Spo08605.1 (mRNA) | SpinachBase

Overview


Name	Spo08605.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	(AT4g27310/M4I22_120) (At1g13990/F16A14.28)
Location	chr6 : 13809817 .. 13813320 (+)
Sequence length	1234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

NAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAATGGATTCTCTGTCCTCTGTATCTCCCTCAATCATGCTACCTCCCGTACGCCACCATCTCAACACTCCTCTTCTCAATTCCTTTCCTTCTCGGTGCTACAATCGCCCCGTCCTCTCACCTCCTTTGTCTTCCAATTCTTCGCTTTTGCAGAGGCGGAGGCGGAATGTTTGGGTGTTGCGCGCTAAATCGACCGGCAGCTCCGACGGTGGAGCCGTATTTAACGGTGGTGGTGAGGGAGGGAGTGATGATGATGATGATGCAGAGGTAGAAGAAGCTTTGCAATTGGATGGGACTATTCCTGGAACTTCCGATGAGTTTGTGAAGCAGGTTTCGTCTCGTGCTTATGGTATCCGCCGCCATCTCCACCAGTCTCTCGATTCCAGTAGTTACGATGGTACCCTTTTCTCTTTCTCCAGAATTTAATTCTTATTAAGTTTATTAACTTATGATGTTGATACGATATGGTTATATTAGAGTTGTAATTTTGGATGATAGTGTTAGACTGTTAGTATTTGATCGTACATGTGAGTTGTTGTTGTTGCTGACATATTCGGAATTTGATGATTTGATTTTCTTGCAATTGTTTAAGATATTGTGAAAAGCTACAAATTTGGGTTATTTGACGATCTTCAGAAATTAAGATGTGAAAATGGTGGAGGAGTTTGGGTCTTGGTATGGTACTTTGCATTTTGCAAACTGTTGAAGCGGTTGAATTGTTGCTTGTTATCATGAGTTTGATGTAGAAGTTTGACAATTTTGCGGTGTGTAAAGTTTCTTCAGTTTAGGGTAATGTTGCAATGGTAAGGTGCTTTGTGCTATATGTATTTAGAAGAAAAAAGTGTCATAAAGGAACATCAAACTTGAGGTGGAGTTATATATATCAGGGATTCCAGGTGCAAACTGCAAAGGTTGCTAGAAGCCAAGACTGTTTATAAATTGTTTTACAACATATTTTCTAATGATCGTGAAAGGCATTGTTGTTATCCGGTTGATAAAAATAGTTTCTCCTATTGCCAATTTTCCATGAAGGAGTGAATCATAAATCAAATAACAGAACGGGAGGAATATTGGTCAGTAGTTAAGTACTCGTTGATCAATTGAAGTTCAATGCTATGTGGAGGTTAGTTCCTCCAAAGGGTGCTTGGGGCGTGTTCTTTAATACGAAGTACTTCGAAGTATAAAACTAAGACTCTTAGTTCTAGAATTACCTAGAGTAGTAGACACTTGAAATCGATACAAATTAACAATATTTCAAAAGTTCACAGCAGGGTAGAGAGGGGCTGCTGAAAACTCCTGACTAATATGAGTAAACTCCCTACTGGGATAAATCTTACCCTTTTTACGCAAGTATGGAGGAAGATTTTTGCTACAAAAGGGCTAGTTATGGAATAACGTGAAGAGATTGACCTGTCAATCCCCTTCATGTAAAGCTTCCTAGCATTGCAATGCATTTGAACTGTTTCAACTTGTCTAAAGACTAATGCAAGTATAACATTACATCATCATGGTGGACACATTTACGAAGCAGGGTGTACACTGTCACTCATATGGAGGAGGACTGGAGGATTTTAATGAAAGCATGGCTGTATCTGTATGAGAATCTTTTACTTTAGGAAAGCTCTAACTAAGATAGCAATTATTTTCCTTATTTGTCCATTAACAAGTGTGTTAGTTCATGTGCGAAGGTTGCTTAATGTCATTTTTTTTACCTCGTTTTTCACTTCTGAGATTTACCAGTGACATAAAGCAAGTCCCTTAACTCTACTGTGTTTCGTCCGATGAGTGCTGGATCCTGTTTAACATTTTCTAAATTAAAGGCAAGTTGTTGATTAAGTTGTATATGAAGTGTTGTAAATTTAAGTAAGTGAAAACACTGAAAGGGGGGAAGGAAAAAAATCACATTGGTCAACTGCTGACTACGAAATGTGCATGTCAAATCACAAGATGTTCTGGAATGTGGATGCATATATCTTTTTGTTGCTTTTCGTAATGCGAGTGGCTGTTACTTAATATGCCTATGTCACTTAATTATTGTACCATACTACCATGTGTATTTCTGTTTGTTAAAAAAATGCGTTATTTTGCCTTTTCTTAGTTCTGGATGACAATCCTTGGAGGGATACGTCAAAACCTGTGTATGTCCTAACCCAGAAGGAAAACCAACTGTGCACAATGAAAACTCGAAGGAGCCGCAGGTTTGATAGTGCCTCTTCTTAAAAAGTTACAAATTATCTGCCATCTCAATCTGTGAAACTGGTTAGCTGTTTCCATGTTAACATCTGGAACTCTGGATTTCTTGCTATAGTGAAGTTGAAAGGGAGCTTGGTTTATTATTTTCAAAGGGGCGCAAATTTGGTTCAGACTTTGGCAATCAGACCAAGCAATCAAGAAATGGCAATAAATTTCAAATGGTTGTGGAGGACGTGAGGGAGGGAATACTTGTAAGCCCTTTTTCCCCCTACTTTATTCTTTGTATTGTTTGTTACAGTATGTGTTTCCTCTTATTTGGGGTTGGCGAGGTGGATCGCCGCTTCTGAATCCTTTATATGATTTTAAGATGTGGATAGAAACATTCACCCCGAAATGTGAAATAAATTCCCGCTGTTTCTGGGCGTTTAGTTCTAGTTAAACTGTCAAAGTGTCAAGTACATAGAATTATTTGAACTCAATTCGTTAAGTATGCACTCAACTTTCTGAAATTTTCGGCCCCAAGCCTTGGGACAGTTGGATTATGCATAAAAGTAGAACTAATGTGGTTATGACACCCCAAGTTGAGGTAAAAATGGAAATAATACCACTTAACGTAAGTTTTTTGTCAAAACAGATATTTGAAGACCAAAATGAAGCAGTAAGATACTGTGACCTGATGCAAGGCGGGGGTCAAGGTTGTGAAGGTGTTGCAGAGATAGAAGCATCTTCTGTAAGAAATTTAACCATGTCTGCTAATAGTCATTGTCCAATTTAAAGCCAGAATTAGATATTAATTAATTGTACAGGTTTTTGATCTCTGCCGAAAGTCAAGAGCTCTGGTTGTTCTATTCCGCAGAGGCAGGACACCACCTCAACCCGAGAGCTTGCAACTTAACTTGAGAGCTCGAAAGCGATCCCTTGAAGACTAACATGGTTCACCTGTGCAGAATTGTATAGAAAAACAGGTATTTGAAAGCGGGATACAAGAACATAGTGTAGTAATACAGTAATTGTAATGTATATAGTATACACAACTAAAAGTCATACATCAATGTAATTGCATACTTGTAAATGTTATCTTTGTCGTCATTGATTCTCTTCTCTAATCCCCTTATTCCCCTATATTTAAGCTTGTGTCAATTCTCCTCTGCTTTGAAGACTGGCTGCTCCGTCGAACTTGACTTTTCCGCTGATAGAGACTTAGAGAGATCCTTGGCATATTCCATGTTTCTGTTTAATTATGAACATGCAGCTAGAATAGTCAATTGCTTACAAC

mRNA sequence

NAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAATGGATTCTCTGTCCTCTGTATCTCCCTCAATCATGCTACCTCCCGTACGCCACCATCTCAACACTCCTCTTCTCAATTCCTTTCCTTCTCGGTGCTACAATCGCCCCGTCCTCTCACCTCCTTTGTCTTCCAATTCTTCGCTTTTGCAGAGGCGGAGGCGGAATGTTTGGGTGTTGCGCGCTAAATCGACCGGCAGCTCCGACGGTGGAGCCGTATTTAACGGTGGTGGTGAGGGAGGGAGTGATGATGATGATGATGCAGAGGTAGAAGAAGCTTTGCAATTGGATGGGACTATTCCTGGAACTTCCGATGAGTTTGTGAAGCAGGTTTCGTCTCGTGCTTATGGTATCCGCCGCCATCTCCACCAGTCTCTCGATTCCAGTAGTTACGATGTTCTGGATGACAATCCTTGGAGGGATACGTCAAAACCTGTGTATGTCCTAACCCAGAAGGAAAACCAACTGTGCACAATGAAAACTCGAAGGAGCCGCAGTGAAGTTGAAAGGGAGCTTGGTTTATTATTTTCAAAGGGGCGCAAATTTGGTTCAGACTTTGGCAATCAGACCAAGCAATCAAGAAATGGCAATAAATTTCAAATGGTTGTGGAGGACGTGAGGGAGGGAATACTTATATTTGAAGACCAAAATGAAGCAGTAAGATACTGTGACCTGATGCAAGGCGGGGGTCAAGGTTGTGAAGGTGTTGCAGAGATAGAAGCATCTTCTGTTTTTGATCTCTGCCGAAAGTCAAGAGCTCTGGTTGTTCTATTCCGCAGAGGCAGGACACCACCTCAACCCGAGAGCTTGCAACTTAACTTGAGAGCTCGAAAGCGATCCCTTGAAGACTAACATGGTTCACCTGTGCAGAATTGTATAGAAAAACAGGTATTTGAAAGCGGGATACAAGAACATAGTGTAGTAATACAGTAATTGTAATGTATATAGTATACACAACTAAAAGTCATACATCAATGTAATTGCATACTTGTAAATGTTATCTTTGTCGTCATTGATTCTCTTCTCTAATCCCCTTATTCCCCTATATTTAAGCTTGTGTCAATTCTCCTCTGCTTTGAAGACTGGCTGCTCCGTCGAACTTGACTTTTCCGCTGATAGAGACTTAGAGAGATCCTTGGCATATTCCATGTTTCTGTTTAATTATGAACATGCAGCTAGAATAGTCAATTGCTTACAAC

Coding sequence (CDS)

ATGGATTCTCTGTCCTCTGTATCTCCCTCAATCATGCTACCTCCCGTACGCCACCATCTCAACACTCCTCTTCTCAATTCCTTTCCTTCTCGGTGCTACAATCGCCCCGTCCTCTCACCTCCTTTGTCTTCCAATTCTTCGCTTTTGCAGAGGCGGAGGCGGAATGTTTGGGTGTTGCGCGCTAAATCGACCGGCAGCTCCGACGGTGGAGCCGTATTTAACGGTGGTGGTGAGGGAGGGAGTGATGATGATGATGATGCAGAGGTAGAAGAAGCTTTGCAATTGGATGGGACTATTCCTGGAACTTCCGATGAGTTTGTGAAGCAGGTTTCGTCTCGTGCTTATGGTATCCGCCGCCATCTCCACCAGTCTCTCGATTCCAGTAGTTACGATGTTCTGGATGACAATCCTTGGAGGGATACGTCAAAACCTGTGTATGTCCTAACCCAGAAGGAAAACCAACTGTGCACAATGAAAACTCGAAGGAGCCGCAGTGAAGTTGAAAGGGAGCTTGGTTTATTATTTTCAAAGGGGCGCAAATTTGGTTCAGACTTTGGCAATCAGACCAAGCAATCAAGAAATGGCAATAAATTTCAAATGGTTGTGGAGGACGTGAGGGAGGGAATACTTATATTTGAAGACCAAAATGAAGCAGTAAGATACTGTGACCTGATGCAAGGCGGGGGTCAAGGTTGTGAAGGTGTTGCAGAGATAGAAGCATCTTCTGTTTTTGATCTCTGCCGAAAGTCAAGAGCTCTGGTTGTTCTATTCCGCAGAGGCAGGACACCACCTCAACCCGAGAGCTTGCAACTTAACTTGAGAGCTCGAAAGCGATCCCTTGAAGACTAA

Protein sequence

MDSLSSVSPSIMLPPVRHHLNTPLLNSFPSRCYNRPVLSPPLSSNSSLLQRRRRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQVSSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERELGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQGCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08605	Spo08605	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08605.1	Spo08605.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08605.1.exon.1	Spo08605.1.exon.1	exon
Spo08605.1.exon.2	Spo08605.1.exon.2	exon
Spo08605.1.exon.3	Spo08605.1.exon.3	exon
Spo08605.1.exon.4	Spo08605.1.exon.4	exon
Spo08605.1.exon.5	Spo08605.1.exon.5	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08605.1.utr5p.1	Spo08605.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08605.1.CDS.1	Spo08605.1.CDS.1	CDS
Spo08605.1.CDS.2	Spo08605.1.CDS.2	CDS
Spo08605.1.CDS.3	Spo08605.1.CDS.3	CDS
Spo08605.1.CDS.4	Spo08605.1.CDS.4	CDS
Spo08605.1.CDS.5	Spo08605.1.CDS.5	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08605.1.utr3p.1	Spo08605.1.utr3p.1	three_prime_UTR

Homology

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BLAST of Spo08605.1 vs. NCBI nr
Match: gi|902188583|gb|KNA11195.1| (hypothetical protein SOVF_137440, partial [Spinacia oleracea])

HSP 1 Score: 456.4 bits (1173), Expect = 3.500e-125
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1


		  
Query: 51  RRRRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV 110
           RRRRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV
Sbjct: 1   RRRRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV 60

Query: 111 SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE 170
           SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE
Sbjct: 61  SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE 120

Query: 171 LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ 230
           LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ
Sbjct: 121 LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ 180

Query: 231 GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED
Sbjct: 181 GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 232

[Close]

BLAST of Spo08605.1 vs. NCBI nr
Match: gi|731343878|ref|XP_010683114.1| (PREDICTED: uncharacterized protein LOC104897854 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 413.3 bits (1061), Expect = 3.400e-112
Identity = 222/282 (78.72%), Postives = 238/282 (84.40%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLPPVRHHLNTPLLNSFPSRCYNRPVLSPPLSSNSSLLQRRRRNVWVLR 60
           MDSLSSVSPSIMLPP+RHHLN P         YN   LSPP SSN S+  ++ RNV VLR
Sbjct: 1   MDSLSSVSPSIMLPPLRHHLNIPTN-------YNYTFLSPPFSSNFSISVKKMRNVPVLR 60

Query: 61  AKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQVSSRAYGIRRH 120
            KS  SSDG +  NG  E  SDD    EVE AL+LDG+IPGTSDEF++QVSSRAY IRRH
Sbjct: 61  GKSISSSDGES--NGDDEVSSDD---VEVERALRLDGSIPGTSDEFLEQVSSRAYDIRRH 120

Query: 121 LHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERELGLLFSKGRK 180
           LHQSLDSS YDVLDDNPWR+TSKPVYVLTQKENQLCTMKTRR+RSEVERELG+LFSKG K
Sbjct: 121 LHQSLDSSCYDVLDDNPWRETSKPVYVLTQKENQLCTMKTRRNRSEVERELGMLFSKGSK 180

Query: 181 FGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQGCEGVAEIEA 240
             S+FGNQTKQSR   KFQMVVEDVREGIL+FEDQNEA R+CDLMQGGGQGCEGVAEIEA
Sbjct: 181 RSSEFGNQTKQSRGSKKFQMVVEDVREGILVFEDQNEAERFCDLMQGGGQGCEGVAEIEA 240

Query: 241 SSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           SSVFDLCRKSRAL VLFRRGRTPPQPE+LQLNLRARKRSLED
Sbjct: 241 SSVFDLCRKSRALAVLFRRGRTPPQPENLQLNLRARKRSLED 270

[Close]

BLAST of Spo08605.1 vs. NCBI nr
Match: gi|566191275|ref|XP_002315031.2| (hypothetical protein POPTR_0010s17160g [Populus trichocarpa])

HSP 1 Score: 354.0 bits (907), Expect = 2.400e-94
Identity = 200/292 (68.49%), Postives = 227/292 (77.74%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLP-PVRHHLNTPLLNSFPSRCYNRPVLSPPLSSNSSL-----LQRR-- 60
           MDSL+SVSPS++LP P+R      +LNS      NR +  P +SS SS      L RR  
Sbjct: 1   MDSLTSVSPSMVLPLPLRRRR---VLNSSSFSANNRRLPPPRISSFSSASHPLDLSRRSS 60

Query: 61  --RRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV 120
             RR V    A  +G  D  A      E  S+DD   EVE AL LDGTIPGTS+EFVKQV
Sbjct: 61  RSRRRVSCRLASGSGDGDRDAK----EEDNSNDDGSEEVERALHLDGTIPGTSNEFVKQV 120

Query: 121 SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE 180
           SSRAY +RRHL QS DSSSYDVLD NPWR+TSKPVYVLTQ+ENQLCTMKTRR+RSEVE+E
Sbjct: 121 SSRAYDMRRHLQQSFDSSSYDVLDANPWRETSKPVYVLTQRENQLCTMKTRRNRSEVEKE 180

Query: 181 LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ 240
           LGLLFSKG K+ S+ G+QTKQSR G KFQM+VEDVREG+L+FED+NEAVRYCDL+QGGG+
Sbjct: 181 LGLLFSKGGKWRSEIGSQTKQSRRGTKFQMLVEDVREGVLVFEDENEAVRYCDLLQGGGK 240

Query: 241 GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           GCEGVAEIEASSVFDLC+K RAL VLFRRGRTPP P+SL+LNLRARKRSLED
Sbjct: 241 GCEGVAEIEASSVFDLCQKMRALAVLFRRGRTPPLPQSLELNLRARKRSLED 285

[Close]

BLAST of Spo08605.1 vs. NCBI nr
Match: gi|743799288|ref|XP_011012791.1| (PREDICTED: uncharacterized protein LOC105116966 isoform X1 [Populus euphratica])

HSP 1 Score: 352.4 bits (903), Expect = 7.100e-94
Identity = 201/292 (68.84%), Postives = 228/292 (78.08%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLP-PVRHHLNTPLLNSFPSRCYNRPVLSPPLSSNSSL-----LQRR-- 60
           MDSL+SVSPS++LP P+R      +LNS      NR  L P +SS SS      L RR  
Sbjct: 1   MDSLTSVSPSMVLPLPLRRRR---VLNSSSFSANNRR-LPPRISSFSSASHPLDLSRRSS 60

Query: 61  --RRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV 120
             RR V    A  +G  D  A      E  S+DD+  EVE AL LDGTIPGTS+EFVKQV
Sbjct: 61  RSRRRVSCRLASGSGDGDRDAK----EEDNSNDDESEEVERALHLDGTIPGTSNEFVKQV 120

Query: 121 SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE 180
           SSRAY +RRHL QS DSSSYDVLD NPWR+TSKPVYVLTQ+ENQLCTMKTRR+RSEVE+E
Sbjct: 121 SSRAYDMRRHLQQSFDSSSYDVLDANPWRETSKPVYVLTQRENQLCTMKTRRNRSEVEKE 180

Query: 181 LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ 240
           LGLLFSKG K+ S+ G+QTKQSR G KFQM+VEDVREG+L+FED+NEAVRYCDL+QGGG+
Sbjct: 181 LGLLFSKGGKWRSEIGSQTKQSRRGTKFQMLVEDVREGVLVFEDENEAVRYCDLLQGGGK 240

Query: 241 GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           GCEGVAEIEASSVFDLC+K RAL VLFRRGRTPP P+SL+LNLRARKRSLED
Sbjct: 241 GCEGVAEIEASSVFDLCQKMRALAVLFRRGRTPPLPQSLELNLRARKRSLED 284

[Close]

BLAST of Spo08605.1 vs. NCBI nr
Match: gi|1012171440|ref|XP_015965809.1| (PREDICTED: uncharacterized protein LOC107489574, partial [Arachis duranensis])

HSP 1 Score: 344.4 bits (882), Expect = 1.900e-91
Identity = 192/294 (65.31%), Postives = 224/294 (76.19%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLPPV----RHHLNTPLLNSFPSRCYNRPVLSPPLSSNSSLLQR----- 60
           MDSLS+VSPS++LPP+    RH  +  L        ++R  L P L S+S+   +     
Sbjct: 42  MDSLSTVSPSMVLPPLNPFNRHTRHLAL--------FSRAPLPPSLLSSSTSFSKLFSIS 101

Query: 61  --RRRNVWVLRAKSTGS-SDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVK 120
             RRR     R  +  S S GGA    G +     D++ EVE AL +DGTIPGTSDEFVK
Sbjct: 102 FIRRRTRRTTRGLNDVSCSAGGADDVKGSKNDGGYDEEEEVERALHMDGTIPGTSDEFVK 161

Query: 121 QVSSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVE 180
           +VSSRAY +RRHL QS D+SSYDVLD NPWR+TSKPVYVLTQKENQL TMKTRR+RSEVE
Sbjct: 162 RVSSRAYDMRRHLQQSFDTSSYDVLDSNPWRETSKPVYVLTQKENQLWTMKTRRNRSEVE 221

Query: 181 RELGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGG 240
           RELGLLFSKG  + S  GNQ+KQ+R G KFQM+VED+REG+L+FED+NEAV+YCDL+QGG
Sbjct: 222 RELGLLFSKGGNWRSGLGNQSKQARGGTKFQMLVEDIREGVLVFEDENEAVKYCDLLQGG 281

Query: 241 GQGCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           GQGCEGVAEIEASS+FDLC+K RAL VLFRRGRTPP PESLQLNLRARKRSLED
Sbjct: 282 GQGCEGVAEIEASSIFDLCQKMRALAVLFRRGRTPPLPESLQLNLRARKRSLED 327

[Close]

BLAST of Spo08605.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QVB4_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_137440 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.400e-125
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1


		  
Query: 51  RRRRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV 110
           RRRRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV
Sbjct: 1   RRRRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV 60

Query: 111 SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE 170
           SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE
Sbjct: 61  SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE 120

Query: 171 LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ 230
           LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ
Sbjct: 121 LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ 180

Query: 231 GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED
Sbjct: 181 GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 232

[Close]

BLAST of Spo08605.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C4R8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g153350 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 2.400e-112
Identity = 222/282 (78.72%), Postives = 238/282 (84.40%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLPPVRHHLNTPLLNSFPSRCYNRPVLSPPLSSNSSLLQRRRRNVWVLR 60
           MDSLSSVSPSIMLPP+RHHLN P         YN   LSPP SSN S+  ++ RNV VLR
Sbjct: 1   MDSLSSVSPSIMLPPLRHHLNIPTN-------YNYTFLSPPFSSNFSISVKKMRNVPVLR 60

Query: 61  AKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQVSSRAYGIRRH 120
            KS  SSDG +  NG  E  SDD    EVE AL+LDG+IPGTSDEF++QVSSRAY IRRH
Sbjct: 61  GKSISSSDGES--NGDDEVSSDD---VEVERALRLDGSIPGTSDEFLEQVSSRAYDIRRH 120

Query: 121 LHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERELGLLFSKGRK 180
           LHQSLDSS YDVLDDNPWR+TSKPVYVLTQKENQLCTMKTRR+RSEVERELG+LFSKG K
Sbjct: 121 LHQSLDSSCYDVLDDNPWRETSKPVYVLTQKENQLCTMKTRRNRSEVERELGMLFSKGSK 180

Query: 181 FGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQGCEGVAEIEA 240
             S+FGNQTKQSR   KFQMVVEDVREGIL+FEDQNEA R+CDLMQGGGQGCEGVAEIEA
Sbjct: 181 RSSEFGNQTKQSRGSKKFQMVVEDVREGILVFEDQNEAERFCDLMQGGGQGCEGVAEIEA 240

Query: 241 SSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           SSVFDLCRKSRAL VLFRRGRTPPQPE+LQLNLRARKRSLED
Sbjct: 241 SSVFDLCRKSRALAVLFRRGRTPPQPENLQLNLRARKRSLED 270

[Close]

BLAST of Spo08605.1 vs. UniProtKB/TrEMBL
Match: B9HXP6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s17160g PE=4 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.700e-94
Identity = 200/292 (68.49%), Postives = 227/292 (77.74%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLP-PVRHHLNTPLLNSFPSRCYNRPVLSPPLSSNSSL-----LQRR-- 60
           MDSL+SVSPS++LP P+R      +LNS      NR +  P +SS SS      L RR  
Sbjct: 1   MDSLTSVSPSMVLPLPLRRRR---VLNSSSFSANNRRLPPPRISSFSSASHPLDLSRRSS 60

Query: 61  --RRNVWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQV 120
             RR V    A  +G  D  A      E  S+DD   EVE AL LDGTIPGTS+EFVKQV
Sbjct: 61  RSRRRVSCRLASGSGDGDRDAK----EEDNSNDDGSEEVERALHLDGTIPGTSNEFVKQV 120

Query: 121 SSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERE 180
           SSRAY +RRHL QS DSSSYDVLD NPWR+TSKPVYVLTQ+ENQLCTMKTRR+RSEVE+E
Sbjct: 121 SSRAYDMRRHLQQSFDSSSYDVLDANPWRETSKPVYVLTQRENQLCTMKTRRNRSEVEKE 180

Query: 181 LGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQ 240
           LGLLFSKG K+ S+ G+QTKQSR G KFQM+VEDVREG+L+FED+NEAVRYCDL+QGGG+
Sbjct: 181 LGLLFSKGGKWRSEIGSQTKQSRRGTKFQMLVEDVREGVLVFEDENEAVRYCDLLQGGGK 240

Query: 241 GCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           GCEGVAEIEASSVFDLC+K RAL VLFRRGRTPP P+SL+LNLRARKRSLED
Sbjct: 241 GCEGVAEIEASSVFDLCQKMRALAVLFRRGRTPPLPQSLELNLRARKRSLED 285

[Close]

BLAST of Spo08605.1 vs. UniProtKB/TrEMBL
Match: A0A067KYI5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15648 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.500e-90
Identity = 192/284 (67.61%), Postives = 217/284 (76.41%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLPPVRH--HLNTPLLNSFPSRCYNRPVLSPPLSSNSSLLQRRRRNVWV 60
           MDSL+SVSPSI+LPP +        +  +  S  YN   L P L  + S +  RRR  W 
Sbjct: 1   MDSLASVSPSIVLPPSKPLPTRRRSISTASSSSAYN---LRPRLFISYSSVSSRRR--WT 60

Query: 61  LRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQVSSRAYGIR 120
            R     S DG A      E   +DD   EV+ AL LDGTIPGTS+EFVKQVSSRAY +R
Sbjct: 61  -RVSCKLSGDGRA---NRPEDDEEDDGQEEVDRALHLDGTIPGTSNEFVKQVSSRAYDMR 120

Query: 121 RHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVERELGLLFSKG 180
           RHL Q+ DSSSYDVLD NPWR+TSKPVYVLT +ENQLCTMKTRR+RSEVERELGLLFSKG
Sbjct: 121 RHLQQTFDSSSYDVLDVNPWRETSKPVYVLTHRENQLCTMKTRRNRSEVERELGLLFSKG 180

Query: 181 RKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGGGQGCEGVAEI 240
            K  S+ GNQ KQ R G KFQM+VEDVREG+L+FED+NEAVRYCDL+QGGG+GCEGVAEI
Sbjct: 181 GKRRSEMGNQAKQPRRGTKFQMLVEDVREGVLVFEDENEAVRYCDLLQGGGKGCEGVAEI 240

Query: 241 EASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           EASSVFDLC+K RAL VLFRRGRTPP P+SL+LNLRARKRSLED
Sbjct: 241 EASSVFDLCQKMRALAVLFRRGRTPPLPQSLELNLRARKRSLED 275

[Close]

BLAST of Spo08605.1 vs. UniProtKB/TrEMBL
Match: A0A0D2W0S5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G186400 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.500e-90
Identity = 190/294 (64.63%), Postives = 222/294 (75.51%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLPPVRHHLNTPLLNSFPSRCYNRP-VLSPPLSSNSSLLQRRRRNVWVL 60
           MDSLSSVSPSI+LPP          N+ P+R  +RP V++   ++N+ L +        L
Sbjct: 1   MDSLSSVSPSIVLPPT---------NTLPTRRRHRPQVVAFSFATNTRLPRLSSFFGVKL 60

Query: 61  RAKSTGSSDGGAVFNGG--------GEGGSDDDDDAE---VEEALQLDGTIPGTSDEFVK 120
           + +     D    FNGG        G GG+DDD D E   VE AL LDGTIP TS EF++
Sbjct: 61  KGRLNRVVDCKCKFNGGDARRGEEDGHGGNDDDVDGEKEEVERALHLDGTIPSTSSEFLR 120

Query: 121 QVSSRAYGIRRHLHQSLDSSSYDVLDDNPWRDTSKPVYVLTQKENQLCTMKTRRSRSEVE 180
           +VSSRAY +RRHL QS DSSSYDVL+ NPWRD SKPVYVLT KENQLCTMKTRR+RSEVE
Sbjct: 121 RVSSRAYDMRRHLQQSFDSSSYDVLEANPWRDPSKPVYVLTHKENQLCTMKTRRNRSEVE 180

Query: 181 RELGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVEDVREGILIFEDQNEAVRYCDLMQGG 240
            ELGLLFSKG K  S FGN+T+Q R+G KF+M+VEDVREG+L+FED+NEA +YCDLMQGG
Sbjct: 181 TELGLLFSKGGKRSSGFGNKTEQPRSGTKFEMLVEDVREGVLVFEDENEAAKYCDLMQGG 240

Query: 241 GQGCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPPQPESLQLNLRARKRSLED 283
           GQGCEGVAEI+ASSVFDLCR  RALVVLFRRGRTPP P+SL+LNL+ARKRSLED
Sbjct: 241 GQGCEGVAEIDASSVFDLCRTVRALVVLFRRGRTPPLPQSLELNLKARKRSLED 285

[Close]

BLAST of Spo08605.1 vs. TAIR (Arabidopsis)
Match: AT1G13990.3 (unknown protein)

HSP 1 Score: 232.6 bits (592), Expect = 2.900e-61
Identity = 156/318 (49.06%), Postives = 194/318 (61.01%), Query Frame = 1


		  
Query: 1   MDSLSSVSPSIMLPP-----VRHHLNTPLLNSFPSRCYNRPVLSPPLSSNSSLLQRRRRN 60
           M+SL+S+SPSI+LPP     +    +  +L   PSR   R      LSS+   +   RR 
Sbjct: 1   MESLTSISPSIILPPATTTTIPVSTSRSVLIRLPSR---RSSYLFGLSSSGRRISISRRR 60

Query: 61  VWVLRAKSTGSSDGGAVFNGGGEGGSDDDDDAEVEEALQLDGTIPGTSDEFVKQVSSRAY 120
            +V   KSTG   GG+   GG     D+++  EVE+AL LDGTIPGTSDEFV+QVSSRAY
Sbjct: 61  HFV-SCKSTGGGGGGSDKLGG-----DEEESEEVEKALHLDGTIPGTSDEFVRQVSSRAY 120

Query: 121 GIRRHLHQSLDSSSYD------------------VLDDN------PWRDTSKPVYVLTQK 180
            +RR L Q+ DS+SYD                  VL  N       + D++   +  T  
Sbjct: 121 DMRRKLEQTFDSTSYDEFLKDCLGSLGTVFPRRRVLQLNYDEENCSFLDSTLTCWSPTHG 180

Query: 181 EN-------QLCTMKTRRSRSEVERELGLLFSKGRKFGSDFGNQTKQSRNGNKFQMVVED 240
           E         L         SEVE+ELGLLF       S   NQTKQ+R   KF M+VED
Sbjct: 181 EEIRSLFSFLLPMTLAILINSEVEKELGLLFP------SRISNQTKQARPKTKFDMLVED 240

Query: 241 VREGILIFEDQNEAVRYCDLMQGGGQGCEGVAEIEASSVFDLCRKSRALVVLFRRGRTPP 283
           +R+G+L+FED NEAVRYCDL+QGGG+GCEGVAEIEASSVFDLCRK+R+L VLFRRGRTPP
Sbjct: 241 IRDGVLVFEDVNEAVRYCDLLQGGGKGCEGVAEIEASSVFDLCRKTRSLAVLFRRGRTPP 300

The following BLAST results are available for this feature:

BLAST of Spo08605.1 vs. NCBI nr
BLAST of Spo08605.1 vs. UniProtKB/TrEMBL
BLAST of Spo08605.1 vs. ExPASy Swiss-Prot
BLAST of Spo08605.1 vs. TAIR (Arabidopsis)

BLAST of Spo08605.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902188583\|gb\|KNA11195.1\|	3.5e-125	100.	hypothetical protein SOVF_1374...	[more]
gi\|731343878\|ref\|XP_010683114.1\|	3.4e-112	78.7	PREDICTED: uncharacterized pro...	[more]
gi\|566191275\|ref\|XP_002315031.2\|	2.4e-94	68.4	hypothetical protein POPTR_001...	[more]
gi\|743799288\|ref\|XP_011012791.1\|	7.1e-94	68.8	PREDICTED: uncharacterized pro...	[more]
gi\|1012171440\|ref\|XP_015965809.1\|	1.9e-91	65.3	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo08605.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QVB4_SPIOL	2.4e-125	100.	Uncharacterized protein (Fragm...	[more]
A0A0J8C4R8_BETVU	2.4e-112	78.7	Uncharacterized protein OS=Bet...	[more]
B9HXP6_POPTR	1.7e-94	68.4	Uncharacterized protein OS=Pop...	[more]
A0A067KYI5_JATCU	1.5e-90	67.6	Uncharacterized protein OS=Jat...	[more]
A0A0D2W0S5_GOSRA	2.5e-90	64.6	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo08605.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo08605.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G13990.3	2.9e-61	49.0	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37178	FAMILY NOT NAMED	coord: 2..282 score: 1.6E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009646	response to absence of light