNLQDHLSG 452

[Close]

BLAST of Spo08414.1 vs. NCBI nr
Match: gi|922506156|ref|XP_013589968.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51820 isoform X2 [Brassica oleracea var. oleracea])

HSP 1 Score: 122.9 bits (307), Expect = 4.400e-25
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V YG + D  +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 48  MTNNFQRILGKGGFGIVYYGFVNDTKQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 107

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
           +LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 108 NLVGYCDEGENMALIYEYMSNGDLKEHMSGTRNRFIL 144

[Close]

BLAST of Spo08414.1 vs. NCBI nr
Match: gi|674945563|emb|CDX87849.1| (BnaC06g09110D [Brassica napus])

HSP 1 Score: 122.9 bits (307), Expect = 4.400e-25
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V YG + D  +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 574 MTNNFQRILGKGGFGIVYYGFVNDTKQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 633

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
           +LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 634 NLVGYCDEGENMALIYEYMSNGDLKEHMSGTRNRFIL 670

[Close]

BLAST of Spo08414.1 vs. NCBI nr
Match: gi|922506153|ref|XP_013589967.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51820 isoform X1 [Brassica oleracea var. oleracea])

HSP 1 Score: 122.9 bits (307), Expect = 4.400e-25
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V YG + D  +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 574 MTNNFQRILGKGGFGIVYYGFVNDTKQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 633

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
           +LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 634 NLVGYCDEGENMALIYEYMSNGDLKEHMSGTRNRFIL 670

[Close]

BLAST of Spo08414.1 vs. NCBI nr
Match: gi|922554166|ref|XP_013605120.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51820 isoform X1 [Brassica oleracea var. oleracea])

HSP 1 Score: 120.2 bits (300), Expect = 2.900e-24
Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQR++GKGGFG V +G +    +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 574 MTNNFQRVIGKGGFGIVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 633

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
           SLVGYCDEGE+ TLIYEYM NG+L++H+SGT +  +L
Sbjct: 634 SLVGYCDEGENLTLIYEYMANGDLKEHMSGTRNRFIL 670

[Close]

BLAST of Spo08414.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QTV8_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_142000 PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.300e-35
Identity = 75/88 (85.23%), Postives = 79/88 (89.77%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSALISFRIEAELLMRVHQKNLVSL 60
           MTNNF+RILGKGGFG V YGSLGDNT+VAVKILN PSAL SF+ EAELLMRVH KNLVSL
Sbjct: 365 MTNNFERILGKGGFGTVYYGSLGDNTQVAVKILNQPSALTSFQTEAELLMRVHHKNLVSL 424

Query: 61  VGYCDEGESTTLIYEYMPNGNLQDHLSG 89
           VGYCDE +S  LIYEYMPNGNLQDHLSG
Sbjct: 425 VGYCDEDDSIALIYEYMPNGNLQDHLSG 452

[Close]

BLAST of Spo08414.1 vs. UniProtKB/TrEMBL
Match: A0A0D3CRJ3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.100e-25
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V YG + D  +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 574 MTNNFQRILGKGGFGIVYYGFVNDTKQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 633

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
           +LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 634 NLVGYCDEGENMALIYEYMSNGDLKEHMSGTRNRFIL 670

[Close]

BLAST of Spo08414.1 vs. UniProtKB/TrEMBL
Match: A0A078DHF1_BRANA (BnaC06g09110D protein OS=Brassica napus GN=BnaC06g09110D PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.100e-25
Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V YG + D  +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 574 MTNNFQRILGKGGFGIVYYGFVNDTKQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 633

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
           +LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 634 NLVGYCDEGENMALIYEYMSNGDLKEHMSGTRNRFIL 670

[Close]

BLAST of Spo08414.1 vs. UniProtKB/TrEMBL
Match: A0A078JR18_BRANA (BnaA05g35900D protein OS=Brassica napus GN=BnaA05g35900D PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.000e-24
Identity = 60/97 (61.86%), Postives = 74/97 (76.29%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V YG +    +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 554 MTNNFQRILGKGGFGIVYYGFVNGTKQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 613

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
           +LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 614 NLVGYCDEGENMALIYEYMSNGDLKEHMSGTRNRFIL 650

[Close]

BLAST of Spo08414.1 vs. UniProtKB/TrEMBL
Match: M4ENP4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.000e-24
Identity = 60/97 (61.86%), Postives = 74/97 (76.29%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V YG +    +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 550 MTNNFQRILGKGGFGIVYYGFVNGTKQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 609

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
           +LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 610 NLVGYCDEGENMALIYEYMSNGDLKEHMSGTRNRFIL 646

[Close]

BLAST of Spo08414.1 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.000e-25
Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V +G +    +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 576 MTNNFQRILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 635

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
            LVGYCDEG++  LIYEYM NG+L++H+SGT +  +L
Sbjct: 636 GLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFIL 672

[Close]

BLAST of Spo08414.1 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 4.400e-25
Identity = 56/90 (62.22%), Postives = 68/90 (75.56%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQ+ILGKGGFG V YGS+    +VAVK+L+  SA     F+ E ELL+RVH KNLV
Sbjct: 575 MTNNFQKILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLV 634

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSG 89
            LVGYC+EG+   LIYEYM NG+L +H+SG
Sbjct: 635 GLVGYCEEGDKLALIYEYMANGDLDEHMSG 664

[Close]

BLAST of Spo08414.1 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.800e-25
Identity = 54/90 (60.00%), Postives = 71/90 (78.89%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNF+R+LGKGGFG V +G++ +  +VAVK+L+  S+     F+ E ELL+RVH KNLV
Sbjct: 590 MTNNFERVLGKGGFGMVYHGTVNNTEQVAVKMLSHSSSQGYKEFKAEVELLLRVHHKNLV 649

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSG 89
            LVGYCDEGE+  LIYEYM NG+L++H+SG
Sbjct: 650 GLVGYCDEGENLALIYEYMANGDLREHMSG 679

[Close]

BLAST of Spo08414.1 vs. ExPASy Swiss-Prot
Match: Y5573_ARATH (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g04300 OS=Arabidopsis thaliana GN=At2g04300 PE=3 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 3.700e-24
Identity = 55/97 (56.70%), Postives = 73/97 (75.26%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNF++ILGKGGFG V +G++ D  +VAVK+L+  S+     F+ E ELL+RVH KNLV
Sbjct: 580 MTNNFEKILGKGGFGMVYHGTVNDAEQVAVKMLSPSSSQGYKEFKAEVELLLRVHHKNLV 639

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
            LVGYCDEGE+ +LIYEYM  G+L++H+ G   V +L
Sbjct: 640 GLVGYCDEGENLSLIYEYMAKGDLKEHMLGNQGVSIL 676

[Close]

BLAST of Spo08414.1 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.700e-24
Identity = 54/90 (60.00%), Postives = 69/90 (76.67%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           +TNNF+R LG+GGFG V +G++ DN +VAVK+L+  SA     F+ E +LL+RVH  NLV
Sbjct: 589 ITNNFERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLV 648

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSG 89
           +LVGYCDEG+   LIYEYM NGNL+ HLSG
Sbjct: 649 TLVGYCDEGQHLVLIYEYMSNGNLKQHLSG 678

[Close]

BLAST of Spo08414.1 vs. TAIR (Arabidopsis)
Match: AT1G51850.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 117.9 bits (294), Expect = 5.000e-27
Identity = 58/91 (63.74%), Postives = 70/91 (76.92%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V +G +    +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 556 MTNNFQRILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKEFKAEVELLLRVHHKNLV 615

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGT 90
            LVGYCDEGE+  LIYEYM NG+L++H+SGT
Sbjct: 616 GLVGYCDEGENMALIYEYMANGDLKEHMSGT 646

[Close]

BLAST of Spo08414.1 vs. TAIR (Arabidopsis)
Match: AT2G28970.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 117.9 bits (294), Expect = 5.000e-27
Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQR+LG+GGFG V +G +    +VAVK+L+  S+     F+ E ELLMRVH KNLV
Sbjct: 477 MTNNFQRVLGEGGFGVVYHGCVNGTQQVAVKLLSQSSSQGYKHFKAEVELLMRVHHKNLV 536

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSG 89
           SLVGYCDEG+   LIYEYMPNG+L+ HLSG
Sbjct: 537 SLVGYCDEGDHLALIYEYMPNGDLKQHLSG 566

[Close]

BLAST of Spo08414.1 vs. TAIR (Arabidopsis)
Match: AT1G51830.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 117.1 bits (292), Expect = 8.600e-27
Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQR+LGKGGFG V +G +    +VA+KIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 384 MTNNFQRVLGKGGFGIVYHGLVNGTEQVAIKILSHSSSQGYKQFKAEVELLLRVHHKNLV 443

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
            LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 444 GLVGYCDEGENLALIYEYMANGDLKEHMSGTRNHFIL 480

[Close]

BLAST of Spo08414.1 vs. TAIR (Arabidopsis)
Match: AT1G51820.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.100e-26
Identity = 58/97 (59.79%), Postives = 73/97 (75.26%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V +G +    +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 576 MTNNFQRILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 635

