Spo08715.1 (mRNA) | SpinachBase

Overview


Name	Spo08715.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	50S ribosomal protein L15, putative
Location	chr3 : 83241216 .. 83247316 (+)
Sequence length	1303

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATCACATTATGGGCTAAAAAAATACTTCATAGAGGCATTTCTCACAATACCAAATATCCACTTTCTGGACCCAATTTATCAAAGAAAACAGTTCAAAGCCCAAAAACCCTTAAAAAGAAGGAACCTCAAATCTCCATTATCCTATCCGTTAACTCCAGTCACTCCTGTAATCCAAAAACACCAACCTTGAACCTCCTCCAATGGCTTCTCTCCTTTCTCTCTCATCAACCCCTCCTTCCACTGCAAATTCTAACAACTACCCATCTTCTACTTTCAAAGGAAACATCAACAATTTCAGAATAAACCCATTCAATTTTGCCCCACTTAAACTCCATTTGAGGAACATCGTCAAAAAGGAAAGCACCCGTCTTGTAGTTGTAGCTTCTGCTTCTTCTTCAAATGTGAGTCCGAGTATTGGGTCGGGTTCAGAGACCAGGTTCAGGCTAGATAACCTCGGACCACAACCAGGTTCGAGGAAGAAGGGGAAAAGAAAGGGAAGAGGTCATGCTGCCGGTCAGGGAGGAAGCTGTGGGTTTGGAATGCGGGGTCAGAAATCGAGGTCTGGTCCTGGTATTATGAGGGGTTTTGAAGGTGGTCAGATGCCCCTTTATCGCCGAATTCCCAAATTGCGTGGTATTGCTGGAGGTAATTATCATACTTTGTACTATTTTTGGGCCTATTTTTGTTTTTTATCGACTAATTATTGTAAATTTCAATTTAATGTAGTTTTTGTTGCTTGTTGTTCTTGTTAATTTGAGTAATTCATTGTTTAATTGTACTGGTGGAGCACTTCTAAGGTGAAAATTCTGTTAGAATTTCGTTAAAAGGTGTATGCCAATCTTATTCTAGAAAATAAAACAGGTGAAGTTATAGGATATAATGCTCCAAATAGGAATCTAGAACAAAGAGATGTGGATAGGGGGTGTGCAATGGACAATACATTGAGATTTGTAATGATTGATTTTGTTGCATTTTGGGATGGGCTTAAGAAATTTAAATTGGGAATGGTGGTTTCTGTAATGTATATATGGCTTTTAATAGTCTAATACAACAGGTTGGTTTTTTTGCCGCGTGTGATAAGACAGCTCTGCTGCCTAGTATTTCCCATGTACGTATTTTTCTTTACAAATTTCCATTACCACTCATAAACATTATTGGACATTAACATGAGATTTCCCTTGTGTTGAAACCCAATGTTATCCACATGTGAGTTGTGTCCCACGTTGGAGAGAGAGCAGAGGAAATACCAACTTATAAGCTAGAGGAGTTACTCCCATTGTTGTCGATTGGTTTGAGTGTGGAACCCCTTTTGGGCTTGTAAGTTAAAACGAACTTCTCCTATTTGTGTTGCCCAGACCCATTATATATTGTAATAAATTTAACACGTTGTAAACTACTCCCTCCGTCTCTTTTTGTTCTTCTCATTTGGAATTTTTTTGTCAAAACCATTATCATTACAATTTATTAACCCATATCATGGGTTGTTAATGCATTCTTGACTTCTTATGTATCACTTGTGCTATTTTGAATTGTACTGTATTTTTTTAACATTACTTTGAAAGTTTTAAACCTCTTTTTCAAGGATAACCACCTCAAACAAGGCTCCTTTCCTCTTTAGGCATTCCTAAATAGTTAGACTTTGTAGGGTGACACCCATGATTTACCTTTTTAATAAAAGTTTCATGATTATCAAGGCAAGATATTGTTGGCAACATTCTTGAGTATTTTCCTTGCAATTTAGTATGCTTATTTTCAAGTTAAGAATTTTATACAATTTGCAGAGATGAATAGTATTTAAACTTAACATATACAAGTCTATTGTGCACCTAAGAAGAACATCGAGTCATGTAAGAATGTTTTGTCAAATGAGGTGGTTGATATTGAAGCCAATCATAAGATGATAGTTGGTCTCCAATGTTCCTTCTCATGGTGCCATTACTTCAGGAAATTTATCCTACTTTACGTTGTTCCGTTTCCCACACCCTAAAAACTAACCCTTTACCCTCACACACTTCTTCTACATGATATAAGAACCTGTCGAAGAAATTCTTGGCATGAAACTAAAAGCATAACCTGAAATAAAATTGTCCATTTCCCGAAAACATTGTTTCTGGAAATAACTCTGGAGAACAGTTTAATTAACTTCTAAATATTTAATGCTTACTCTTCACTTAGCTTGGAAGATAGATAAGGGGAGTTTAGTTTTGAGGCTGAAATATGAGCGTCGTTATATGAAAAAGATTTAAGTAAAATAAATCAATTGGTTGCTGCTTCAACTAGCTCTATTAGAACTTGTAGCACTGAAATTTCACTTTTTCAAAAAGAAATGCAGCATTGCAACTGTTGATGTTGTTACCAATAAAAGACTAAACATGTTTGTTTCTCCACGTTCATAGCTTGCTTGTGTCGCTGTCATCATCTATTCTCTCTCTCCCTCTCTCTTTGTAACTGTATTGATTCTTGCGTAAGGGGTGCTGCTATTTATTAAAAATAAAAGGCACTCAAATAAGAAGTCTGGGCTAGAATTGGATTTTTAGGGAGCATTAACCTCTTACTGTGAATGCCGTTAGACAATGCAGTTTCTAATTTATATTACCTCTTCATGTATAATTCTCCGGTGAGTGAAAATCTATAGCGTTGGGTGGAGACATGACTGGATCATATTCCCTCTCTTCGATGGAGGCTCTAGTTAAGATTTAGTAAATTGATGTCCATTGTTAATTAGTGGCTTCAGTTTCAACATAGAATCCCTCAGAATCGCATGTGTATCACACAGGTCTTACTTCCAGAGATACCTTTGCGTGACCCCTTTACAGGGATTTTCAATTAGAAAGCACAGAGTCATTAACTTGATCTTTGGTCTTAGTAAATCCAGTACAGAGCTCATGTTAATCTCCAACTTTCTTTCTAGTAATTAACTGGGTTCTTGTTAATTATCTTGGTATATATTTCTTAGATTCTGATCCTACTCATGATCTTTTAAGCCTTTGATTACTTTCTTTTTCCTTGATCCTGATCTAAGGCTCTTATTCTTTAAGCCTTTTATTACTTTCTATGTGTTGGAATTTCTGTTCGCAGAGTTCTATTCCTTAAAGTTTCAACTTTCAACTTGTTTTGAGGATGAACCAATTTCTATTTTAGCCATGTACACTGATGCCATTATCTTTCAACAGGAATGCGTGCTGGCTTGCCGAAGTATGTTCCTATTAACTTGAGAGACATAGAGGTTGCTGGATTTAAGGAAGGTGAAGAAGTATCGCTAGAGTCCTTGAAGGCAAAGGGTATAATCAATCCATCAGGGAGAGAAAGAAGGTTGCCATTGAAGGTAAGGGTGTTTTCTATGCTTAAGGCTGAAGAAAGTGTTTTATTTTTATCTTTTCCAATTGATGGTCTAAATGAGGTGCTACTGCCTTCACATGACTTCCCTCAAGTGTGAACCACGTTTGATTATATAATGTTAGATCATAGTTTGCCAACATGATGATAAACTACCGTGGTCACACATCTTAATCCTCATGCCTTAAGGTTTCATGCAAAAGGATTTCTCTCTTTCATAAATAAATAAATATAAATAAAGACTTCTGTCATGTTAGTTACTATCACTGTACCACTAGTCTTCTGATACTGTAGTGAAAAACTATGGATACTCTATTTGCAGTACGCATAGGACACTTTTATTTGTGTCTTTCCCCCAAGTTGATATGCCAAGTTTCTAACTATTTTGGACTTCCTAAATATTGACTCTCCCATGTGAAGTTAACCATTCAATACTATGTTAGTAATGTTACCAAGCTTGACTTCAGCAGTCTGCTAGTCCGACATAAGTCTCCTGCTAAGAGTCTGGTCATTCATCTTCTTTCATTCTGTAGTTGCTTCATATGGGAACTTCTTTATTTCCATTGTGACTAGCTTTTGCTTATTTACTGAATAGAATTTGCTGACTGAATTAATGGTGTACACTTGTACTTCATATGGTATTATCAATTGTATTTCCTTTTTCCCCTATAATGGAAGTTATAGAACAGTGCCTGTTGCTACTTTTTCTTGTGATACAGGTGACCTTAGATTCATTCACTAAAACTTTGGCTATGTTCTTTACTGATATGATTCTGCTCGGTCAAAAGGACTTCACATAATCTGAATGGTAATTTAGAGTCGAATGGACCTAAACAATTTTATCAAACAGACCAAACAATAAACCAAACTAGAAACGCTAGTATGGGCGAATAAGCATCTCATCTACTAACCTAATGTCCTTTATACACACAATATAAGAATCCTAAATTACATAAAATACAAACACCTAGTTATACTACGGCTCCTAATGAAAATCAGTACATTGTTTTTCTACACTTAAACTCCAATCCTTAAGGGACAGCCAAACCGTATAGGACTCCTACTAAAGCATTAAAAGATACTCCGTAAGACTTATTGCACGCCAAGAACAACTGATGTAGACTTTGAGTGTTGAACAAAGCTTCTCAAATTCACATCATTTACACTAAAGAAAACAAGCAAGTCTAATAAGTTTAGATAAGTGCTAGTAAAGGTTTAGATGAGGTGTAAGAAGCTCACGTGTTTTTAGGTAAGAGGAAAACACCTTAAGTAATAAGACTTTCCGAACCACTTTTTCACCTGTGTATATTGTTAAGTAAATGTATATGATTTGTGACCTTGATTTCAGTGGGTCTGATTTTCTAAAAAGCTTTGAAAACTTTCTTAAGATGGTACTTGTACTGATGTTCGAGCTTATTTTTAACAAGTTAACATGCTTGTTAGAGTTAGGTATTGGAATTACAGGGGATTGGATTTGAGAGACATGGCTGCTTGTGAAGGCCGTGACGTAAACTGATAATATATTAATGGTGCTGATATTGTCTCTAATAACTGTTTATTATGACAAGCAGAGAAAAGTAGTTTAGTAAACTGTATTGTCTGCCCTTTCAAAAGTAGTTTACTATGACATGCCAACTGGGCTATGACACAAGTAAATTAACTACCCTTTCCATTACTTCTTGGAGAATTGGCAAAAACATAAAGATGATTTTTATCCACAGATCTTTAATTACACAAACAGCAAAGTTGTAGAAATGCTAAACCCAAGTGAATAATCCAGTCTCCCTATTATTATGCCAATATTGCGTTTTATGAGAGTTACTGTTGGTCCACTTTTATCTGCATGTGAGTAGAAGACTGCTTCTCCTGGGCCACTCAATAGTTAGTAAATGCATATACAACAGTCTTACCACTTTTAACCAGGTCGTGATCATAAACTCCCTTTCTATGTGTGTAGCAAGCCAATAGCTTCATTTTCTTGGTCTTTTGTATGATGTTGGCGACATGTTGGCCTTGTTTGGCAATATCACCAATATGCTTTTGTGTTCGTTTACTCGTGCTTCTTGAGGACTGCATGTCGTTTATTAGTGCCCTTTTCTAGGAGTATGAAGTATGTGTTTCTTATCTTTCTATTGCTTTCTTCCTCCTTAATATGGGAACAACCAATTTGCTTATGTTCTGTAATTTAAAAAGAACAGGCATCCATCGCATATCATGATAATCATTTGAAGCTTACTATTTATGCCTTCTTCTTTACAGATTCTTGGTGAAGGAGAATTAAGCACGAAGCTGCAAATAAAGGCACGTGCTTTCTCAGGATCAGCAAAAGAAAAGCTCGAGGCTGCAGGCTGTTCTGTCACAGTACTACCTGGAAGAAAGAAGTACATCAAAGAATCAGTAAGGAAGAACCTTGCTCGTGCTGATGAATACTTTGCAAAGAAACGAGCTGCGTCTGCCAGCGAAGCTGAGTCTGCTTAAATTTTATATTAGTGATACTTAAGATCATCAAAAATGTATGTAAAGTGTATCCCATTCATTTTTGTTCTCTAATGGTTTGTTGTAGAGCTCTTTATTTCTTTTACCCCAGGATTTGAGGTTTAAGGTGTAATCATTAATTTGCATATTTTGCTCAAGTATCACTCCATTGATTGTGTCTTCTTCTCGTTCGTATAGTGGAGTATCTTTAATTGCGTTGTCGTAATGAAAACCAACAAAATTGATTATCATCTGTTTTTGAGGGACTTATCCTTATCTCTTCACCTG

mRNA sequence

GTATCACATTATGGGCTAAAAAAATACTTCATAGAGGCATTTCTCACAATACCAAATATCCACTTTCTGGACCCAATTTATCAAAGAAAACAGTTCAAAGCCCAAAAACCCTTAAAAAGAAGGAACCTCAAATCTCCATTATCCTATCCGTTAACTCCAGTCACTCCTGTAATCCAAAAACACCAACCTTGAACCTCCTCCAATGGCTTCTCTCCTTTCTCTCTCATCAACCCCTCCTTCCACTGCAAATTCTAACAACTACCCATCTTCTACTTTCAAAGGAAACATCAACAATTTCAGAATAAACCCATTCAATTTTGCCCCACTTAAACTCCATTTGAGGAACATCGTCAAAAAGGAAAGCACCCGTCTTGTAGTTGTAGCTTCTGCTTCTTCTTCAAATGTGAGTCCGAGTATTGGGTCGGGTTCAGAGACCAGGTTCAGGCTAGATAACCTCGGACCACAACCAGGTTCGAGGAAGAAGGGGAAAAGAAAGGGAAGAGGTCATGCTGCCGGTCAGGGAGGAAGCTGTGGGTTTGGAATGCGGGGTCAGAAATCGAGGTCTGGTCCTGGTATTATGAGGGGTTTTGAAGGTGGTCAGATGCCCCTTTATCGCCGAATTCCCAAATTGCGTGGTATTGCTGGAGGAATGCGTGCTGGCTTGCCGAAGTATGTTCCTATTAACTTGAGAGACATAGAGGTTGCTGGATTTAAGGAAGGTGAAGAAGTATCGCTAGAGTCCTTGAAGGCAAAGGGTATAATCAATCCATCAGGGAGAGAAAGAAGGTTGCCATTGAAGATTCTTGGTGAAGGAGAATTAAGCACGAAGCTGCAAATAAAGGCACGTGCTTTCTCAGGATCAGCAAAAGAAAAGCTCGAGGCTGCAGGCTGTTCTGTCACAGTACTACCTGGAAGAAAGAAGTACATCAAAGAATCAGTAAGGAAGAACCTTGCTCGTGCTGATGAATACTTTGCAAAGAAACGAGCTGCGTCTGCCAGCGAAGCTGAGTCTGCTTAAATTTTATATTAGTGATACTTAAGATCATCAAAAATGTATGTAAAGTGTATCCCATTCATTTTTGTTCTCTAATGGTTTGTTGTAGAGCTCTTTATTTCTTTTACCCCAGGATTTGAGGTTTAAGGTGTAATCATTAATTTGCATATTTTGCTCAAGTATCACTCCATTGATTGTGTCTTCTTCTCGTTCGTATAGTGGAGTATCTTTAATTGCGTTGTCGTAATGAAAACCAACAAAATTGATTATCATCTGTTTTTGAGGGACTTATCCTTATCTCTTCACCTG

Coding sequence (CDS)

ATGGCTTCTCTCCTTTCTCTCTCATCAACCCCTCCTTCCACTGCAAATTCTAACAACTACCCATCTTCTACTTTCAAAGGAAACATCAACAATTTCAGAATAAACCCATTCAATTTTGCCCCACTTAAACTCCATTTGAGGAACATCGTCAAAAAGGAAAGCACCCGTCTTGTAGTTGTAGCTTCTGCTTCTTCTTCAAATGTGAGTCCGAGTATTGGGTCGGGTTCAGAGACCAGGTTCAGGCTAGATAACCTCGGACCACAACCAGGTTCGAGGAAGAAGGGGAAAAGAAAGGGAAGAGGTCATGCTGCCGGTCAGGGAGGAAGCTGTGGGTTTGGAATGCGGGGTCAGAAATCGAGGTCTGGTCCTGGTATTATGAGGGGTTTTGAAGGTGGTCAGATGCCCCTTTATCGCCGAATTCCCAAATTGCGTGGTATTGCTGGAGGAATGCGTGCTGGCTTGCCGAAGTATGTTCCTATTAACTTGAGAGACATAGAGGTTGCTGGATTTAAGGAAGGTGAAGAAGTATCGCTAGAGTCCTTGAAGGCAAAGGGTATAATCAATCCATCAGGGAGAGAAAGAAGGTTGCCATTGAAGATTCTTGGTGAAGGAGAATTAAGCACGAAGCTGCAAATAAAGGCACGTGCTTTCTCAGGATCAGCAAAAGAAAAGCTCGAGGCTGCAGGCTGTTCTGTCACAGTACTACCTGGAAGAAAGAAGTACATCAAAGAATCAGTAAGGAAGAACCTTGCTCGTGCTGATGAATACTTTGCAAAGAAACGAGCTGCGTCTGCCAGCGAAGCTGAGTCTGCTTAA

Protein sequence

MASLLSLSSTPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKKYIKESVRKNLARADEYFAKKRAASASEAESA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo08715	Spo08715	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo08715.1	Spo08715.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08715.1.exon.1	Spo08715.1.exon.1	exon
Spo08715.1.exon.2	Spo08715.1.exon.2	exon
Spo08715.1.exon.3	Spo08715.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08715.1.utr5p.1	Spo08715.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08715.1.CDS.1	Spo08715.1.CDS.1	CDS
Spo08715.1.CDS.2	Spo08715.1.CDS.2	CDS
Spo08715.1.CDS.3	Spo08715.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo08715.1.utr3p.1	Spo08715.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo08715.1 vs. NCBI nr
Match: gi|902163368|gb|KNA06817.1| (hypothetical protein SOVF_177460 [Spinacia oleracea])

HSP 1 Score: 506.9 bits (1304), Expect = 2.200e-140
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVV 60
           MASLLSLSSTPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVV
Sbjct: 1   MASLLSLSSTPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVV 60

Query: 61  ASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSR 120
           ASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSR
Sbjct: 61  ASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSR 120

Query: 121 SGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLES 180
           SGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLES
Sbjct: 121 SGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLES 180

Query: 181 LKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKK 240
           LKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKK
Sbjct: 181 LKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKK 240

Query: 241 YIKESVRKNLARADEYFAKKRAASASEAESA 272
           YIKESVRKNLARADEYFAKKRAASASEAESA
Sbjct: 241 YIKESVRKNLARADEYFAKKRAASASEAESA 271

[Close]

BLAST of Spo08715.1 vs. NCBI nr
Match: gi|731340689|ref|XP_010681535.1| (PREDICTED: 50S ribosomal protein L15, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 422.9 bits (1086), Expect = 4.100e-115
Identity = 234/274 (85.40%), Postives = 246/274 (89.78%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANS---NNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRL 60
           MASLLSLSS PPSTA S   N   SS FKGNINN R  PFN  PLKL+LR+I+K E+  L
Sbjct: 1   MASLLSLSSAPPSTACSSLPNPSTSSNFKGNINNLRRKPFNLTPLKLNLRSIIK-ENRPL 60

Query: 61  VVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120
           V+VAS   S + PS GSG ETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ
Sbjct: 61  VIVAS---STLGPSNGSGQETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120

Query: 121 KSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVS 180
           KSRSGPG+M+GFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVP+NLRDIEVAGFKEGEEVS
Sbjct: 121 KSRSGPGVMKGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPVNLRDIEVAGFKEGEEVS 180

Query: 181 LESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPG 240
           LESLKAKGIINPSGRERRLPLKIL EGE+STKLQIKARAFS SAKEKLEAAGCSVTVLPG
Sbjct: 181 LESLKAKGIINPSGRERRLPLKILAEGEISTKLQIKARAFSESAKEKLEAAGCSVTVLPG 240

Query: 241 RKKYIKESVRKNLARADEYFAKKRAASASEAESA 272
           RKKYIKESVRKNLARADEYFAKKRAA+ +E ESA
Sbjct: 241 RKKYIKESVRKNLARADEYFAKKRAAATNETESA 270

[Close]

BLAST of Spo08715.1 vs. NCBI nr
Match: gi|702420847|ref|XP_010066718.1| (PREDICTED: 50S ribosomal protein L15, chloroplastic [Eucalyptus grandis])

HSP 1 Score: 355.1 bits (910), Expect = 1.100e-94
Identity = 194/270 (71.85%), Postives = 222/270 (82.22%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPST-ANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVV 60
           MASLLSLSS P +  A  +N+PSS+FKG   + R  P  F P KL      +++   LVV
Sbjct: 1   MASLLSLSSAPLTRLAVVSNHPSSSFKGGSGSLRARPCLFPPAKLIQLKSRQRQKPTLVV 60

Query: 61  VASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKS 120
              ASSS       S S  RFRLDNLGPQPGSRKK KRKGRGH+AGQGGSCGFGMRGQKS
Sbjct: 61  SGKASSSPAVEQPSSSSPARFRLDNLGPQPGSRKKAKRKGRGHSAGQGGSCGFGMRGQKS 120

Query: 121 RSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLE 180
           RSGPG+MRGFEGGQMPLYRRIPKLRGIAGGM AGLPKYVP+NL+DIE AGF+EG+EVSLE
Sbjct: 121 RSGPGVMRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGDEVSLE 180

Query: 181 SLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRK 240
           +LK+K +INPSGRER+LPLKILG+GELS KL +KARAFS +AKEKLEAAGCS+TVLPGRK
Sbjct: 181 TLKSKRLINPSGRERKLPLKILGDGELSVKLTVKARAFSAAAKEKLEAAGCSLTVLPGRK 240

Query: 241 KYIKESVRKNLARADEYFAKKRAASASEAE 270
           K++K SV KNLARA+EYFA+KRAASA+ +E
Sbjct: 241 KWVKPSVAKNLARAEEYFARKRAASAAASE 270

[Close]

BLAST of Spo08715.1 vs. NCBI nr
Match: gi|728837010|gb|KHG16453.1| (50S ribosomal L15, chloroplastic -like protein [Gossypium arboreum])

HSP 1 Score: 352.1 bits (902), Expect = 8.900e-94
Identity = 192/274 (70.07%), Postives = 227/274 (82.85%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANSNNYPS--STFKGNINNFRINPFNFAPLKLHLRNIVKKESTR-L 60
           MA++LSLS  PP T      PS  STFKGN+ N + NPF+   ++   + +  ++ TR L
Sbjct: 1   MATMLSLSPNPPITT----LPSLRSTFKGNLRNLKPNPFHIIRIRTKQQGVEARKGTRSL 60

