Spo09041.1 (mRNA) | SpinachBase

Overview


Name	Spo09041.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	ABC transporter family protein
Location	SpoScf_03532 : 10019 .. 19805 (+)
Sequence length	1686

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAACCTCATAATCCACCAATACCTTTTTCATACAGTAATTCATGTTGGTGCGAAACCCAACTACCCCAAATATGAACATCTCTTCCATAAATAACCAAAACGACAATTACTAGATCTCATTCGTTTTTCTCAATTTCAAGAGCAGCAAATCAATTCAAACAAAAATGGTGCAAGAAAATGGAAATGTGTCGGGCAATTCAAGCAGTAGCATCAAAGTGCAAGCGATGCAATTCGCGTACCCAGGCCAACCTCCAATTTTCGTCGATTTTAGCCTCCAAATTGCTCCGGGTTCTCGTTGTCTTCTTGTGGGTGCTAATGGATCTGGTAAATTGATCGCTATTCTCTTTCTAGTTTTCTCAATTTGTTGTTTCTTTTTGTGTTTTGATTTATGTATGCTAATACTATATGTTTCTGTTTTTTGGGTGAAATGTTATTCGTTTTTGTATTGTGTTAAATTGTTTGAACAATGATTCTTTTGGTGAAAACTCGGATTTATGCGGGGAGTGTACTAGAAGAATATTCAATTTCATGTCTGATGACAAGCTTCGACATGTCTCTGCCAGCGGTTTCTTCAAAATTTAACTGTACTTGGTTCTTTGGTAGACCTTTTTAGAGGGATACCTTTTGTTGCTTACCCTTCCATGTTCCATTAGCTTGGTAACCTCCAATCTCCTTCTCCATGGATTTGACCCAATAGGGATCAAGACAAGCTTCAGAGTAGCTTGTCCCATCTAGGACCAAGATCTAGGGTACTTATTGAATGAAGTTGAGCAAAAACAGAATGAATACAATTATTGCACATTTGCACTTCCCTACTTTGATACCATATAAGAATTTGTGATTTGATTGAGTTAGCTCATATCTAGTTCCGAAATAATACAACTTAGATTGTGTTCTTATACAATATGTATATATATTTATATATTATTACAATAACCTTCAACTCCCTCCTTCCCTTTTTATTTGTTCCATTTGACTTTTCACGGTCTCCGTACGCGACTTAAAACGTAAATATCTTCAATTCTACGTGTGCAAAATTTTTAAAAAGTAGATATTCTAAGCATATACATTGAACCGAATATTTTAAAAAGTTGATATTCTAAACATATACATTGAACCGAATCTAACAATACCCCACATGACTATATTATTTCCTATTGGTTAATGAGAGTTAATGGTGAAACTTTTAAAAGTTGATCCAAAAATATGCAATGGGGAAAACATTAAGAGGCGGAGGGAATATCTACTTAACAAACTATGCTGACTCGGACAACACATAGGCATCATGTTGCTGCTGCAGTGCTGCTGTTTTTGTTTGAACTCTTAAGTTGTTAATTTTTATGGCCTATTACTTGTAATCCGAGTTAGACCGCATTAACACCGGGCCTTTTAACTTTACTGAAAATTTACATTGTCTTCCTTACTATAGCATCAGAGAGTTCATTTTATCTGTTGTAAATATGGTTGATGCTTTTTAGGTAAGACCACCTTGTTGAAGATTCTGGCTGGAAAGCATATGGTTGGTGGAAGAGATGTTGTGCAGGTGTTGAATTCTTCAGCTTTCCATGACACACATCTTGTTTGTGGTGGTGATTTAGCATATTTAGGAGGATCTTGGAGTAAGACTATTGGCTGTGCTGTGAGTCTCTCTCTCTTAAATCTTCAGACACACACAAACACCCCCAACACACACAATCACACATATTATGTAATTAGTTTCTTTCATTCACATGTTTTGCTCTCTTTGGTCACTTCCCCAATTCTTTTTTGCTTGTGTATTTGTTCATCTTTGCACATGCTTGGGTAACATAGATAACCGTGCTATAAGGTAATTGATTAAATTACAGTCTTAATATTTGACATGGAATGGTCTTGTGGTTAAGTTGGTTTTTTCTTTTCTTTATGACATATACGTCTGTATTTGTAGTTTGTAATAATTTAAAAGAGAATGAGTAAAAGTGGTGTGCTAATGATAACACATTACTGTGAACGTTCATAATTGATATTAAGATATTCATTTAAAGTTACTTAGTCTCCTTTATCTCTCTCTTGATGTGTTACTTTTGCCTATACAAGGCATTATGGTCAGTCAACTTTTAGTTGTTACAAATGGGGCAATTTTCAATTATTATTTTTAATTGTGAGATGGACTAGGCACTTGAATCATATTCTATGGGACGCATCAATACTATTCATGAAATTTAGCATGCAAGTGTTCCTTTCTTAGTTGTGGTTGAGTAGGGTGTTGAGGAGGTGGGATGGACTATGGAGTATAGTCGAGATGAAAAAAATTGGAGAATGTTTTAAGGTGAATGAACTAGCTCGTGAGAAGGAAATGCATATTAATTGGGGAGTGTTCTAAAGAGACTGTATTCAGCAAAAGTTTTATTGACACGTTTGTTGATATGGATTTAGCTCCTGAAAACTGAAAAGTATATTATCATGAAAAAATATAGTTTTGACACCTCAGTAACTATCACAAAAGAAAAAAAAAACTTATCACACCTGAACTAATAATTAAAGTGATGAGAAGATGTTGGTTTGTATGAAGAAACACACCTCATATTCTCTCAGTTCTCTTATGATATATTAACTTGATGGCTTTGATCTCTTAATACATCATTGTTGAATTATTAGATGTTCAAGACCAATCCGTGGACTATGGACCGTGGTGCACATAGAGTATGGTGCACCAAAAGAACATATGTGCATAAGCAAAAGAACATGACACTACGGCAAAAGAACATGCGATATAATATTTCACTTTTTTGTTATAAAAATAATATATTATTTTACTATTTATTAAAAAACTAAATAAAAAAAAATACTCATGTTCTTTTCTCGTAACCAGATGTTCTTTCAATTATATACTAGTTTTCTTAAGGTGCACCATGCTCTATGTGCACCATGGTCCACCTTCTAAATTGCGGTTCAAGACTAACAAGTACTTCCTTCGTTTCATAAAAATTGGAACACTTCTAGTTTTATCACTATTCATATACTAACTTTGACAATGTATTTTACTAATTTACAAAAAGTGAATGTTATAAGTAAAATGTGGGTGGATAGATTTCATTGTATATTTTAATAGTATTAAATTTTAAGATTTAAAAAAGAAAAATAATTAGAGATATTTACGGTCAAAGTTTTGTCTTGGCAAACGTGCTAATCAAAGTGTGGCAATTTTTTTTGAAACAGAGGAAGTATTATCTATTAGGTTATGGAATCAGAACAAGTAATAGGAAAGAGTTATCATTTATTCAGGAATTATCTATTATGTGTTGGTATCTTTTTATATTATGGCTTTTCATGTAAGTACCATTTACTAGCTAATACTCCGTATTTGTGAGCCCTGATAGAGAGATCATGTTCTCAATCACTCGTGCTGTTTGTTTGAGGTGCTTCAGCTACTCAGCCTTTTATTAGAACGGCTGCATATTAGCGATACCTTTTTATTTGAGGAGCTTGTCTTTCCTTTTCCTTTTATTCTTCCTTTTCAAGCCGATTAGTATCCGCTGCTTGTTTCAATACTTGTGAAGCAAGTGAATACTATTGTATGTAGGGCCATATTATTTCTAAGATAATCAATGAATTGAACTCTTCATAAGGTAGAAGCACTTAACAGGACCAGCAGAGCCAGGTTTTAATGCTTCGGATATATACGGGGTTTATGAAACTGTACTTAATATCCTGTTATGCTGCCACAAAGCTCTTAAATCTTTCGTTTTGCCGATTCTAGTCACTCTGTGAGGCTCTTTCTCCTTTTTACTAGTTCTTTTAAATCATTTACCAACTGAACATACTGGGTGTACACATGAACCAAAGTGGGCTGCTTAATCATCTTTGTGCAATAACGTACTTTTGAGAATCTGGTATCGTAACGTGTTTCGGCGCCTTGCCAATGGTTAACAACAAATTTCTTAATGCTTTTCCTTTGTCCACTGTACGTTTTACTAGTTTTTTTAGCTATTCACTGCTTGCAGCTTGTAAGCTTTATTCTTTTTTGAAATATCAGGGTGATGTTCCTCTCCAAGGAGATATTTCAGCTGAACAGATGCTATTTGGAGGTACATATCTTTACCCTTTTTCTCAACCTTATACGCTTTAGAAACCTTCTCTTCCGTAGAAATCCCCCAACACGGGAATGCACCCCCTCCTCAGTGGTTATGTGATGAACAAAGTAGCTTGGAAAACAATGAAAACGTTATACATTCAATTCTACACTTTCTGAGAATTGCTTTCCATCATACTTTTATGGAGTTGGGTCCATACGGGACTTAGAGTTAATATTCTTCACTTATTTTAGGAATTCTGTGGTGCTATGAACTGATATATGGGTGGGGGCACTTTAGGAAATAGCTATATAAGTTAGTACCAGGGGTGGACTTATGTGGACCCCGATGGGTCCACAGGGACCCCCATTTTTTGGGGGGGAAAAATAGAAAATATAATGGTCATTTGGGTTGGAAAGAATATTCTATATTAATGGTCCCAATATTGTAGAGAGAAAGTAGGAATGAAGATAAAAGGCTAAATAAAATATGGAGTGTTGAGTATGTTGAAATAGGAATGCAATTCCCTAAAACAATGTCAGTCTTCACGAGAAAGTGAGACTGGAAAAGAAAATCCAAAAAAAGTTGTAAAGACTAAAAAATGTCATTTCCCTCTTCCTTGTAAAGACTAAAAAAGTTAAGAAGGCTACATCGCTCAGTGCTCAGACATTTGGAGATTATTTGAATCTCTCGAGCCTAAATGTGTTCGTATGATTTTCAACTACCATTAATTACTACCCAATTTCTTAAATGTGTGTAGAAAACCATAAAACAAAATTTTCTAGCGGGAGCTACTGCAAATCTGCAATATATTGATTCCTACTACGGTACTACCATGCAGTAAAGTGTGATTAAAGTGTGATTACCCCTGTGCGCTAAGTGCGGAATCTTTCTGATCATATTATACACACTAATTAGTCGAGCAATATTCCTTATTCAATGCAAGTTGATTGGGTTATCCTTAAACAACACATGCCTTTAAATTAAAACAATGCTTATTATATAATATTACAACCATGGTGTAAAAACTCGCCCGAGTTAACTCGTATCGCCCGAGTGAACAAGGTTTTGGAGGCTGGTGATACGAGATATCCCGAGTTGTAAAGGTGTTTTTAAAAACGCCGAGATCTCGGCCGGTGCAACCGATCCGAACGAATTTTGGCCGCATTAAACGTTATAAACCTCACATCTACTCGGTTTTCAGCCGAATTCCTCATGTTGTCGACAAAAAGAAAGGGAAAAAGGAAAGAAATGGAGAAACTCCATTGAAATAGAGTAGAGAACTCCATTTTCAAATCTAAAACAAGAGAGGAAAGAGATGGTAGACAAAGGTATTCATTTTAATTATGTCACGTGTACAGTTTAGGGGAGGGGAACTAGGGTAGGTAGTGAATGGGGCCGACATGGGGCTTCTTTTTCAAATTTCAAATTCCTACGCGACAACCGCGACGCGGTCCGCGACTAACGCATCATTTCCGTAACCGAGACTCCGCGACCGATCCCGCGACCGTGACCGATACCGCATTTTTTATCTATGATTACAACTATACGAGATGTGACTTATAATACTCCGTACCTCTAAAAAATGCAAAATGCCGCGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTTTTTTGTTTGCATATTAATTAGTTTTATTTTACCTTATTAATGAATTACTACTTGGGTTTTTGAATTGTGTATGACTTTAAAAATTTTGTGCAATAAAGTTACGTTCTATTTTTGGACCCCCATTTTATAATTCTTGGATTCTCCCCTGGTTAGTACAAATTGCTTGGGGAATAAGTTATGGGGTCAGTTAGGGAAGTAGTGCTATATATAGAGAGCTAGTAGAGAGAGAATGTTATGTTGAATATTATTAAGTACATTGGTTGAGCTTTTAAGAGTTCATTAGGAGAGAATCAAGCCTCTCGAATGCTTGGGTGTCTTTACATTTTGCTGCAATTTCACTTTTGTTAATCAAATCATCATCTTCTTCCTTATGATCTGTCATTTATGATGTCATAGCTATGTTAAATTCATAGCATATGGGTTTTAAATTTTTTTAAAACTGCCCTCATCTAAGGGCTTGTTTGGTTGACAAGGGAATTTAATTCCTATAGGAAGTTGTAATTCAAAGGAAATTAGTTCCCTTGTTAAATTCATGGGAATTTCTTAAAGTTGTTTGTTTGACAACATGGGAAATTGGAAATTTCCATGAACTTTGATTGACCTAGGGGGACTAGGTAATTTACTTCCCATGTTTTTGTAGGAACTCAAACGTCCCATAAATTCCAACTTCCTCCATTTTTACTATTTTAGGTCAACCAAACAACTAGTCAATCTTTAAATTCCCATGAATTTCTACTTCCCCCATTTTTAGATGTCAACCAAACAACCCCTAAATCTCGAATTTAGCGGGGTTTCATTATTTGTACGTTTAATTAAAATTTAACCAAAGGAGAAACCTTGAATCTATGCTACTCAGACAAAGCAGGTCTGTAAATGGCCCAACCTTTGCCGGGGAAATCGCTGAGAAAAGCGTAAACTAGCATACGAACAGGCATTATTCTGTTATGTGTTGAATGTTTTTAAACAAATCCTAAAGATACCTCAAAAAAATAAATATAAATTCCTAACTGTAATGGACTCACAAAAAATTTCGTGAAAACCAAACCTAACAACATTCCTATACAAATTGGAAAGAACAGCTCAAAACCATGTAAAAAGAAAAAGCTACTAGTGAAAAGCTAAGCGGCTTTATTTAAACTCAGACGAAATCTGTAGGGCAGGTGTGGAATGCATGAAATGGCCATGCATGCGACTGCTTTGCCATTGCACAAGTTTGAGCTTCTTCTTTTGTGGTTCAATCGTGCATGTTACACGAGTGGTTCATGCGAGATGCTCCTGCATTGCTCTCTTGTAACCATATAGACTTGTACCTAATGTTTTCCAAGGTATGAGCTATGACACTAAAAGAAAAAAGAATAAACGGTTGCTTCAAGTCAATGGTTTGAATTGTTTTCCAAGCACAATGATCAATGTATTCCAAGGTACCCATGTTGTAAATCCTGTTACTAAACGCTGCACCATCCATATACACATCAAACACTCCTTTTTTTTAGAAAAACTCTGACCACAAATTCCCCACATACTTGAAGGGAGGAAACACACAATATCCTATGTCTCAATGACTGCATTTATCTTCAATAAACACCAAAGCATTTTCCTTTCTTTGGTTTTGATCTTGAAATATCTTTGTTGCACCAAAATTTAACTGCGTATGGCACTCATGTTATAAGTTTTGTAGAGTAAATGGATGTCATCCAAATGCGCATCAATAGTGTAAGTGTAACTGCAAATATTATCTCTTCTGTTGCATTAAGAATAGTATCATAAAGCGTATACCTTAAATAAGCAGCACTAGTACCAGCAGCTTAGCTCTTCTGAATTCTGGACTGAGGTTATAAACCTATTTCTTTTTAATTGCAGTTGAAGGCACTGATCCTGATAGAAGAGACAAATTAATTGAATTGCTTGATATTGATTTACAATGGCGAATGCATAAGGTGTCTGATGGTCAGCGAAGGCGAGTCCAAATCTGCATGGGTCTTCTTCATCCCTTCAAGGTGTCTTGTCTCTTGTCTTATGAGTTATATCTTTATTCCACCTCACACCCCCCCNCCCCCCAACTTTTCCCTCCGTTCAAAAGTTGTTTCTGGTAAATTACTGTTCTGTTTCACATTTTAAATTTGTACTCAAGCAAGTATAAAAGTCTGCGTAACACTGGAGTAGAACAAAGCTTAGTTATGTCAGGTAAACTTTAAGCCTTCACCTTGCAGGCTTGCATACTCTGCAAGATTCTGGGGGTTTCATGATAATAACTTCTCTTTTCCTCAGTTTCTTTTGATGTTTAATAGCCATAAGTTCCCTTTATCCAATTGTGATTCTAGGAGACTGATGTATACTTTATTTCAATGTTGAGTTTTCAAGAGAAAAAACTGTTTGTCTTTGTATTAAATTCATTTTGTTACACCTAGCTGGCTAGCTCTAGGTTTTGTGGCCTATTGTATGTTTATATTCTTTTGCTTCCCTCTGTTACCTTATCTCCTACCTTCTTTTCTTTAGCTTAAATACTAATACTATAATTCCATGGTAATCTCAACGGCTTCATGTTTGATTGGAAATTTTGGTATGCTGCAGGTCCTCTTGTTGGATGAGGTTACTGTCGATCTTGATGTAGTTGCCAGGATGGATTTGCTTGAATTCTTAAAGGAAGAGTGTGATCAGGTATTGTCTTTGTCTAGCCACAAACTTTTACTGTCATTACGTCCCTGGCAAGTTACATCATCCATGATTTGCTAAATTTTAAGGTATCTTGAGACAGTTTACCAATAAATTTAGGGAGTAAAACAAGAATGACATATTTTTCTGCAAAGAAATTAGAAAAACATGCAGTACTATTATACAAGTTTATTGGAAAAACTATGCATTTCTTTTTCTGCTTTCTTCCTAGCCGATACAACACCTTTGGGTACTTGTGAAGAAGGCAACAGAAGTTAGAAAGGGAAATGTACCGGACATGATTCTGAAGTGCAAGATTGTCCATGGATAGATAATACCTAATTTCATGAACTTTTGAAATGTTGGACATTCAATCTCCCTGAATACACTGTTATAGAAAAAATGGACAAGTAATTACGTGTGTCCTAGTGTTCTTACATCGGCCTGAGCAGAATATTGATATTCAATCATTCCATGGAAACATGCAGAGAGGAGCAACAATTGTTTATGCAACCCACATCTTTGATGGTTTGGAGACCTGGGCAACTCATCTGGCCTACATTCAGGAGGGAGAGTTGAGGAAGGTAGAGAAGCTGTCAGAGCTTCATGAGTTGAAGAATTCGACCAATCTTCTTTCTGTGGTTGAGGCATGGCTACGTTCTGAGACTAAGCTCGAGAAGAAGAAACCTGTTGCCACTATTACCAATAACCAAAAGTCGTCTGGTTTTGATGCTTCACCATTTAGATCGTCCAGACATATGGCCTACTACCGGTAATCTTAACAAGACTTGCCTTCTCAACTAGAAATGTGCTCCATCTTCAAGATTGTTGTGGCACTAATCTGCAATTTTATGAATAGTACCCTATTTTCGTCAAAAAAAGAATAGTGCCTTTTTTCAGAGGGCAATGCAGTGGCTTTTTATCAGTGTAGTGAGCCTGCAATAATGTCATACTGGATCAAAGCAAATTTTCATTAGCCAAATTGAAGAAATGCGTACCAAATCTTGTGGCGTGGCAGCGATCACAAGATAGAAGAGTCTGGCGAAGCAGCAAGTTTGCTAAGCTGCAAGTTTTTCTGTCCAGGTCTGCGCAACCTAGAGTGCAAAGCTTGTATTTCCTTTCATGAGTTGTTTGTGTGCGTTGCATGAGGCAACTTATCTCGTGTTTGATTGACCAACTGTATTGATTGTGTTAGTGGTAATGACAGGTATAATACATAATAAGATTCTTTATAGATATTTGTATTTGTCAAAAGTGTAAGCACAGAATCAGTTTGGCACATTTGTAGATCAGTGTTATACTGCATAGGTACGACTATAAACATGAATTTATTGGTTTACCTCACATAATACAATCACGGCATACTGAATTTACGAACACTTGTCCCTAATATCATGTGGGAAACTGAAGGA