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
            LVGYCDEG++  LIYEYM NG+L++H+SGT +  +L
Sbjct: 636 GLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFIL 672

[Close]

BLAST of Spo08414.1 vs. TAIR (Arabidopsis)
Match: AT1G51805.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.100e-26
Identity = 59/97 (60.82%), Postives = 73/97 (75.26%), Query Frame = 1


		  
Query: 1   MTNNFQRILGKGGFGAVSYGSLGDNTKVAVKILNLPSA--LISFRIEAELLMRVHQKNLV 60
           MTNNFQRILGKGGFG V +G +    +VAVKIL+  S+     F+ E ELL+RVH KNLV
Sbjct: 575 MTNNFQRILGKGGFGIVYHGFVNGVEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLV 634

Query: 61  SLVGYCDEGESTTLIYEYMPNGNLQDHLSGTADVLLL 96
            LVGYCDEGE+  LIYEYM NG+L++H+SGT +  +L
Sbjct: 635 GLVGYCDEGENMALIYEYMANGDLKEHMSGTRNRFIL 671

The following BLAST results are available for this feature:

BLAST of Spo08414.1 vs. NCBI nr
BLAST of Spo08414.1 vs. UniProtKB/TrEMBL
BLAST of Spo08414.1 vs. ExPASy Swiss-Prot
BLAST of Spo08414.1 vs. TAIR (Arabidopsis)

BLAST of Spo08414.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902186456\|gb\|KNA10685.1\|	4.7e-35	85.2	hypothetical protein SOVF_1420...	[more]
gi\|922506156\|ref\|XP_013589968.1\|	4.4e-25	62.8	PREDICTED: probable LRR recept...	[more]
gi\|674945563\|emb\|CDX87849.1\|	4.4e-25	62.8	BnaC06g09110D [Brassica napus]	[more]
gi\|922506153\|ref\|XP_013589967.1\|	4.4e-25	62.8	PREDICTED: probable LRR recept...	[more]
gi\|922554166\|ref\|XP_013605120.1\|	2.9e-24	60.8	PREDICTED: probable LRR recept...	[more]

BLAST of Spo08414.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QTV8_SPIOL	3.3e-35	85.2	Uncharacterized protein (Fragm...	[more]
A0A0D3CRJ3_BRAOL	3.1e-25	62.8	Uncharacterized protein OS=Bra...	[more]
A0A078DHF1_BRANA	3.1e-25	62.8	BnaC06g09110D protein OS=Brass...	[more]
A0A078JR18_BRANA	2.0e-24	61.8	BnaA05g35900D protein OS=Brass...	[more]
M4ENP4_BRARP	2.0e-24	61.8	Uncharacterized protein OS=Bra...	[more]

BLAST of Spo08414.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
Y5182_ARATH	2.0e-25	59.7	Probable LRR receptor-like ser...	[more]
Y5181_ARATH	4.4e-25	62.2	Probable LRR receptor-like ser...	[more]
RLK6_ARATH	5.8e-25	60.0	Receptor-like protein kinase A...	[more]
Y5573_ARATH	3.7e-24	56.7	Putative leucine-rich repeat r...	[more]
Y4245_ARATH	3.7e-24	60.0	Probable LRR receptor-like ser...	[more]

BLAST of Spo08414.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G51850.1	5.0e-27	63.7	Leucine-rich repeat protein ki...	[more]
AT2G28970.1	5.0e-27	63.3	Leucine-rich repeat protein ki...	[more]
AT1G51830.1	8.6e-27	58.7	Leucine-rich repeat protein ki...	[more]
AT1G51820.1	1.1e-26	59.7	Leucine-rich repeat protein ki...	[more]
AT1G51805.1	1.1e-26	60.8	Leucine-rich repeat protein ki...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	PROFILE	PS50011	PROTEIN_KINASE_DOM	coord: 3..136 score: 11
IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain	PFAM	PF07714	Pkinase_Tyr	coord: 5..105 score: 6.6
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 4..112 score: 7.3
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 9..31 scor
IPR020635	Tyrosine-protein kinase, catalytic domain	SMART	SM00219	tyrkin_6	coord: 3..129 score: 0.
None	No IPR available	GENE3D	3.30.200.20		coord: 9..78 score: 1.9
None	No IPR available	PANTHER	PTHR27003	FAMILY NOT NAMED	coord: 1..93 score: 3.2
None	No IPR available	PANTHER	PTHR27003:SF105	LEUCINE-RICH REPEAT PROTEIN KINASE-RELATED	coord: 1..93 score: 3.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006865	amino acid transport
biological_process	GO:0006857	oligopeptide transport
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0004713	protein tyrosine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity