Spo08490.1 (mRNA)

Overview
NameSpo08490.1
TypemRNA
OrganismSpinacia oleracea (Spinach)
DescriptionSel1 repeat protein
Locationchr5 : 25821429 .. 25825329 (-)
Sequence length1052
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAATCACATAAAGAGTTCTGGTTGGATGTAAAACCTCAAAGTTGTCACTTTCTCAATTGGCAACTGGATATCTGTTGATTGTGACTCAGCTTTTTCCTGTACACGACGTCGTATGCCTCTAATTGACTGCAAATTGCAATTGTGTAAAACCCTTCTCAGCAAGAATCTCTCTCCTCCCACAGTTGCTTCCATTTCTCTCCCCCTTGTTTTTCTCTAATAATTTTTTTTTTAACGAAAAATCCAAAAACCAATTGGCAAAACGCAGACAATTAAGCAGTAAAACGGCATGCAAAACGGAAGTAGCAGCAGCAACGGCGTCGGAGAGGGGCGGAAGCCGTTGTCAGAGATGGTGGCTGACTGTGTGAGGCGGTGGTTTCAAGACACTCTCAAGGAGGCCAAAGGCGGCGACGTCAATATGCAAGTTCTTGTCAGTCAGATGTACTTCGCTGGTTATGGTGTTCCCAAAGATGACCAAAAGGTACCTTCTTGATTTTCTCTCTTTTTTTTTGGGAAAAATTTGGTTAATTTTGTGATTCTGCTGTTATTTACTGATTTTATGGGTGCCCGTCATTTTAGATGTGCTATATAGTGAAATTAATTCTGGGTTTTTGTTAATTTATGTAGTTAGTGATGGGTATAGTGATTCCAGGTGCCAAAGATGCCCAATTTTTTGGGATAAAATCAAGGTTTATTTTTGTGTTTATGGGGTTATTTGGTGATTTTTATGGATGCCCCATCATCTTATATTGTCTTAAGTTGATGTAGTTGATTGTGGATTTTTGTCAATTTATAGACTTGTTTGATGATGTTTGTGATTGCCCAGCTTTGCAATTTTCAATGAATTGAATGGATAAACTCTGAGTTTGTGGCAACTCTTTGAGTTGTATGGGAAAATCGAGTTCGCGGCTTGGGTTTGGTTGTTCTTTAATGGGTAGTATTGTGAATTTAATTGTGCTTGAGTAAAGAAAGCAAGATTTCTCTTTGGCTTGTATTCTTTGATTTGAATTAGAATCAGAAACAAGTTCCTCATTTGCTCCTTTATTGAGGCAGTAGCTGATACTTGATCGTGCTTCGACCCTTCGAGATGAATTGGTCGAATGATTAGGCTCTAAATTTAGGGTTGTGGTCATTTGTGTCACTTGCTTTACAATTGTAGAGATTCTTGCTTTTCTGTGTATAGTCCTTCTCTTCCCTAGTAATACACATATGTGAAGTTTGAGGTTCTTTTATTGGTAAGGAGTTCAACAAATTGAAGCAACTTAAATTGACGTCAATTAGTACTTGGTGTGATTTTATGAGTTTGCTTCTTGATAGCTTTGATTCGTGCCATCATTTTTGTGTTTGTTTGAGATCATGTTTCACTATTTATGGGTTTCAGGCAAGGTTATGGTTGTCAAGGGCTTCTAGGGTAAGAGCATCAGTTTGGAAAGTGGGTGAAAAGCATCCTGGTAATCTTCTTCTTCATCTCCTCCCTTAAAAAATGGAATTTTCTTTTTCTGGCCCAAAAGTATCAGAATGTTCTCATTCCTTATACTGGTTTCTGTTTGTCGTCATTATAGGCTATAATGCAAGTGATTCCGATTCTGATGAATTGATTGGTGAAGCACACTGACTATGTTATTTAGAGATTGGTAACTAAAGTGAGTTTTAACTACTTTGGCAATGTCCTTTAGTTGAGACTTCTCTATAGGTAGAAATATTCCTTTTTGTATTACATGTTTCGTATGCACACTTGTACTGTGATGGTGTGTGATATAACTCTAGTGCAAATGTGCAATTTTAATCATGATGTCTCATTAATTCCTTTTTATTTAAATTGACTGCATGTTTCTGTGGCTCCTAGTTCTCTTTGGTTTATTTATGTTTAGGCTCATTTGTCGACAATAATAACTTTTGGAAATCAAAACATTCAGTTAGAAACTATGTTACTTGGACTCTTCATTTTACCTTAACTCCTCAAGTACCCGTGTCGGATCCTCGACACTTGGGGACATGAGTATGGACACTGGAGACTTCATGAACTATTTTCACAGAATAGTCGAGTCGGACACTTGGACATGTCTGATGTGGGTACCAGACTCCGAGTAACATAACTTAGAAATGTAATGAAGTTTATTCTATCCAAACTTACACTTGGACATGGTATGGACAATTGACACTGGGCACTTCATGAACTTTTTTCATGGAATAGCTGAGTCGGGGGCACTTGGACATGTCCGACATGGGTACCCGAGTCTGAGTAGCAAAGTTTAGAAATGTAATGAAGTTATTCTATCCAAACTGAACCTTTACTTTACTCACCTCAAACCCTGCGATGAAAGGACGGAAACGAGGGTTAAGCGGGTAAGATAATGGTCTTGGAACATAGTGGAATGAGTCTAGTGTAGCCAGTACGTATGAATAAAGGGGGAGTCCTTGACGCCCTTACGAGGGCGTTGAGATGCTCTCCTCATGGCGCTCTTCATTGGATGGGACATTTGTAGAAGGGGGTGAAGGATAAACTTGGAAAATTGGTTGAAACGTAGGACTTAGGAGGCACGTGTGCTCTCCTGTGGGCTATGAGTATCCCCCAATGGCAGAAAGAAGGTTATCAATAGTGAGTGTGATACTTCAGTAGCTGGTGTAGCCGGTGTTGCACATTCTGAGTGAGTATGAAGTTCTTTTTTGGATCTTCTGATGGAAGAATTATAAATGACTGCCATGGCCGGAATGCCCATATCCTTTTATTATATTCTTTTGGAACTTGGAGATGAAATGTAAAAGCTACCTTCGGGGCTGAGAATGATATAGATTTGGGTCATGACAAGGAAAAGTTAGAGCGTGTGGAACTGTTGCTGATAGTTTTGAACAAATCAATAAAAAATACCGTGGCCATCGAATTTATCTCTGTCTTCATCTTAAGCAACAAAAGTTCTTTTGTTTCCAAGGTACTCCATTAGATTGAGGAATTGAGCATGTGGCATAGGGGAAACTGATGTGAAGAAGTTAATTAATCCGTTGGTGATGATTCTACAATTTCCTGTTGCCTGAAAATGGCAAGGACGACAAACGCCTCACTTCTGAAAACACCAGCTGACCAGCCTAGATGAAGATCGTCACCTCCTCCTATTAGATCATTTTATAGCCTTTATCGTGCTCAATCAAGAGCCAATTCTGACCTTTAGTCATTCATATATCTGTTATTCTCACGCTTCAGTCTGTAGGATCTTATAATTCTACTATTTGAACCCAGTCGGCCAGTCCTATTCTTCATAAGTCTGTAGGATCTTATAATTTTACTATTTGAACCCAGTCCTATTCTTCATACCCGATCAAAGCTCATATCTTGATCCTTTGCCTTTATATGTGGGGTGGAGACTATGCGGACTATTACTACAGCGGAGGCAGATGGTGCAACAGACACTTATTCAGCCCAAATCTAACTTGACCAATAAGTCTGCCATCTAACCAATGACCCTATCAGCAGAGCACAGTACTCTACCAGCAGATGCTGCACTGTTGAGTTGGTTTTGTCCAGCTAGCGACGTGTCCTGTGAGTGGCTAAGGAACTGTGACTACGAGTTAGGGACGGCAAGGGTACTTGTTGGTTTTGTGGTACACAGGTACTGCAAGGCGTCTTTGCAATGCGGACAGAATGGTTATTGTTTCTGATAGTTTGTTTTCCAAAATAATATGAGTAGACGAGACAATGTACCGGCAGAAAATCATTTGACTGTGAATGCTGGCTACAGTTTAGTGAAGGTTGTTGACAGATCGAGTAACACAAAATGAAATTGGAATACAAGACAATCTACCGTTTTATGGACTGTTGAGCATCTACAATGGCACCTACATATCTGAAGAGTCATATGAATGTGAATTCCCTTGATCATATTTCCAATGGCATTTGAGCAGTGGA

mRNA sequence

AAAGAATCACATAAAGAGTTCTGGTTGGATGTAAAACCTCAAAGTTGTCACTTTCTCAATTGGCAACTGGATATCTGTTGATTGTGACTCAGCTTTTTCCTGTACACGACGTCGTATGCCTCTAATTGACTGCAAATTGCAATTGTACAATTAAGCAGTAAAACGGCATGCAAAACGGAAGTAGCAGCAGCAACGGCGTCGGAGAGGGGCGGAAGCCGTTGTCAGAGATGGTGGCTGACTGTGTGAGGCGGTGGTTTCAAGACACTCTCAAGGAGGCCAAAGGCGGCGACGTCAATATGCAAGTTCTTGTCAGTCAGATGTACTTCGCTGGTTATGGTGTTCCCAAAGATGACCAAAAGGCAAGGTTATGGTTGTCAAGGGCTTCTAGGGTAAGAGCATCAGTTTGGAAAGTGGGTGAAAAGCATCCTGGCTATAATGCAAGTGATTCCGATTCTGATGAATTGATTGGTGAAGCACACTGACTATGTTATTTAGAGATTGGTAACTAAAACTATGCGGACTATTACTACAGCGGAGGCAGATGGTGCAACAGACACTTATTCAGCCCAAATCTAACTTGACCAATAAGTCTGCCATCTAACCAATGACCCTATCAGCAGAGCACAGTACTCTACCAGCAGATGCTGCACTGTTGAGTTGGTTTTGTCCAGCTAGCGACGTGTCCTGTGAGTGGCTAAGGAACTGTGACTACGAGTTAGGGACGGCAAGGGTACTTGTTGGTTTTGTGGTACACAGGTACTGCAAGGCGTCTTTGCAATGCGGACAGAATGGTTATTGTTTCTGATAGTTTGTTTTCCAAAATAATATGAGTAGACGAGACAATGTACCGGCAGAAAATCATTTGACTGTGAATGCTGGCTACAGTTTAGTGAAGGTTGTTGACAGATCGAGTAACACAAAATGAAATTGGAATACAAGACAATCTACCGTTTTATGGACTGTTGAGCATCTACAATGGCACCTACATATCTGAAGAGTCATATGAATGTGAATTCCCTTGATCATATTTCCAATGGCATTTGAGCAGTGGA

Coding sequence (CDS)

ATGCAAAACGGAAGTAGCAGCAGCAACGGCGTCGGAGAGGGGCGGAAGCCGTTGTCAGAGATGGTGGCTGACTGTGTGAGGCGGTGGTTTCAAGACACTCTCAAGGAGGCCAAAGGCGGCGACGTCAATATGCAAGTTCTTGTCAGTCAGATGTACTTCGCTGGTTATGGTGTTCCCAAAGATGACCAAAAGGCAAGGTTATGGTTGTCAAGGGCTTCTAGGGTAAGAGCATCAGTTTGGAAAGTGGGTGAAAAGCATCCTGGCTATAATGCAAGTGATTCCGATTCTGATGAATTGATTGGTGAAGCACACTGA

Protein sequence

MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPKDDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEAH
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Spo08490Spo08490gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Spo08490.1Spo08490.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo08490.1.utr5p.2Spo08490.1.utr5p.2five_prime_UTR
Spo08490.1.utr5p.1Spo08490.1.utr5p.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo08490.1.CDS.3Spo08490.1.CDS.3CDS
Spo08490.1.CDS.2Spo08490.1.CDS.2CDS
Spo08490.1.CDS.1Spo08490.1.CDS.1CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo08490.1.utr3p.2Spo08490.1.utr3p.2three_prime_UTR
Spo08490.1.utr3p.1Spo08490.1.utr3p.1three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Spo08490.1.exon.5Spo08490.1.exon.5exon
Spo08490.1.exon.4Spo08490.1.exon.4exon
Spo08490.1.exon.3Spo08490.1.exon.3exon
Spo08490.1.exon.2Spo08490.1.exon.2exon
Spo08490.1.exon.1Spo08490.1.exon.1exon


Homology
[Close]
BLAST of Spo08490.1 vs. NCBI nr
Match: gi|902153223|gb|KNA05679.1| (hypothetical protein SOVF_188080 [Spinacia oleracea])

HSP 1 Score: 216.5 bits (550), Expect = 2.200e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

		  

Query: 1   MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPK 60
           MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPK
Sbjct: 1   MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPK 60

Query: 61  DDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEAH 105
           DDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEAH
Sbjct: 61  DDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEAH 104
[Close]
BLAST of Spo08490.1 vs. NCBI nr
Match: gi|731344751|ref|XP_010683583.1| (PREDICTED: uncharacterized protein LOC104898233 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 189.5 bits (480), Expect = 2.900e-45
Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 1 

		  

Query: 1   MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPK 60
           MQNGSSSSNG GEGRK LSE+VADCVRRWFQDTLKEAKGGDVNMQVLVSQMY AGYGVPK
Sbjct: 1   MQNGSSSSNGGGEGRKALSEVVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYTAGYGVPK 60

Query: 61  DDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEA 104
           D QKA+ W+SRASRVR+SVW+V EKHPGYNASDSDSDEL+G+A
Sbjct: 61  DTQKAKAWMSRASRVRSSVWRVSEKHPGYNASDSDSDELMGDA 103
[Close]
BLAST of Spo08490.1 vs. NCBI nr
Match: gi|1012115813|ref|XP_015961114.1| (PREDICTED: uncharacterized protein LOC107485106 [Arachis duranensis])

HSP 1 Score: 160.2 bits (404), Expect = 1.900e-36
Identity = 72/94 (76.60%), Postives = 86/94 (91.49%), Query Frame = 1 

		  

Query: 7   SSNGV-GEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPKDDQKA 66
           SS+G+   GR PLS +VADCV+RWF+DTLKEAK GD+NMQVLV QMY++GYGVP+DDQK 
Sbjct: 3   SSSGIESNGRVPLSGVVADCVKRWFRDTLKEAKAGDINMQVLVGQMYYSGYGVPRDDQKG 62

Query: 67  RLWLSRASRVRASVWKVGEKHPGYNASDSDSDEL 100
           ++WL+RASRVR+SVWKVG+KHPGYNASDSDSDEL
Sbjct: 63  KIWLTRASRVRSSVWKVGDKHPGYNASDSDSDEL 96
[Close]
BLAST of Spo08490.1 vs. NCBI nr
Match: gi|567873845|ref|XP_006429512.1| (hypothetical protein CICLE_v10013155mg [Citrus clementina])

HSP 1 Score: 158.7 bits (400), Expect = 5.600e-36
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 1 

		  

Query: 3   NGSSSSNGVGEG---RKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVP 62
           NGSSS +G       R PLSE+V+DCV+RWF+DTLKEAKGGD+NMQVLV QMYF+GYGV 
Sbjct: 12  NGSSSVSGNSSSETTRVPLSEVVSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVA 71

Query: 63  KDDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEA 104
           +D QK R+W+SRASR R+SVWKVGEKHPGYNASDSDSDE+  E+
Sbjct: 72  RDAQKGRIWISRASRTRSSVWKVGEKHPGYNASDSDSDEMKEES 115
[Close]
BLAST of Spo08490.1 vs. NCBI nr
Match: gi|388502396|gb|AFK39264.1| (unknown [Lotus japonicus])

HSP 1 Score: 157.5 bits (397), Expect = 1.200e-35
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 1 

		  

Query: 5   SSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPKDDQK 64
           SSS      GR PLSE+VADCV+RWF+DTLKEAKGGD+NMQVLV QMY  GYGVPKD QK
Sbjct: 3   SSSGRPTSNGRVPLSEVVADCVKRWFKDTLKEAKGGDINMQVLVGQMYCTGYGVPKDAQK 62

Query: 65  ARLWLSRASRVRASVWKVGEKHPGYNASDSDSDEL 100
            R+WL++ASRVR+SVWKVG+K PGYNASDSDSD+L
Sbjct: 63  GRIWLTKASRVRSSVWKVGDKRPGYNASDSDSDDL 97
[Close]
BLAST of Spo08490.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QEI6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_188080 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.600e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

		  

Query: 1   MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPK 60
           MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPK
Sbjct: 1   MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPK 60

Query: 61  DDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEAH 105
           DDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEAH
Sbjct: 61  DDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEAH 104
[Close]
BLAST of Spo08490.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2Z1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g157920 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.100e-45
Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 1 

		  

Query: 1   MQNGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPK 60
           MQNGSSSSNG GEGRK LSE+VADCVRRWFQDTLKEAKGGDVNMQVLVSQMY AGYGVPK
Sbjct: 1   MQNGSSSSNGGGEGRKALSEVVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYTAGYGVPK 60

Query: 61  DDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEA 104
           D QKA+ W+SRASRVR+SVW+V EKHPGYNASDSDSDEL+G+A
Sbjct: 61  DTQKAKAWMSRASRVRSSVWRVSEKHPGYNASDSDSDELMGDA 103
[Close]
BLAST of Spo08490.1 vs. UniProtKB/TrEMBL
Match: V4S5N3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013155mg PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.900e-36
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 1 

		  

Query: 3   NGSSSSNGVGEG---RKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVP 62
           NGSSS +G       R PLSE+V+DCV+RWF+DTLKEAKGGD+NMQVLV QMYF+GYGV 
Sbjct: 12  NGSSSVSGNSSSETTRVPLSEVVSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVA 71

Query: 63  KDDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEA 104
           +D QK R+W+SRASR R+SVWKVGEKHPGYNASDSDSDE+  E+
Sbjct: 72  RDAQKGRIWISRASRTRSSVWKVGEKHPGYNASDSDSDEMKEES 115
[Close]
BLAST of Spo08490.1 vs. UniProtKB/TrEMBL
Match: A0A067FJC6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033594mg PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 3.900e-36
Identity = 75/104 (72.12%), Postives = 88/104 (84.62%), Query Frame = 1 

		  

Query: 3   NGSSSSNGVGEG---RKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVP 62
           NGSSS +G       R PLSE+V+DCV+RWF+DTLKEAKGGD+NMQVLV QMYF+GYGV 
Sbjct: 12  NGSSSVSGNSSSETTRVPLSEVVSDCVKRWFRDTLKEAKGGDINMQVLVGQMYFSGYGVA 71

Query: 63  KDDQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDELIGEA 104
           +D QK R+W+SRASR R+SVWKVGEKHPGYNASDSDSDE+  E+
Sbjct: 72  RDAQKGRIWISRASRTRSSVWKVGEKHPGYNASDSDSDEMKEES 115
[Close]
BLAST of Spo08490.1 vs. UniProtKB/TrEMBL
Match: I3SG72_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 8.600e-36
Identity = 72/95 (75.79%), Postives = 82/95 (86.32%), Query Frame = 1 

		  

Query: 5   SSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPKDDQK 64
           SSS      GR PLSE+VADCV+RWF+DTLKEAKGGD+NMQVLV QMY  GYGVPKD QK
Sbjct: 3   SSSGRPTSNGRVPLSEVVADCVKRWFKDTLKEAKGGDINMQVLVGQMYCTGYGVPKDAQK 62

Query: 65  ARLWLSRASRVRASVWKVGEKHPGYNASDSDSDEL 100
            R+WL++ASRVR+SVWKVG+K PGYNASDSDSD+L
Sbjct: 63  GRIWLTKASRVRSSVWKVGDKRPGYNASDSDSDDL 97
[Close]
BLAST of Spo08490.1 vs. TAIR (Arabidopsis)
Match: AT5G05360.1 (unknown protein)

HSP 1 Score: 131.7 bits (330), Expect = 2.600e-31
Identity = 59/96 (61.46%), Postives = 75/96 (78.12%), Query Frame = 1 

		  

Query: 3   NGSSSSNGVGEGRKPLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPKDD 62
           N + +S      R PL+++V DCVRRWFQDTLKEAK GDV MQVLV QMY +GYG+PKD+
Sbjct: 65  NPAPASGSDPINRVPLAQVVEDCVRRWFQDTLKEAKSGDVGMQVLVGQMYCSGYGIPKDE 124

Query: 63  QKARLWLSRASRVRASVWKVGEKHPGYNASDSDSDE 99
            K R W+++ASR R+S W+V +K PGYNASDSDS++
Sbjct: 125 NKGRAWINKASRTRSSAWQVSDKPPGYNASDSDSND 160
[Close]
BLAST of Spo08490.1 vs. TAIR (Arabidopsis)
Match: AT2G38450.1 (Sel1-like (InterPro:IPR006597))

HSP 1 Score: 129.8 bits (325), Expect = 9.800e-31
Identity = 59/96 (61.46%), Postives = 78/96 (81.25%), Query Frame = 1 

		  

Query: 5   SSSSNGVGEGRK---PLSEMVADCVRRWFQDTLKEAKGGDVNMQVLVSQMYFAGYGVPKD 64
           SSS+    E  +   PLS +V+DC +RWF+DTL+EAK G++ MQVL+ QMY++GYGVPKD
Sbjct: 41  SSSTTTTSETTRRFVPLSSVVSDCAKRWFKDTLEEAKAGNITMQVLLGQMYYSGYGVPKD 100

Query: 65  DQKARLWLSRASRVRASVWKVGEKHPGYNASDSDSD 98
            +K RLW+++ASRVR+SVWKV +K PGYNASDSDS+
Sbjct: 101 ARKGRLWITKASRVRSSVWKVIDKRPGYNASDSDSE 136
The following BLAST results are available for this feature:
BLAST of Spo08490.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902153223|gb|KNA05679.1|2.2e-53100.hypothetical protein SOVF_1880... [more]
gi|731344751|ref|XP_010683583.1|2.9e-4587.3PREDICTED: uncharacterized pro... [more]
gi|1012115813|ref|XP_015961114.1|1.9e-3676.6PREDICTED: uncharacterized pro... [more]
gi|567873845|ref|XP_006429512.1|5.6e-3672.1hypothetical protein CICLE_v10... [more]
gi|388502396|gb|AFK39264.1|1.2e-3575.7unknown [Lotus japonicus][more]
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BLAST of Spo08490.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QEI6_SPIOL1.6e-53100.Uncharacterized protein OS=Spi... [more]
A0A0J8C2Z1_BETVU2.1e-4587.3Uncharacterized protein OS=Bet... [more]
V4S5N3_9ROSI3.9e-3672.1Uncharacterized protein OS=Cit... [more]
A0A067FJC6_CITSI3.9e-3672.1Uncharacterized protein OS=Cit... [more]
I3SG72_LOTJA8.6e-3675.7Uncharacterized protein OS=Lot... [more]
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BLAST of Spo08490.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo08490.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G05360.12.6e-3161.4unknown protein[more]
AT2G38450.19.8e-3161.4Sel1-like (InterPro:IPR006597)[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 35..73
score: 1.
NoneNo IPR availablePANTHERPTHR36792FAMILY NOT NAMEDcoord: 15..98
score: 3.5
NoneNo IPR availablePANTHERPTHR36792:SF2SUBFAMILY NOT NAMEDcoord: 15..98
score: 3.5
NoneNo IPR availableunknownSSF81901HCP-likecoord: 34..73
score: 8.

GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding