Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGCATTAAAAAAAAAAAGTTCATCTCCAACTTGTAATCAAAAGAAGAAGTTCATCTTCGACTCCAAAAAGAAAACACTTCTCCTTCTCCAACTAACCACCCTCCTCCGCCACATTTCCACTCTTACCACCGTCAATTCCTCCACCCTCGCCACCTAGCTCTACGATGACTGGCTATGATTAACAATTCCCACAAAAGAAAAAAGATGTTAAGAAATAATAATAATAATAGCAAAGGAGAAAAAGAAGAGTTAGAGAAACTAACCGGACAACAACAAGTGTACTCTTTCAAGAAAGATGCATCCTCAAAATTAATTAGGTTGGCAATATGTTTAACGGTATTCATTGCTGGTGTTGCTACTGGTTTAGTTTCAAGCTCACAATGGTCAACGGTTAGCTTAGAGAATTATAGCAAGATCTACGCCACCGTCCGCGGCCGCGATCCAATAATTAATAAGTGCAGCTCTACTTCAAGGTGTGAGACGGTTGATTGTTTGAGCTTAGATAATATAATTCAGCCATATAACTTGAGTCATGATTTATCTGATAAAGAGTTGGTATGGAGAGCTTCAATGGTACCTAAAGTTGTAGGGTACCCTTTTAAAAGGGTACCTAAAGTAGCCTTCATGTTCTTGACAAGGGGTCCTTTGCCTCTCTTGCCTTTGTGGGAGAGATTTTTTGCTGGTCATGAAGCTTTTTTTTCGATTTATGTTCATACACAAGCTGGATTTGTGTTTGATGTTTCTCCGGATTCAGTGTTCTTCGCCCGCCAAGTTCCTAGTAAGGTACGTCTTTTAGCTGCAAATAATTAGAAATTAGAAATTAGAAATTAGAAATTAGAAATTATTGCGATTGGATTTGGAGTTGTTTGTTAGGAGTTTAGATGATGTGATTTTGTGTTTTGTGATCAACTTTGATTGCTCTGACATCCGAGATTGGGAAAATCCTTTTGTAGATGTTATAGCATTTCTGGGCAGACCAATTAATTGTCTTAATTTATGCAAGTATAAAGAGATGATTTCATGCATATTATATGAGATCCTATTCCTGGCTCTAGTTGTAATCCAAGCGAGATCACATTGCATAATAAAGGATTCCCAGCTTATGAGGGAGGGTGTTGAGATGTTGAATGTTGAATGTTGAAACAAGGGGCGTGTTATTGTGTCTGCAGATTCATTTCATAATTTATGATTTTCGAATTCCTGGTTAAATACCATATTAAGGTTGTATTTTAGTTGAATCTATATAGGATTAGTTTGGCGCATCTATATTACTTGCTAAAACTGAAACAAATATAGTTGACAACCAAACATTAATCTAGAGGTAATATATAGATTATTCTCAGTTAGAGATGGGCAATGGTGTTATCAAGAGTTTATTGATTTTTGGTTCGCCTTTTGAATTTTGATCTACTGCCTACCTGAACCTCATACGTAGTCCTTATTTCTTGCGAGCCACAAAATAACTAATTGCTTATCTCTAAGCCCAGATCTTGAGCACTGATGTCTTCTTTCAGCCACAATTCTTTAAGTCTTAAGTATTACCATAGTGTGAGCAATTGAAAACAATTTGAGGTGCTCTAGTAATTGGATGTTACCTGTTCCCATAGTGTGAGCAATTGAGCATGCATTTCTGATAATATGGTCTAGTAATCATGAACTCCATCTATCTGGAATTAGTCGCATTATAACCTCTGTTAATTTAAAGTTAAGCTGACCAGCTAATATAGTACGGAGTACTCCGTAATATGTATGATATAATGGTAATGAAATGTTAAGGTGCATTTGGTATGTTCAAATTGTCCTTTTTGGAACTTTACTTGGCTGTATAGATGAAGTTGAATCTGTAGTTTTTCAGTAAAAAGATGGTAATATTATTTCATATAAATTTACAGGAAGTTTCTTGGGGTGATGTATCACTAGCAGATGCAGAGAAGAGGCTTTTAGCCAATGCACTCCTGGACTTCACAAATGAGCGTTTTGTGCTCCTTTCTGAGAGTTGTATCCCAGTTTACGATTTCCAAACAGTTTATAAATATCTGACTGAATCTACACACAGTTATGTGGAGTCATATGATGATAAAACCCGTTTTGGACGTGGAAGATATGATCGACATATGAGACCCAATATAATGGTAGATGAATGGAGAAAGGGGGCTCAATGGTTCGAGATAACACGAGCTTTGGGTGTGGAAATAATATCAGATAACAAATACTACCATCTGTTTAGAAAATATTGTCATCCACCTTGCTTTCCTGATGAACACTACATTCCTACATACCTCAACAAATTCCATGCATCTGGTAATTCTAATCGCACCTTGACTTGGGTGGATTGGTCTTTGGGAGGACCTCATCCAACAACCTTTGTAAGAGAGAATATAACACAAGCTTTCATAGAGAATATCAGGAATTACAGGAATAAGTGTTGGTATAATTCTAAGAGTATAAATGTATGTTACCTTTTCGCTCGCAAGTTTGCTCCAAGTGCATTGGACCCCTTGCTGGATTTAAGCTCTAAGGTAATGGGATTTTGACAACTTTTATTTGCTCTCACCAACTTCTTCTTTTCTTCTTAAATCAATAAACGATACTATTATTTACTCATCCTCTTAGGTAATTACATTCTTTTTTCATTTCATAAATACGTCTTACTCTGTATCATTACACATTTGTTGATTTTTTGTCCTAGTTTCTTGTTTTGGAATCAAGATTTGTTGGAAAGGAACCCAAATTATATCTGCTAAATGCTTCTTTTATCCTCCTATACTATTGGATATGTATGTTCAAAAGTTTTCGGTTATGCGTTAGCAAGGCTGTCAAGGTCGGGATCCTACCTTAGAACGAAGAAGCGGGATATGATCGGATCGGTAGAATTAGATTATCAGATCGTAAGATCCTACTACATAGTAAAAACAATGTTTGTATTATGAAAATGCAATGTAAAATCATGTATTTAAGTAATCTTAATACTTAAAGATCATGTTTGCTCACATAAGATTAATAATTGGGTAGATTCAAGTGCAATTAATAAAACATGCGCAAGGTTGTTGAATT CCGCATTAAAAAAAAAAAGTTCATCTCCAACTTGTAATCAAAAGAAGAAGTTCATCTTCGACTCCAAAAAGAAAACACTTCTCCTTCTCCAACTAACCACCCTCCTCCGCCACATTTCCACTCTTACCACCGTCAATTCCTCCACCCTCGCCACCTAGCTCTACGATGACTGGCTATGATTAACAATTCCCACAAAAGAAAAAAGATGTTAAGAAATAATAATAATAATAGCAAAGGAGAAAAAGAAGAGTTAGAGAAACTAACCGGACAACAACAAGTGTACTCTTTCAAGAAAGATGCATCCTCAAAATTAATTAGGTTGGCAATATGTTTAACGGTATTCATTGCTGGTGTTGCTACTGGTTTAGTTTCAAGCTCACAATGGTCAACGGTTAGCTTAGAGAATTATAGCAAGATCTACGCCACCGTCCGCGGCCGCGATCCAATAATTAATAAGTGCAGCTCTACTTCAAGGTGTGAGACGGTTGATTGTTTGAGCTTAGATAATATAATTCAGCCATATAACTTGAGTCATGATTTATCTGATAAAGAGTTGGTATGGAGAGCTTCAATGGTACCTAAAGTTGTAGGGTACCCTTTTAAAAGGGTACCTAAAGTAGCCTTCATGTTCTTGACAAGGGGTCCTTTGCCTCTCTTGCCTTTGTGGGAGAGATTTTTTGCTGGTCATGAAGCTTTTTTTTCGATTTATGTTCATACACAAGCTGGATTTGTGTTTGATGTTTCTCCGGATTCAGTGTTCTTCGCCCGCCAAGTTCCTAGTAAGGAAGTTTCTTGGGGTGATGTATCACTAGCAGATGCAGAGAAGAGGCTTTTAGCCAATGCACTCCTGGACTTCACAAATGAGCGTTTTGTGCTCCTTTCTGAGAGTTGTATCCCAGTTTACGATTTCCAAACAGTTTATAAATATCTGACTGAATCTACACACAGTTATGTGGAGTCATATGATGATAAAACCCGTTTTGGACGTGGAAGATATGATCGACATATGAGACCCAATATAATGGTAGATGAATGGAGAAAGGGGGCTCAATGGTTCGAGATAACACGAGCTTTGGGTGTGGAAATAATATCAGATAACAAATACTACCATCTGTTTAGAAAATATTGTCATCCACCTTGCTTTCCTGATGAACACTACATTCCTACATACCTCAACAAATTCCATGCATCTGGTAATTCTAATCGCACCTTGACTTGGGTGGATTGGTCTTTGGGAGGACCTCATCCAACAACCTTTGTAAGAGAGAATATAACACAAGCTTTCATAGAGAATATCAGGAATTACAGGAATAAGTGTTGGTATAATTCTAAGAGTATAAATGTATGTTACCTTTTCGCTCGCAAGTTTGCTCCAAGTGCATTGGACCCCTTGCTGGATTTAAGCTCTAAGTTTCTTGTTTTGGAATCAAGATTTGTTGGAAAGGAACCCAAATTATATCTGCTAAATGCTTCTTTTATCCTCCTATACTATTGGATATGTATGTTCAAAAGTTTTCGGTTATGCGTTAGCAAGGCTGTCAAGGTCGGGATCCTACCTTAGAACGAAGAAGCGGGATATGATCGGATCGGTAGAATTAGATTATCAGATCGTAAGATCCTACTACATAGTAAAAACAATGTTTGTATTATGAAAATGCAATGTAAAATCATGTATTTAAGTAATCTTAATACTTAAAGATCATGTTTGCTCACATAAGATTAATAATTGGGTAGATTCAAGTGCAATTAATAAAACATGCGCAAGGTTGTTGAATT ATGATTAACAATTCCCACAAAAGAAAAAAGATGTTAAGAAATAATAATAATAATAGCAAAGGAGAAAAAGAAGAGTTAGAGAAACTAACCGGACAACAACAAGTGTACTCTTTCAAGAAAGATGCATCCTCAAAATTAATTAGGTTGGCAATATGTTTAACGGTATTCATTGCTGGTGTTGCTACTGGTTTAGTTTCAAGCTCACAATGGTCAACGGTTAGCTTAGAGAATTATAGCAAGATCTACGCCACCGTCCGCGGCCGCGATCCAATAATTAATAAGTGCAGCTCTACTTCAAGGTGTGAGACGGTTGATTGTTTGAGCTTAGATAATATAATTCAGCCATATAACTTGAGTCATGATTTATCTGATAAAGAGTTGGTATGGAGAGCTTCAATGGTACCTAAAGTTGTAGGGTACCCTTTTAAAAGGGTACCTAAAGTAGCCTTCATGTTCTTGACAAGGGGTCCTTTGCCTCTCTTGCCTTTGTGGGAGAGATTTTTTGCTGGTCATGAAGCTTTTTTTTCGATTTATGTTCATACACAAGCTGGATTTGTGTTTGATGTTTCTCCGGATTCAGTGTTCTTCGCCCGCCAAGTTCCTAGTAAGGAAGTTTCTTGGGGTGATGTATCACTAGCAGATGCAGAGAAGAGGCTTTTAGCCAATGCACTCCTGGACTTCACAAATGAGCGTTTTGTGCTCCTTTCTGAGAGTTGTATCCCAGTTTACGATTTCCAAACAGTTTATAAATATCTGACTGAATCTACACACAGTTATGTGGAGTCATATGATGATAAAACCCGTTTTGGACGTGGAAGATATGATCGACATATGAGACCCAATATAATGGTAGATGAATGGAGAAAGGGGGCTCAATGGTTCGAGATAACACGAGCTTTGGGTGTGGAAATAATATCAGATAACAAATACTACCATCTGTTTAGAAAATATTGTCATCCACCTTGCTTTCCTGATGAACACTACATTCCTACATACCTCAACAAATTCCATGCATCTGGTAATTCTAATCGCACCTTGACTTGGGTGGATTGGTCTTTGGGAGGACCTCATCCAACAACCTTTGTAAGAGAGAATATAACACAAGCTTTCATAGAGAATATCAGGAATTACAGGAATAAGTGTTGGTATAATTCTAAGAGTATAAATGTATGTTACCTTTTCGCTCGCAAGTTTGCTCCAAGTGCATTGGACCCCTTGCTGGATTTAAGCTCTAAGTTTCTTGTTTTGGAATCAAGATTTGTTGGAAAGGAACCCAAATTATATCTGCTAAATGCTTCTTTTATCCTCCTATACTATTGGATATGTATGTTCAAAAGTTTTCGGTTATGCGTTAGCAAGGCTGTCAAGGTCGGGATCCTACCTTAG MINNSHKRKKMLRNNNNNSKGEKEELEKLTGQQQVYSFKKDASSKLIRLAICLTVFIAGVATGLVSSSQWSTVSLENYSKIYATVRGRDPIINKCSSTSRCETVDCLSLDNIIQPYNLSHDLSDKELVWRASMVPKVVGYPFKRVPKVAFMFLTRGPLPLLPLWERFFAGHEAFFSIYVHTQAGFVFDVSPDSVFFARQVPSKEVSWGDVSLADAEKRLLANALLDFTNERFVLLSESCIPVYDFQTVYKYLTESTHSYVESYDDKTRFGRGRYDRHMRPNIMVDEWRKGAQWFEITRALGVEIISDNKYYHLFRKYCHPPCFPDEHYIPTYLNKFHASGNSNRTLTWVDWSLGGPHPTTFVRENITQAFIENIRNYRNKCWYNSKSINVCYLFARKFAPSALDPLLDLSSKFLVLESRFVGKEPKLYLLNASFILLYYWICMFKSFRLCVSKAVKVGILP Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo08991.1 vs. NCBI nr
Match: gi|902178712|gb|KNA09206.1| (hypothetical protein SOVF_155590 [Spinacia oleracea]) HSP 1 Score: 828.2 bits (2138), Expect = 7.200e-237 Identity = 402/404 (99.50%), Postives = 403/404 (99.75%), Query Frame = 1
BLAST of Spo08991.1 vs. NCBI nr
Match: gi|731341758|ref|XP_010682059.1| (PREDICTED: uncharacterized protein LOC104896962 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 619.8 bits (1597), Expect = 3.900e-174 Identity = 307/422 (72.75%), Postives = 353/422 (83.65%), Query Frame = 1
BLAST of Spo08991.1 vs. NCBI nr
Match: gi|870856264|gb|KMT07936.1| (hypothetical protein BVRB_6g145390 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 610.5 bits (1573), Expect = 2.400e-171 Identity = 297/406 (73.15%), Postives = 343/406 (84.48%), Query Frame = 1
BLAST of Spo08991.1 vs. NCBI nr
Match: gi|731341756|ref|XP_010682058.1| (PREDICTED: uncharacterized protein LOC104896961 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 540.8 bits (1392), Expect = 2.300e-150 Identity = 256/420 (60.95%), Postives = 319/420 (75.95%), Query Frame = 1
BLAST of Spo08991.1 vs. NCBI nr
Match: gi|902131815|gb|KNA04297.1| (hypothetical protein SOVF_200990 [Spinacia oleracea]) HSP 1 Score: 537.7 bits (1384), Expect = 2.000e-149 Identity = 259/413 (62.71%), Postives = 319/413 (77.24%), Query Frame = 1
BLAST of Spo08991.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QRS1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_155590 PE=4 SV=1) HSP 1 Score: 828.2 bits (2138), Expect = 5.000e-237 Identity = 402/404 (99.50%), Postives = 403/404 (99.75%), Query Frame = 1
BLAST of Spo08991.1 vs. UniProtKB/TrEMBL
Match: A0A0J8EXI6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g145390 PE=4 SV=1) HSP 1 Score: 610.5 bits (1573), Expect = 1.700e-171 Identity = 297/406 (73.15%), Postives = 343/406 (84.48%), Query Frame = 1
BLAST of Spo08991.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAI6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_200990 PE=4 SV=1) HSP 1 Score: 537.7 bits (1384), Expect = 1.400e-149 Identity = 259/413 (62.71%), Postives = 319/413 (77.24%), Query Frame = 1
BLAST of Spo08991.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2E6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g145380 PE=4 SV=1) HSP 1 Score: 532.7 bits (1371), Expect = 4.400e-148 Identity = 247/390 (63.33%), Postives = 306/390 (78.46%), Query Frame = 1
BLAST of Spo08991.1 vs. UniProtKB/TrEMBL
Match: A0A0A0L2Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G110720 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 4.100e-130 Identity = 231/374 (61.76%), Postives = 280/374 (74.87%), Query Frame = 1
BLAST of Spo08991.1 vs. TAIR (Arabidopsis)
Match: AT1G10280.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 433.3 bits (1113), Expect = 1.800e-121 Identity = 214/420 (50.95%), Postives = 279/420 (66.43%), Query Frame = 1
BLAST of Spo08991.1 vs. TAIR (Arabidopsis)
Match: AT3G21310.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 371.3 bits (952), Expect = 8.500e-103 Identity = 171/309 (55.34%), Postives = 229/309 (74.11%), Query Frame = 1
BLAST of Spo08991.1 vs. TAIR (Arabidopsis)
Match: AT1G68390.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 368.2 bits (944), Expect = 7.200e-102 Identity = 175/302 (57.95%), Postives = 214/302 (70.86%), Query Frame = 1
BLAST of Spo08991.1 vs. TAIR (Arabidopsis)
Match: AT1G51770.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 360.5 bits (924), Expect = 1.500e-99 Identity = 167/326 (51.23%), Postives = 228/326 (69.94%), Query Frame = 1
BLAST of Spo08991.1 vs. TAIR (Arabidopsis)
Match: AT5G11730.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein) HSP 1 Score: 359.4 bits (921), Expect = 3.400e-99 Identity = 182/367 (49.59%), Postives = 235/367 (64.03%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08991.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08991.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08991.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo08991.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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