Query: 61  VVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120
           VVV  A+++ VS +    S  RFRLDNLGPQPGSRKKGKRKGRG +AGQGGSCGFGMRGQ
Sbjct: 61  VVVNQAATTQVSVT---ASNMRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120

Query: 121 KSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVS 180
           KSRSGPG+ +GFEGGQMPLYRRIPKLRGIAGGM AGLPKY+P+NL+DIE AGF+EG+EVS
Sbjct: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYIPVNLKDIETAGFQEGDEVS 180

Query: 181 LESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPG 240
           LE+LK KG+INPSGRER+LPLKILG+GEL  KL +KARAFS SAKEKLEAAGCS+TVLPG
Sbjct: 181 LETLKGKGLINPSGRERKLPLKILGDGELKVKLNLKARAFSASAKEKLEAAGCSLTVLPG 240

Query: 241 RKKYIKESVRKNLARADEYFAKKRAASASEAESA 272
           RKK++K SV KNLARA+EYFAKKRAAS+S++ SA
Sbjct: 241 RKKWVKPSVAKNLARAEEYFAKKRAASSSDSTSA 267

[Close]

BLAST of Spo08715.1 vs. NCBI nr
Match: gi|823159356|ref|XP_012479508.1| (PREDICTED: 50S ribosomal protein L15, chloroplastic [Gossypium raimondii])

HSP 1 Score: 351.7 bits (901), Expect = 1.200e-93
Identity = 192/274 (70.07%), Postives = 227/274 (82.85%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANSNNYPS--STFKGNINNFRINPFNFAPLKLHLRNIVKKESTR-L 60
           MA++LSLS  PP T      PS  STFKGN+ N + NPF+   ++   + +  ++ TR L
Sbjct: 1   MAAMLSLSPNPPITT----LPSLRSTFKGNLRNLKPNPFHIIRIRTKQQGVEAQKGTRSL 60

Query: 61  VVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120
           VVV  A+++ VS +    S  RFRLDNLGPQPGSRKKGKRKGRG +AGQGGSCGFGMRGQ
Sbjct: 61  VVVNQAATTQVSVT---ASNVRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120

Query: 121 KSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVS 180
           KSRSGPG+ +GFEGGQMPLYRRIPKLRGIAGGM AGLPKY+P+NL+DIE AGF+EG+EVS
Sbjct: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYIPVNLKDIETAGFQEGDEVS 180

Query: 181 LESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPG 240
           LE+LK KG+INPSGRER+LPLKILG+GEL  KL +KARAFS SAKEKLEAAGCS+TVLPG
Sbjct: 181 LETLKEKGLINPSGRERKLPLKILGDGELKVKLNLKARAFSASAKEKLEAAGCSLTVLPG 240

Query: 241 RKKYIKESVRKNLARADEYFAKKRAASASEAESA 272
           RKK++K SV KNLARA+EYFAKKRAAS+S++ SA
Sbjct: 241 RKKWVKPSVAKNLARAEEYFAKKRAASSSDSTSA 267

[Close]

BLAST of Spo08715.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHT0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_177460 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.500e-140
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVV 60
           MASLLSLSSTPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVV
Sbjct: 1   MASLLSLSSTPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVV 60

Query: 61  ASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSR 120
           ASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSR
Sbjct: 61  ASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSR 120

Query: 121 SGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLES 180
           SGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLES
Sbjct: 121 SGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLES 180

Query: 181 LKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKK 240
           LKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKK
Sbjct: 181 LKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKK 240

Query: 241 YIKESVRKNLARADEYFAKKRAASASEAESA 272
           YIKESVRKNLARADEYFAKKRAASASEAESA
Sbjct: 241 YIKESVRKNLARADEYFAKKRAASASEAESA 271

[Close]

BLAST of Spo08715.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C427_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g141790 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.900e-115
Identity = 234/274 (85.40%), Postives = 246/274 (89.78%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANS---NNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRL 60
           MASLLSLSS PPSTA S   N   SS FKGNINN R  PFN  PLKL+LR+I+K E+  L
Sbjct: 1   MASLLSLSSAPPSTACSSLPNPSTSSNFKGNINNLRRKPFNLTPLKLNLRSIIK-ENRPL 60

Query: 61  VVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120
           V+VAS   S + PS GSG ETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ
Sbjct: 61  VIVAS---STLGPSNGSGQETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120

Query: 121 KSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVS 180
           KSRSGPG+M+GFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVP+NLRDIEVAGFKEGEEVS
Sbjct: 121 KSRSGPGVMKGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPVNLRDIEVAGFKEGEEVS 180

Query: 181 LESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPG 240
           LESLKAKGIINPSGRERRLPLKIL EGE+STKLQIKARAFS SAKEKLEAAGCSVTVLPG
Sbjct: 181 LESLKAKGIINPSGRERRLPLKILAEGEISTKLQIKARAFSESAKEKLEAAGCSVTVLPG 240

Query: 241 RKKYIKESVRKNLARADEYFAKKRAASASEAESA 272
           RKKYIKESVRKNLARADEYFAKKRAA+ +E ESA
Sbjct: 241 RKKYIKESVRKNLARADEYFAKKRAAATNETESA 270

[Close]

BLAST of Spo08715.1 vs. UniProtKB/TrEMBL
Match: A0A059BFQ8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02317 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 7.400e-95
Identity = 194/270 (71.85%), Postives = 222/270 (82.22%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPST-ANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVV 60
           MASLLSLSS P +  A  +N+PSS+FKG   + R  P  F P KL      +++   LVV
Sbjct: 1   MASLLSLSSAPLTRLAVVSNHPSSSFKGGSGSLRARPCLFPPAKLIQLKSRQRQKPTLVV 60

Query: 61  VASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKS 120
              ASSS       S S  RFRLDNLGPQPGSRKK KRKGRGH+AGQGGSCGFGMRGQKS
Sbjct: 61  SGKASSSPAVEQPSSSSPARFRLDNLGPQPGSRKKAKRKGRGHSAGQGGSCGFGMRGQKS 120

Query: 121 RSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLE 180
           RSGPG+MRGFEGGQMPLYRRIPKLRGIAGGM AGLPKYVP+NL+DIE AGF+EG+EVSLE
Sbjct: 121 RSGPGVMRGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFQEGDEVSLE 180

Query: 181 SLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRK 240
           +LK+K +INPSGRER+LPLKILG+GELS KL +KARAFS +AKEKLEAAGCS+TVLPGRK
Sbjct: 181 TLKSKRLINPSGRERKLPLKILGDGELSVKLTVKARAFSAAAKEKLEAAGCSLTVLPGRK 240

Query: 241 KYIKESVRKNLARADEYFAKKRAASASEAE 270
           K++K SV KNLARA+EYFA+KRAASA+ +E
Sbjct: 241 KWVKPSVAKNLARAEEYFARKRAASAAASE 270

[Close]

BLAST of Spo08715.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NPI5_GOSAR (50S ribosomal L15, chloroplastic-like protein OS=Gossypium arboreum GN=F383_20608 PE=3 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 6.200e-94
Identity = 192/274 (70.07%), Postives = 227/274 (82.85%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANSNNYPS--STFKGNINNFRINPFNFAPLKLHLRNIVKKESTR-L 60
           MA++LSLS  PP T      PS  STFKGN+ N + NPF+   ++   + +  ++ TR L
Sbjct: 1   MATMLSLSPNPPITT----LPSLRSTFKGNLRNLKPNPFHIIRIRTKQQGVEARKGTRSL 60

Query: 61  VVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120
           VVV  A+++ VS +    S  RFRLDNLGPQPGSRKKGKRKGRG +AGQGGSCGFGMRGQ
Sbjct: 61  VVVNQAATTQVSVT---ASNMRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120

Query: 121 KSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVS 180
           KSRSGPG+ +GFEGGQMPLYRRIPKLRGIAGGM AGLPKY+P+NL+DIE AGF+EG+EVS
Sbjct: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYIPVNLKDIETAGFQEGDEVS 180

Query: 181 LESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPG 240
           LE+LK KG+INPSGRER+LPLKILG+GEL  KL +KARAFS SAKEKLEAAGCS+TVLPG
Sbjct: 181 LETLKGKGLINPSGRERKLPLKILGDGELKVKLNLKARAFSASAKEKLEAAGCSLTVLPG 240

Query: 241 RKKYIKESVRKNLARADEYFAKKRAASASEAESA 272
           RKK++K SV KNLARA+EYFAKKRAAS+S++ SA
Sbjct: 241 RKKWVKPSVAKNLARAEEYFAKKRAASSSDSTSA 267

[Close]

BLAST of Spo08715.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PVL0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G191400 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 8.100e-94
Identity = 192/274 (70.07%), Postives = 227/274 (82.85%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANSNNYPS--STFKGNINNFRINPFNFAPLKLHLRNIVKKESTR-L 60
           MA++LSLS  PP T      PS  STFKGN+ N + NPF+   ++   + +  ++ TR L
Sbjct: 1   MAAMLSLSPNPPITT----LPSLRSTFKGNLRNLKPNPFHIIRIRTKQQGVEAQKGTRSL 60

Query: 61  VVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQ 120
           VVV  A+++ VS +    S  RFRLDNLGPQPGSRKKGKRKGRG +AGQGGSCGFGMRGQ
Sbjct: 61  VVVNQAATTQVSVT---ASNVRFRLDNLGPQPGSRKKGKRKGRGISAGQGGSCGFGMRGQ 120

Query: 121 KSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVS 180
           KSRSGPG+ +GFEGGQMPLYRRIPKLRGIAGGM AGLPKY+P+NL+DIE AGF+EG+EVS
Sbjct: 121 KSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYIPVNLKDIETAGFQEGDEVS 180

Query: 181 LESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPG 240
           LE+LK KG+INPSGRER+LPLKILG+GEL  KL +KARAFS SAKEKLEAAGCS+TVLPG
Sbjct: 181 LETLKEKGLINPSGRERKLPLKILGDGELKVKLNLKARAFSASAKEKLEAAGCSLTVLPG 240

Query: 241 RKKYIKESVRKNLARADEYFAKKRAASASEAESA 272
           RKK++K SV KNLARA+EYFAKKRAAS+S++ SA
Sbjct: 241 RKKWVKPSVAKNLARAEEYFAKKRAASSSDSTSA 267

[Close]

BLAST of Spo08715.1 vs. ExPASy Swiss-Prot
Match: RK15_ARATH (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2)

HSP 1 Score: 315.8 bits (808), Expect = 4.400e-85
Identity = 178/274 (64.96%), Postives = 217/274 (79.20%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANSN--NYPSSTFKGNINNFRINPFNFAPLKLH--LRNIVKKESTR 60
           MA+ LS+SS P ++ +    +  S++FKGN++    NP     LKL+  L+   +++  R
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  LVVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRG 120
            +VV S +++  S  +   +  RFRLDNLGPQPGSRKK KRKGRG +AGQG SCGFGMRG
Sbjct: 61  PLVVVSQTAATSSAVV---APERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRG 120

Query: 121 QKSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEV 180
           QKSRSGPGIMRGFEGGQ  LYRR+PKLRGIAGGMR+GLPKY+P+N++DIE AGF+EG+EV
Sbjct: 121 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEV 180

Query: 181 SLESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLP 240
           SLE+LK KG+INPSGRER+LPLKILG GELS KL  KARAFS  AKEKLEA+GC++TVLP
Sbjct: 181 SLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLP 240

Query: 241 GRKKYIKESVRKNLARADEYFAKKRAASASEAES 271
           GRKK++K SV KN ARADEYFAKKRAA+A  A S
Sbjct: 241 GRKKWVKPSVAKNQARADEYFAKKRAAAAEAATS 271

[Close]

BLAST of Spo08715.1 vs. ExPASy Swiss-Prot
Match: RK15_PEA (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 5.100e-81
Identity = 179/268 (66.79%), Postives = 203/268 (75.75%), Query Frame = 1


		  
Query: 2   ASLLSLSSTPPSTANSNNYPSSTFKGNINNFRINPFNFAPLKLHLRNIVKKESTRLVVVA 61
           ASL+ +SS P          +S FKGN+      P     LK      +++   R+ VV 
Sbjct: 4   ASLIPVSSLPSL--------ASPFKGNVKTLVAKPCLCPCLK------IQRTKLRVSVVN 63

Query: 62  SASSS-NVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSR 121
            A+S+ NV     SG   RFRLDNLGPQPGSRK+ KRKGRG AAGQG SCGFGMRGQKSR
Sbjct: 64  KAASAYNVK---SSGENVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSR 123

Query: 122 SGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLES 181
           SGPGIMRGFEGGQMPLYRR+PKLRGIAGGM AGLPKYV +NL DIE AGF++GEEVSLE+
Sbjct: 124 SGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLET 183

Query: 182 LKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKK 241
           LKAK +INPSGRER+LPLKIL +GELS KL IKA AFS SAKEKLE AGCS+ VLPGRKK
Sbjct: 184 LKAKRVINPSGRERKLPLKILADGELSKKLTIKAGAFSTSAKEKLEYAGCSLIVLPGRKK 243

Query: 242 YIKESVRKNLARADEYFAKKRAA-SASE 268
           ++K SV KNLARA+EYFAKKR   +ASE
Sbjct: 244 WVKPSVAKNLARAEEYFAKKRGGETASE 254

[Close]

BLAST of Spo08715.1 vs. ExPASy Swiss-Prot
Match: RL15_SYNP6 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplO PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.600e-32
Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 1


		  
Query: 81  RLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRI 140
           +LDNL PQPG++K+ +R GRG AAGQG SCGFGMRGQKSRSG     GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 141 PKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLESLKAKGIINPSGRERRLPLKI 200
           PKL+            Y  +N+    +AG   G EV+LESL A GI+  +      PLKI
Sbjct: 62  PKLKHFP---LINRKFYTVVNVG--ALAGLAAGTEVTLESLMAVGIVTQNDG----PLKI 121

Query: 201 LGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVL 236
           LG+GELS  L + A AF+ +A++K+EAAG S+ ++
Sbjct: 122 LGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of Spo08715.1 vs. ExPASy Swiss-Prot
Match: RL15_SYNE7 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) GN=rplO PE=3 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 2.600e-32
Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 1


		  
Query: 81  RLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRI 140
           +LDNL PQPG++K+ +R GRG AAGQG SCGFGMRGQKSRSG     GFEGGQMPLYRR+
Sbjct: 2   KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRV 61

Query: 141 PKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLESLKAKGIINPSGRERRLPLKI 200
           PKL+            Y  +N+    +AG   G EV+LESL A GI+  +      PLKI
Sbjct: 62  PKLKHFP---LINRKFYTVVNVG--ALAGLAAGTEVTLESLMAVGIVTQNDG----PLKI 121

Query: 201 LGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVL 236
           LG+GELS  L + A AF+ +A++K+EAAG S+ ++
Sbjct: 122 LGDGELSVSLSVSAAAFTATAQQKIEAAGGSIALV 147

[Close]

BLAST of Spo08715.1 vs. ExPASy Swiss-Prot
Match: RL15_NOSS1 (50S ribosomal protein L15 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=rplO PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.600e-29
Identity = 81/155 (52.26%), Postives = 102/155 (65.81%), Query Frame = 1


		  
Query: 81  RLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRI 140
           RL+++ PQ GS+K+ +R GRG +AGQG S G GMRGQKSRSG G   GFEGGQ PLYRRI
Sbjct: 2   RLNDVKPQKGSKKRRRRVGRGISAGQGASAGLGMRGQKSRSGSGTRPGFEGGQQPLYRRI 61

Query: 141 PKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEVSLESLKAKGIINPSGRERRLPLKI 200
           PKL+G     R     Y  IN+   ++A      EV+LESL+A GI+  +    + PLKI
Sbjct: 62  PKLKGFPVVNR---KIYTTINVE--KLADLPANTEVTLESLRAAGILTAA----KGPLKI 121

Query: 201 LGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVL 236
           LG G+L   L +KA AF+G A+ K+EAAG S  VL
Sbjct: 122 LGNGDLGVALNVKAAAFTGQARSKIEAAGGSCEVL 147

[Close]

BLAST of Spo08715.1 vs. TAIR (Arabidopsis)
Match: AT3G25920.1 (ribosomal protein L15)

HSP 1 Score: 315.8 bits (808), Expect = 2.500e-86
Identity = 178/274 (64.96%), Postives = 217/274 (79.20%), Query Frame = 1


		  
Query: 1   MASLLSLSSTPPSTANSN--NYPSSTFKGNINNFRINPFNFAPLKLH--LRNIVKKESTR 60
           MA+ LS+SS P ++ +    +  S++FKGN++    NP     LKL+  L+   +++  R
Sbjct: 1   MATPLSISSNPLTSRHCYRLHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFAR 60

Query: 61  LVVVASASSSNVSPSIGSGSETRFRLDNLGPQPGSRKKGKRKGRGHAAGQGGSCGFGMRG 120
            +VV S +++  S  +   +  RFRLDNLGPQPGSRKK KRKGRG +AGQG SCGFGMRG
Sbjct: 61  PLVVVSQTAATSSAVV---APERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRG 120

Query: 121 QKSRSGPGIMRGFEGGQMPLYRRIPKLRGIAGGMRAGLPKYVPINLRDIEVAGFKEGEEV 180
           QKSRSGPGIMRGFEGGQ  LYRR+PKLRGIAGGMR+GLPKY+P+N++DIE AGF+EG+EV
Sbjct: 121 QKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEV 180

Query: 181 SLESLKAKGIINPSGRERRLPLKILGEGELSTKLQIKARAFSGSAKEKLEAAGCSVTVLP 240
           SLE+LK KG+INPSGRER+LPLKILG GELS KL  KARAFS  AKEKLEA+GC++TVLP
Sbjct: 181 SLETLKQKGLINPSGRERKLPLKILGTGELSMKLTFKARAFSTQAKEKLEASGCTLTVLP 240

Query: 241 GRKKYIKESVRKNLARADEYFAKKRAASASEAES 271
           GRKK++K SV KN ARADEYFAKKRAA+A  A S
Sbjct: 241 GRKKWVKPSVAKNQARADEYFAKKRAAAAEAATS 271

[Close]

BLAST of Spo08715.1 vs. TAIR (Arabidopsis)
Match: AT5G64670.1 (Ribosomal protein L18e/L15 superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.600e-8
Identity = 61/176 (34.66%), Postives = 90/176 (51.14%), Query Frame = 1


		  
Query: 92  RKKGKRKGRGHAAGQGGSCGFGMRGQKSRSGPGIMR-GFEGGQMPLYRRIPKLRGIAGGM 151
           RK   RKGRG  +G+G + G G +GQK+R   G M+ GFEGGQ PL RR+PK RG     
Sbjct: 75  RKLKTRKGRGIGSGKGKTAGRGHKGQKAR---GTMKFGFEGGQTPLRRRLPK-RGFKNKF 134

Query: 152 RAGLPKYVPINL----RDIEVAGFKEGEEVSLESLKAKGIINPSGRERRLPLKILGEG-- 211
           +     + P+ L    + I        E +++++LK  G I   G++    ++++G G  
Sbjct: 135 KL---HFQPVGLGKIAKLINAGKIDSHELITMKTLKDVGAI---GKQIEDGVRLMGRGAD 194

Query: 212 ELSTKLQIKARAFSGSAKEKLEAAGCSVTVLPGRKKYIKESVRKNLARADEYFAKK 261
           ++   L  +    +  AKE +EAAG SV     R  Y K  +R  L    E+F KK
Sbjct: 195 DIKWPLHFEVSRVTVRAKEVVEAAGGSVR----RVYYNKLGLRALL--KPEWFEKK 234

The following BLAST results are available for this feature:

BLAST of Spo08715.1 vs. NCBI nr
BLAST of Spo08715.1 vs. UniProtKB/TrEMBL
BLAST of Spo08715.1 vs. ExPASy Swiss-Prot
BLAST of Spo08715.1 vs. TAIR (Arabidopsis)

BLAST of Spo08715.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902163368\|gb\|KNA06817.1\|	2.2e-140	100.	hypothetical protein SOVF_1774...	[more]
gi\|731340689\|ref\|XP_010681535.1\|	4.1e-115	85.4	PREDICTED: 50S ribosomal prote...	[more]
gi\|702420847\|ref\|XP_010066718.1\|	1.1e-94	71.8	PREDICTED: 50S ribosomal prote...	[more]
gi\|728837010\|gb\|KHG16453.1\|	8.9e-94	70.0	50S ribosomal L15, chloroplast...	[more]
gi\|823159356\|ref\|XP_012479508.1\|	1.2e-93	70.0	PREDICTED: 50S ribosomal prote...	[more]

BLAST of Spo08715.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QHT0_SPIOL	1.5e-140	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C427_BETVU	2.9e-115	85.4	Uncharacterized protein OS=Bet...	[more]
A0A059BFQ8_EUCGR	7.4e-95	71.8	Uncharacterized protein OS=Euc...	[more]
A0A0B0NPI5_GOSAR	6.2e-94	70.0	50S ribosomal L15, chloroplast...	[more]
A0A0D2PVL0_GOSRA	8.1e-94	70.0	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo08715.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
RK15_ARATH	4.4e-85	64.9	50S ribosomal protein L15, chl...	[more]
RK15_PEA	5.1e-81	66.7	50S ribosomal protein L15, chl...	[more]
RL15_SYNP6	2.6e-32	52.9	50S ribosomal protein L15 OS=S...	[more]
RL15_SYNE7	2.6e-32	52.9	50S ribosomal protein L15 OS=S...	[more]
RL15_NOSS1	1.6e-29	52.2	50S ribosomal protein L15 OS=N...	[more]

BLAST of Spo08715.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT3G25920.1	2.5e-86	64.9	ribosomal protein L15	[more]
AT5G64670.1	3.6e-8	34.6	Ribosomal protein L18e/L15 sup...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001196	Ribosomal protein L15, conserved site	PROSITE	PS00475	RIBOSOMAL_L15	coord: 199..229 scor
IPR005749	Ribosomal protein L15, bacterial-type	PANTHER	PTHR12934	50S RIBOSOMAL PROTEIN L15	coord: 1..265 score: 6.5E
IPR005749	Ribosomal protein L15, bacterial-type	TIGRFAMs	TIGR01071	TIGR01071	coord: 82..232 score: 4.7
IPR021131	Ribosomal protein L18e/L15P	PFAM	PF00828	Ribosomal_L27A	coord: 106..233 score: 3.3
IPR021131	Ribosomal protein L18e/L15P	unknown	SSF52080	Ribosomal proteins L15p and L18e	coord: 83..234 score: 4.45
None	No IPR available	GENE3D	3.100.10.10		coord: 111..238 score: 2.8
None	No IPR available	PANTHER	PTHR12934:SF11	50S RIBOSOMAL PROTEIN L15, CHLOROPLASTIC	coord: 1..265 score: 6.5E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005622	intracellular
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0000311	plastid large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome