Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATCAACAGAAAAGAAAAAGAAATCTAAAACCCTAAAACATTTGTCTCTTTCTCACTCTTCCCCAATTTCCCCCTTCACTCACTTCCTTCCATACCAGGATAATAATTCCTATAAAAACCCCACATTTTTGTTTTTCTCACTCCAAAATTTTCTTCAAAAGAAAATGGCAACTCTTAGATTTACAAATGCCAATGAATTAATTTACACCCCTCCAATTTCAACCCAATTTCACAGCAAAAAAAGTTTCAATTATAATTCTAAAACATTCTTCTTTCCCAGAACTTCTAAAAAAAGAAATGGGCAAAAGTATGCAGGGTTTTCTACTTCTTGTTCTTTTACTCCGATGGAAACTGCTAAGATTAAGGTTGTGGGTGTTGGTGGGGGTGGCAACAATGCAATTAATCGCATGATTGGTAGCGGTTTGCAGGTATAATTTCTCTCTTTTTATTGGGTTTTTGTCGCTTTTTTTCTTCCAGGTTTTTTTTAATATTTATTTGACCAAATTTTCTGTGTTTGATTTTGGATATATTTGAATGAATATTTGGGTACAATATCAATTCCATTGTCAAATTGGACATTTGGGTATTTAGAAATAAAAATTTGGTTTAATTTGGATCAATTCTGTTGTCGGATTAATGGATTCTTATGCTAGCCTCAGTCAGTTGAATTTTGTCATTTACATCTGATGTGAATTGTGAATGATCCTTTTAATTCTACCATTGAATTGAGCATTTGGGTATTTGTTAGAAGCTTATATCTTGTTCTGTTTGGTAAAGCGACCGTTTCAGAGCTTCAATTTGTCACATTTTCCGCCTAGAATGTGACGCCCTTTGCTTATTGCAATTTTTTGGGTGGGATTACATTGTTGCATTTTGCTCTTCGATGTCTAATTTGTAAAATGGTTATTAGTTTCTAAAATGAATGTCTTTCTTGTGGTAACAATTTAATTTTGAAGTATATCATTGAAGGTCAGTTTTCTGCAATTAAACCATTGTTTTGGAGATTCAGGCTGCTGAGAGATGGATGAAATGAAAGAATTTATAATCCCAATCTATACAGTAGCTGAGTAGCATCAGTTTGCATTTATTAGAGTTGAATTGGTATTTCCTTTGTTATGATTTGTCAAAGAGATATCCACAAAATTTGTTCTTTGGACAATTTCGTAGTGAAAGGCATTAACTTAATACTCTTACTGGTTCTTTGTATCTTCTCAAGTTAGTTGATGTATGATTTTTGATCTTTGCTTTACCCTTGGCCACTCTTGATTTTATAAATTGTCATACAAGTTCTTCCTCACTGTGTGCTTTGCTGTTGCTTGATTATATATCTTTTAGGATTTGAGTGGTTTTGTATAGAATTTCATTAAAAATAACACTTGGACATACCCGTTTTTTAGTGTTACATTTATGACTCTTTTGAATTTGTTCAGGAAGGAAGCTCATTCTTATGTGCGTAATTATAGAATGATGTGACATCTTGCACCCAAATTTGATAAATGTATCATGTATGCCTTTGTTGTCAGGGTGTTGATTTTTATGCCGTAAACACAGATGCTCAGGCGTTATTGCAATCAGCTGCTGAGCACCCAATTCAAATAGGAGAGCTTCTGACACGTGGATTAGGTCTGGCGCATGTTGTGTCCTAAATGAGTGTCTATGGATACTCATATTATGACCTCCTTTTTGCCCATTTATATCATTTATCTCTATGCAGGTACTGGTGGGAATCCGTCACTTGGAGAGCAGGCTGCTCAAGAATCAAAAGAAGCTATTGCAACAGCACTTGCAGGATCAGACCTCGTGTTTGTAACAGCAGGAATGGGTGGGGGCACTGGATCAGGTGCTGCTCCTGTCATCGCTCAAATATCCAAGGATGCGGGTTACCTCACTGTGGGCGTGGTCACTTACCCTTTCAGTTTCGAGGGCCGCAAAAGGTCATTGCAGGCAGGTGTCCCTTATCTTCCTTAGCATATCTTGATCACAATGGTTTTTGTATCCAATTGAGGAAGCTTGTTCATATAGTCATTCTTGTTTTCCAGTCATAAGTATAATTTGTCTTTGTCCTATGTGAATGTGCCTATTTAAGAGAAATATTTACGATCTCCTATTGAGTTTTTTTAAGTGTGAAATTCAGGTTTTTGGCATTACTTCATCTTTTTGTTTCTGATCTTATCAGGCACTGGAAGCTATAGAGAAGCTGCAGAATAATGTGGATACCCTCATTGTGATACCAAATGACCGTCTCTTGGACATTGCTGATGATCAAACTCCTCTTCAGGATGCTTTTCAGCTGGCTGATGATGTTCTTCGCCAGGGCGTTCAAGGAATTTCAGACATAATTACGGTATGTCAATATAAAATTTGTTTTTTCACTTTGTTGCACTGATATATGGGTCTCTGTTGAGACTAAATGTGAAACTTAGAGTTTGAACGTTGAAGATGCCATAATGTTGCAACTATCAACAAGTTTAATCAATTCTAAGCATGTTATCACGCATAAAAGGCATTTCATCTTTACAAAAACATTAAACTGTAATTATTGTGGCGATATTGGTGGCGTTGTAGAACTTGGAAATTCGAGAAGCATTGTGCAAACTAGCATAGTGAGGATGGTTTTAGGGAAATTCCTGTTGCATCATACCATAAATCAACTATAAGATCTTATCTTATCTTGTAGAATTGAAGTTGTTGTTTCCTGTTTCCTGTTTCGTAGATTCCGGGACTTGTAAACGTGGACTTTGCTGATGTGAAGGCAATCATGAAGGATTCAGGAACGGCAATGCTTGGAGTTGGTGTTTCCTCTAGTAAAAACCGTGCAGAAGAAGCAGCTGAACAAGCAACTTTGGCACCTCTAATTGGCTCATCCATACAATCAGCTACTGGTGTTGTATACAATATAACAGGAGGAAAGGATATAACATTACAGGAAGTTAACAGAGTATCGCAGGTACATTATGGAATGTATTATCAGGATTCAGGAATATAATATCCCTACTTTTATTTGTACATTTTTCTAACAATATAAATTCACGTGAAATTGTGCAGGTGGTTACAAGTTTAGCAGATCCATCTGCTAACATAATATTCGGGGCTGTTGTCGATGATCGCTACAATGGAGAGATTCATGTGACTATAATTGCAACAGGCTTCTCACAGTCATTTCAAAAGACACTACTAACAGATCCCAAAGCTTCAAGGCTTTTCGATAAAGTAACCCAGGAAAGCAAAGGAGGATCAACTGGTCTTTCCAATTCATCTCCGAATTCTCAGAACTCCGTGCCACCACGACCTCCAAGAAAGCTGTTCTTTTAGAGTCTCTAACAAACAACCCCTTCTTTCTTCCCATTGCCATTGTTTGCTCTCTTGGACATGGATTTGTAGTCATATAAAAAAATCAATGTTACATCTTCGTTGTTCCTACCTCGTATGTCTCTTCGTGTTGAGTTTTTTTTCATCTGGTAGGATTGCTTAATTTTTTGATCTTGCAAATTTGCATGCTGCAAACTGTAATATGAAAATACAAATGCAATTCAGGTTCAAGTCCATGTTTTTTTAATAACAATATTCAAGTCCATGTGAACTTGAAAGTAGGATGTTAATTGTTAAATGATAAGTAGACGAAATTTTTTTAGCAGCACTCAAATTTGAGTCAACTAAATTGAACATGTGGGTTTTCTTATTGAAAATTCTATTTCCAGTGCAAC AAAATCAACAGAAAAGAAAAAGAAATCTAAAACCCTAAAACATTTGTCTCTTTCTCACTCTTCCCCAATTTCCCCCTTCACTCACTTCCTTCCATACCAGGATAATAATTCCTATAAAAACCCCACATTTTTGTTTTTCTCACTCCAAAATTTTCTTCAAAAGAAAATGGCAACTCTTAGATTTACAAATGCCAATGAATTAATTTACACCCCTCCAATTTCAACCCAATTTCACAGCAAAAAAAGTTTCAATTATAATTCTAAAACATTCTTCTTTCCCAGAACTTCTAAAAAAAGAAATGGGCAAAAGTATGCAGGGTTTTCTACTTCTTGTTCTTTTACTCCGATGGAAACTGCTAAGATTAAGGTTGTGGGTGTTGGTGGGGGTGGCAACAATGCAATTAATCGCATGATTGGTAGCGGTTTGCAGGGTGTTGATTTTTATGCCGTAAACACAGATGCTCAGGCGTTATTGCAATCAGCTGCTGAGCACCCAATTCAAATAGGAGAGCTTCTGACACGTGGATTAGGTACTGGTGGGAATCCGTCACTTGGAGAGCAGGCTGCTCAAGAATCAAAAGAAGCTATTGCAACAGCACTTGCAGGATCAGACCTCGTGTTTGTAACAGCAGGAATGGGTGGGGGCACTGGATCAGGTGCTGCTCCTGTCATCGCTCAAATATCCAAGGATGCGGGTTACCTCACTGTGGGCGTGGTCACTTACCCTTTCAGTTTCGAGGGCCGCAAAAGGTCATTGCAGGCACTGGAAGCTATAGAGAAGCTGCAGAATAATGTGGATACCCTCATTGTGATACCAAATGACCGTCTCTTGGACATTGCTGATGATCAAACTCCTCTTCAGGATGCTTTTCAGCTGGCTGATGATGTTCTTCGCCAGGGCGTTCAAGGAATTTCAGACATAATTACGATTCCGGGACTTGTAAACGTGGACTTTGCTGATGTGAAGGCAATCATGAAGGATTCAGGAACGGCAATGCTTGGAGTTGGTGTTTCCTCTAGTAAAAACCGTGCAGAAGAAGCAGCTGAACAAGCAACTTTGGCACCTCTAATTGGCTCATCCATACAATCAGCTACTGGTGTTGTATACAATATAACAGGAGGAAAGGATATAACATTACAGGAAGTTAACAGAGTATCGCAGGTGGTTACAAGTTTAGCAGATCCATCTGCTAACATAATATTCGGGGCTGTTGTCGATGATCGCTACAATGGAGAGATTCATGTGACTATAATTGCAACAGGCTTCTCACAGTCATTTCAAAAGACACTACTAACAGATCCCAAAGCTTCAAGGCTTTTCGATAAAGTAACCCAGGAAAGCAAAGGAGGATCAACTGGTCTTTCCAATTCATCTCCGAATTCTCAGAACTCCGTGCCACCACGACCTCCAAGAAAGCTGTTCTTTTAGAGTCTCTAACAAACAACCCCTTCTTTCTTCCCATTGCCATTGTTTGCTCTCTTGGACATGGATTTGTAGTCATATAAAAAAATCAATGTTACATCTTCGTTGTTCCTACCTCGTATGTCTCTTCGTGTTGAGTTTTTTTTCATCTGGTAGGATTGCTTAATTTTTTGATCTTGCAAATTTGCATGCTGCAAACTGTAATATGAAAATACAAATGCAATTCAGGTTCAAGTCCATGTTTTTTTAATAACAATATTCAAGTCCATGTGAACTTGAAAGTAGGATGTTAATTGTTAAATGATAAGTAGACGAAATTTTTTTAGCAGCACTCAAATTTGAGTCAACTAAATTGAACATGTGGGTTTTCTTATTGAAAATTCTATTTCCAGTGCAAC ATGGCAACTCTTAGATTTACAAATGCCAATGAATTAATTTACACCCCTCCAATTTCAACCCAATTTCACAGCAAAAAAAGTTTCAATTATAATTCTAAAACATTCTTCTTTCCCAGAACTTCTAAAAAAAGAAATGGGCAAAAGTATGCAGGGTTTTCTACTTCTTGTTCTTTTACTCCGATGGAAACTGCTAAGATTAAGGTTGTGGGTGTTGGTGGGGGTGGCAACAATGCAATTAATCGCATGATTGGTAGCGGTTTGCAGGGTGTTGATTTTTATGCCGTAAACACAGATGCTCAGGCGTTATTGCAATCAGCTGCTGAGCACCCAATTCAAATAGGAGAGCTTCTGACACGTGGATTAGGTACTGGTGGGAATCCGTCACTTGGAGAGCAGGCTGCTCAAGAATCAAAAGAAGCTATTGCAACAGCACTTGCAGGATCAGACCTCGTGTTTGTAACAGCAGGAATGGGTGGGGGCACTGGATCAGGTGCTGCTCCTGTCATCGCTCAAATATCCAAGGATGCGGGTTACCTCACTGTGGGCGTGGTCACTTACCCTTTCAGTTTCGAGGGCCGCAAAAGGTCATTGCAGGCACTGGAAGCTATAGAGAAGCTGCAGAATAATGTGGATACCCTCATTGTGATACCAAATGACCGTCTCTTGGACATTGCTGATGATCAAACTCCTCTTCAGGATGCTTTTCAGCTGGCTGATGATGTTCTTCGCCAGGGCGTTCAAGGAATTTCAGACATAATTACGATTCCGGGACTTGTAAACGTGGACTTTGCTGATGTGAAGGCAATCATGAAGGATTCAGGAACGGCAATGCTTGGAGTTGGTGTTTCCTCTAGTAAAAACCGTGCAGAAGAAGCAGCTGAACAAGCAACTTTGGCACCTCTAATTGGCTCATCCATACAATCAGCTACTGGTGTTGTATACAATATAACAGGAGGAAAGGATATAACATTACAGGAAGTTAACAGAGTATCGCAGGTGGTTACAAGTTTAGCAGATCCATCTGCTAACATAATATTCGGGGCTGTTGTCGATGATCGCTACAATGGAGAGATTCATGTGACTATAATTGCAACAGGCTTCTCACAGTCATTTCAAAAGACACTACTAACAGATCCCAAAGCTTCAAGGCTTTTCGATAAAGTAACCCAGGAAAGCAAAGGAGGATCAACTGGTCTTTCCAATTCATCTCCGAATTCTCAGAACTCCGTGCCACCACGACCTCCAAGAAAGCTGTTCTTTTAG MATLRFTNANELIYTPPISTQFHSKKSFNYNSKTFFFPRTSKKRNGQKYAGFSTSCSFTPMETAKIKVVGVGGGGNNAINRMIGSGLQGVDFYAVNTDAQALLQSAAEHPIQIGELLTRGLGTGGNPSLGEQAAQESKEAIATALAGSDLVFVTAGMGGGTGSGAAPVIAQISKDAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQNNVDTLIVIPNDRLLDIADDQTPLQDAFQLADDVLRQGVQGISDIITIPGLVNVDFADVKAIMKDSGTAMLGVGVSSSKNRAEEAAEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYNGEIHVTIIATGFSQSFQKTLLTDPKASRLFDKVTQESKGGSTGLSNSSPNSQNSVPPRPPRKLFF Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Spo08998.1 vs. NCBI nr
Match: gi|731329867|ref|XP_010675824.1| (PREDICTED: cell division protein FtsZ homolog 1, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 717.2 bits (1850), Expect = 1.600e-203 Identity = 383/422 (90.76%), Postives = 398/422 (94.31%), Query Frame = 1
BLAST of Spo08998.1 vs. NCBI nr
Match: gi|902216804|gb|KNA17530.1| (hypothetical protein SOVF_078930 [Spinacia oleracea]) HSP 1 Score: 679.1 bits (1751), Expect = 4.900e-192 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 1
BLAST of Spo08998.1 vs. NCBI nr
Match: gi|870861569|gb|KMT12841.1| (hypothetical protein BVRB_4g089330 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 637.5 bits (1643), Expect = 1.600e-179 Identity = 342/361 (94.74%), Postives = 349/361 (96.68%), Query Frame = 1
BLAST of Spo08998.1 vs. NCBI nr
Match: gi|720045126|ref|XP_010270112.1| (PREDICTED: cell division protein FtsZ homolog 1, chloroplastic-like [Nelumbo nucifera]) HSP 1 Score: 622.5 bits (1604), Expect = 5.500e-175 Identity = 341/424 (80.42%), Postives = 370/424 (87.26%), Query Frame = 1
BLAST of Spo08998.1 vs. NCBI nr
Match: gi|567920940|ref|XP_006452476.1| (hypothetical protein CICLE_v10008445mg [Citrus clementina]) HSP 1 Score: 620.5 bits (1599), Expect = 2.100e-174 Identity = 334/420 (79.52%), Postives = 367/420 (87.38%), Query Frame = 1
BLAST of Spo08998.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RDI2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_078930 PE=3 SV=1) HSP 1 Score: 679.1 bits (1751), Expect = 3.400e-192 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 1
BLAST of Spo08998.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FAE3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g089330 PE=3 SV=1) HSP 1 Score: 637.5 bits (1643), Expect = 1.100e-179 Identity = 342/361 (94.74%), Postives = 349/361 (96.68%), Query Frame = 1
BLAST of Spo08998.1 vs. UniProtKB/TrEMBL
Match: A0A067F449_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014946mg PE=3 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 1.500e-174 Identity = 334/420 (79.52%), Postives = 367/420 (87.38%), Query Frame = 1
BLAST of Spo08998.1 vs. UniProtKB/TrEMBL
Match: V4UT41_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008445mg PE=3 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 1.500e-174 Identity = 334/420 (79.52%), Postives = 367/420 (87.38%), Query Frame = 1
BLAST of Spo08998.1 vs. UniProtKB/TrEMBL
Match: H9AY28_MANES (FtsZ1 protein OS=Manihot esculenta GN=ftsZ1 PE=2 SV=1) HSP 1 Score: 620.2 bits (1598), Expect = 1.900e-174 Identity = 337/423 (79.67%), Postives = 366/423 (86.52%), Query Frame = 1
BLAST of Spo08998.1 vs. ExPASy Swiss-Prot
Match: FTSZ1_ARATH (Cell division protein FtsZ homolog 1, chloroplastic OS=Arabidopsis thaliana GN=FTSZ1 PE=1 SV=2) HSP 1 Score: 597.0 bits (1538), Expect = 1.500e-169 Identity = 318/369 (86.18%), Postives = 340/369 (92.14%), Query Frame = 1
BLAST of Spo08998.1 vs. ExPASy Swiss-Prot
Match: FTSZ_NOSS1 (Cell division protein FtsZ OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=ftsZ PE=3 SV=2) HSP 1 Score: 399.4 bits (1025), Expect = 4.700e-110 Identity = 204/357 (57.14%), Postives = 273/357 (76.47%), Query Frame = 1
BLAST of Spo08998.1 vs. ExPASy Swiss-Prot
Match: FTSZ_SYNY3 (Cell division protein FtsZ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ftsZ PE=1 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 8.900e-109 Identity = 194/314 (61.78%), Postives = 258/314 (82.17%), Query Frame = 1
BLAST of Spo08998.1 vs. ExPASy Swiss-Prot
Match: FTZ22_ARATH (Cell division protein FtsZ homolog 2-2, chloroplastic OS=Arabidopsis thaliana GN=FTSZ2-2 PE=1 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 4.000e-101 Identity = 190/308 (61.69%), Postives = 245/308 (79.55%), Query Frame = 1
BLAST of Spo08998.1 vs. ExPASy Swiss-Prot
Match: FTZ21_ARATH (Cell division protein FtsZ homolog 2-1, chloroplastic OS=Arabidopsis thaliana GN=FTSZ2-1 PE=1 SV=2) HSP 1 Score: 367.9 bits (943), Expect = 1.500e-100 Identity = 187/308 (60.71%), Postives = 245/308 (79.55%), Query Frame = 1
BLAST of Spo08998.1 vs. TAIR (Arabidopsis)
Match: AT5G55280.1 (homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1) HSP 1 Score: 597.0 bits (1538), Expect = 8.700e-171 Identity = 318/369 (86.18%), Postives = 340/369 (92.14%), Query Frame = 1
BLAST of Spo08998.1 vs. TAIR (Arabidopsis)
Match: AT3G52750.1 (Tubulin/FtsZ family protein) HSP 1 Score: 369.8 bits (948), Expect = 2.300e-102 Identity = 190/308 (61.69%), Postives = 245/308 (79.55%), Query Frame = 1
BLAST of Spo08998.1 vs. TAIR (Arabidopsis)
Match: AT2G36250.1 (Tubulin/FtsZ family protein) HSP 1 Score: 367.9 bits (943), Expect = 8.600e-102 Identity = 187/308 (60.71%), Postives = 245/308 (79.55%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo08998.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo08998.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo08998.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo08998.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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