Spo08598.1 (mRNA) | SpinachBase

Overview


Name	Spo08598.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr6 : 13548571 .. 13556920 (+)
Sequence length	1040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTGTCAACAAAAAAATCTCTCTTCAACCGACTTATCTACGAGCCCCTTTGTTTGTTTTCACTTTTCACATAATTTTGAAACACCTGGTACTCCGGTAGCAAATTAGCAATACGACGCAGATATCCTTTTCCTGAATTTGAGTCGTGTCCAAAAAAATGTCATCACTAGGAGCAGGGAAGGGGCTTTTGGAGGTAGGAAAGTTCGCCGTCTACGTCGCAGTTCCCATTGTTCTCATGTACGCTTTTGCCAACAATACCAAGAATCTCCAGAAATTTATGGGCGGAGTAAGTTCCTGTTTTTGTCTTCTAATCATCTCTATCTTTCATTTTATTAGGGTTCGAAATTACAATTTGATTTCGGTTCCTAGCTTTGTGTGATTTTCACATTCTGTTTTGTTTTTCAATTTAATGTTGAATATCGGATGCAATTTTATTGACAAATTCTGGTTATTGCTTGATTTTGGCTTGATAATTATGTAAAAGGATTGGTTACATGAACAACCCGGACGTTTATGCTCGTATTTCTTAATGAATTTCCTGTACATACACAAATCAATTGATCATTTTGCGTAATAGAAATTAAAACCCAGATTAATGTCTCTGGGAAAAGCTGAAAGAAGATTGTTATCCTCCTTTGAATTTCCGGCTTTGGATCTAGCAACAAGACGAATCGGGAACACCCCTCGTCTGAAAGCAAGAGCATTTTCAGCAACAAGCTGTGGGAGTTGTTATACGGGTTACTGAAAATTTTGTTTGTTGTAACATAAAATGTAGCTTTACTGAGAGAAATACAAACAATTTAAGCAATTGAATCAGACAAGAGAGCTGAAAAAATTTCACTTATAGTAAACAAAATGTTTTCTAAAAATGTTTGTATTATAGGTGTCTGATTTTATTTAGTAGTGTTTTTTGAAGTATTAATGAAACCACGTACACAATCCACAAATGTCCCAAAAAATCATCCTATAACTAACTGAGGGATACGATTGTATACGTCATGACCTCCCTGGACTCATAAATGATAGGTCCCCATTTTCCCCACTGTTTTTGTTGTTAATCAAATTTCCTGGTAGATATTATGTGCCAAGCTATATACAACTGGAAACGATAGAGAATGAAAATAAAGTCTTAACTAAGACACATGTAGAGGGTTAGAAACAGAGGATTTCTATCTATGGTTGTCTTTCATATCTCTAATACCTTACGTTCTAATGTTTCATCTATACACGGGTTCACAGGATTCTATGGTTAGGACTTTAGAAAAATTAGTTTTAATAATCCAACCTTTGGACGTTTCGCTTTTATTAATCCCACATATGATTTTTTTTTATAAATCCAAACTTTTATGGTCATTCGCTTTAACAGTCATATGGTAACCGGTTTAAAAGGTCACATTGATACATTTTTATTAAGAATAATTACTCTTTCTCGTCCCTCATCTTATTCGGTCATCATCATGATTCATGACCATCTCACCACCGCCCTCTTTCTCCTTCGTATTTCCTCATCCATCATCATCATCAATCTCAAGTGCCTTTATTCATCTTCCCCCAAATTGTTTCCTCTAATTATTTACACCCAAAATTAAAAAAAGTTAAGAAAAAAAGTATTTACATGTTTGTCAGCGAAGGAAAAAAGAGAGAAATAAGGGGGAGTTGAGGTTGCGTTGGATTAGTTTTGGGTGGTTGTAGGTGGTGAAAACGGGACAGTGCTTGCAATTGATGAAGGAAGAAAAAGATGAAAAATGAGCAAAAGTGCTAACTGCTAAGGGCAGAGGGAGTTGAAGGTGCACTTGGTTTACCAGTTTGGGGCTGGGTGGTTGGTTGATGTTTGGGCGGGGGGACGGCGGTCTTGGAGGTTGTGGTGGTTTCGAGCGAGGAGGAGAGAGAAAGATGAGTGAGAGAGGAGCAGGGAGAGAGAAGAGAGTAGAGGAGGGTCGACGGAAACACTTAATGTGGCTTGGGGTTGTCGTGGCTGGGGGTAGAGGTGATTCTTGAGTCATTTGATTGACGCCATTGTTTAAGGCTTGAAGGTTAAAGAGGAGGAGAGAGAAAGGGGTAGAGGGATTGTTATTTAATTTAAATAAAAAATAAAAAATGTAAACCAATCAAAAAGTGACACGTGACATGGTTTACCTGATTTACTAGTAGCAACAGGTCAAAGACCATTTAGAGAAAGTACCTACAAAAGTTAGGATTTATAAAAAAAAATACTCATATGTGGGATTAATAAAAGCGAAACGCCCAAAGGTTGGATTATTAAAACCAAATTTTCCTAGGACTTTAAATTTAGGCGTGCTATTATTCCCATTTTGTGCTTAATGATTGAAATTTTTTATCTTTAAATGAACGATTGTAGCGTAGTTGATAATGCCAAGATTAAATATGGTCTTTTCCTCATTGGCAGATATGGTTAAACTCATTCTGGACCTCCATTTAGAATTACGCCTACACAGCTAACACTATATTAGCCATTCTTTTTGTGATATATTAGTCATTTATATTCTCGGAATATATTTTTCATTGCTCCTAGTATGAACAGTTACAAACCTTAGGACTCAGTAGTCAACATTCTAATTCTTGCTGCAGTATCTCACAAACTAACTTATCCAAAAATTAATTGAAGGATTTTCAGGGAACATATTTTACTTTTTAAGTCATCCCATGATTTAAATAAAAATGAGTTTATAGTAACTGAATCACTTAGTCTAAATAGCTAATGATCTGGATTTAAGTTCTTAGCTTCTCGTGTGTATTGCTAATTTGCTACTATATTTAATATAAATGAGCTTAAATGTTGATGATCTATCATATCTATGCAAATGGCGCAATGCTAATAGGCTGTATGACCTCATTGATGTGATCGTAGGTTCCAAGTTTCTGCTATAAGTAGGGACTAATGTCTAGAATTTTCTGGTGAGCTGATTTTTCCTGGATTAACCCTAAGTGAACTATGGTGAGTTTCACCTAACAAACCCAAAGTTTTTCTGTTTGTAACCACACCAACTTTATTCAAAATTCCAGTCTCCCTGAGGTTACCCTTGTTCCAAGCTTTAAGAAGGAGAAAGTGTATGAAATTTTTCATGAAAGGAAGAATGAGAGTAACTGAACAAGTACTCTTTACAAGAAAGAGAAAACCAAAAATTTCTGCTTCAGCACCTGACTGGTGCTCTATCATCTATCATCTCTCATACCCTCCATGCTACGGATTGTACCATGTATGAATGGTTACGTGGTAATTCCATTTTCTTTAAGCTGATGAATTTTGTACCAGTTGTACAAATTGTTGTTTCTACTTTCACGTGGTTTACTCAATCATGTTCACAGGGAGAGGTTGACTCAAATGGGTAAGTTTCATCATTAGGAATTAAACACAATTTAATTAAACCGGTAAACGTTCGTGTCGAAGTCTGGGGTCAAAGCCGTCGGGTCGTTCCTAAAGTCAAGCAAGCTAAGAGTTGGTTACGGAGACCTTATTTGTTGGACGACAGTATATTACACGGTGGTGCACTTGAGATAGAATTCATGTTTCCATGTGTCAATAATATGCGTGGCATTGTATCAAAGACAAGTTCCATAGTCCTTTGGGAAATTAACTTATTTAGTTTGATATTTTATGGTTTCTTAGATTTATGATTGTTGTTAGGAAACTAGATAGTTTATTTGGTATGTAATAATCTCTAGAATTATTTGGTCTTAGAGGAGCAAGCATAGTAGATACGGGTTTCTAGTTTAGCCTATAAAAGTGGGTTTAGGTCTAGCTAGAAAATAAGAAGGAAAATACATTGTTGAGAGGAATCATCAATTGAGGGTTTATTGTATTATTTTATAGAAAATTAATAATATTTGAGGGGAGGAAATACAAATTTCCTCATTTCTTTTTTTATTATTATTTTGCTATTTCTCTTACATTATATTTACAGGTTTGTTCCTAATCCTTTGTGGCACCTGTTTGGCTATAACATTTATGATGTTGATTAGTGAGTTTTTTTAACGTACTTTTGTAGAAAAATCTAGGGATATTGAGAATGTGCCACACATCCACGTAGGTGTACAATCATATATTCTGTATTCTAGAAGGGAGGGTAATTAAGGAATTGTGAAAAGAGTTGATTACGCAGATTCTGATAAAGGGCAGGGCAGTACATAGAAAGTTTCTTAGAAGGTATTATCTCAATGGTTTGTTAGAAGAGGAGTGAGGAACATGCCTTCTGAGGAAATGAATGTAATAATAGGGAAACATATGTGAGAGAGAATCATTCTGGAAATTTGAGTAGTTTTGTATTGGGAGGAACTACCCCTTTAAGAGTGGCAACCTTTTAATTGGGTTGAATAAACTGATCCTAGGTTCCCTACAAATTAGCGCCATTACTTAAATTATGATCTATTTCTTAGCAGAATGTTAGGGACTTAGGGTATTCTTGGATGACTAAAAAGGTATGCTTGCAATATGGAGGCCTGAAAAGGTGGTGCAAACCCAACCCTTTTTAGATGATGGCTACTATGAGCTTTAAGACCGGTATTCTTTATAAAATGTGAATTCATAGGCTCCTCCCTTGAAGGCTAGAACTGGATAGAGTTGTATTTCAAAACTCTGAGTCACTTTGATGTATCAGTTTGATGAAGTATAATGGTTCTGTAAGAGGGAACAAAACGTCACACAGACATACACTCACATGTGGAATTTGACTTGGTTGGAAAAGAGGTTGATTACGACATTTCAACCTACTAGCAATTGTTTGTGGACTAATGTTTTTGGTTTTGAGGTTTTAGAATTGTAGATTGTACAACGTTGATGAGTGCTTCTATTTTGACGCTTCATTATTGGACTTCTCTAAGATGCAATAAAATGTGATCAATAACATTTACTCCATGATATGTTATAATTTATAGATTTCTATTACAGATTGGTCAGTGTTTGGTTGTATCTTCTGTTGCCAAAAGCAGTATAAGTGCCTAAGTGGCCTTCTCCTTCCCTCGTGCTCTTTTTTCTATGACATGTATTAAATATTCTGAGGCCAGAAGGAGAATGCATTTTGGTCTTAATAGGATGCAGTGTCATGTTTTTTAGGGAGGGGGTAATAAAGCTTGTGATTCCTGTTGTTTTCACTCAGGAAATTAAGGAAAGCGAAAATAGAGCCTTGTTGTTTGTTGAAGTCATATAGTAAGCTTTAGCATGCTGATTTCTCTTTTTTACTTTTATTGGCCTTATATGGGCTGCATCTTACCGCATCCCCCTTCCATCAAAATAATCAAAAGTATTTTTTACGCGCAACCTTTTTGGAAGATGTATATTTTATTTACTGTAATCGTTTAGGACTAGCTTGTTCTGTATTTTCTTTCGAATGGGGCACTACAAGAAGGGGGGGGGGGGNGGGGGGGGGGGGGGTGAATTGTAGTATGAAACCTATTAGCCAATGTTGCAGAATTATAAAGGAACTTAAGCAAGTAGAGAAATAATACAAGAGAGCTTTTACAAGGAAACCCTTGAATGAATGAGGAAGCTCTCCTTTTGTAGAGGTAGGAACCTTAACCACTTCCTCCACAATCTCCTTCACTAACATCCACCAAGGCCTAGAATTAAGGCAATATCCCATGACTTTAGTTAGTAGAGTAAATCGGAGTGAGGGCTAAGCATAATGAGGTTTTCCATGAAATCCTATTCTTTCTCCATCAACACTAGGTTTTTCAAAACAACAAAACGATGTTTTTATTTTCTAAAATTAAACCTTTTGAATTTGATTTTAATAAAATATAAAATAAACATTATTGAAAATAAAATACCTAAGAAATCAGATTTTATTCTTAAAAAAAATATAATTGTGATTTATTTATTAAAAACGAAATTTAAACACATAAAAGTCCAAAAAGATATTTAAAACAAATCCTAGATTAAATAGGATTTTATTAAAAACGAAATTTAAATAATAAATAAATAAGTAAGGGATATTAAAATCAGAATCCTAAACTAAATAAGATTTTATAAAAATTATCTTTAATTTGAAGACTTAACTTAATATAGTTTTAGTAGGAGATAAATACTCAGAGTCAAAGGTAAATTCCTAACTACTAGGTGTGTTAAAAGCCACATTTTCACACTTAAAAATTACCTTAAGAGTAGGAGTATTCTAGGAAAATAAACTGACCTTATAACTCAAAAGTCCCGCCAAGTTCCTTTTAGTACCATGTTTCTAAATTGTTCAAGTTTCTACATACTTACATGAATTCTAGAAAATAAACTCTTATTTTCTTCTTTATGTTCCATGATGCTCTAACTCAAGAGCCTTATGTTGATTGTTCCGCTTCTGGAACTTCTGCATGGCTTATTCCTACTCATAAACTTTATACTCAGTGTTCCTCTTAGGATCTGCTGAGTTTGTGCTCCTTTAACTTAAAGGAACACAAACTCAGCAGATCCTAAGAGGAACACTGAGTATAAAGTTTAAGGATCTTTGCTGCTGATTTGCTACTTGATTTTTTGACTTGAACTTTTCATGTTTGTTTCTTCATTATCTTCACTTCGTATATATATTGGAACTCAAACATAGGTTACTCATTTGCTAGTTATCATCAAAACCATAAAGTTGCTGATGACAACCAATACAAACAAGATGAAGAAAGCTAAACTAATAACCAAGTATATAGTAGTTAAGAACACTAACTCTAAGTCTGATAGTAAACTCATACAATTAGATTTCTCTTCTACGGAACTTCACTTCTGGAGTTCCTCTCAGAAACTTTACTTCTTCTTGCGTATATTTCACAATCTTCCAACTAAATGATCCTTATTGACCTTCATTACTTGTCCATGCACATCTCAACAATACGCACATTAGATCGAGAATCATCAAAACACTATATTACTCAACAGTGACTAGTAATCCTGTAATGAACTGGCCTAATAGGAAGGGGCAGTGTAGGTATTCCATAATTGGTCTGTTAAAAGGTAGCTTAAAGAGGAAGATATTTGTTGAGTTTGGGAAGAGAAAATCAGAAATGCTATAAATAAGAGAGTAGTGAAAGAAGAGGATATCCAGAATATTGAATTGTTATCTTAGTTTCTTTTAGCATTTGGGAGTGAAACAAGCCACTTGAAAGCTTGTGTATCAATCGATTGTTCTGTTTTTTTTCAGAATATTAATCCCAATTGTCATTTTCTTTCTTTAATTCTTCCATCTATTACATTCCAATTATACTAGTTCATAACATATCCCCTAATTAGCTTTTACTAGCTCTTTTTCATTAGAACAACCTGTCTACAGAAATTGAAAGTGGAAAGTCTAGTAAAAGTTTGCTTCTACTTTTTTCATCAAATACTAAAGTTGACACTCGGATGAATTGTTTTACTGTTTTTATAATCGATTAAACTCTTATGAAACAATAAATCAACTGAGGGAAGCTATTGAGTGTTGATGTCACTTGTTAAGGTCTTAAGGTTACTGAGAGTGTTGTGTTGTGTTGAGACCTCTCTGTCACTTGTGTGTTATGTTTCCACTTGGAAGCAATTTTTTGGTTTCTGAAGACTGGTTTATTTTCCGCTTTTCTATTTCCGTACCTGTTAGAGTCTAAACATTTCTTCTTATTTACTGTGGGCAGCGTAATTATGTTGTCTATCCACCTGAGGGACCAAGGCCTCCATCACCAGAGGAAATGCGAGAAATGGCGCGTGATCTAGCTCGTAAGAGGAACAGCTAATCATGTTCTAATGCAGGACTATGAACGGGTTTTAACGGACCACTTTAATAGGATATCATAGAGGAGCTTCAACAGTCCAAACAAGTCACTTGAAGCTCCTCCCTGTCACTTTCTTATATGAACCCTCACACTCACATGTGATGTCAATTTGACAGCTTTCTGTATACAGTTTAGTAGTTTACCTCTCAGTTGGAGTATATAATAAATCGAATTAACGAATGCACTGTGATTGTTCTGGTTTTCAGTTCAAGTGTGTCGTGTACATGTATGGCATGTAAAGTCAAAACTCTTTTATGTTTGTCTTCCTCTCATTTTTTGAGGTAGAAGACATCTATTATATTGATTACATATCTCCATGTCGTTATATATTTAATGTTTCTGGTAATTTTTTTGTATAAATGTAGCCGGTTGTAATTTTCCCTTCAGACTTGCAATTGTGGGTACATAATTTGTCCGACAGTTGTAGGCTTGTAGATACGTGATCGGTGTCATCTTTTTGTTTTTGTTAGGTAGTCTTATGAGGCGAGCTCACAACCACAATGATATGCTGTATAACCCGGGTAACTTTACTTATTTTAGAGGTTAATTCTTACTTTATCTTTAGATAATTAACTTTTTATGTCTCGCAATAAATTAGTATGAAACAGTATCGCC

mRNA sequence

CCCCTGTCAACAAAAAAATCTCTCTTCAACCGACTTATCTACGAGCCCCTTTGTTTGTTTTCACTTTTCACATAATTTTGAAACACCTGGTACTCCGGTAGCAAATTAGCAATACGACGCAGATATCCTTTTCCTGAATTTGAGTCGTGTCCAAAAAAATGTCATCACTAGGAGCAGGGAAGGGGCTTTTGGAGGTAGGAAAGTTCGCCGTCTACGTCGCAGTTCCCATTGTTCTCATGTACGCTTTTGCCAACAATACCAAGAATCTCCAGAAATTTATGGGCGGACGTAATTATGTTGTCTATCCACCTGAGGGACCAAGGCCTCCATCACCAGAGGAAATGCGAGAAATGGCGCGTGATCTAGCTCGTAAGAGGAACAGCTAATCATGTTCTAATGCAGGACTATGAACGGGTTTTAACGGACCACTTTAATAGGATATCATAGAGGAGCTTCAACAGTCCAAACAAGTCACTTGAAGCTCCTCCCTGTCACTTTCTTATATGAACCCTCACACTCACATGTGATGTCAATTTGACAGCTTTCTGTATACAGTTTAGTAGTTTACCTCTCAGTTGGAGTATATAATAAATCGAATTAACGAATGCACTGTGATTGTTCTGGTTTTCAGTTCAAGTGTGTCGTGTACATGTATGGCATGTAAAGTCAAAACTCTTTTATGTTTGTCTTCCTCTCATTTTTTGAGGTAGAAGACATCTATTATATTGATTACATATCTCCATGTCGTTATATATTTAATGTTTCTGGTAATTTTTTTGTATAAATGTAGCCGGTTGTAATTTTCCCTTCAGACTTGCAATTGTGGGTACATAATTTGTCCGACAGTTGTAGGCTTGTAGATACGTGATCGGTGTCATCTTTTTGTTTTTGTTAGGTAGTCTTATGAGGCGAGCTCACAACCACAATGATATGCTGTATAACCCGGGTAACTTTACTTATTTTAGAGGTTAATTCTTACTTTATCTTTAGATAATTAACTTTTTATGTCTCGCAATAAATTAGTATGAAACAGTATCGCC

Coding sequence (CDS)

ATGTCATCACTAGGAGCAGGGAAGGGGCTTTTGGAGGTAGGAAAGTTCGCCGTCTACGTCGCAGTTCCCATTGTTCTCATGTACGCTTTTGCCAACAATACCAAGAATCTCCAGAAATTTATGGGCGGACGTAATTATGTTGTCTATCCACCTGAGGGACCAAGGCCTCCATCACCAGAGGAAATGCGAGAAATGGCGCGTGATCTAGCTCGTAAGAGGAACAGCTAA

Protein sequence

MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPEEMREMARDLARKRNS

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08598	Spo08598	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08598.1	Spo08598.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08598.1.exon.1	Spo08598.1.exon.1	exon
Spo08598.1.exon.2	Spo08598.1.exon.2	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08598.1.utr5p.1	Spo08598.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08598.1.CDS.1	Spo08598.1.CDS.1	CDS
Spo08598.1.CDS.2	Spo08598.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08598.1.utr3p.1	Spo08598.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo08598.1 vs. NCBI nr
Match: gi|902143143|gb|KNA04823.1| (hypothetical protein SOVF_196170 [Spinacia oleracea])

HSP 1 Score: 152.1 bits (383), Expect = 3.800e-34
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE
Sbjct: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60

Query: 61 EMREMARDLARKRNS 76
          EMREMARDLARKRNS
Sbjct: 61 EMREMARDLARKRNS 75

[Close]

BLAST of Spo08598.1 vs. NCBI nr
Match: gi|731343866|ref|XP_010683107.1| (PREDICTED: uncharacterized protein LOC104897848 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 139.0 bits (349), Expect = 3.300e-30
Identity = 67/74 (90.54%), Postives = 72/74 (97.30%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLGAGKGLLEVGKFAVYV+VPIVLM++FANNTKNLQKFMGGR+YVVYPPE PRPPSPE
Sbjct: 1  MSSLGAGKGLLEVGKFAVYVSVPIVLMFSFANNTKNLQKFMGGRSYVVYPPEAPRPPSPE 60

Query: 61 EMREMARDLARKRN 75
          EMREMAR+LA KRN
Sbjct: 61 EMREMARELAHKRN 74

[Close]

BLAST of Spo08598.1 vs. NCBI nr
Match: gi|823249271|ref|XP_012457284.1| (PREDICTED: uncharacterized protein LOC105778181 [Gossypium raimondii])

HSP 1 Score: 129.8 bits (325), Expect = 2.000e-27
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLG  KG+LE+ KF +YV +PIVLMY FANNTKNLQKFMG R+Y+VYPPEGPRPPSPE
Sbjct: 1  MSSLGTSKGVLEIAKFGLYVTIPIVLMYTFANNTKNLQKFMGNRSYIVYPPEGPRPPSPE 60

Query: 61 EMREMARDLARKRNS 76
          E+REMAR+LARKRN+
Sbjct: 61 ELREMARELARKRNN 75

[Close]

BLAST of Spo08598.1 vs. NCBI nr
Match: gi|728831948|gb|KHG11391.1| (hypothetical protein F383_11933 [Gossypium arboreum])

HSP 1 Score: 129.0 bits (323), Expect = 3.400e-27
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLG  KG+LE+ KF +YV +PIVLMY FANNTKNLQKFMG R+YVVYPPEGPRPPSPE
Sbjct: 1  MSSLGTSKGVLEIAKFGLYVTIPIVLMYTFANNTKNLQKFMGNRSYVVYPPEGPRPPSPE 60

Query: 61 EMREMARDLARKRNS 76
          E+REMAR+LARK+N+
Sbjct: 61 ELREMARELARKKNN 75

[Close]

BLAST of Spo08598.1 vs. NCBI nr
Match: gi|823163963|ref|XP_012481928.1| (PREDICTED: uncharacterized protein LOC105796690 [Gossypium raimondii])

HSP 1 Score: 129.0 bits (323), Expect = 3.400e-27
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLG  KG+LE+ KF +YV +PIVLMY FANNTKNLQKFMG R+YVVYPPEGPRPPSPE
Sbjct: 21 MSSLGTSKGVLEIAKFGLYVTIPIVLMYTFANNTKNLQKFMGNRSYVVYPPEGPRPPSPE 80

Query: 61 EMREMARDLARKRNS 76
          E+REMAR+LARK+N+
Sbjct: 81 ELREMARELARKKNN 95

[Close]

BLAST of Spo08598.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QDQ5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_196170 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.600e-34
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE
Sbjct: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60

Query: 61 EMREMARDLARKRNS 76
          EMREMARDLARKRNS
Sbjct: 61 EMREMARDLARKRNS 75

[Close]

BLAST of Spo08598.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C0J6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153290 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.300e-30
Identity = 67/74 (90.54%), Postives = 72/74 (97.30%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLGAGKGLLEVGKFAVYV+VPIVLM++FANNTKNLQKFMGGR+YVVYPPE PRPPSPE
Sbjct: 1  MSSLGAGKGLLEVGKFAVYVSVPIVLMFSFANNTKNLQKFMGGRSYVVYPPEAPRPPSPE 60

Query: 61 EMREMARDLARKRN 75
          EMREMAR+LA KRN
Sbjct: 61 EMREMARELAHKRN 74

[Close]

BLAST of Spo08598.1 vs. UniProtKB/TrEMBL
Match: A0A0D2UUT4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G165000 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.400e-27
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLG  KG+LE+ KF +YV +PIVLMY FANNTKNLQKFMG R+Y+VYPPEGPRPPSPE
Sbjct: 1  MSSLGTSKGVLEIAKFGLYVTIPIVLMYTFANNTKNLQKFMGNRSYIVYPPEGPRPPSPE 60

Query: 61 EMREMARDLARKRNS 76
          E+REMAR+LARKRN+
Sbjct: 61 ELREMARELARKRNN 75

[Close]

BLAST of Spo08598.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NJZ2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_11933 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.400e-27
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLG  KG+LE+ KF +YV +PIVLMY FANNTKNLQKFMG R+YVVYPPEGPRPPSPE
Sbjct: 1  MSSLGTSKGVLEIAKFGLYVTIPIVLMYTFANNTKNLQKFMGNRSYVVYPPEGPRPPSPE 60

Query: 61 EMREMARDLARKRNS 76
          E+REMAR+LARK+N+
Sbjct: 61 ELREMARELARKKNN 75

[Close]

BLAST of Spo08598.1 vs. UniProtKB/TrEMBL
Match: A0A0D2RFL9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G046200 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.400e-27
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSSLG  KG+LE+ KF +YV +PIVLMY FANNTKNLQKFMG R+YVVYPPEGPRPPSPE
Sbjct: 21 MSSLGTSKGVLEIAKFGLYVTIPIVLMYTFANNTKNLQKFMGNRSYVVYPPEGPRPPSPE 80

Query: 61 EMREMARDLARKRNS 76
          E+REMAR+LARK+N+
Sbjct: 81 ELREMARELARKKNN 95

[Close]

BLAST of Spo08598.1 vs. TAIR (Arabidopsis)
Match: AT4G14615.1 (unknown protein)

HSP 1 Score: 116.7 bits (291), Expect = 6.200e-27
Identity = 54/74 (72.97%), Postives = 65/74 (87.84%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSS+G  KG+LE+ KF VYVAVPIVLMY FANN+ N++KFMG R+YVVYP E PRPPSP+
Sbjct: 1  MSSVGTSKGVLEIVKFGVYVAVPIVLMYTFANNSTNIKKFMGNRSYVVYPEEAPRPPSPD 60

Query: 61 EMREMARDLARKRN 75
          E+REMAR+LARK+N
Sbjct: 61 ELREMARELARKKN 74

[Close]

BLAST of Spo08598.1 vs. TAIR (Arabidopsis)
Match: AT1G52825.1 (unknown protein)

HSP 1 Score: 109.0 bits (271), Expect = 1.300e-24
Identity = 50/73 (68.49%), Postives = 61/73 (83.56%), Query Frame = 1


		  
Query: 1  MSSLGAGKGLLEVGKFAVYVAVPIVLMYAFANNTKNLQKFMGGRNYVVYPPEGPRPPSPE 60
          MSS+G  KG+LE+ KF VYVAVPIVL+Y FANN+ N++KFMG  +YVVYP E PRPPSPE
Sbjct: 1  MSSVGTSKGILEIAKFGVYVAVPIVLIYTFANNSTNIKKFMGNHSYVVYPKEAPRPPSPE 60

Query: 61 EMREMARDLARKR 74
          E+REMA+ LA K+
Sbjct: 61 ELREMAKQLALKK 73

The following BLAST results are available for this feature:

BLAST of Spo08598.1 vs. NCBI nr
BLAST of Spo08598.1 vs. UniProtKB/TrEMBL
BLAST of Spo08598.1 vs. ExPASy Swiss-Prot
BLAST of Spo08598.1 vs. TAIR (Arabidopsis)

BLAST of Spo08598.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902143143\|gb\|KNA04823.1\|	3.8e-34	100.	hypothetical protein SOVF_1961...	[more]
gi\|731343866\|ref\|XP_010683107.1\|	3.3e-30	90.5	PREDICTED: uncharacterized pro...	[more]
gi\|823249271\|ref\|XP_012457284.1\|	2.0e-27	78.6	PREDICTED: uncharacterized pro...	[more]
gi\|728831948\|gb\|KHG11391.1\|	3.4e-27	78.6	hypothetical protein F383_1193...	[more]
gi\|823163963\|ref\|XP_012481928.1\|	3.4e-27	78.6	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo08598.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QDQ5_SPIOL	2.6e-34	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C0J6_BETVU	2.3e-30	90.5	Uncharacterized protein OS=Bet...	[more]
A0A0D2UUT4_GOSRA	1.4e-27	78.6	Uncharacterized protein OS=Gos...	[more]
A0A0B0NJZ2_GOSAR	2.4e-27	78.6	Uncharacterized protein OS=Gos...	[more]
A0A0D2RFL9_GOSRA	2.4e-27	78.6	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo08598.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo08598.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G14615.1	6.2e-27	72.9	unknown protein	[more]
AT1G52825.1	1.3e-24	68.4	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018625	Protein Pet100	PFAM	PF09803	DUF2346	coord: 7..74 score: 2.2
None	No IPR available	PANTHER	PTHR35700	FAMILY NOT NAMED	coord: 2..74 score: 3.7
None	No IPR available	PANTHER	PTHR35700:SF1	SUBFAMILY NOT NAMED	coord: 2..74 score: 3.7

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033617	mitochondrial respiratory chain complex IV assembly
biological_process	GO:0006810	transport
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005643	nuclear pore