mRNA sequence

TGAACCTCATAATCCACCAATACCTTTTTCATACAGTAATTCATGTTGGTGCGAAACCCAACTACCCCAAATATGAACATCTCTTCCATAAATAACCAAAACGACAATTACTAGATCTCATTCGTTTTTCTCAATTTCAAGAGCAGCAAATCAATTCAAACAAAAATGGTGCAAGAAAATGGAAATGTGTCGGGCAATTCAAGCAGTAGCATCAAAGTGCAAGCGATGCAATTCGCGTACCCAGGCCAACCTCCAATTTTCGTCGATTTTAGCCTCCAAATTGCTCCGGGTTCTCGTTGTCTTCTTGTGGGTGCTAATGGATCTGGTAAGACCACCTTGTTGAAGATTCTGGCTGGAAAGCATATGGTTGGTGGAAGAGATGTTGTGCAGGTGTTGAATTCTTCAGCTTTCCATGACACACATCTTGTTTGTGGTGGTGATTTAGCATATTTAGGAGGATCTTGGAGTAAGACTATTGGCTGTGCTGGTGATGTTCCTCTCCAAGGAGATATTTCAGCTGAACAGATGCTATTTGGAGTTGAAGGCACTGATCCTGATAGAAGAGACAAATTAATTGAATTGCTTGATATTGATTTACAATGGCGAATGCATAAGGTGTCTGATGGTCAGCGAAGGCGAGTCCAAATCTGCATGGGTCTTCTTCATCCCTTCAAGGTCCTCTTGTTGGATGAGGTTACTGTCGATCTTGATGTAGTTGCCAGGATGGATTTGCTTGAATTCTTAAAGGAAGAGTGTGATCAGAGAGGAGCAACAATTGTTTATGCAACCCACATCTTTGATGGTTTGGAGACCTGGGCAACTCATCTGGCCTACATTCAGGAGGGAGAGTTGAGGAAGGTAGAGAAGCTGTCAGAGCTTCATGAGTTGAAGAATTCGACCAATCTTCTTTCTGTGGTTGAGGCATGGCTACGTTCTGAGACTAAGCTCGAGAAGAAGAAACCTGTTGCCACTATTACCAATAACCAAAAGTCGTCTGGTTTTGATGCTTCACCATTTAGATCGTCCAGACATATGGCCTACTACCGGTAATCTTAACAAGACTTGCCTTCTCAACTAGAAATGTGCTCCATCTTCAAGATTGTTGTGGCACTAATCTGCAATTTTATGAATAGTACCCTATTTTCGTCAAAAAAAGAATAGTGCCTTTTTTCAGAGGGCAATGCAGTGGCTTTTTATCAGTGTAGTGAGCCTGCAATAATGTCATACTGGATCAAAGCAAATTTTCATTAGCCAAATTGAAGAAATGCGTACCAAATCTTGTGGCGTGGCAGCGATCACAAGATAGAAGAGTCTGGCGAAGCAGCAAGTTTGCTAAGCTGCAAGTTTTTCTGTCCAGGTCTGCGCAACCTAGAGTGCAAAGCTTGTATTTCCTTTCATGAGTTGTTTGTGTGCGTTGCATGAGGCAACTTATCTCGTGTTTGATTGACCAACTGTATTGATTGTGTTAGTGGTAATGACAGGTATAATACATAATAAGATTCTTTATAGATATTTGTATTTGTCAAAAGTGTAAGCACAGAATCAGTTTGGCACATTTGTAGATCAGTGTTATACTGCATAGGTACGACTATAAACATGAATTTATTGGTTTACCTCACATAATACAATCACGGCATACTGAATTTACGAACACTTGTCCCTAATATCATGTGGGAAACTGAAGGA

Coding sequence (CDS)

ATGGTGCAAGAAAATGGAAATGTGTCGGGCAATTCAAGCAGTAGCATCAAAGTGCAAGCGATGCAATTCGCGTACCCAGGCCAACCTCCAATTTTCGTCGATTTTAGCCTCCAAATTGCTCCGGGTTCTCGTTGTCTTCTTGTGGGTGCTAATGGATCTGGTAAGACCACCTTGTTGAAGATTCTGGCTGGAAAGCATATGGTTGGTGGAAGAGATGTTGTGCAGGTGTTGAATTCTTCAGCTTTCCATGACACACATCTTGTTTGTGGTGGTGATTTAGCATATTTAGGAGGATCTTGGAGTAAGACTATTGGCTGTGCTGGTGATGTTCCTCTCCAAGGAGATATTTCAGCTGAACAGATGCTATTTGGAGTTGAAGGCACTGATCCTGATAGAAGAGACAAATTAATTGAATTGCTTGATATTGATTTACAATGGCGAATGCATAAGGTGTCTGATGGTCAGCGAAGGCGAGTCCAAATCTGCATGGGTCTTCTTCATCCCTTCAAGGTCCTCTTGTTGGATGAGGTTACTGTCGATCTTGATGTAGTTGCCAGGATGGATTTGCTTGAATTCTTAAAGGAAGAGTGTGATCAGAGAGGAGCAACAATTGTTTATGCAACCCACATCTTTGATGGTTTGGAGACCTGGGCAACTCATCTGGCCTACATTCAGGAGGGAGAGTTGAGGAAGGTAGAGAAGCTGTCAGAGCTTCATGAGTTGAAGAATTCGACCAATCTTCTTTCTGTGGTTGAGGCATGGCTACGTTCTGAGACTAAGCTCGAGAAGAAGAAACCTGTTGCCACTATTACCAATAACCAAAAGTCGTCTGGTTTTGATGCTTCACCATTTAGATCGTCCAGACATATGGCCTACTACCGGTAA

Protein sequence

MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo09041	Spo09041	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo09041.1	Spo09041.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09041.1.exon.1	Spo09041.1.exon.1	exon
Spo09041.1.exon.2	Spo09041.1.exon.2	exon
Spo09041.1.exon.3	Spo09041.1.exon.3	exon
Spo09041.1.exon.4	Spo09041.1.exon.4	exon
Spo09041.1.exon.5	Spo09041.1.exon.5	exon
Spo09041.1.exon.6	Spo09041.1.exon.6	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09041.1.utr5p.1	Spo09041.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09041.1.CDS.1	Spo09041.1.CDS.1	CDS
Spo09041.1.CDS.2	Spo09041.1.CDS.2	CDS
Spo09041.1.CDS.3	Spo09041.1.CDS.3	CDS
Spo09041.1.CDS.4	Spo09041.1.CDS.4	CDS
Spo09041.1.CDS.5	Spo09041.1.CDS.5	CDS
Spo09041.1.CDS.6	Spo09041.1.CDS.6	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo09041.1.utr3p.1	Spo09041.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo09041.1 vs. NCBI nr
Match: gi|902225582|gb|KNA20110.1| (hypothetical protein SOVF_055270 [Spinacia oleracea])

HSP 1 Score: 587.0 bits (1512), Expect = 1.800e-164
Identity = 293/294 (99.66%), Postives = 294/294 (100.00%), Query Frame = 1


		  
Query: 1   MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK 60
           MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK
Sbjct: 1   MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK 60

Query: 61  ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ 120
           ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ
Sbjct: 61  ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ 120

Query: 121 MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD 180
           MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD
Sbjct: 121 MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD 180

Query: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHE 240
           LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEK+SELHE
Sbjct: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKMSELHE 240

Query: 241 LKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           LKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR
Sbjct: 241 LKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 294

[Close]

BLAST of Spo09041.1 vs. NCBI nr
Match: gi|731319238|ref|XP_010670153.1| (PREDICTED: ABC transporter I family member 19-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 528.5 bits (1360), Expect = 7.600e-147
Identity = 265/294 (90.14%), Postives = 275/294 (93.54%), Query Frame = 1


		  
Query: 1   MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK 60
           MVQE  NV   SS+SIKVQAMQFAYPGQPPIF DFSL I+ GSRCLLVGANGSGKTTLLK
Sbjct: 1   MVQEMKNVE--SSTSIKVQAMQFAYPGQPPIFADFSLDISAGSRCLLVGANGSGKTTLLK 60

Query: 61  ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ 120
           ILAGKHMVGGRDVVQVLNSSAFHDT LVC GDLAYLGGSWSKTIG AG+VPLQGD SAEQ
Sbjct: 61  ILAGKHMVGGRDVVQVLNSSAFHDTRLVCSGDLAYLGGSWSKTIGSAGEVPLQGDFSAEQ 120

Query: 121 MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD 180
           M+FGVEG+DPDRR KLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFK+LLLDEVTVD
Sbjct: 121 MIFGVEGSDPDRRAKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKILLLDEVTVD 180

Query: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHE 240
           LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEG+LRK+EKLSELHE
Sbjct: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGDLRKIEKLSELHE 240

Query: 241 LKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           LK S NLLSVVE+WLRSETK+EKKKP  T T NQKSSGFDASPFRSSRHMAYYR
Sbjct: 241 LKTSNNLLSVVESWLRSETKIEKKKPATTATQNQKSSGFDASPFRSSRHMAYYR 292

[Close]

BLAST of Spo09041.1 vs. NCBI nr
Match: gi|297744168|emb|CBI37138.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 481.9 bits (1239), Expect = 8.100e-133
Identity = 238/287 (82.93%), Postives = 261/287 (90.94%), Query Frame = 1


		  
Query: 9   SGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMV 68
           S +SS+SIKV  +QFAY GQPP+F+DF+LQI+PGSRCLLVGANGSGKTTLL+ILAGKHMV
Sbjct: 5   SSSSSNSIKVNGLQFAYEGQPPLFLDFNLQISPGSRCLLVGANGSGKTTLLRILAGKHMV 64

Query: 69  GGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGT 128
           GGRDVVQVLN SAFHDTHLVC GDL+YLGGSWSK IG AG+VPLQGD SAE M+FGVEG 
Sbjct: 65  GGRDVVQVLNCSAFHDTHLVCSGDLSYLGGSWSKNIGSAGEVPLQGDFSAEHMIFGVEGI 124

Query: 129 DPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMD 188
           +P RRDKL++LLDIDLQWRMHKVSDGQRRRVQICMGLLHPF+VLLLDEVTVDLDVVARMD
Sbjct: 125 NPVRRDKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARMD 184

Query: 189 LLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLL 248
           LLEF KEECDQRGATIVYATHIFDGLETWAT LAY+QEG+LRK+EKLSEL ELK S NLL
Sbjct: 185 LLEFFKEECDQRGATIVYATHIFDGLETWATDLAYVQEGDLRKIEKLSELDELKTSANLL 244

Query: 249 SVVEAWLRSETKLEKKKPVATITNNQKS-SGFDASPFRSSRHMAYYR 295
           SVVE+WLRSETK EKKKP+      Q++ S FD+SPFRSSRHMAYYR
Sbjct: 245 SVVESWLRSETKCEKKKPINPPAQIQRTPSPFDSSPFRSSRHMAYYR 291

[Close]

BLAST of Spo09041.1 vs. NCBI nr
Match: gi|731396093|ref|XP_002276857.2| (PREDICTED: ABC transporter I family member 19 [Vitis vinifera])

HSP 1 Score: 481.9 bits (1239), Expect = 8.100e-133
Identity = 238/287 (82.93%), Postives = 261/287 (90.94%), Query Frame = 1


		  
Query: 9   SGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMV 68
           S +SS+SIKV  +QFAY GQPP+F+DF+LQI+PGSRCLLVGANGSGKTTLL+ILAGKHMV
Sbjct: 24  SSSSSNSIKVNGLQFAYEGQPPLFLDFNLQISPGSRCLLVGANGSGKTTLLRILAGKHMV 83

Query: 69  GGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGT 128
           GGRDVVQVLN SAFHDTHLVC GDL+YLGGSWSK IG AG+VPLQGD SAE M+FGVEG 
Sbjct: 84  GGRDVVQVLNCSAFHDTHLVCSGDLSYLGGSWSKNIGSAGEVPLQGDFSAEHMIFGVEGI 143

Query: 129 DPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMD 188
           +P RRDKL++LLDIDLQWRMHKVSDGQRRRVQICMGLLHPF+VLLLDEVTVDLDVVARMD
Sbjct: 144 NPVRRDKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARMD 203

Query: 189 LLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLL 248
           LLEF KEECDQRGATIVYATHIFDGLETWAT LAY+QEG+LRK+EKLSEL ELK S NLL
Sbjct: 204 LLEFFKEECDQRGATIVYATHIFDGLETWATDLAYVQEGDLRKIEKLSELDELKTSANLL 263

Query: 249 SVVEAWLRSETKLEKKKPVATITNNQKS-SGFDASPFRSSRHMAYYR 295
           SVVE+WLRSETK EKKKP+      Q++ S FD+SPFRSSRHMAYYR
Sbjct: 264 SVVESWLRSETKCEKKKPINPPAQIQRTPSPFDSSPFRSSRHMAYYR 310

[Close]

BLAST of Spo09041.1 vs. NCBI nr
Match: gi|1009147169|ref|XP_015891270.1| (PREDICTED: ABC transporter I family member 19 [Ziziphus jujuba])

HSP 1 Score: 477.2 bits (1227), Expect = 2.000e-131
Identity = 236/283 (83.39%), Postives = 255/283 (90.11%), Query Frame = 1


		  
Query: 12  SSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMVGGR 71
           SSSSIKV  MQF+Y GQ P+F DF+L I+PGSRCLLVGANGSGKTTLLKILAGKHMVG R
Sbjct: 18  SSSSIKVYGMQFSYDGQTPLFADFNLDISPGSRCLLVGANGSGKTTLLKILAGKHMVGER 77

Query: 72  DVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGTDPD 131
           DVV+VLN SAFHDTHLVC GDLAYLGGSWSKT+G AG++PLQGD SAE M+FGVEG DP 
Sbjct: 78  DVVRVLNYSAFHDTHLVCSGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGADPV 137

Query: 132 RRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLE 191
           RRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLE
Sbjct: 138 RRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLE 197

Query: 192 FLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLLSVV 251
           F KEECDQRGATIVYATHIFDGLETWATHLAYIQ+G+LR+ EKLSE++ELKNS NLLSVV
Sbjct: 198 FFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGDLRRAEKLSEVNELKNSANLLSVV 257

Query: 252 EAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           E+WLRSE K EKKKP+   +  +K+S F  SPF SSRHMAYYR
Sbjct: 258 ESWLRSEIKHEKKKPINPPSQIRKTSPFGTSPFVSSRHMAYYR 300

[Close]

BLAST of Spo09041.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RKV0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_055270 PE=4 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 1.200e-164
Identity = 293/294 (99.66%), Postives = 294/294 (100.00%), Query Frame = 1


		  
Query: 1   MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK 60
           MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK
Sbjct: 1   MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK 60

Query: 61  ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ 120
           ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ
Sbjct: 61  ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ 120

Query: 121 MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD 180
           MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD
Sbjct: 121 MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD 180

Query: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHE 240
           LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEK+SELHE
Sbjct: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKMSELHE 240

Query: 241 LKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           LKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR
Sbjct: 241 LKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 294

[Close]

BLAST of Spo09041.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FN45_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g039560 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 5.300e-147
Identity = 265/294 (90.14%), Postives = 275/294 (93.54%), Query Frame = 1


		  
Query: 1   MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK 60
           MVQE  NV   SS+SIKVQAMQFAYPGQPPIF DFSL I+ GSRCLLVGANGSGKTTLLK
Sbjct: 1   MVQEMKNVE--SSTSIKVQAMQFAYPGQPPIFADFSLDISAGSRCLLVGANGSGKTTLLK 60

Query: 61  ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ 120
           ILAGKHMVGGRDVVQVLNSSAFHDT LVC GDLAYLGGSWSKTIG AG+VPLQGD SAEQ
Sbjct: 61  ILAGKHMVGGRDVVQVLNSSAFHDTRLVCSGDLAYLGGSWSKTIGSAGEVPLQGDFSAEQ 120

Query: 121 MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD 180
           M+FGVEG+DPDRR KLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFK+LLLDEVTVD
Sbjct: 121 MIFGVEGSDPDRRAKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKILLLDEVTVD 180

Query: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHE 240
           LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEG+LRK+EKLSELHE
Sbjct: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGDLRKIEKLSELHE 240

Query: 241 LKNSTNLLSVVEAWLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           LK S NLLSVVE+WLRSETK+EKKKP  T T NQKSSGFDASPFRSSRHMAYYR
Sbjct: 241 LKTSNNLLSVVESWLRSETKIEKKKPATTATQNQKSSGFDASPFRSSRHMAYYR 292

[Close]

BLAST of Spo09041.1 vs. UniProtKB/TrEMBL
Match: D7U321_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g03680 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 5.700e-133
Identity = 238/287 (82.93%), Postives = 261/287 (90.94%), Query Frame = 1


		  
Query: 9   SGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMV 68
           S +SS+SIKV  +QFAY GQPP+F+DF+LQI+PGSRCLLVGANGSGKTTLL+ILAGKHMV
Sbjct: 5   SSSSSNSIKVNGLQFAYEGQPPLFLDFNLQISPGSRCLLVGANGSGKTTLLRILAGKHMV 64

Query: 69  GGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGT 128
           GGRDVVQVLN SAFHDTHLVC GDL+YLGGSWSK IG AG+VPLQGD SAE M+FGVEG 
Sbjct: 65  GGRDVVQVLNCSAFHDTHLVCSGDLSYLGGSWSKNIGSAGEVPLQGDFSAEHMIFGVEGI 124

Query: 129 DPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMD 188
           +P RRDKL++LLDIDLQWRMHKVSDGQRRRVQICMGLLHPF+VLLLDEVTVDLDVVARMD
Sbjct: 125 NPVRRDKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARMD 184

Query: 189 LLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLL 248
           LLEF KEECDQRGATIVYATHIFDGLETWAT LAY+QEG+LRK+EKLSEL ELK S NLL
Sbjct: 185 LLEFFKEECDQRGATIVYATHIFDGLETWATDLAYVQEGDLRKIEKLSELDELKTSANLL 244

Query: 249 SVVEAWLRSETKLEKKKPVATITNNQKS-SGFDASPFRSSRHMAYYR 295
           SVVE+WLRSETK EKKKP+      Q++ S FD+SPFRSSRHMAYYR
Sbjct: 245 SVVESWLRSETKCEKKKPINPPAQIQRTPSPFDSSPFRSSRHMAYYR 291

[Close]

BLAST of Spo09041.1 vs. UniProtKB/TrEMBL
Match: B9H8P6_POPTR (ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0005s24830g PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.400e-130
Identity = 229/274 (83.58%), Postives = 251/274 (91.61%), Query Frame = 1


		  
Query: 21  MQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVVQVLNSS 80
           MQFAYPGQ P+F +F+L I+PGSRCLLVGANGSGKTTLLKI+AGKHMVGGRDVV+V+N S
Sbjct: 1   MQFAYPGQHPLFYEFNLNISPGSRCLLVGANGSGKTTLLKIMAGKHMVGGRDVVRVINGS 60

Query: 81  AFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGTDPDRRDKLIELL 140
           AFHDT LVC GDLAYLGGSWSKT+G AG++PLQGD SAE M+FGVEGTDP RR+KLIELL
Sbjct: 61  AFHDTQLVCSGDLAYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGTDPVRREKLIELL 120

Query: 141 DIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFLKEECDQR 200
           DIDL+WRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEF KEECDQR
Sbjct: 121 DIDLKWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFKEECDQR 180

Query: 201 GATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLLSVVEAWLRSETK 260
           GATIVYATHIFDGLETWATHLAYIQ+GEL++V+KL+E+HELKNS  LLSVVE+WLRSETK
Sbjct: 181 GATIVYATHIFDGLETWATHLAYIQDGELKRVKKLTEVHELKNSATLLSVVESWLRSETK 240

Query: 261 LEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
            EKKKP      NQK+S F +SPF SSRHMAYYR
Sbjct: 241 NEKKKPTNPPAQNQKTSPFGSSPFMSSRHMAYYR 274

[Close]

BLAST of Spo09041.1 vs. UniProtKB/TrEMBL
Match: F5A834_CAMSI (ABC transporter family protein OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 4.500e-130
Identity = 230/281 (81.85%), Postives = 252/281 (89.68%), Query Frame = 1


		  
Query: 14  SSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDV 73
           SSI+V  MQF Y GQ P+F+DF+L+I PGSRCLLVGANGSGKTTLLKILAGKHMVGGRDV
Sbjct: 7   SSIEVSGMQFGYDGQSPVFIDFTLKILPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDV 66

Query: 74  VQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGTDPDRR 133
           V+VLN SAFHDTHLVC GDL+YLGGSWSKT+G AG++PLQGD SAE M+FGVEG DP RR
Sbjct: 67  VRVLNCSAFHDTHLVCSGDLSYLGGSWSKTVGSAGEIPLQGDFSAEHMIFGVEGVDPVRR 126

Query: 134 DKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFL 193
           +KLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPF+VLLLDEVTVDLDVVAR+DLL+F 
Sbjct: 127 EKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFQVLLLDEVTVDLDVVARLDLLDFF 186

Query: 194 KEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLLSVVEA 253
           KEEC+QRGATIVYATHIFDGLETWAT LAYI  GEL++ +KLSEL ELKNS NLLSVVE+
Sbjct: 187 KEECEQRGATIVYATHIFDGLETWATDLAYIHAGELKRTDKLSELGELKNSANLLSVVES 246

Query: 254 WLRSETKLEKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           WLRSET  EKKKP      NQK+S FD+SPFRSSRHMAYYR
Sbjct: 247 WLRSETNTEKKKPTNPPVENQKTSPFDSSPFRSSRHMAYYR 287

[Close]

BLAST of Spo09041.1 vs. ExPASy Swiss-Prot
Match: AB19I_ARATH (ABC transporter I family member 19 OS=Arabidopsis thaliana GN=ABCI19 PE=2 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.400e-124
Identity = 226/296 (76.35%), Postives = 255/296 (86.15%), Query Frame = 1


		  
Query: 1   MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK 60
           M +++   SG+ +  I+V  MQFAY  + PIF DF+L +  GSRCLLVGANGSGKTTLLK
Sbjct: 1   MAEKDATASGDDA--IRVSGMQFAYEVEDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLK 60

Query: 61  ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ 120
           ILAGKHMVGG++VVQVL+ SAFHDT LVC GDL+YLGGSWSKT+G AG+VPLQGD SAE 
Sbjct: 61  ILAGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAGEVPLQGDFSAEH 120

Query: 121 MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD 180
           M+FGVEGTDP RR+KLI+LLDI+LQWRMHKVSDGQ+RRVQICMGLLHPFKVLLLDEVTVD
Sbjct: 121 MIFGVEGTDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVD 180

Query: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHE 240
           LDVVARMDLLEF KEECDQRGATIVYATHIFDGLETWATHLAYIQ+GEL ++ K++++ E
Sbjct: 181 LDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIEE 240

Query: 241 LKNSTNLLSVVEAWLRSETKL--EKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           LK S NLLSVVE+WLRSE KL  +KKKPVA      K S FD SPFRSSRHMAYYR
Sbjct: 241 LKTSPNLLSVVESWLRSEIKLVKKKKKPVAP----WKPSPFDNSPFRSSRHMAYYR 290

[Close]

BLAST of Spo09041.1 vs. ExPASy Swiss-Prot
Match: AB21I_ARATH (ABC transporter I family member 21 OS=Arabidopsis thaliana GN=ABCI21 PE=2 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 3.300e-118
Identity = 217/283 (76.68%), Postives = 237/283 (83.75%), Query Frame = 1


		  
Query: 15  SIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVV 74
           +I+V  MQF+Y  Q PIF DF+L +  GSRCLLVGANGSGKTTLLKILAGKHMVGG++VV
Sbjct: 12  AIRVSGMQFSYDVQDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVV 71

Query: 75  QVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGTDPDRRD 134
           QVL+ SAFHDT LVC GDL+YLGGSWSKT G AGD+PLQGD SAE M+FGVEG DP RR+
Sbjct: 72  QVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAGDIPLQGDFSAEHMIFGVEGIDPFRRE 131

Query: 135 KLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFLK 194
           KLI+LLDI+LQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEF K
Sbjct: 132 KLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFK 191

Query: 195 EECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLLSVVEAW 254
           EEC+QRGATIVYATHIFDGLETWA+HLAYI  GEL+   KL E+ +LK S NLLSVVEAW
Sbjct: 192 EECEQRGATIVYATHIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSVVEAW 251

Query: 255 LRSETKLE---KKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           LRSETK+E   KKKPV T            SPF SSR MAYYR
Sbjct: 252 LRSETKVEKKTKKKPVVT------------SPFMSSRQMAYYR 282

[Close]

BLAST of Spo09041.1 vs. ExPASy Swiss-Prot
Match: AB20I_ARATH (ABC transporter I family member 20 OS=Arabidopsis thaliana GN=ABCI20 PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.900e-81
Identity = 149/262 (56.87%), Postives = 196/262 (74.81%), Query Frame = 1


		  
Query: 13  SSSIKVQAMQFAYPG--------QPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAG 72
           +S++++  ++F YPG          P+  DFS+ +    RCLLVG+NG+GKTT+LKIL G
Sbjct: 11  NSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGG 70

Query: 73  KHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAG-DVPLQGDISAEQMLF 132
           KHMV    +V+VL  SAFHDT L   GDL YLGG W + +  AG +VP+Q DISAE+M+F
Sbjct: 71  KHMVEPH-MVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIF 130

Query: 133 GVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDV 192
           GV G DP RRD+LI++LDID+ WR+HKVSDGQRRRVQICMGLL PFKVLLLDE+TVDLDV
Sbjct: 131 GVAGIDPQRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDV 190

Query: 193 VARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKN 252
           +AR DLL+FL++EC++RGATI+YATHIFDGLE W TH+ Y+  G+L+    + ++ E  +
Sbjct: 191 LARADLLKFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPMEKVKE-TS 250

Query: 253 STNLLSVVEAWLRSETKLEKKK 266
             +L+  VE+WLR E   E+K+
Sbjct: 251 KKSLMRTVESWLRKERDEERKR 270

[Close]

BLAST of Spo09041.1 vs. ExPASy Swiss-Prot
Match: YE31_SCHPO (Uncharacterized ABC transporter ATP-binding protein C20G4.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC20G4.01 PE=3 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 2.500e-49
Identity = 119/259 (45.95%), Postives = 160/259 (61.78%), Query Frame = 1


		  
Query: 16  IKVQAMQFAYPGQPPIFVDF-SLQIAPGSRCLLVGANGSGKTTLLKILAGKHM------- 75
           + V  + + +  + P+ +D  +L +  GSR LLVGANG+GK+TLLK+L+GK +       
Sbjct: 3   VTVSNLSYTFSPKQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHIS 62

Query: 76  VGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEG 135
           VGG+D  +  +SSAF            YLG  W        +  +  D+S  +++  V G
Sbjct: 63  VGGKDPFRE-SSSAF-----------VYLGTEW------VNNPVIHRDMSVARLIASVGG 122

Query: 136 TD-PDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVAR 195
               +RRD LI +LDIDL+WRMH VSDG+RRRVQ+CMGLL PF+VLLLDEVTVDLDV+AR
Sbjct: 123 DKFAERRDFLISILDIDLRWRMHAVSDGERRRVQLCMGLLRPFEVLLLDEVTVDLDVLAR 182

Query: 196 MDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHEL--KNS 255
            DLL FL+EE + R ATIVYATHIFDGL  W THL ++  G +     +S+   L  ++S
Sbjct: 183 ADLLNFLQEETEVRNATIVYATHIFDGLAEWPTHLVHLSLGRIVDYGPISKFGALMTRSS 242

Query: 256 TN---LLSVVEAWLRSETK 261
           T    LL     WL+ + K
Sbjct: 243 TGNSALLETCLEWLKEDKK 243

[Close]

BLAST of Spo09041.1 vs. ExPASy Swiss-Prot
Match: CAF16_YEAST (CCR4-associated factor 16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAF16 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.300e-41
Identity = 100/232 (43.10%), Postives = 144/232 (62.07%), Query Frame = 1


		  
Query: 12  SSSSIKVQAMQFAYP-GQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHM--- 71
           S  +I+V+ + + +     P  VD +LQI   +R L+VGANG+GK+TLLK+L+GKH+   
Sbjct: 3   SQFAIEVRNLTYKFKESSDPSVVDINLQIPWNTRSLVVGANGAGKSTLLKLLSGKHLCLD 62

Query: 72  ----VGGRDVVQVLNSSAFHDTHLVCGGD----LAYLGGSWSKTIGCAGDVPLQGDISAE 131
               V G D    L+ +   D   V          YLG  W     C   + +  DI   
Sbjct: 63  GKILVNGLDPFSPLSMNQVDDDESVEDSTNYQTTTYLGTEW-----CHMSI-INRDIGVL 122

Query: 132 QMLFGVEGTDP--DRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEV 191
           ++L  + G D   +R ++L+ +LDID++WRMH++SDGQ+RRVQ+ MGLL P++VLLLDEV
Sbjct: 123 ELLKSI-GFDHFRERGERLVRILDIDVRWRMHRLSDGQKRRVQLAMGLLKPWRVLLLDEV 182

Query: 192 TVDLDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGEL 230
           TVDLDV+AR  LLEFLK E + R  ++VYATHIFDGL  W   + +++ G++
Sbjct: 183 TVDLDVIARARLLEFLKWETETRRCSVVYATHIFDGLAKWPNQVYHMKSGKI 227

[Close]

BLAST of Spo09041.1 vs. TAIR (Arabidopsis)
Match: AT1G03905.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 447.2 bits (1149), Expect = 7.800e-126
Identity = 226/296 (76.35%), Postives = 255/296 (86.15%), Query Frame = 1


		  
Query: 1   MVQENGNVSGNSSSSIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLK 60
           M +++   SG+ +  I+V  MQFAY  + PIF DF+L +  GSRCLLVGANGSGKTTLLK
Sbjct: 1   MAEKDATASGDDA--IRVSGMQFAYEVEDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLK 60

Query: 61  ILAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQ 120
           ILAGKHMVGG++VVQVL+ SAFHDT LVC GDL+YLGGSWSKT+G AG+VPLQGD SAE 
Sbjct: 61  ILAGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAGEVPLQGDFSAEH 120

Query: 121 MLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVD 180
           M+FGVEGTDP RR+KLI+LLDI+LQWRMHKVSDGQ+RRVQICMGLLHPFKVLLLDEVTVD
Sbjct: 121 MIFGVEGTDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVD 180

Query: 181 LDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHE 240
           LDVVARMDLLEF KEECDQRGATIVYATHIFDGLETWATHLAYIQ+GEL ++ K++++ E
Sbjct: 181 LDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNRLSKMTDIEE 240

Query: 241 LKNSTNLLSVVEAWLRSETKL--EKKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           LK S NLLSVVE+WLRSE KL  +KKKPVA      K S FD SPFRSSRHMAYYR
Sbjct: 241 LKTSPNLLSVVESWLRSEIKLVKKKKKPVAP----WKPSPFDNSPFRSSRHMAYYR 290

[Close]

BLAST of Spo09041.1 vs. TAIR (Arabidopsis)
Match: AT5G44110.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 426.0 bits (1094), Expect = 1.900e-119
Identity = 217/283 (76.68%), Postives = 237/283 (83.75%), Query Frame = 1


		  
Query: 15  SIKVQAMQFAYPGQPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAGKHMVGGRDVV 74
           +I+V  MQF+Y  Q PIF DF+L +  GSRCLLVGANGSGKTTLLKILAGKHMVGG++VV
Sbjct: 12  AIRVSGMQFSYDVQDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLKILAGKHMVGGKNVV 71

Query: 75  QVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGDISAEQMLFGVEGTDPDRRD 134
           QVL+ SAFHDT LVC GDL+YLGGSWSKT G AGD+PLQGD SAE M+FGVEG DP RR+
Sbjct: 72  QVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAGDIPLQGDFSAEHMIFGVEGIDPFRRE 131

Query: 135 KLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFLK 194
           KLI+LLDI+LQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEF K
Sbjct: 132 KLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFFK 191

Query: 195 EECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSELHELKNSTNLLSVVEAW 254
           EEC+QRGATIVYATHIFDGLETWA+HLAYI  GEL+   KL E+ +LK S NLLSVVEAW
Sbjct: 192 EECEQRGATIVYATHIFDGLETWASHLAYINGGELKLSAKLDEIKDLKTSPNLLSVVEAW 251

Query: 255 LRSETKLE---KKKPVATITNNQKSSGFDASPFRSSRHMAYYR 295
           LRSETK+E   KKKPV T            SPF SSR MAYYR
Sbjct: 252 LRSETKVEKKTKKKPVVT------------SPFMSSRQMAYYR 282

[Close]

BLAST of Spo09041.1 vs. TAIR (Arabidopsis)
Match: AT5G02270.2 (non-intrinsic ABC protein 9)

HSP 1 Score: 290.8 bits (743), Expect = 9.400e-79
Identity = 150/288 (52.08%), Postives = 196/288 (68.06%), Query Frame = 1


		  
Query: 13  SSSIKVQAMQFAYPG--------QPPIFVDFSLQIAPGSRCLLVGANGSGKTTLLKILAG 72
           +S++++  ++F YPG          P+  DFS+ +    RCLLVG+NG+GKTT+LKIL G
Sbjct: 11  NSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGKTTILKILGG 70

Query: 73  KHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAG-DVPLQGDISAEQMLF 132
           KHMV    +V+VL  SAFHDT L   GDL YLGG W + +  AG +VP+Q DISAE+M+F
Sbjct: 71  KHMVEPH-MVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMDISAEKMIF 130

Query: 133 GVEGTDPDRRDKLIEL--------------------------LDIDLQWRMHKVSDGQRR 192
           GV G DP RRD+LI+L                          LDID+ WR+HKVSDGQRR
Sbjct: 131 GVAGIDPQRRDELIKLEHGLIFDLCHIPNLRALHCLEYYYSVLDIDISWRLHKVSDGQRR 190

Query: 193 RVQICMGLLHPFKVLLLDEVTVDLDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETW 252
           RVQICMGLL PFKVLLLDE+TVDLDV+AR DLL+FL++EC++RGATI+YATHIFDGLE W
Sbjct: 191 RVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDW 250

Query: 253 ATHLAYIQEGELRKVEKLSELHELKNSTNLLSVVEAWLRSETKLEKKK 266
            TH+ Y+  G+L+    + ++ E  +  +L+  VE+WLR E   E+K+
Sbjct: 251 PTHIVYVANGKLQLALPMEKVKE-TSKKSLMRTVESWLRKERDEERKR 296

[Close]

BLAST of Spo09041.1 vs. TAIR (Arabidopsis)
Match: AT1G02530.1 (P-glycoprotein 12)

HSP 1 Score: 65.5 bits (158), Expect = 6.400e-11
Identity = 69/254 (27.17%), Postives = 112/254 (44.09%), Query Frame = 1


		  
Query: 5   NGNVSGNSSSSIKVQAMQFAYPGQPP--IFVDFSLQIAPGSRCLLVGANGSGKTTLLKIL 64
           NG V G+    I+++ + F+YP +P   IF  FSL I  G+   LVG +GSGK+T++ ++
Sbjct: 357 NGKVLGDIRGDIELKDVHFSYPARPDEEIFDGFSLFIPSGATAALVGESGSGKSTVINLI 416

Query: 65  -------AGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAYLGGSWSKTIGCAGDVPLQGD 124
                  AG+ ++ G ++ +           LVC   + +             +  LQ  
Sbjct: 417 ERFYDPKAGEVLIDGINLKEFQLKWIRSKIGLVCQEPVLFSSSIMENIAYGKENATLQEI 476

Query: 125 ISAEQMLFGVEGTDPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLD 184
             A ++    +  +      L + LD  +     ++S GQ++R+ I   +L   +VLLLD
Sbjct: 477 KVATELANAAKFIN-----NLPQGLDTKVGEHGTQLSGGQKQRIAIARAILKDPRVLLLD 536

Query: 185 EVTVDLDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKL 244
           E T  LD  +   + E L      R  T V   H    +   A  +A I  G++  VEK 
Sbjct: 537 EATSALDTESERVVQEALDRVMVNR--TTVVVAHRLSTVRN-ADMIAVIHSGKM--VEKG 596

Query: 245 SELHELKNSTNLLS 250
           S    LK+S    S
Sbjct: 597 SHSELLKDSVGAYS 600

[Close]

BLAST of Spo09041.1 vs. TAIR (Arabidopsis)
Match: AT5G39040.1 (transporter associated with antigen processing protein 2)

HSP 1 Score: 64.3 bits (155), Expect = 1.400e-10
Identity = 67/252 (26.59%), Postives = 113/252 (44.84%), Query Frame = 1


		  
Query: 10  GNSSSSIKVQAMQFAYPGQPP--IFVDFSLQIAPGSRCLLVGANGSGKTTLLKI------ 69
           GN    +++  + FAYP +P   I    SL++ PGS+  LVG +G GKTT+  +      
Sbjct: 390 GNPDGDVELNDVWFAYPSRPSHMILKGISLRLTPGSKVALVGPSGGGKTTIANLIERFYD 449

Query: 70  -LAGKHMVGGRDVVQVLNSSAFHDTHLVCGGDLAY-LGGSWSKTIGCAGDVPLQGDISAE 129
            L GK ++ G  ++++ +        +V    + +      +   G  G+       +A 
Sbjct: 450 PLKGKILLNGVSLMEISHQYLHKQISIVSQEPILFNCSVEENIAYGFDGEASFTDIENAA 509

Query: 130 QMLFGVEGTD--PDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEV 189
           +M    E  +  PD+ + ++         R  ++S GQ++R+ I   LL    VLLLDE 
Sbjct: 510 KMANAHEFIEAFPDKYNTVV-------GERGLRLSGGQKQRIAIARALLTNPSVLLLDEA 569

Query: 190 TVDLDVVARMDLLEFLKEECDQRGATIVYATHIFDGLETWATHLAYIQEGELRKVEKLSE 249
           T  LD  A  + L     +    G T++   H    ++T A  +A I +GE+ +     E
Sbjct: 570 TSALD--AESEYLVQDAMDSLMAGRTVLVIAHRLSTVKT-ADCVAVISDGEVAEKGTHDE 629

The following BLAST results are available for this feature:

BLAST of Spo09041.1 vs. NCBI nr
BLAST of Spo09041.1 vs. UniProtKB/TrEMBL
BLAST of Spo09041.1 vs. ExPASy Swiss-Prot
BLAST of Spo09041.1 vs. TAIR (Arabidopsis)

BLAST of Spo09041.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902225582\|gb\|KNA20110.1\|	1.8e-164	99.6	hypothetical protein SOVF_0552...	[more]
gi\|731319238\|ref\|XP_010670153.1\|	7.6e-147	90.1	PREDICTED: ABC transporter I f...	[more]
gi\|297744168\|emb\|CBI37138.3\|	8.1e-133	82.9	unnamed protein product [Vitis...	[more]
gi\|731396093\|ref\|XP_002276857.2\|	8.1e-133	82.9	PREDICTED: ABC transporter I f...	[more]
gi\|1009147169\|ref\|XP_015891270.1\|	2.0e-131	83.3	PREDICTED: ABC transporter I f...	[more]

BLAST of Spo09041.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RKV0_SPIOL	1.2e-164	99.6	Uncharacterized protein OS=Spi...	[more]
A0A0J8FN45_BETVU	5.3e-147	90.1	Uncharacterized protein OS=Bet...	[more]
D7U321_VITVI	5.7e-133	82.9	Putative uncharacterized prote...	[more]
B9H8P6_POPTR	3.4e-130	83.5	ABC transporter family protein...	[more]
F5A834_CAMSI	4.5e-130	81.8	ABC transporter family protein...	[more]

BLAST of Spo09041.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
AB19I_ARATH	1.4e-124	76.3	ABC transporter I family membe...	[more]
AB21I_ARATH	3.3e-118	76.6	ABC transporter I family membe...	[more]
AB20I_ARATH	1.9e-81	56.8	ABC transporter I family membe...	[more]
YE31_SCHPO	2.5e-49	45.9	Uncharacterized ABC transporte...	[more]
CAF16_YEAST	4.3e-41	43.1	CCR4-associated factor 16 OS=S...	[more]

BLAST of Spo09041.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT1G03905.1	7.8e-126	76.3	P-loop containing nucleoside t...	[more]
AT5G44110.1	1.9e-119	76.6	P-loop containing nucleoside t...	[more]
AT5G02270.2	9.4e-79	52.0	non-intrinsic ABC protein 9	[more]
AT1G02530.1	6.4e-11	27.1	P-glycoprotein 12	[more]
AT5G39040.1	1.4e-10	26.5	transporter associated with an...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 34..178 score: 3.2
IPR003439	ABC transporter-like	PROFILE	PS50893	ABC_TRANSPORTER_2	coord: 16..251 score: 1
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 41..227 score: 1.
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 11..80 score: 1.4E-32coord: 132..244 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 15..245 score: 4.93
None	No IPR available	PANTHER	PTHR12847	ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED	coord: 1..294 score: 3.5E
None	No IPR available	PANTHER	PTHR12847:SF6	ABC TRANSPORTER I FAMILY MEMBER 19-RELATED	coord: 1..294 score: 3.5E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding